NO22G00270, NO22G00270 (gene) Nannochloropsis oceanica

Overview
NameNO22G00270
Unique NameNO22G00270
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length4711
Alignment locationchr22:96178..100888 +

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr22genomechr22:96178..100888 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO22G00270 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniR025ncniR025Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR077ngnoR077Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO22G00270.1NO22G00270.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|595319gene_7024Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO22G00270.1NO22G00270.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO22G00270 ID=NO22G00270|Name=NO22G00270|organism=Nannochloropsis oceanica|type=gene|length=4711bp
ACAGGCATAGTCTCGCCATAGCTCTACGATAGGCGAGGGCCTACAATACA
CCAAACACGAGCGGCGGGGCTGAGGGTGAAGGTCCTCTCTCATTGCGACT
GAAGTTTAGAGCTCGACGCTTGCGCCCGAACTTGGCCCACGCTCTCCCTC
CCTTCCTCCCGCCATCGTTCGATAATTCCCGCGATAACTAGATATGCCGG
CACGGTGTGAAGACGGCGGCGGAATATTAAGTCCTATTGTGATGCCTCCG
GCACTGGTTGTTCCAGCGGGCTTGGTTGAGGATGATAGGGAAGGAGGAGG
AGGAGCAGGAGATGTGCGTACACCCATTCCTCCCTTGGCGCGAATTAACA
TGAGCAGCAGTAGCGGTAGAAGCAGGGGCAGGAGCAACAGTAGCTGTGGC
GTGGCCTGCACGGAGAGAGAGGAGGAAGCGGCCTTGGGGAGGGAAGAAGG
GGGAATGGAGGGGGAAGACAAGACAGCGGTCGACAAGGCAGTGATAAAGg
taagcagagagggccgagagagagagaggggggaggaggggaagaagaaa
gagaggatttaatctactgctgtttaaaaatggtgcccggatgatcgagg
aggagggaagggagggagggaggaaaggaggacgacgtctgtcctgcgcc
cactcacggaaatgtgttacttaattacatgcatatgacaaacagCCATT
CTCATCTCCTTTGTTGTCATCTGTGTTGCCGTCTTCTTTGTGCTCTTTAC
CGTTTCGTCCCTCGGTATCACGTGAAGAGAGGGGGCAGGCACCAACGCCT
GTGGGTTGTAAGGAGAGGGAGGAGGAGGTGGTGGTGGTGGAGGAGGGCTT
GACGGAGGAAAATGCACCAGCATTAGTAGAGAAACACACTGAACAACAAC
AGCAGCAGCAGGAGGAGGAGGAGGAGGAGAAGGTGTATGAGGAGGGAGTG
AAGGAGGAGGCAGCAGCTGTAACGGCAGTACCTAGACCTGAAAGGAATGA
GGAGGAGGGGGAGGAGGTGGAGGTAAGGAAGGTGGAAGCAGCATCGGCAC
TATCATCACTTTCATCATCATCATCATCTTCGTCATCATCATTCCCTCCA
CCTGTGAGGAAGCAGCAGGAGAAGGAGGAGGTGGAGGAAGAGCAAGTAAT
GAAGGAGGGAGCGACTGCAGCAGCATCAGCAGCAGCATCATCATCACCAC
CACCACCACCACCAGCAGCAGCAACTGGACCATCACCACCTGCTGTGATA
GAAGAAGAAATGGAAGATGGGAATATGGAGGTGGAGGAGGAGGAGGCGGC
GGAGGAGAAAGAGGTAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAG
CAGCAGCAGCAGCAAGAGAAGCAAGAGCAGCAGTAGTAGCAGCAGCTTTG
