|
|
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| chr22 | genome | chr22:490583..494391 - |
Analyses
This mRNA is derived from or has results from the following analyses
Homology
The following BLAST results are available for this feature:
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >NO22G01700.1 ID=NO22G01700.1|Name=NO22G01700.1|organism=Nannochloropsis oceanica|type=mRNA|length=3568bp
GCAGCAGCAGCAGCAGCAGCAGCATCAGTAGCAGTTGATTCACTCCTCCC
TATTCTTTCCAGGAGGCTAGTACCATCATCCAAGTCACTATAGAGCATTG
CCTCTTCCCCATCATGCTGGTCGTCGTTACCTCGCTGATTCTGCTGTTGC
TCGTGGTGGGAATGGTGTTGGTGCGGGTAGATGGGAAGGGCCATGATTGT
TTCATAGGGAGGTATTATGGTTAGCGTCAGACGTTTCACATGTAGCAATT
GATCGCCGCTGCTGCTGCTGCTGCTACTACTACTACTGCTGCTATTACTA
CTACAACTCGACTGCCGTCGATGCAAAATAGAGGACGGTAGGGAGAAAGG
AGCGCTCAAGCCCCCCTTAGCCAGCACTGGACGAGTAGGAGGAAAAAGAG
TAAGACGCTTCTTGTCGTTCTTGCCCTCGTCATAAACAACCCTTGCCTCT
TCTTCCCTCCCGGCACCCGTCGGGCCCTCTTCGAATACAAAGTGCATATC
CTTCGTGCTATTTCGATGAAATTGCCTCGTCTTCCCCCCCTCGTCCTCTC
TCCCTTCCTCTTCCTCCACCACAATCACCTGATTCTTCCTCCCTTCCTTG
TCCTTCTCCCTCCACCTCGATAGCTTTTCCACCACCACCACCACCACTAA
AGGGAGCATTCCGACACACCCAAAAAAATTGAATGAGGCTGTGATGCCAG
AGATTCCGAGAACTAACGAAGACAATATAGCACCAATCCCAAAGGAAAAA
TGCAAGCCTTGCAACCACGGACCAGCCTTGGAGCCCCATGTTTCGAGTAA
AATGATATTACCCAGGGTGGAGATGATGGATAAGCCGTTCCCTTGGAGAA
AGCAGAGGAAGAGTAAGCCGAGCATGCTGGTGCTATGCGGCATGGCCACG
TTTATAATCGAGGCTACTAGACCCGAACACGCCATGATCATCACCTTGCT
TGGACGCACCCCATCTTCCCTTAATCGAGAAACAAACAAAGAACCCGTGA
TGTATCCTCCTGCACGGACAGTAAACGCCCAGCCTAAGGACGTATTGGGC
ATGGCCAAATGCTTGGCAATAGCTGGGATGGCTGGTCCTAGCAGACCTTG
TAGTCCCCCCATGGAGACCCAGCTGAGACAAGCGATGACGCTGACAACGA
CTTTCTTGCTAGCATTTAGGTGTTTGTGGGACGTGTCCAGGCCGGTGGCG
GGATTGTCTACGACCACGAGGGGTGGGGGGAGGATATGCGCCGTCTCCTC
GTCGGCCTCGCTATCATCTTCACCAGGGCGGCAGCAGGCAATCATCTTTC
CTATTTGCTTTTACTTAAGATTGGATCTGGATAGATAAAATGTTTGTGTG
AATATTTTGGAGAGGAGGGACCAGGACGAATACGTGTGTCAGAGCCACAC
AAAGCCCCGAGTAGATTGGGTCACGTGCCTCAGACCTGAGGGCTCTGGTC
AAGGGGATGTTATGTGCTACACTGTACAATGACAGCCAGCTTTGGCATGC
AATAAATAGCCTTGCCCGGGGGTGCACTTGAAAGGAACGAGTCAAGACAA
GACAAGAGGAGGGAGTGTCCATGTGTAAGTATGTCGTGTACACATACCGA
ATGTGTTAGGAAGAAGTTAGATGTGGCTGCGGCCCATTGTCGGGTGAAAA
