NO23G00300, NO23G00300 (gene) Nannochloropsis oceanica

Overview
NameNO23G00300
Unique NameNO23G00300
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3887
Alignment locationchr23:144074..147960 -

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr23genomechr23:144074..147960 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO23G00300 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniR039ncniR039Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR047ngnoR047Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO23G00300.2NO23G00300.2-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO23G00300.1NO23G00300.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|193820gene_8369Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO23G00300.2NO23G00300.2Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO23G00300.1NO23G00300.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO23G00300 ID=NO23G00300|Name=NO23G00300|organism=Nannochloropsis oceanica|type=gene|length=3887bp
ACAGGGAAACTCCACAGCATTTTTTTCCGACAATATACGGCAGGTAGAGC
CAGGCGTGACAACAGCACCACCATAATCGCGTAGAAGCCTCTTAGCACCG
GCACCAGCAACGGCACCAGCAACAGCACCAGCGACAGCACCAGCGACAGC
ATCAGCACCGGCAGCACCTCACAATCACCACGTACAAGAAGCACGAGCTA
TTACAACGTGCAACAGTCATTTATGCCCTCCGCTTCTTCCCCTCCCCGGA
AAAGGGCCCGAAAAGCCATCATTCAGCTCCGCCTCAGCACCCAAGCCGCA
GAGCGATTAGAGAGTCTCCTAAGGGAAAACAGGGGGAATGAAATCAAGGC
AGTGGTAGATGAGAGCGGAGgtacgtctatctgtgaagacgaggttggaa
tggggaggggtggaaggtgtaggtaggagaatctcaacacctgagcaacc
gagcgctaggaggggttaaaagcacgagggtggagggaataaagtcgata
catctgggggcggcagcggatccgggtaaagcagaagcaacggagagagg
ggggaagggagagagggaatatggtggggaaggtcgtatcaaaagcccta
accctagccctcagaaacactctcaccctccctccatccatctatccctc
ccttcctccctccccagTCCTCGCCGCCCTGCATCTCGGCTCCGAAGCTT
TCCCCTTGGACAGCAACAAAGAAGAAAATCCAGGCATGGCCGTTCTACTT
TCTCGCCCTCGTCCGGTGCGTCGTTTAGGAGTAGCAGGCAAACTCCCTCC
CTCTTCGCAGGGAGGGAGGGAGGGAGGGGTGGAGGAGGTGGGCTACGTGT
ATGAAAAAGCCTCTGTGGTGGTGACGGCTGTGGAGCAGCAGCAGCAGCAG
CAGCAGCAGCAACACCAGCTTCAGCAGCTGGAGGGAGGAGGGGAGGAAGG
AGGAGGGAGGGAGGGAGGGAGGGAGGGGAAGAGGACGTTGAAGACTGTGG
GTGTGGCTCTGCCGGCGTCGCACCAGGAGCAGCTGGAGAGGAAGCAACGT
CGAAACGgtgagggaggtggggaagggagggagggatgagagagaggggg
gggggggcgcaaaggatgaaggggggcccgccatgagggacggaacaagg
gaagagtggagggaggagggcagggagagagagaaggacagggggagggt
aaattcatcaacgctcttatacattttacttttatttaaatcctccacag
GCGGTCTACTGCCGGATCCGGTGACGCTCAGAGACGATGgttgggaggga
gggagggagggagggagggagggagggagggagggagggagggagggagg
gagggagggaggtggccgatgaagtggttttcgtaccatcgtccgatcat
ctttctttgattttctcttatatactccttccttccttcatttcttcctt
catttcatcattcccttttcattatcacgataatctgtgcagGAAAAGGC
AAAGGGAAAAAAGGCGCTGCTGCTGCTGCTGCTGCTGGTGGTGGCGGTAG
TGGAAGGGCACTCCAAGCTCTGGGATTAAAGGGAGGGAGGGACGTAGGAA
AGAGGGAATTCTGGCTGCAGGCACACATTGCCTCGTGCGACGTGAGCGGA
AAAGAGCTCCGCGAGgtagcgtttctcccccccatctccccttcctactg
tcagatattcattgtgccatattcatatacaaatgcttcttccccctccc
tccctccctccctcccttcctccccagGGCCTCTTTCGAGGCATCAACCT
TCACGCCCAGGATCCGATCCGCTGGCTCCCGTCGGCGGAGGCGCTGGCGG
GGAAAGGCTGTACATTACTTGTCAGgtagggagggagggagggagggaag
gagggagggagggggggggggggagtagggatggagggaagccaataccg
actgtggtaaccaaaaattgctcttcaacatgcttagGTTTGCATCCCCT
CAGATTACGGAGCTCGCCTATCAGAGAAACAACGAGCACATCGTCCTCCC
CGGAGGGCAAGGCCTGgtacgcaccctcccaccctcccttcctccctcct
tccctcccaccctccctccttctctctctccctccctccttccttgcctc
ccttttcccttcatgactctctggctgacccttccctccctccctctctc
tctccctcccttcctccctcccttcctcccaacctcctccctcagATGAC
AGTTCATCTCTCTCCTTGCTCCGAACAGGCGCTGGACGAGGTGCAAGGTT
TCGGTCTTGTCCTCACAGGGCACCGATCTTTAAAGCAGgtaggccctctt
tcccttcctccaaccttccctccctttcctccctcttgacttccctcttg
gcctccctcctgacctccctccctccttcccctagACCCTGAGCTGTCTC
GAGAATGCGCTGTCGTCCACCGTGAAGAACAAGCTCTGGAACGTTTATTC
TCGCCTCCTTCCCTCCCTTCGAAAGGGAGTCCCTCCTCCGGGAAGgtacg
tctttccctatgtcccccctctctccctccctccttccctccctccctcc
ctccctctccgagcctgtgttgtctcaatcacaaacttaatcctccctcc
ttgcctctttccctccttccgtccttccttcccttcttctcttccttccc
tcctctccttctcgccctcctcccctccatcacagCCAGGCCTCTCCCGA
AACATTCTTCCAACAAATCGAGAAGGCCTACCTCAAGCCCCTCGAACAGG
CAGCCCTCTATCTGGCGGCAACCAAAAAACATgtaagatccctccctccc
tccctctctccttccctccctccctccctccctccctcaggcaagtggtt
cgacagtcggttctgcctgtctgctgaaaaaggaaggaaaggagggaggg
cggaaaagaggaagagagagggtggaaggaacagagggaggacaagcgtt
atgagattacagggacgtaattgatttaactctaagacgtatgttctttc
gtctttcacacctacctacttccctttgctatcccctccctccttccctt
ccttccttcattccttcctcagaccctccacccttccagactcttctcat
tccgagcctcgttcggcctcagggagacacaagacacgaaattcctcacc
cctcttttctttccttccttcgttccttcttccctccctccttcccttag
CCCCCTCAGCCCTCAAAGTTCATTGCACCGGAGCTTCGTCCAGCCCCCTC
CGAGGCCGACGTAGCGCTCGCCGCTCTGACAACAGCGCGACGAGGACTGC
AGCGGTGGTTGAGCAAGgtgaggggaggggggaaggggaggcgaaggagg
taggggaggtacgttctgctgggaactcgcatgccctctttaagaactgg
ttcagccatcgatagtgaatcattcatttttctatctcctcttgctttcc
ctccctcctttcctccctctctttctaactctgtcaacagATAAGGAGCA
ACACTGTTGTGCAGTCCTGCCGAGTGCCGGCTATTTTGAGTCATATGCCC
GTGCGACGGGATGGAAACGTGAATAAAACGAGGAAGGACAACGACGAGGA
GCAAGAAGGGAATAAGGGCGAGGGGAATAGTGGAAAAGGGGTAACCGGTG
GCGATGGCGGAGAGGGAAGCGGAAGTGATGGGTCGCTAGAGATTGACCTG
GGATAGTTGATAGAAAGCAAAAAAGTGTTGAGGAAGCATATGTTCTCAAT
GAAATTTGCTCCTTCTGTAGAATGTAACAGTAACAGATTCGTAATTTTAT
GAAGCTTAATGTGAATGATGTTCACACAAGCAAATAC
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protein sequence of NO23G00300.2