TTTGCCAGCAGTGATGAAGAGGAAGAGGAGGAGAAAGTGGAAGGGGAGGA
GGATGAGGACATGCCGCTTTCTTATCTTTTGAATAGAATCGGAGGGGGGG
GAAGGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAACAGCAACAAAAGCAG
CGGCTGTATCTAGAGAAGAAGAGGAGAAGAGAAGAAGAGTTAGGGATGGA
GGAAGGGAGGGAAGCGAATGTACACAGGCCTTTGACGGGACCTGTCGCGT
CCTCCTCCGCCCCCCCCTCCCTTCCTTCCTCGTCCTCCTCGTCCTCGTCC
TCCTCCTCCTTCACGCCTGCTCCCCTTGCAATCAAAAAGATTCAAACAAC
GGCGATAGTGCCTGCAGCCTCTCTAAGAGGAGGAGGAGGAGGAGGAGGAG
GCATGATTGTGGTCTTGGAAAGGGGGGGAGACGGGAAGTACCGGGTCCAA
AAGCAGCAGCTGCAGGAGGGAGGAAAGCTGGCCTCTGCCACCACCATTTC
TGCTATCAAGCAGAAGGGGGTACCAGTAGCAGCAGCAGCAGTGGCGGTGC
GACAAACATCTATAACAGCAGCATCTGCTACGTTGAGGAAGAAGAAGAAG
CAACAGAAGCGGGCGAAAATAAAGACGAAGAAGGGAGGGAAGAAGGGAGG
GAAGAAGGGAGGGAAGAAGGGAGGGAAGAAGCGTGTGCGACCCTGGGCCC
TGTCTACCTCCCCGCAAGCCTCCTCCTCTTTCCTCCCCTCTTCCTCCCCC
TCCTCCTCGAGCAGCAGCGAAGCAGAAGACACGGAGGACGAGAAAGGGAG
GGAAGGAGGGAAGGAGGAGGAGGACGAGGAGATGGAAGAGAAACCCATCG
CGCTGATCGGCGAGCCCGATGAGAAGGAGGGAGGGAGGGAGGGAGGTAGG
GAGGAAGCGGCAGCTGCACGGGCCACGAGGACTGGGGTCGTGATCCATCC
ATCTCCGGAGCTGGCGGCAGAGTGTAAGACAGAGGAGCTTCGACGTCATT
TCGAGGACTTGAAAAAAACCTATCTGACCATGCAGGGCGTGACACGGCGG
ATGCGGGGGCAGGAGAACACAGgtaggtaggtaggtctgtagggagggag
ggaggcaaagggcaagaccgatgaatgatatgtatatatgtgtcaccacc
atccacgccctgtcaagagaaaagggcgaaattgaccatatatatacact
tctatggatacactatatgtgtatacactacatgtatacatctattaaca
tcattcctgcactccacatactcaccctttcaacagtgctcccgattgcc
catattcccagccacctccctccctccctccctccccccccccctccacc
tcctcccccccctgccaagACACCACACACAGCGACGCCCCTGCCTCCTC
CTCCTCCTCCTCCTCCTCCTCCTCGCCCTCCCTCCCGCCCTCCCTCCCGC
CCTCGACCAACGACGTCATATTCCCCGAGATGTGGCGGCCGTTTGATTCC
TCTAAAACATGGCCCATGTGCATTTTCTACCGCAACCCTGgtacgtcctc
cctccctccctccctccctccctccctccctccctccctccctccatttc
tttttcctccttgtctcctgtcttctcccctcatcccccctccctccctc
cctccctccatttcttttccctccttgtctcctgtcttctcccctcatcc
cccctccctccctccctccctccatctctttttcctccttgtctcctgtc
ttctcccctcatccccctccctccctccctcccacagACCTCGACCCGGA
GATCTACAGGGCCTGTCGCTCCGACTCGCATAGCACGTATGGCGAACACA
CCTCCCCGCGGCAGgtagtgaaggagggcgggagggagggagggaaggag
ggcgggagggagaactccttcgagatgccggcgctattttgtgacttatc
atgcctgtctatttctctccctccctccctccctccctccctccctccat
ctcttgtccccccccgagtcatctttctccctgagggcactgtgtttcct
gacttctcccccctccctccctccctccctccctccctccctccctccct
ccctccctccctccctccctagGATGACCCTACCTGGCCATCCATCCTCC
AAGAGGGTTTCGTCCGTCGCGTCAAGAGCTACGTGGAGCAGCACAAGGAC
GACTTCAATCTCGgtacctcctccctccctccctccctctcccacctccc
