NO22G01580, NO22G01580 (gene) Nannochloropsis oceanica

Overview
NameNO22G01580
Unique NameNO22G01580
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length6798
Alignment locationchr22:464523..471320 -

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr22genomechr22:464523..471320 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO22G01580 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL033nonsL033Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR025ncniR025Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR078ngnoR078Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR077ngnoR077Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK004103NSK004103Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO22G01580.1NO22G01580.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO22G01580.1NO22G01580.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO22G01580 ID=NO22G01580|Name=NO22G01580|organism=Nannochloropsis oceanica|type=gene|length=6798bp
AGCACAAGTCCCACCTTTTTTTGCTTTGGTTTAATCAATTACAATGCTTA
CTTATGCTATGTACACGAGATGCATCAATTCCACGACAGCATCACCCTTG
TTCGCTTTTCCCTCGTCCTCCTCGTCCTCCTCGTCCTCTTCCTCGTCCAC
ATCATCCTCATCCTCATCCTCATCCTCCTCGCCCTCCTCCTCGTCATTCT
CCTCCGCTACACCACAGTCTAAAGTCCCTTCCTGCTTTTTGAATAAGGAT
CTTCAACCACCCATAGTTGCCCTTCTCTTCCCCACCCCTGTTGTTGCCGC
TGCTGAAATGTCAACGACTCAAGCACCAACCCATTCAATGTTGGCACTTG
CTTCCCCCCTTCCTCCTCCTCTTTCATCGAGAAAGCACTGTGCATGACTT
TGCCTATCCATGCCACCAGGGCACTCTGTATTGCCTCTCCCTCCTCCTCC
TCCTCCTCCTCCTCCTCCTCCTTCACCACCACCTCGTCATTACTTCTACC
ACTAGTCTGCGGCTGATGCCTCTGCTTTCCTCCTCTTGTTCTTCCTCTTT
CTCCTTCGTCTCCTCCCCTTCCTACTCCTCGTCCCACATGAAAATTAAAC
TCGACCAGTCTTGCTCTTGCCTCATGTACACCCGGGCCCCACTTCCCCTC
TACTTCAACTTTGTTTAGTTCCAAGCTCCCCGTCTCCATTGCTGGCGCCG
CTGCTGCTGCTGCTACTGCATGTTGGACCTTCCTCAACCCCTCCTCGTTC
CTTACCTCCTCTCTTATCGACGATGGAGTGAACAACCACGCACGATGTCG
CAGACTGGGGTCGCCGACAGGGCCTATCATCACTGTATATGAGAACCGCA
TGCATACTAAGTCCTTCTTTAAGTCGAATCCCACCCAAGGCAACGGGCAA
ATGGAAAATATTCTCAAGTCATCGGGTAAGAGCCGATTGAGTGCATGGGC
TGCCTTGGTCAAGTCACCGTTAAACGGATCATTGGCGCTGATGCTGCCAC
CGCCGCTACTAATGCCGCTACCGCTGCTGCTGCTGCTGCTGCTGCAAGGT
GGTTGATAGGAAAGCAGTTGCGCCCGGGCGTGGACCCCCCCAGAGGTGAT
GATTGCGGGAGTGAGGAGGAGGGAGGCAAGGGGGGCGTGAGAGTGAATGA
TGGAAAGGGCGGTGCCAAGACGATGGTGGAGGGAAGGAGGGTGGTTGGCG
AAGAACCCTTTTTTTCTTCGGACACTCTTTATATTCCTATTACTGTTGTT
GTTGCTTTTGGCGCCGTTCTTGCCATCGCTAGATAGGGGTAGGGTTGAGT