GTCGTGCACAGTGACTGCCCTGTCGTCATAGGAGGGAGAGCAGAGTCAGT
GTAAGATGGTCTTTAATGATATATGGAAACTCAACTGAAATTTGGGCTCT
GTCCTGGGGCGCACAACCGAGTTTTTTGGGTCCCTCTGCTTTCAACGGGC
AAGCAGACGTTGTCCTCTCGGTTCTTTCTCACGCCTTGAGGTTTGGGAGG
TTTTTAAATTCGAAGACAAGGAGGAGCCTCGCTCCCTCGTATAGGTGTCC
AGTTGCAAGAGACGAAGGGTGTACATGCGTCTTCAAGGTCCTCAATGAAA
ATAATTTGACATAGTCATGTATTGTGCCTGTCATCACCTTTTCCGTGGGA
CTCTCCTCGCCCAACCAAGATTACACCGCATTGCTTTCCTTGCGCCTCCC
TCATTGTCATTACCCACCCACCCACCAGACAAGTTCTTCCTCTATCAAAA
TGAATAAGCAAGCCACGCGCCGGGGCCTGGCCCTTCTAGTCCCTGTCACC
ATGGCGGGCCAAGCAGGCCGGCAACCGCAGCCCGCACAGTCCCGCGCCGA
CCCCCAGCAACACAGCGCGGGCAACAGCACTGTCGTCTTGAACGGCAGCA
GCGGCAGCAGCAGCAACGACCGCAACAGCAACAACAATGCCACGGTCCTT
ACTGCCACGACGAAAAGTAGTACTATTCAGGCATGCGTGGATTCGCCGTC
GTCGCTGGTCCCGCGGGAGATGCCCGATGCTGTGACCCGGGTCGTCTGCG
CCTCTTTCCGATACCAACAGCAGCCAAACCAACGGCAACAACAAAGCAGC
CACCACATCGACGAAAATAATGCATTCCAATCTTCGGCCACTTCCACCCA
TAATAACAACAACAACGTACGCCAGCATGAAGGCATGATTAGCAACGCGG
CCTCGCAGCCCGAGGTCCAAACAAATGTGAATCATCGCCTTGCGCAAGAC
CCCGACTACCACAGATTCTTTTCCTCTGCCAGCGGAGATAATACTGGTCG
CGGGAGAGGACCGTCTATTTCTTGTCCTCTTTCTCATCCTCCTTACGCTC
ATGGTGGTGGTACACCTTCTCCACAGTCCCCTTTGCGTTTACTTCCTCCG
TCCGCTGTAGCTTTCCTCCATCAGGAGCACCAGCAGCATCACCATCATTA
TTCTGCATTCTCCTCTCCAAATGTTTCCCCTCTCTCCCACCGAGCCAAAT
GCTACCTCCCCCCTTCCTCTTCCTCCCCTCCCCCACTCCCATCCACCCTG
TTCCACGCCATTCCGCACAACGCGGACCGGTGCCGGAAAAATTTCGCCGC
GGCAGTCAACTGTTCTGTGTGTTTATTGCCTCTGACCGATGCGCATGTCG
TGGACTGCGGAGAGGGACACGTGTTCTGCCGGGCGTGTGTTTGGAAAGTT
CAGGGGAGGGAGGGAGGGAGGGAGGGAGGGGGAGAGGGCTGGAGCCTTGC
GTCGTGGTTATCGGCGTTTTTCTTGGGCTCAGTCAGGGTGGTTGGGGGAA
GGGGGAGAACGAGGACGAGGAGAAGTAGTGGGAGTCTATGTCCTGAGTGT
AGATGTCCATTTTCAACGTCCATTCCTGTGAGGAGGATAAATGATATAGT
CGAAAGTGTCCGGCGGCTACTCCCGTCTCAATTCGAGGACGAAGATTTTC
AAGAGCAAGAGGAGAGGAACAGACACGCGGAGAGGGAGGGAGGGGCGGAA
GGCGCGGAGGATGCATTGCCGCCAGGAGGGAGGGAGGAGTCGATACCGGC
CTGGTTCTTCACATTTGTGTGTTTTGTGGTGGTGGTGGCGTTTGCCATTA
AAAAATAGCAAAGGAGATAGGAATGGAGTGAAGGAAATGCCTCTGGACAG
AATCAAAAGCATGTTTTAGCCAGAAAGAGGAAACGGAAGTATACTCATAA
AGTCATTGATCTTGGCTC back to topprotein sequence of NO22G01700.1 >NO22G01700.1-protein ID=NO22G01700.1-protein|Name=NO22G01700.1|organism=Nannochloropsis oceanica|type=polypeptide|length=453bp
