NO21G02580, NO21G02580 (gene) Nannochloropsis oceanica

Overview
NameNO21G02580
Unique NameNO21G02580
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1843
Alignment locationchr21:788546..790388 -

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr21genomechr21:788546..790388 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO21G02580 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL031nonsL031Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR092ngnoR092Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO21G02580.1NO21G02580.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO21G02580.1NO21G02580.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO21G02580 ID=NO21G02580|Name=NO21G02580|organism=Nannochloropsis oceanica|type=gene|length=1843bp
GATAAGCAGGCGTTAGAGTGATAACTGCCCTTGGCGGTCGTTTGTGTGTG
GCTCGGCTTACGCCTTCCTCGTGCACTTTTTCATGGAAATTAGTTGTGAA
TTGACCCTTTAAAAGTATACAGCTGAAATTATGAGACAGTTAGCAATACT
TAGATGTATTTAACGGGGGGGGGTTAATGCGTTGTGGTTAGACGTTATGC
TTTTTTAAGATTTGCCATTCCAAGCTTCTTTTTATTTCGACAAGTTCGCC
CGAGCTTTAACTCGGGCGAACTTTCGAACTCACGAACTGGTTCGAGCATT
CCCTAACACTCACATAAGCAACACCAGAGCATATATGTGCCACTCTCCTG
CATTCCTTCGTCCACTTTTTAATTTCACACGATCATGGTCGTCCCTTTCC
CCCCCTCCCCCTCCCACCCAACACAGAAACCAATACCAAGTCATGTTTAT
CTCCAAGGCCTCTGCCGTCCTCGCCGCCGCCCTCTTCTTCCTCGACTTCC
CGGCCATGGCCGCCAACGGCGTCGCCCAGAAGGCCGACAAGGCCACCCTC
CTCAAGATCAAGCAGCCTCTTCGAAACCAGATCAGAGGCCTGGTGTTCTC
CTTTTACGTCAACTACGCTGCGTTGGACGGGCCCCTAGAACTCTACGCCA
ATACCACGGATTTCAAGGCTGCATTTTACGATAAACCCATCTATGCCGAG
GCAAGCAATTCCAGCGAAGTTCTTGGGAACGCATTgtaagtcagccgctg
cagtcgcgggaggtaagcgtgccaatctagcttgagcgtctcacaacatc
actactcgtataaacttcacacagCTACAACATCCAAATTTTTGACGAGG
TCATTGGGTCTCCCGGATCTGCTGAAGGGAACTATCAGTCGGTGCAGAAC
GTGCCCCTTCTCGACAAGAAGGGCGAGCTCAAAgtatgtgtgtcgatggc
aagcactgcctcccacctttatcccctcttagaagctactcctactccat
aatcttgctatctcagctcttccatggcttttgagccttttccattttac
catcatttgcccccctataattctccctccttccctccctccctcgccct
caactagGACGTGTACATCAACATTAATGGCCGCGTTCAGTATGTGCTGG
CCCCCGGTCAGGCCTACCCTTTCGCGACCGCGGCCAAGATTCTGTCGATT
TCCGTCTCGTCATTGGAAACCGAGGGCATCGCTTGCGTGAACGTCGGCGT
CAACGCTTTGAATGTCGAAGGCAGCAAGCTGACCCAGTACGTGATTGACT
TGCGCAAGGCCGTGTGCGTGAAGCAGATTATCGACTAGTCTACTGGCTTT
GGGTACCCTGATTGGAATTAAACATGCAAGGTGATTCTTGAAATTGCAGT
GGGAATTGAGTACGATGGAATCTATTTTATTTTGTTCAATTTGTAACATT
GCAAGACAAACTCGCCCATGAAGATTAAGAAGCTTCAAGATGATTTTCCT
GGGTGAAGCAAAGACGAGAACGAGGAGAAGGGCGGCGTTCAAGGCTGGAT
GTATGCGTACATAAAAGTGCACACCCTCCCATTCTTTTTTCTCTGTATGT
TCGTCTAGTTATTATTTGTGTTGTATTGTGATGTCTGTGTTGTGTCCATG
TCTGAATTTGTGTCTCTGTGTGTATGGGGTGTAGGAGTGGATGAGCATCT
GTCAACAAGCGGCAACAGCAGTATCGCAGCAGTAGGAATGCAAATGGCGC
GATAAAAAGAAATCTATATAAAACCAGGAAAAGAAAGAAAAGGAAAGCCG
TACGCATGACTGTCTTACATTAAAAAAAGTCCTTTTCGTTGAG
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protein sequence of NO21G02580.1

>NO21G02580.1-protein ID=NO21G02580.1-protein|Name=NO21G02580.1|organism=Nannochloropsis oceanica|type=polypeptide|length=247bp
MCHSPAFLRPLFNFTRSWSSLSPPPPPTQHRNQYQVMFISKASAVLAAAL
FFLDFPAMAANGVAQKADKATLLKIKQPLRNQIRGLVFSFYVNYAALDGP
LELYANTTDFKAAFYDKPIYAEASNSSEVLGNAFYNIQIFDEVIGSPGSA
EGNYQSVQNVPLLDKKGELKDVYININGRVQYVLAPGQAYPFATAAKILS
ISVSSLETEGIACVNVGVNALNVEGSKLTQYVIDLRKAVCVKQIID*
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Synonyms
Publications