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Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| chr21 | genome | chr21:731625..735484 - |
Analyses
This mRNA is derived from or has results from the following analyses
Homology
BLAST of NO21G02420.2 vs.
Match: EWM29475.1 (hypothetical protein Naga_100128g9 [Nannochloropsis gaditana]) HSP 1 Score: 586.3 bits (1510), Expect = 1.100e-163 Identity = 276/420 (65.71%), Postives = 329/420 (78.33%), Query Frame = 0
Query: 152 MESRYADLAVAKSDYPFCAWDATTDESIYTPLLLDPNAVYQPQVLSFAAHPDRVYKVSAAFPKVIYFSYQSYTLRGLPLTSLSDRHIWPSSGKNPYREEAREDEMGTYDIHVTREGNKGWANEVRGLREDRTNGTRTPYTRVVDFLENLSILMLRFYTPEQPPSVWGGVAPPVITYSDDDGKNWTELKPCTDATRYLFNKAMKQIGWSGYELHDLFLHSQWYRLRSCDLLGVPEADTPTLLPSINLDGPGSASYVPYANYDSSYLHWCTDGRQLGKDFVMVIEGTAPLTATGLFEGTRQVWNVSSYSVRYWGFAAADIFLPGPTYSSITATEMEAFYGGEGWDRRYKILGARSREVAKACGLDDPGALLLPFRNDKLNNNPPAIPAVIEREMLPTHIATNQPPEVQSIDYVTANCKKVGK 572
MESRYADLA+A S+YPFCAWDATTDESIYTPLLLDPNAVYQPQ+LSFAAHP RVYK+SA+FP+V+YFSY++Y+LRG PLTSL D I PS GKNPYREE E+ GTY+I+VTR+GNKGW NEVRGL ED TN T+ ++RV+DF++NLS++MLR YT EQPPSVWGGV PVI+Y+DD G+ W EL+PC+D TRY FN+AM+QIGW+ Y+ L HSQWYRLRSC LL EAD P L P +N+ QLG +FVMVIEGTAPLTATGLFEG R VWNV++YS RYW FAAAD+F+PGPTYSS+TA +ME FY G+GWDRRYKI+GA S ++ KACGLDDP AL LP++N+ +NNNPPA+PAVIEREML H+A P + QSI+YVT+NC K K
Sbjct: 1 MESRYADLAIASSEYPFCAWDATTDESIYTPLLLDPNAVYQPQLLSFAAHPHRVYKISASFPRVVYFSYETYSLRGHPLTSLPDLRIDPSWGKNPYREETTEEGAGTYEIYVTRDGNKGWPNEVRGLSEDHTNATQAAFSRVMDFVDNLSVVMLRLYTTEQPPSVWGGVDRPVISYTDDLGQTWKELQPCSDTTRYQFNRAMRQIGWTVYDFRYLIYHSQWYRLRSCHLLSKREADHPALFPDVNV--------------------------QLGGNFVMVIEGTAPLTATGLFEGPRPVWNVTNYSTRYWSFAAADVFVPGPTYSSLTAQDMENFY-GKGWDRRYKIVGATSIDIVKACGLDDPHALFLPYKNELMNNNPPAVPAVIEREMLARHMAMGLPSDKQSIEYVTSNCGKENK 393
The following BLAST results are available for this feature:
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >NO21G02420.2 ID=NO21G02420.2|Name=NO21G02420.2|organism=Nannochloropsis oceanica|type=mRNA|length=1972bp
GCCCATTGTGGGGCGGTCGTCTCCCGTCATATGGCTGCAGGTTAGCCAGC
AAGCGTATTCCTTATCCCTGATGCAATTTCACACGTGATTTGTTAAGGAC
ATATTTCCATCCCTACGTATACATCTATATGACCTCACTGACTGATCTGT
TTTCTCCTCTCACACATCGCACGACATGCAAATTTCTCTTTGCCAAGCCG