MNKQATRRGLALLVPVTMAGQAGRQPQPAQSRADPQQHSAGNSTVVLNGS
SGSSSNDRNSNNNATVLTATTKSSTIQACVDSPSSLVPREMPDAVTRVVC
ASFRYQQQPNQRQQQSSHHIDENNAFQSSATSTHNNNNNVRQHEGMISNA
ASQPEVQTNVNHRLAQDPDYHRFFSSASGDNTGRGRGPSISCPLSHPPYA
HGGGTPSPQSPLRLLPPSAVAFLHQEHQQHHHHYSAFSSPNVSPLSHRAK
CYLPPSSSSPPPLPSTLFHAIPHNADRCRKNFAAAVNCSVCLLPLTDAHV
VDCGEGHVFCRACVWKVQGREGGREGGGEGWSLASWLSAFFLGSVRVVGG
RGRTRTRRSSGSLCPECRCPFSTSIPVRRINDIVESVRRLLPSQFEDEDF
QEQEERNRHAEREGGAEGAEDALPPGGREESIPAWFFTFVCFVVVVAFAI
KK* back to topmRNA from alignment at chr22:490583..494391- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >NO22G01700.1 ID=NO22G01700.1|Name=NO22G01700.1|organism=Nannochloropsis oceanica|type=mRNA|length=3809bp|location=Sequence derived from alignment at chr22:490583..494391- (Nannochloropsis oceanica)
GCAGCAGCAGCAGCAGCAGCAGCATCAGTAGCAGTTGATTCACTCCTCCC
TATTCTTTCCAGGAGGCTAGTACCATCATCCAAGTCACTATAGAGCATTG
CCTCTTCCCCATCATGCTGGTCGTCGTTACCTCGCTGATTCTGCTGTTGC
TCGTGGTGGGAATGGTGTTGGTGCGGGTAGATGGGAAGGGCCATGATTGT
TTCATAGGGAGGTATTATGGTTAGCGTCAGACGTTTCACATGTAGCAATT
GATCGCCGCTGCTGCTGCTGCTGCTACTACTACTACTGCTGCTATTACTA
CTACAACTCGACTGCCGTCGATGCAAAATAGAGGACGGTAGGGAGAAAGG
AGCGCTCAAGCCCCCCTTAGCCAGCACTGGACGAGTAGGAGGAAAAAGAG
TAAGACGCTTCTTGTCGTTCTTGCCCTCGTCATAAACAACCCTTGCCTCT
TCTTCCCTCCCGGCACCCGTCGGGCCCTCTTCGAATACAAAGTGCATATC
CTTCGTGCTATTTCGATGAAATTGCCTCGTCTTCCCCCCCTCGTCCTCTC
TCCCTTCCTCTTCCTCCACCACAATCACCTGATTCTTCCTCCCTTCCTTG
TCCTTCTCCCTCCACCTCGATAGCTTTTCCACCACCACCACCACCACTAA
AGGGAGCATTCCGACACACCCAAAAAAATTGAATGAGGCTGTGATGCCAG
AGATTCCGAGAACTAACGAAGACAATATAGCACCAATCCCAAAGGAAAAA
TGCAAGCCTTGCAACCACGGACCAGCCTTGGAGCCCCATGTTTCGAGTAA
AATGATATTACCCAGGGTGGAGATGATGGATAAGCCGTTCCCTTGGAGAA
AGCAGAGGAAGAGTAAGCCGAGCATGCTGGTGCTATGCGGCATGGCCACG
TTTATAATCGAGGCTACTAGACCCGAACACGCCATGATCATCACCTTGCT
TGGACGCACCCCATCTTCCCTTAATCGAGAAACAAACAAAGAACCCGTGA
TGTATCCTCCTGCACGGACAGTAAACGCCCAGCCTAAGGACGTATTGGGC
ATGGCCAAATGCTTGGCAATAGCTGGGATGGCTGGTCCTAGCAGACCTTG
TAGTCCCCCCATGGAGACCCAGCTGAGACAAGCGATGACGCTGACAACGA
CTTTCTTGCTAGCATTTAGGTGTTTGTGGGACGTGTCCAGGCCGGTGGCG
GGATTGTCTACGACCACGAGGGGTGGGGGGAGGATATGCGCCGTCTCCTC
GTCGGCCTCGCTATCATCTTCACCAGGGCGGCAGCAGGCAATCATCTTTC