ctccctttatatttccttcacctgctctctgttcaaactcgcctttctca
ccctcctccctccctccctccctccctccctccctccctccctccctcct
tctccccccccgtcagGCGACAAGATCGCCTTCTCCATTCAAGCTTTATG
GTATGACCAGAAAACCCGCAAAGCCGAACACAAAGACCCCAAGGCCTACA
CTATCATCAGTGCCCTCAACGTCCAGgtacgccctccctccctccctccc
tccctccctccctccctcctttctttcctcccttttgctggatcgagccc
gatcgaccgctcttcgtgtgcaaattttcctcgacaccctccccttcacc
ctccctccctccctccctccctccctccctccctccctcccccagGGCGA
GGCCGACCTCCAGCTCTACGACTGCAAGCTCCGCAAGAGGCATCAGTCAG
CCCTCCTTCCTGgtacgactaagagggagggagggagggagggagggagg
gagggagggagggagggagggagggagggagggagggagggagggaggga
gggagggagggagggagggagggagggacggggacgggggcggaaagccc
tggtcgaaaactacgttcttaattatagtcctccccctcccttcctcttc
ctcacctcctccttttctccttccctccctccctggccttatgcttatga
ttcagAGGGCTCGGTCTATGTGATGCATAACGAGGCCGTGACCCGCCTCG
ACCACGCCGTCTCCGCTCCTCATGCTTCTTTCAAGgtacgtcctgcccct
ccctccctccctccctccctccctagggcaatcgcaccactctcgttctt
cgctttatcgaccgctcttcctactcccgcttctgataagttatccatct
cacgcctccctccctccctccctcccaagGACAATCGCGTCACTGTTGTT
CTTCGCTTCATTGACCGCTCTTCCTACTCCCGCCTCTGTAAGGACGTACG
CCGGCGCCAGCGACGGCTCCAGCGGAAGAGGGAGGGAGGGAGGGAGGGAG
GGAGGAATTGA
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protein sequence of NO22G00270.1

>NO22G00270.1-protein ID=NO22G00270.1-protein|Name=NO22G00270.1|organism=Nannochloropsis oceanica|type=polypeptide|length=937bp
MPARCEDGGGILSPIVMPPALVVPAGLVEDDREGGGGAGDVRTPIPPLAR
INMSSSSGRSRGRSNSSCGVACTEREEEAALGREEGGMEGEDKTAVDKAV
IKPFSSPLLSSVLPSSLCSLPFRPSVSREERGQAPTPVGCKEREEEVVVV
EEGLTEENAPALVEKHTEQQQQQQEEEEEEKVYEEGVKEEAAAVTAVPRP
ERNEEEGEEVEVRKVEAASALSSLSSSSSSSSSSFPPPVRKQQEKEEVEE
EQVMKEGATAAASAAASSSPPPPPPAAATGPSPPAVIEEEMEDGNMEVEE
EEAAEEKEVAAAAAAAAAAAAAAAAREARAAVVAAALFASSDEEEEEEKV
EGEEDEDMPLSYLLNRIGGGGREEEEEEEEEEQQQKQRLYLEKKRRREEE
LGMEEGREANVHRPLTGPVASSSAPPSLPSSSSSSSSSSSFTPAPLAIKK
IQTTAIVPAASLRGGGGGGGGMIVVLERGGDGKYRVQKQQLQEGGKLASA
TTISAIKQKGVPVAAAAVAVRQTSITAASATLRKKKKQQKRAKIKTKKGG
KKGGKKGGKKGGKKRVRPWALSTSPQASSSFLPSSSPSSSSSSEAEDTED
EKGREGGKEEEDEEMEEKPIALIGEPDEKEGGREGGREEAAAARATRTGV
VIHPSPELAAECKTEELRRHFEDLKKTYLTMQGVTRRMRGQENTDTTHSD
APASSSSSSSSSSPSLPPSLPPSTNDVIFPEMWRPFDSSKTWPMCIFYRN
PDLDPEIYRACRSDSHSTYGEHTSPRQDDPTWPSILQEGFVRRVKSYVEQ
HKDDFNLGDKIAFSIQALWYDQKTRKAEHKDPKAYTIISALNVQGEADLQ
LYDCKLRKRHQSALLPEGSVYVMHNEAVTRLDHAVSAPHASFKDNRVTVV
LRFIDRSSYSRLCKDVRRRQRRLQRKREGGREGGRN*
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Synonyms
Publications