CGAGAATTCATAAGATACCCATGTCATCGTCTCGTCAGAAAAGGCTGCGG
CCGCGGGCCTGGGCATGCTCCTGCTTTCTTATCCTAGATCACCTCGTGGT
TTGTTCGTCATCCCCAGTGTCTTTGTCGGGCACCCCCGCTTTCATGAAGG
AAGAGATGGACATATCTTTCATTCCTTCATCATCTCTCCTCGACCTAACC
CACGAATCGAAAGCTGCTTACCTCTCCTTTCCCCCCAAGCTCTCTCCTTG
GGAAGATGATCCTGTCGTACTCGTCACTGGGCCTAGCGATGACAACAGCC
GAGAAGAAGATAGAAACACTATCGCTATCGACCAAGACCTTCAATTTAAT
AAGCACGACGACGACAGCAGCCCTTCCATTCCGCCTGATGACCCTAACTC
CTCCCGCTCCTGGCGCTCACGCTGGCGAATGGAATCGCGCTACGCGGATT
TGGCCGTGGCGAAGAGTGACTACCCTTTTTGCGCCTGGGATGCCACAACG
GACGAAAGTATTTACACGCCCTTGCTGCTGGATCCAAATGCTGTGTACCA
GCCGCAAGTGCTTTCCTTTGCTGCCCATCCGGATAGGGTGTACAAGGTCT
CGGCGGCGTTCCCTAAGGTGATTTACTTTTCCTACCAGAGCTACACCTTG
AGAGGGCTTCCTCTCACCTCCCTATCCGACCGGCATATCTGGCCAAGCAG
CGGGAAGAACCCGTACAGGGAGGAAGCGAGGGAGGACGAGATGGGCACGT
ACGACATTCACGTGACGCGCGAAGGAAACAAGGGCTGGGCGAACGAGGTT
CGGGGTTTGCGCGAAGACAGAACCAACGGCACTCGGACGCCCTACACTCG
CGTAGTGGACTTCCTTGAGAATCTCTCCATCCTCATGCTTCGATTCTACA
CACCCGAGCAGCCCCCCAGTGTCTGGGGAGGGGTGGCCCCACCTGTGATT
ACATACAGCGATGACGATGGCAAAAACTGGACGGAACTCAAGCCCTGCAC
GGATGCAACCCGCTACTTATTTAACAAGGCCATGAAACAGATAGGCTGGA
GCGGCTACGAGCTCCATGATTTATTCCTCCACTCTCAATGGTACCGCCTG
CGTTCGTGTGATTTATTGGGCGTGCCGGAAGCCGACACCCCGACGCTCCT
CCCCAGCATCAATCTCGACGGGCCCGGCAGTGCGTCTTACGTCCCGTACG
CCAACTACGATTCTTCATATCTGCATTGGTGCACGGATGGACGCCAACTG
GGCAAAGATTTTGTTATGGTCATCGAAGGAACAGCGCCTTTGACGGCCAC
TGGTCTTTTTGAGGGGACAAGGCAAGTGTGGAATGTGTCAAGTTACAGCG
TCAGGTACTGGGGATTCGCCGCCGCCGACATTTTTCTCCCCGGGCCGACC
TACAGCAGCATCACGGCCACGGAGATGGAGGCATTTTATGGAGGGGAAGG
GTGGGACCGACGCTACAAGATCCTGGGGGCACGCTCCAGAGAAGTGGCAA
AGGCGTGTGGTCTCGACGACCCCGGAGCACTCTTGCTTCCCTTTCGGAAC
GACAAGCTCAACAACAATCCACCTGCCATCCCTGCCGTCATCGAGAGAGA
GATGCTTCCCACTCATATCGCCACCAACCAACCTCCGGAAGTTCAGTCAA
TCGATTACGTGACGGCTAATTGCAAAAAGGTAGGTAAGGAGGGACGGAGA
GAGGAGGGAGGGAAGGAGAGGAGAAAAGGAGGGAGGGACTAGACATGCAC
TTGATCGTTATCCTAATTTCTC back to topprotein sequence of NO21G02420.2 >NO21G02420.2-protein ID=NO21G02420.2-protein|Name=NO21G02420.2|organism=Nannochloropsis oceanica|type=polypeptide|length=589bp
MQISLCQAARIHKIPMSSSRQKRLRPRAWACSCFLILDHLVVCSSSPVSL
SGTPAFMKEEMDISFIPSSSLLDLTHESKAAYLSFPPKLSPWEDDPVVLV
TGPSDDNSREEDRNTIAIDQDLQFNKHDDDSSPSIPPDDPNSSRSWRSRW