CTATTTGCTTTTACTTAAGATTGGATCTGGATAGATAAAATGTTTGTGTG
AATATTTTGGAGAGGAGGGACCAGGACGAATACGTGTGTCAGAGCCACAC
AAAGCCCCGAGTAGATTGGGTCACGTGCCTCAGACCTGAGGGCTCTGGTC
AAGGGGATGTTATGTGCTACACTGTACAATGACAGCCAGCTTTGGCATGC
AATAAATAGCCTTGCCCGGGGGTGCACTTGAAAGGAACGAGTCAAGACAA
GACAAGAGGAGGGAGTGTCCATGTGTAAGTATGTCGTGTACACATACCGA
ATGTGTTAGGAAGAAGTTAGATGTGGCTGCGGCCCATTGTCGGGTGAAAA
GTCGTGCACAGTGACTGCCCTGTCGTCATAGGAGGGAGAGCAGAGTCAGT
GTAAGATGGTCTTTAATGATATATGGAAACTCAACTGAAATTTGGGCTCT
GTCCTGGGGCGCACAACCGAGTTTTTTGGGTCCCTCTGCTTTCAACGGGC
AAGCAGACGTTGTCCTCTCGGTTCTTTCTCACGCCTTGAGGTTTGGGAGG
TTTTTAAATTCGAAGACAAGGAGGAGCCTCGCTCCCTCGTATAGGTGTCC
AGTTGCAAGAGACGAAGGGTGTACATGCGTCTTCAAGGTCCTCAATGAAA
ATAATTTGACATAGTCATGTATTGTGCCTGTCATCACCTTTTCCGTGGGA
CTCTCCTCGCCCAACCAAGATTACACCGCATTGCTTTCCTTGCGCCTCCC
TCATTGTCATTACCCACCCACCCACCAGACAAGTTCTTCCTCTATCAAAA
TGAATAAGCAAGCCACGCGCCGGGGCCTGGCCCTTCTAGTCCCTGTCACC
ATGGCGGGCCAAGCAGGCCGGCAACCGCAGCCCGCACAGTCCCGCGCCGA
CCCCCAGCAACACAGCGCGGGCAACAGCACTGTCGTCTTGAACGGCAGCA
GCGGCAGCAGCAGCAACGACCGCAACAGCAACAACAATGCCACGGTCCTT
ACTGCCACGACGAAAAGTAGTACTATTCAGGCATGCGTGGATTCGCCGTC
GTCGCTGGTCCCGCGGGAGATGCCCGATGCTGTGACCCGGGTCGTCTGCG
CCTCTTTCCGATACCAACAGCAGCCAAACCAACGGCAACAACAAAGCAGC
CACCACATCGACGAAAATAATGCATTCCAATCTTCGGCCACTTCCACCCA
TAATAACAACAACAACGTACGCCAGCATGAAGGCATGATTAGCAACGCGG
CCTCGCAGCCCGAGGTCCAAACAAATGTGAATCATCGCCTTGCGCAAGAC
CCCGACTACCACAGATTCTTTTCCTCTGCCAGCGGAGATAATACTGGTCG
CGGGAGAGGACCGTCTATTTCTTGTCCTCTTTCTCATCCTCCTTACGCTC
ATGGTGGTGGTACACCTTCTCCACAGTCCCCTTTGCGTTTACTTCCTCCG
TCCGCTGTAGCTTTCCTCCATCAGGAGCACCAGCAGCATCACCATCATTA
TTCTGCATTCTCCTCTCCAAATGTTTCCCCTCTCTCCCACCGAGCCAAAT
GCTACCTCCCCCCTTCCTCTTCCTCCCCTCCCCCACTCCCATCCACCCTG
TTCCACGCCATTCCGCACAACGCGGACCGGTGCCGGAAAAATTTCGCCGC
GGCAGTCAACTGTTCTGTGTGTTTATTGCCTCTGACCGATGCGCATGTCG
TGGACTGCGGAGAGGGACACGTGTTCTGCCGGGCGTGTGTTTGGAAAGTT
CAGGGGAGGGAGGGAGGGAGGGAGGGAGGGGGAGAGGGCTGGAGCCTTGC
GTCGTGGTTATCGGCGTTTTTCTTGGGCTCAGTCAGGGTGGTTGGGGGAA
GGGGGAGAACGAGGACGAGGAGAAGTAGTGGGAGTCTATGTCCTGAGTGT
AGATGTCCATTTTCAACGTCCATTCCTGTGAGGAGGATAAATGATATAGG
TGCGTTTGTGTGTGTGTGCATTGCCTCCCTCTCTCCCTCTCTCCTCCTTT
CCGTCCTTCCCTTCGTTCCTTTCTACCCTTTTATTTTTCCCTTTCTTCCT
CTCTCCATCTCTCTACCCATCCGCTCCCACCCTGTGCAATTAGCATTTGA
