NO21G02570, NO21G02570 (gene) Nannochloropsis oceanica

Overview
NameNO21G02570
Unique NameNO21G02570
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3511
Alignment locationchr21:785023..788533 +

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr21genomechr21:785023..788533 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO21G02570 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL031nonsL031Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR092ngnoR092Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO21G02570.1NO21G02570.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO21G02570.2NO21G02570.2-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO21G02570.1NO21G02570.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO21G02570.2NO21G02570.2Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO21G02570 ID=NO21G02570|Name=NO21G02570|organism=Nannochloropsis oceanica|type=gene|length=3511bp
GGGGAATTGGATCAGCCTCCTGCAGCAGCCGTAGTCCGTTTCGAGTGGGA
GGGTTTCCAGACCTCTTGCAGCCATCCTCCCTCGCTCTCTCCCTCCCTTC
TCCGCTCTCTCTGCCTGTACCTGCAACAACAACGTCTCCATCAACACCCC
CTCCTGCTCTGGAAAATGGTCAAACAGCGCCGTGGCCGAATCGTCCGAAG
GACTGAAAAGAAGGATTGGGAGAGAGGGAGGGATGAACAACAAATCAATC
CATCGACCAACGAACACGGAAAAAGGACCAGAGAGCGGCGATTGTGCGCG
GATACATACCTGCCCTTGGGTGCTGGGAAATCGGAGACTGTGATATCCAG
GAATTTGAGGCCGAATGTCGCTCCAAGCACGACAACCAGCAGCCTATGCA
GGAAGGAGGGGGGAAGATGAGAGGTGAAGGCAGGAAGTTGATGCTGGTAA
AATGTGTCAAATGATGTAGACGTGCAGCCAGTGTTACCTTCGCTCCTTCT
CTCGTCCGCCTGGCTCCCGCCTCGCATCTGACCGCTCTCCCCCTTCCTTC
CCCTCCCTCCCCTTCCTCCCCGTGCTTACCAAAAGGCTAGCACTAGCCAT
CGCAGCCGTTTCATCCATCGCACCCATCGTAAGGCCACCGTGCTGTGGTC
GTGGTGTGTCATGTCCTTCTTCTCTTGTGCGTCTCTGTAAGGGGCAGGGA
GGAAGGGGCCGAAGGAAGGAGGGTTTAGGGTTGTGTTAGTAAGGTGAATG
CATTTTTCTGGCCTTGCGCTGCGGCGTCCTTTCTCATATCTGTACCAGTG
CAGAAGGAATGGGAGCACGGGCGTTGATGACCGTGCTGGTCACGAGTGCC
TTTGGCTTTGCGCTTTGCGGGCGCATACAAATTTCAAGCAAGCATCACAT
GGCGTTCACTCACGCTCCCCAACCCATGCGAACACGTCCGCCCAAAACAA
TGACACAATTTATTTGAAAGAGCTGTCCCAATACGTAAGGCATTGCTGAA
TGTTGTCCTTGGCCTGGCCTTACACGGCCCCTCAAATCCCGTGCCACGGA
CACAGACGACCCAACGTCATGCTTGGAAGCATACTTCCACGCTTCCGCGT
CGTGGCCGCGTGCCGTTGCGCCCCCATCTCATCGCCCCTCCGAGTCAACA
CTTGATGTTTCAACATTGTAATCACTGACTTGATACCGCAGCCACGACTA
CCTGGTAATTTTTTCGTTCTCCTTTGCCTCACTGTATGACCTCTCCAAAT
TTGCGTCTCAGCCGTCCCTGTCATCCCACATCAACACAGTACCCCAAGCT
TCCCCGCGTCGAGTGTTACGTTTTGCAAACCGATGAACATTGGCCCTGGT
GTCAGCACCACGGCGTTAACCCGCCCTGCAAGTAGCAGCAACAATGCCAG
CACTGCCAGGACCAGCACCAGCACCAGCAGCCATGGCCATGACGGCAGCA
AAACCAATGAGGCCAGGCCACAGGTCGAGGAGACCTTCACGGCCACTCTC
AAGCGGCAGTCGATCATCAGCACTGTAGAAATGCTGACTCTGCAGTGTTG
TGACTATCGAGGACGGTGTGAGGCCTTGGAGGATCGGGTGCGTGAACTCG
AGGCAGAGGCCGCTGCAGCTTCAAACGCGTCCACCTCTACTCCCGTTACT
TGCAGTAATACCAGCAACAATACGGACAAGGCCGTCATTGAGCGACAAAG
CAAGGAGATAAGACGCCTGGAGAGCGAGCTACAAGCGGCTCAGAGGGCGC
TCGCCCGTGCTGCTTCTCTATCTTCTGCTCCAGCAATTGCGTCCTTGTCC
TTGGTGGATGGTGCTGCCAAAATTCCTGCTCCTGCTGTCCTTCCCACCAG
CATGTTGACTTCGACACTTGCCACGGACCTGGGACCTGAGGAATGGCGAA
CAAGCAACGATGTAGAATATATTGTAGAACAGCAAGTGCGAGACGAGATC
GCAAACTTTACCACGGATAAGAGCGAACGCCTCCGCTTGCAGAATGCCAT
GGCTGCGGCCTTGGGCCCGGTCTTCCCCCAGCGTCGGGTTAAGCTGGGCT
TCGATCATATCAAGGCTTTTGTGGAGGGATGTTTACTCCTCCTCAAGCAC
GGGGCATTCGATTCTTGGGTCAGTATCGTCTATGTCGAAGCGGAGAGTGC
TAGCCGACGCACTCGGCGTAGCGTCAAGGCTGGAAGAAGTTACGGAGGGA
GCGACGCTGCAAGAAATGCAGGCAGCCGTAGAAGCAGTGGGGTGGATGTC
ACTATAACGACCACAACGACCGCCCCAAGCAGCAGCAGCAACAACAGTAA
TTGTGGCGGGGGCAGTATCAATGGAAACAGCGCCAGTACCAGTAATAAAA
GCGGTACCAGCAGCAAAAGAAACAACAGCGCCAGCAACGGAAGCACTGAC
AGCCCCATCAGCCCCAAGCTGGTCACGCATACCACTGCTATATCCACTAC
CAGCACCTGTAAGAGCAATAGCTGGAGAAACAGCGGTAGCAGTGATGGTG
GCGGTAATGGTGGCCCGCTTTCAACTTTCAAAAAGCCGAGTGCAGCGACC
GCAACTGGGGCACCCCCGGCGGTGGTGAGGAAACGGGGACGTCCCTCTAA
TACATCTAAAGCGACATCCATGGCGTCGTCGTCTTCTCCTTCTCCGAAGA
GACATGTGCTAATAATGTCGTCAACCGGGGCGGATTCTTTGTCAAACAGG
TTTTATGAAGCCATGAACGAgtaagtgtatatgtaagtgtttgtcttaat
tatagtttaaatgctagtttaacattcttcattgcttcatccttggtctt
tcgtgtatattaccgtataacacgctatttgtccgtcctaagtgtactgt
cattgctattgatcctgagttagtaatcctcatgcatatcaccttccaca
ctttgtgtcgcatcattactctgcgccgagaagtttttctctcagttttg
ctttcgtgtcatcattattcactaaccactcctccgaccgcccaacactc
tcctatataaatatatccacatcaaccacatcaaaatcaaaaacagGCGC
GTCTATCAAGTCTATAAGACACGAAACACCCCCTTGTTCATCGCAAGTGT
CTTTCAGGATTTGTTTCCTAAAGGCCTCCCTTTTGCAACGGTCGACGCTT
TTTTCACTCGTCTTGCCATCTCCGAAGAGCTGCAGCTGGTGCTAGCCCAG
GCTCGAGAAGTCCATAAGAACCGCAATATTCAGTACGATAAATTTGTGAA
GAGACTTATGGAAATGGCGGGCCTGTCACCAAATGTGCTTCGTGCCATGT
ACGCGTCAAGGATGGATGAGGCAGAGAAGGGGGGGAAGTAGAGGATAGGA
AAAGAGTGGGGGAGGGAGGAAGGAAGCAACGGGGAGACAGTGTATGGATG
CCTGGCTCCTATCGAATCGGGTTGTAGAATGTAGAAATCACTACCGTTCA
TGAATTGGTTTAGCGAGCATTCAGAGGCGGAATGAAAGACTGAGAGCAGA
GATGGGGTACG
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protein sequence of NO21G02570.1