CGTGTATCACTTTGTCCTTCCAGACTTTGTATTGACTACCGTCGTAGGCG
ATGTGAAGGAGAAGAGGGGGAGGGAGGGAGGGCGGGAGGGGTTGCTGGAG
GTCGTCGGTGTTGTGGGTTATGGCAGAGAGAATGCGTGGCGGATGGTGGT
ACCGAGACTGCTGCCGGAGAATGCAAGGAGAAGGGGAGGAAGGTGGTGGC
CAGAAGGCTTTCGTGGGCACAAAAAGTAAGGAAAGGATAACTATTGCTAG
CAGCTTAAGGCTAGGAGTGGCGTAGTGGCGGTGGTGGTGGTGCAGAAGCA
TCATGCCTGTGTTTGGAGTGGGGGAGATATGGATTGGACGTGAGTGGGAG
GACGGGGTCTCTTCCACCAACAGAACGTTCTGATTGCGTTTTCGCCGTGT
TGAAGGCGACGCTTCTGCACGTAGTTCCATGCATGTGACCCTTCACTTCT
TGTACACATTCATTTTTTTCTTTGCGTCATTTTGGCCTCAACAATCACCC
TCCTGCTGTGACCTTCCCATTCGCCTCTGCACACTCCCCCTTCTCCTTCT
CCTCCACCGAACTGGTGGCAGCAGCAGCCGCAGGTCTTGCCAGCGGCGGA
GCCGGCGCCGGGCCCACCAAAACCGGAATTCGTGCCACCACATCATCGGC
ACACACATACAAAAACCTCCCCCTTCCCCCCTTCTCCTTCTCCACCCCTC
CAAACGCCACGTTTCCCGTCTTCTTCCCGGTCAGAATCGTCCCCACCCGC
TCTCCCGAAGGCGTCAAGATCAACACCCCCCCTGGCCCTGTCGTCCACAA
ATTTCCCTTCTCATCCACCTTCATTCCATCCGGGCTTCCAACCCTCTTTC
CCTCCTCTTGGAATTGACCAGCTAAGGCAAACACCTCCCCTCCCTCCCTC
CCACCCTCGGCTCTGAGACCTGTGGTAGGGTCCATATCTACGACAACCCA
ATGAGGATTCTCCGCACCACTATTCCCGACATACAGCTTCTTAAAGTCGG
GAGAAAACGCCAAGCCATTCGGTCGCTTCAACCCCCCCAAAACCAACTCC
ACCTCCTCACTCCCCCTCTCCTCCCCCTCCATCCCCTGCCCTTGCAGCAA
CTGCTGCTGCTTCTGCATGGCCGCTGCCGACAATCGGTAGACACCACTTA
TTGCCAACTCCCTCTCGGAATCCCCATCTATCCCATTCAAGCCGTAGGGA
GGGTCGGTAAAGTACAGGTCCCCCCCAGGCCCAAACACCAGGTCGTTGGG
GGAATTCAATTTCCGCCCCTTGTAGTGCGTTGCCAAGGGAGTGAATGTCC
CGTTCGTTTCCAACCTCGCCACACGTCTCCCTCCATGCATGCACATGACC
ACCAGCCCTGTCCCTGGTTCCAAAGCCAGGCCATTCGACCCCGGTTCACG
CAACGCCGCACACCGCGCGGCATCACGAACACTGCTGCTGCTGCTATTAT
CAGCTGGTGAGAACCGACAGCCACTTTCCTCCAAATACACACTCTTTCCA
ATCGTAAACAAGCCGCCGCCCTCCTCCCACCGATAGATCCGATTCTTCTT
CACGTCGCTCCACAGTAAGAACCCACCATCCACACTGTCGTCCTTGTCCG
TCACCCACAAGGGTCCCTCCGCCCATAGATTCCCCTCGGCAATCACTTCC
AAACAGGCATCCGGCGCAATCAATGTGTCGATAGCCGCAGGTTTCACCCT
CTCCACACTCCCCAAGCTAGGGCGGCGATTCATTGTGGCCTGCAACAGCA
CCAAGTATCCAAACAAGGCGGGGAAGAAGATGGTTGCCCAGTATGCATCG
GCCGGAGGCCAAAAAGAAGTCAGCTTCATTTCCCCCCCGGTGGAAATAGA
ATGTTTCCGTTCGGAGTCTCAAGGGTCTTGTCTTCTTGAAGTCCTCTGCT
GGTGTGTGTGGTGCAAAGTAAGGTATGCTTGGGGAGGGGGTCGGAGGGCG
GAGGAAGCAGTGTACTGGCAGGAGACGAAAACGGTCAAACGCGAGACACC
CAGCGCTCCCTAGTTGCCGTTTGAATTCATAGCAGGAATGGGATTTGAGA
TGTGAAAAAGTGTGTCCAGGTCCCCTGATGCTGGTGTGGTTGGTGCATGG
TGCATACATTCACAGGTACAGGCCTCGCCAAATCCACCATCGGGGTTCCG
TCAACGGTTGCCGCGTCTTCTGTGCTCCTTGTCTAACGCATTAACGCATT
AACATACCACACGTATAGGCCACGAGTTATAAACTATGGTCGTGAGCCGC