GCACATCCGGATGTCGCTCTCGAACACTCACACCCCTTCCTTCCCCCTTC
CTTCTCTCCCTCCTTCCCTCCCTCCTTCCTTCCCTTACAGTCGAAAGTGT
CCGGCGGCTACTCCCGTCTCAATTCGAGGACGAAGATTTTCAAGAGCAAG
AGGAGAGGAACAGACACGCGGAGAGGGAGGGAGGGGCGGAAGGCGCGGAG
GATGCATTGCCGCCAGGAGGGAGGGAGGAGTCGATACCGGCCTGGTTCTT
CACATTTGTGTGTTTTGTGGTGGTGGTGGCGTTTGCCATTAAAAAATAGC
AAAGGAGATAGGAATGGAGTGAAGGAAATGCCTCTGGACAGAATCAAAAG
CATGTTTTAGCCAGAAAGAGGAAACGGAAGTATACTCATAAAGTCATTGA
TCTTGGCTC back to topCoding sequence (CDS) from alignment at chr22:490583..494391- >NO22G01700.1 ID=NO22G01700.1|Name=NO22G01700.1|organism=Nannochloropsis oceanica|type=CDS|length=1359bp|location=Sequence derived from alignment at chr22:490583..494391- (Nannochloropsis oceanica)
ATGAATAAGCAAGCCACGCGCCGGGGCCTGGCCCTTCTAGTCCCTGTCAC
CATGGCGGGCCAAGCAGGCCGGCAACCGCAGCCCGCACAGTCCCGCGCCG
ACCCCCAGCAACACAGCGCGGGCAACAGCACTGTCGTCTTGAACGGCAGC
AGCGGCAGCAGCAGCAACGACCGCAACAGCAACAACAATGCCACGGTCCT
TACTGCCACGACGAAAAGTAGTACTATTCAGGCATGCGTGGATTCGCCGT
CGTCGCTGGTCCCGCGGGAGATGCCCGATGCTGTGACCCGGGTCGTCTGC
GCCTCTTTCCGATACCAACAGCAGCCAAACCAACGGCAACAACAAAGCAG
CCACCACATCGACGAAAATAATGCATTCCAATCTTCGGCCACTTCCACCC
ATAATAACAACAACAACGTACGCCAGCATGAAGGCATGATTAGCAACGCG
GCCTCGCAGCCCGAGGTCCAAACAAATGTGAATCATCGCCTTGCGCAAGA
CCCCGACTACCACAGATTCTTTTCCTCTGCCAGCGGAGATAATACTGGTC
GCGGGAGAGGACCGTCTATTTCTTGTCCTCTTTCTCATCCTCCTTACGCT
CATGGTGGTGGTACACCTTCTCCACAGTCCCCTTTGCGTTTACTTCCTCC
GTCCGCTGTAGCTTTCCTCCATCAGGAGCACCAGCAGCATCACCATCATT
ATTCTGCATTCTCCTCTCCAAATGTTTCCCCTCTCTCCCACCGAGCCAAA
TGCTACCTCCCCCCTTCCTCTTCCTCCCCTCCCCCACTCCCATCCACCCT
GTTCCACGCCATTCCGCACAACGCGGACCGGTGCCGGAAAAATTTCGCCG
CGGCAGTCAACTGTTCTGTGTGTTTATTGCCTCTGACCGATGCGCATGTC
GTGGACTGCGGAGAGGGACACGTGTTCTGCCGGGCGTGTGTTTGGAAAGT
TCAGGGGAGGGAGGGAGGGAGGGAGGGAGGGGGAGAGGGCTGGAGCCTTG
CGTCGTGGTTATCGGCGTTTTTCTTGGGCTCAGTCAGGGTGGTTGGGGGA
AGGGGGAGAACGAGGACGAGGAGAAGTAGTGGGAGTCTATGTCCTGAGTG
TAGATGTCCATTTTCAACGTCCATTCCTGTGAGGAGGATAAATGATATAG
TCGAAAGTGTCCGGCGGCTACTCCCGTCTCAATTCGAGGACGAAGATTTT
CAAGAGCAAGAGGAGAGGAACAGACACGCGGAGAGGGAGGGAGGGGCGGA
AGGCGCGGAGGATGCATTGCCGCCAGGAGGGAGGGAGGAGTCGATACCGG
CCTGGTTCTTCACATTTGTGTGTTTTGTGGTGGTGGTGGCGTTTGCCATT
AAAAAATAG back to top
|