>NO23G00300.2-protein ID=NO23G00300.2-protein|Name=NO23G00300.2|organism=Nannochloropsis oceanica|type=polypeptide|length=448bp
MAVLLSRPRPVRRLGVAGKLPPSSQGGREGGVEEVGYVYEKASVVVTAVE
QQQQQQQQQHQLQQLEGGGEEGGGREGGREGKRTLKTVGVALPASHQEQL
ERKQRRNGGLLPDPVTLRDDGKGKGKKGAAAAAAAGGGGSGRALQALGLK
GGRDVGKREFWLQAHIASCDVSGKELREGLFRGINLHAQDPIRWLPSAEA
LAGKGCTLLVRFASPQITELAYQRNNEHIVLPGGQGLMTVHLSPCSEQAL
DEVQGFGLVLTGHRSLKQTLSCLENALSSTVKNKLWNVYSRLLPSLRKGV
PPPGSQASPETFFQQIEKAYLKPLEQAALYLAATKKHPPQPSKFIAPELR
PAPSEADVALAALTTARRGLQRWLSKIRSNTVVQSCRVPAILSHMPVRRD
GNVNKTRKDNDEEQEGNKGEGNSGKGVTGGDGGEGSGSDGSLEIDLG*
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protein sequence of NO23G00300.1

>NO23G00300.1-protein ID=NO23G00300.1-protein|Name=NO23G00300.1|organism=Nannochloropsis oceanica|type=polypeptide|length=520bp
MPSASSPPRKRARKAIIQLRLSTQAAERLESLLRENRGNEIKAVVDESGV
LAALHLGSEAFPLDSNKEENPGMAVLLSRPRPVRRLGVAGKLPPSSQGGR
EGGVEEVGYVYEKASVVVTAVEQQQQQQQQQHQLQQLEGGGEEGGGREGG
REGKRTLKTVGVALPASHQEQLERKQRRNGGLLPDPVTLRDDGKGKGKKG
AAAAAAAGGGGSGRALQALGLKGGRDVGKREFWLQAHIASCDVSGKELRE
GLFRGINLHAQDPIRWLPSAEALAGKGCTLLVRFASPQITELAYQRNNEH
IVLPGGQGLMTVHLSPCSEQALDEVQGFGLVLTGHRSLKQTLSCLENALS
STVKNKLWNVYSRLLPSLRKGVPPPGSQASPETFFQQIEKAYLKPLEQAA
LYLAATKKHPPQPSKFIAPELRPAPSEADVALAALTTARRGLQRWLSKIR
SNTVVQSCRVPAILSHMPVRRDGNVNKTRKDNDEEQEGNKGEGNSGKGVT
GGDGGEGSGSDGSLEIDLG*
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Synonyms
Publications