NO23G01100, NO23G01100 (gene) Nannochloropsis oceanica

Overview
NameNO23G01100
Unique NameNO23G01100
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1596
Alignment locationchr23:403002..404597 -

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr23genomechr23:403002..404597 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO23G01100 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL034nonsL034Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR039ncniR039Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR047ngnoR047Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO23G01100.1NO23G01100.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|655844gene_8463Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO23G01100.1NO23G01100.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO23G01100 ID=NO23G01100|Name=NO23G01100|organism=Nannochloropsis oceanica|type=gene|length=1596bp
ATGAATTCCCCAGAACGCTGCCGTCGTCGCCTCTTCTCCTCAATACTCCT
ACTTTTTCTTGAGCTCATATTTCCCAAACCCACAACGAGCTTCCTCCCTG
CTCCGCTGCACAGCCGCAACAGTTGCAGCACTCTTTATCAAAGCGTTTCC
CCCAATCAACAAAACGACCGCTCCGAAGCAAGCGCGCCAACATCCTTGTG
GCAGCGCCTTTTCCAATCCACACCCAGGCGTTCGAGGGAATATGAAGAAG
AGCTTGAAGCAGTTGCAACCCAGGTAAAATACCTGGAGCAGCAGCACCGA
TCAGAGTTGGCTAGTTTTCGACAGAAACTGGAAGAGCAGTGGCAGGAACA
GCAATCCAATAAGTGGAAGGCGTTACCCTACGCGGGCACGTGGACAGTGG
AATTGACAGGAGGGAATTACGTGCATTGCACCCCAATCTTCAACCTGGGA
GGCCTCTGGTTTCGCTTAGTGCTGACTGAGAAGATAGCACAAAATTGCAA
AGGCCCTATTCGAGGGAAATATTCGCCAAGGGTGGAAGCAAGGGAGGGCG
AGGGCGGGCGACCTGTTGGGGTATTCGTTGAGTATTTGCCATCATCCAGC
ACCGGAGAAGGAGGAGCAGCAGCAACAGCAGTGCCTTGCTTGCGGTGTCG
CTTCGAGCTGCTCAATGACTTGAAGGAAAATTGTCAGATTGAGAAGGAGG
AAGGGGAGTTGGCGGAGTGTGAGTCAGAGCCTACATTTCTGAATGCCGCC
GGAGGAGCTTTAGGTGTCCCTCACTTCACGGACGTCTGCGACCACCCTCC
TCCTCCCCTTCCTCTTCCTCTTTCTCGCTTTCAACAGCTACAACAGCCAG
AAGGACAAGAGCAGCAGCCATCAAAAGTACTTGTCGGATTTGAGATTTCT
CTATGCGCCGTAAAGTTTTTAAGTGTTACTGAACAAGCGCAAGCTATGAG
GGAGGCATGGGTGAGGACGGAGGCAGCAGTGGAGGAACAGGTGAGAGCCG
TTCTGGTGAAGGAGGAGGAAAGCAGGGTTACCGCGGAGTTGCATGTGAGA
GAAGCCGGAGAATGGAGGGAAAGGGTGGACATGAGGTTCTTTGACGAAGG
AGGGAGCGGTAGAAGAGGCGGTGGAAAGAGTGGTGAGGAGGAGAAACTTT
TTGTGGAGGATGACAGCGATGAAGAAAGCGACGATGACGATGAGAACAGG
AAGTAGAAAAAGGATGCAAACGATGAGAAAGAGAAGCGTGAAGAGAAGGA
AGGATTACGGACAGGCGCGTGTAATGACGATAAGCGTCATCGTGAGAATA
CGGTTGGCAGGGAGGCAGAGGGAGAAGAGGAGGTGAAACACACGAACAAG
GGCGAGGAGGAGGACGACGAGGACGAGGACGGGATAGAAGAATAATATTA
ATGGATATTAATGAATAGACAAGAAAATCGAAGGTGACGAGGACGTGAAT
AAACAATAGGAAAAGATGAAGGGAGCGTGATAAGTGATAGACCAATAGTG
CGAAAAATTAAAGACCCCGCTTCAGACAAGAGAAGAAAACAAGTAGGACA
TCGAAGGAGGGAAATGAAGTAGCCGAGGAAAGTAATGCAAGGAATA
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protein sequence of NO23G01100.1

>NO23G01100.1-protein ID=NO23G01100.1-protein|Name=NO23G01100.1|organism=Nannochloropsis oceanica|type=polypeptide|length=402bp
MNSPERCRRRLFSSILLLFLELIFPKPTTSFLPAPLHSRNSCSTLYQSVS
PNQQNDRSEASAPTSLWQRLFQSTPRRSREYEEELEAVATQVKYLEQQHR
SELASFRQKLEEQWQEQQSNKWKALPYAGTWTVELTGGNYVHCTPIFNLG
GLWFRLVLTEKIAQNCKGPIRGKYSPRVEAREGEGGRPVGVFVEYLPSSS
TGEGGAAATAVPCLRCRFELLNDLKENCQIEKEEGELAECESEPTFLNAA
GGALGVPHFTDVCDHPPPPLPLPLSRFQQLQQPEGQEQQPSKVLVGFEIS
LCAVKFLSVTEQAQAMREAWVRTEAAVEEQVRAVLVKEEESRVTAELHVR
EAGEWRERVDMRFFDEGGSGRRGGGKSGEEEKLFVEDDSDEESDDDDENR
K*
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Synonyms
Publications