NO23G00270, NO23G00270 (gene) Nannochloropsis oceanica

Overview
NameNO23G00270
Unique NameNO23G00270
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1899
Alignment locationchr23:116732..118630 +

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr23genomechr23:116732..118630 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO23G00270 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniR039ncniR039Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR047ngnoR047Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO23G00270.1NO23G00270.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO23G00270.1NO23G00270.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO23G00270 ID=NO23G00270|Name=NO23G00270|organism=Nannochloropsis oceanica|type=gene|length=1899bp
ATGGGAGGCGGTGCGTCCAAGCCGGGGAGCGACATAAGgcaagtcaaggg
ttgtgtttattatatacatagtaggagccagtgcctgtggtgttgagatc
taggagcagcagcactagaattggaagggcgaatgcgagggagggaacga
aggagtcatagtagtcgctaggattgtctcgacccctttccaaccaccct
ccctccctccttccttccctccctccagCCCTCGTACCGTGGAGATTATG
AAGAAATGCGGCGAAGACGTCAATACAGAACTTCGTCGGACAATGGAGAG
GCTGAAGGGGATGAAGGCGGAGTACCAGAGCCATGGCACGgtgagaaaag
gaaggaagagatggagggagggagggagggagggagggagggaaggaagg
aggggagtaggaccttgccactcatgcttttttcttccattcctatgata
tactacaacttgaagATGTTCGGTGTGAAGGAAAGCCCGGAAGCTTTCGC
ATTGgtaagccccatccacccgtccttcctccctttttctctcccctctg
tatgatagtctatactaacctccctccctccctcactccttctctctttc
cccatccccagCGCGATGCATTCGCCCGTCGCATCCTACTCGGGAATGTG
GGAGGGGCGGGTGCGTGTTATATGCTGGCCAGGTATATGACCCGATACGA
TACCACGGTGAAGAGAACGTTCATCCGGGTGGGCTCGCTGgtgaggaaag
gggagggagggaaggagggaggaaggaggagggaagaggagagagaggga
ggaaggcgccagtcagagtgctgtatcaccattttctcacgtactctttc
tctccctccctccctccctccctccctctcagTTTGTGGGGGGGTTCCTC
GGACTCTCCTGGGCCATGGGCACGGGTTTTCCTCCCTTTGCCATAGGCCT
GCTCGACAAGgtgctccctccccccctccctccctctttccctccctccc
tccctcccttcctccctctttccttccttccttgcctccattcctggctc
cctccctccctccctccctccctgcattcacctatccatccatccctccc
tcttcctccctccctccctccctccctccttccctcttttcctccctcca
gTCTCGCTGGGCTCCTCCCCTCCTCTGTCCTGCCCTACGGAAATACAAAC
CATGCATCGATGACGAATATGGCTGTCGGGAGGTGCTCAAAAGCgtacgt
ccctccctccctccctccctccctccctccctccctccctccctccttcc
ctcccattgtccttccaaaactcttacccttccctccctccctctctccc
ttcctttcttccttccttccttccttccttccttcctccagGGCGCAGGT
TCCGGCATGGGCCGCCAGATTATCACCCTCTACGAAATCTGTCAACAGAA
AACAGCGGCGGGCATgtaaggagagaaggagagaagaagggagggaggaa
agggtactataggagaatatttttccagcccaaggccgcactgatgggac
gtagtgaggataggaagggagagagggagggagggagggagggagaaaca
aagactcttgaatagtacatgtgtattctcttctcctcttcatcttctca
tttatacctcttcttgttacaaaatgttatttctgcagGAACACAGGTGG
TGAAGAGAGAGGAGGAAGCGGCGGGGGGGGATGGGGGCAGGGAGGAGGGG
GAGGGGGGGCAGCGATCGAAGAGGAATTCGTGTCGATGGAGGATCCAGAG
AAGGTGGATGGGGGTGATTTTGAGCTGCCGGGGTTCGAGGAGGAGGAGGA
GAAAAAGGCAGAGGGCGTCTTTGGAATTGCTGGAGGGAGGAGGAAATGA
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protein sequence of NO23G00270.1

>NO23G00270.1-protein ID=NO23G00270.1-protein|Name=NO23G00270.1|organism=Nannochloropsis oceanica|type=polypeptide|length=258bp
MGGGASKPGSDISPRTVEIMKKCGEDVNTELRRTMERLKGMKAEYQSHGT
MFGVKESPEAFALRDAFARRILLGNVGGAGACYMLARYMTRYDTTVKRTF
IRVGSLFVGGFLGLSWAMGTGFPPFAIGLLDKSRWAPPLLCPALRKYKPC
IDDEYGCREVLKSGAGSGMGRQIITLYEICQQKTAAGMNTGGEERGGSGG
GGWGQGGGGGGAAIEEEFVSMEDPEKVDGGDFELPGFEEEEEKKAEGVFG
IAGGRRK*
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Synonyms
Publications