>NO21G02570.1-protein ID=NO21G02570.1-protein|Name=NO21G02570.1|organism=Nannochloropsis oceanica|type=polypeptide|length=464bp
MNIGPGVSTTALTRPASSSNNASTARTSTSTSSHGHDGSKTNEARPQVEE
TFTATLKRQSIISTVEMLTLQCCDYRGRCEALEDRVRELEAEAAAASNAS
TSTPVTCSNTSNNTDKAVIERQSKEIRRLESELQAAQRALARAASLSSAP
AIASLSLVDGAAKIPAPAVLPTSMLTSTLATDLGPEEWRTSNDVEYIVEQ
QVRDEIANFTTDKSERLRLQNAMAAALGPVFPQRRVKLGFDHIKAFVEGC
LLLLKHGAFDSWVSIVYVEAESASRRTRRSVKAGRSYGGSDAARNAGSRR
SSGVDVTITTTTTAPSSSSNNSNCGGGSINGNSASTSNKSGTSSKRNNSA
SNGSTDSPISPKLVTHTTAISTTSTCKSNSWRNSGSSDGGGNGGPLSTFK
KPSAATATGAPPAVVRKRGRPSNTSKATSMASSSSPSPKRHVLIMSSTGA
DSLSNRFYEAMNE*
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protein sequence of NO21G02570.2

>NO21G02570.2-protein ID=NO21G02570.2-protein|Name=NO21G02570.2|organism=Nannochloropsis oceanica|type=polypeptide|length=561bp
MNIGPGVSTTALTRPASSSNNASTARTSTSTSSHGHDGSKTNEARPQVEE
TFTATLKRQSIISTVEMLTLQCCDYRGRCEALEDRVRELEAEAAAASNAS
TSTPVTCSNTSNNTDKAVIERQSKEIRRLESELQAAQRALARAASLSSAP
AIASLSLVDGAAKIPAPAVLPTSMLTSTLATDLGPEEWRTSNDVEYIVEQ
QVRDEIANFTTDKSERLRLQNAMAAALGPVFPQRRVKLGFDHIKAFVEGC
LLLLKHGAFDSWVSIVYVEAESASRRTRRSVKAGRSYGGSDAARNAGSRR
SSGVDVTITTTTTAPSSSSNNSNCGGGSINGNSASTSNKSGTSSKRNNSA
SNGSTDSPISPKLVTHTTAISTTSTCKSNSWRNSGSSDGGGNGGPLSTFK
KPSAATATGAPPAVVRKRGRPSNTSKATSMASSSSPSPKRHVLIMSSTGA
DSLSNRFYEAMNERVYQVYKTRNTPLFIASVFQDLFPKGLPFATVDAFFT
RLAISEELQLVLAQAREVHKNRNIQYDKFVKRLMEMAGLSPNVLRAMYAS
RMDEAEKGGK*
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Synonyms
Publications