AGCACCGCCGCATGCAACTCCAAGACCATTCACGGGGGCGTTCGGATGGG
AGCATCGACTGCTTTGCGCGGCAGAAGGGGAGGCAGGAGCAGTGTAAACC
CCTCTTCCCGCCTTGCTCCTCCCAGCTCTCGCGCCTCCGCCGCCGCTGCT
GCCGCCGCCAAAACCAGCCGCCACAACACTCCAGGAGGTGGCCAAGTGGC
TTTGTTATCCAACGAGAGCATCAAGGAGTTCTTGCTAAGCTTTCCTAAGG
CGCAATGGCCTGTGGTCCTAGAGgtaggtcttcgggaaggaggggagaga
gggaaagcggatgccctgcctgtgagtgcatatgtgctagtggctacgta
aaagaacgtggatgcgaatcgatgcactcatggctgggaatagcattgtg
cttcaattgaaaatgtgccacgggcaggaaagcaagagaaaataaaaagg
tcttatgaaagtccctgtctccccaacactagatataatttgtagtactc
atcaactacaacaaatctcatttcccctccttcgttctcaaacagAACAT
CGTCCTGTACGGCATTCGTTCTCTTTACTCCAATTGTCCCCCCGGCACCA
TCGCCTCTGTCTCAGAACTAGAGGAGATCACAGGCCGGGCCCGAAAAGAA
GTAGCAGCCATGTCCCCTCCTCGACGGCCACTACGAAGCCGCGGAAATGC
CCAGCAGCAGCAGCAGCAGCAGCAGATAACACATGACAAAGAAATAGGAG
AACCAGTGGCAGGCACGGCGAACCATCCTTCCTTCCAGGCCAGCCCTCCC
CCTCGCCAATCCCGCCGTGACGCACTCTATCAATTTCCTTTCGTGGACAG
AGAGGGCCACATGGACGGCATTCTTGGCGAGAACTCCGCGGGCGCCTTGT
CTCACTTTGTATATTTTGAATTGGACGTTCGCGAGCAAGAACGGCAGGCC
AGGAAGGTGTTTGAGGAAATGAAGAGGGGGGTGGGTGGGATACGGATCGC
GGATCTAGCCTTCTCTCTCAGGGCGGTGGGCATTGATTTGTCCGACCGGC
AGGCGAAGCAGCTGATGCCGTCATTGTATGAGCAACAAATAGGGAGGGCC
TTCACGATGAGTGGTAGCTACGCAGGCGGTGGTGGAGGGGGGTTGGCTAT
CCCGGGGGAGATCTCGATCCCATATCCCCAGTGGCTTGACATCCTATCGA
CGCTCAAGGACGTCTTCCAGCCGTACCTTGAGCACCAGCAGCAACGCACC
GCTGCTACTCCTTCTTTTTCTAATGCCCGTACTGGTGCTGCTGCCCCGTT
CACAACCAGCAGCAGTAGCAACAACAACACCAGGGGAGGAGGCATTGCTA
CAGCAGGAGCAGTGGACGACATCCGCCCTCCTGCCCTGGACGCCTCCCTC
TCCGTCTCTACCATCAACCGCCGCTCCCAAGCGTCCACCCACGTCTCTCC
CGATCGGGTGCGTCGTTGCTACGGCCAAGGCCTCCACGGGTACGGCATTA
GCACCGACGACAACAGCAACAGCGGCGCGGGTCCCGGCCGTCGACGTCGC
ACAGCAAGTGACCACTCAGCCTTCATGTCCAGTGGAGGAGAGGGTGTTGC
AAGCCCCGCCACCTCTCGTTCGTATGTTGCCTCCTCCCCTTCCCTTCCTT
CTGCCTCGAAGGCATCCTCGGCGTCGGGGCTGTCAGCTTCCGCTTCCTCC
ATGGGTGCTTCTCTTCCCCCTCCAACTTCCTCTGTGTCCTCGCAGCGTCG
GCGTGGTGCTGGAGGGAGGATGAGCAGCAGGGGAGGAGCCGTGGTGGGTA
GGAGTGGATTGAAGCATGAAACAACGAGGCTTCATAGCGACGAGGAGGAG
GAGGAAGAGGAGGAAGTGGAAGATGAAGATGAAGAGGAAGAGGAAGAGGA
GGAAGTGGAAGATGAAGAGGAAAAAGAAGAAGAGAAAGAGGAGGAGGAGG
AGGAGGGCTTGCCCACTTCGGCGGTCCATCGCCAAGGTACTTGTACCTTC
TCCTCCTTCCAACCCCCCTTGTCCTCCTCTCGTCCTACCACTGCCGCTTC
CACAGCGCATCATAGGCTTCCACGTTCGGTGCTGCGGCGGCAGCACCGCA
GGCAGGGAGGGGAGGACGGAGAGATGGAGAGCAGCAGAGACAACAGTAAT
GCTGGAGTAGACACCCCCGCGATGCCCATCAAAGCCCGTGTCAAAACCTG
TGGGACTGCTGGTGCCGCTTCTGCTGGAGGAGGAGAGATGGGGAGGGGCG
CTACTACGATGAGGCGGATGAGAGGTGGCAGTGGTGGTACTGCTGTTGCT
GTTGCAGCTCCTTCGCCTGCCTCCTCCTCTTCCTCACCCTACCCCGTCCC
GCGGTACTTGCGTCATGTGGAGTCCAAAATTAAGCCCCAGATGCAGGCAC
GTCGGTACGAAAAAGCAAGCCAGGCGGCGGCGATGGCGCGAGGAGGAAGA
AGAGGGGGAGGAGGAGGTAGAGAGGAAGAGGACGAGGAAGACATCTCCTT
GGTAGAAGTGCCGGCGAAAGCGACGCAGCGGAAGGCCAGCATGAGAAATT
CTGCTGCGACCGACGCTACTAGTAATACCACAAGAGCAGCAGCAGGAGTG
GAGAGGAGGAAGCATTTCGCTGCTTCTTCCAGTTCGACTTTCTTGAGTTC
CACGGCCTCGTCCGGACCTGAGATCGCTGAAGCCTTCCTCTTGGGCCCGC
TTGGAGCCCAGCTGCGTGCTAGCGGAAGTGAGGGCGGGAAAGGGAGGGAT
GGGGCGAAGAAAAGGCAAGATAAGAGTGTGACTGATACGAGCAAAACAAT
GCCCCTGCGCCCTCCGCTGCAGTACGAGGTCGGGAGGAAGAAGACGTCGT
CAGCGGCAGGAAAATGGGTGGGGGAGTATGGCAAGCTGCAGACTAAAACG
ACTAAGGCTGCAAAGAGGGAGGAAGAAGAGGAAGAGGAAGTGGAAGAGGA
AGAGGAAGAGGACGGGGAAGATTTTGATTCATCTTCGCATTCCTCTTCCT
CGGCGTCGTCCTCTTCTTATTCTTCCTCCTCTTCCTCGGATGAGAGCTCC
GATTCCTCCGACTCTATCTCCTCCCATTCTTTGTCTTCCACCCCCTCTTC
CTCTGACAGTTCATACGAGGTGGAATTTGTCCCCTTGGCAGCGAGATAAA
GCGAGCGAGAAAGACCTAAGACGAGCAATTTGCATGAAAAAGCACACCAC
GCATGACACACATGGATATCCACTTATGAAAGAATACTGGATCGACGG
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protein sequence of NO22G01580.1

>NO22G01580.1-protein ID=NO22G01580.1-protein|Name=NO22G01580.1|organism=Nannochloropsis oceanica|type=polypeptide|length=964bp
MVVSRSTAACNSKTIHGGVRMGASTALRGRRGGRSSVNPSSRLAPPSSRA
SAAAAAAAKTSRHNTPGGGQVALLSNESIKEFLLSFPKAQWPVVLENIVL
YGIRSLYSNCPPGTIASVSELEEITGRARKEVAAMSPPRRPLRSRGNAQQ
QQQQQQITHDKEIGEPVAGTANHPSFQASPPPRQSRRDALYQFPFVDREG
HMDGILGENSAGALSHFVYFELDVREQERQARKVFEEMKRGVGGIRIADL
AFSLRAVGIDLSDRQAKQLMPSLYEQQIGRAFTMSGSYAGGGGGGLAIPG
EISIPYPQWLDILSTLKDVFQPYLEHQQQRTAATPSFSNARTGAAAPFTT
SSSSNNNTRGGGIATAGAVDDIRPPALDASLSVSTINRRSQASTHVSPDR
VRRCYGQGLHGYGISTDDNSNSGAGPGRRRRTASDHSAFMSSGGEGVASP
ATSRSYVASSPSLPSASKASSASGLSASASSMGASLPPPTSSVSSQRRRG
AGGRMSSRGGAVVGRSGLKHETTRLHSDEEEEEEEEVEDEDEEEEEEEEV
EDEEEKEEEKEEEEEEGLPTSAVHRQGTCTFSSFQPPLSSSRPTTAASTA
HHRLPRSVLRRQHRRQGGEDGEMESSRDNSNAGVDTPAMPIKARVKTCGT
AGAASAGGGEMGRGATTMRRMRGGSGGTAVAVAAPSPASSSSSPYPVPRY
LRHVESKIKPQMQARRYEKASQAAAMARGGRRGGGGGREEEDEEDISLVE
VPAKATQRKASMRNSAATDATSNTTRAAAGVERRKHFAASSSSTFLSSTA
SSGPEIAEAFLLGPLGAQLRASGSEGGKGRDGAKKRQDKSVTDTSKTMPL
RPPLQYEVGRKKTSSAAGKWVGEYGKLQTKTTKAAKREEEEEEEVEEEEE
EDGEDFDSSSHSSSSASSSSYSSSSSSDESSDSSDSISSHSLSSTPSSSD
SSYEVEFVPLAAR*
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Synonyms
Publications