RMESRYADLAVAKSDYPFCAWDATTDESIYTPLLLDPNAVYQPQVLSFAA
HPDRVYKVSAAFPKVIYFSYQSYTLRGLPLTSLSDRHIWPSSGKNPYREE
AREDEMGTYDIHVTREGNKGWANEVRGLREDRTNGTRTPYTRVVDFLENL
SILMLRFYTPEQPPSVWGGVAPPVITYSDDDGKNWTELKPCTDATRYLFN
KAMKQIGWSGYELHDLFLHSQWYRLRSCDLLGVPEADTPTLLPSINLDGP
GSASYVPYANYDSSYLHWCTDGRQLGKDFVMVIEGTAPLTATGLFEGTRQ
VWNVSSYSVRYWGFAAADIFLPGPTYSSITATEMEAFYGGEGWDRRYKIL
GARSREVAKACGLDDPGALLLPFRNDKLNNNPPAIPAVIEREMLPTHIAT
NQPPEVQSIDYVTANCKKVGKEGRREEGGKERRKGGRD* back to topmRNA from alignment at chr21:731625..735484- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >NO21G02420.2 ID=NO21G02420.2|Name=NO21G02420.2|organism=Nannochloropsis oceanica|type=mRNA|length=3860bp|location=Sequence derived from alignment at chr21:731625..735484- (Nannochloropsis oceanica)
GCCCATTGTGGGGCGGTCGTCTCCCGTCATATGGCTGCAGGTTAGCCAGC
AAGCGTATTCCTTATCCCTGATGCAATTTCACACGTGATTTGTTAAGGAC
ATATTTCCATCCCTACGTATACATCTATATGACCTCACTGACTGATCTGT
TTTCTCCTCTCACACATCGCACGACATGCAAATTTCTCTTTGCCAAGCCG
CGAGAATTCATAAGATACCCATGTCATCGTCTCGTCAGAAAAGGCTGCGG
CCGCGGGCCTGGGCATGCTCCTGCTTTCTTATCCTAGATCACCTCGTGGT
TTGTTCGTCATCCCCAGTGTCTTTGTCGGGGTGAGTGTGGAAAAGAAGGA
GAACGAAAAAGAACGGGATATGCACCTCTCTCCTTCTTCGCCTTGATTCA
TACCTCGACTTAACCCTACATAAACAGCACCCCCGCTTTCATGAAGGAAG
AGATGGACATATCTTTCATTCCTTCATCATCTCTCCTCGACCTAACCCAC
GAATCGAAAGCTGCTTACCTCTCCTTTCCCCCCAAGCTCTCTCCTTGGGA
AGATGATCCTGTCGTACTCGTCACTGGGCCTAGCGATGACAACAGCCGAG
AAGAAGATAGAAACACTATCGCTATCGACCAAGACCTTCAATTTAATAAG
CACGACGACGACAGCAGCCCTTCCATTCCGCCTGATGACCCTAACTCCTC
CCGCTCCTGGCGCTCACGCTGGCGAATGGAATCGCGCTACGCGGATTTGG
CCGTGGCGAAGAGTGACTACCCTTTTTGCGCCTGGGATGCCACAACGGAC
GAAAGTATTTACACGCCCTTGCTGCTGGATCCAAATGCTGTGTACCAGCC
GCAAGTGCTTTCCTTTGCTGCCCATCCGGATAGGGTGTACAAGGTAGCAA
CGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGG
AGGGAGGGGAGGGAGTGGAGGGAGAGAGAAGTGTGGGTTTAAGATAAAAA
AATTGCTTTTCCGAGCTTCTCTAAATGGAGTGACAACCCACATCATGTCC
GCGAGCTGCGAATGGTGCTGTTCGCCTCCATCTTCAATCCGCCCCCTGAC
CCCTCCCTCCCTCCCTCCCTCCTTCCCTCCCTCCCTCCCTCCCTCTCCCA
GGTCTCGGCGGCGTTCCCTAAGGTGATTTACTTTTCCTACCAGAGCTACA
CCTTGAGAGGGCTTCCTCTCACCTCCCTATCCGACCGGCATATCTGGCCA
AGCAGCGGGAAGAACCCGTACAGGGAGGAAGCGAGGGAGGACGAGATGGG
CACGTACGACATTCACGTGACGCGCGAAGGTAGGTAGGCATGTAGGGAGG
GAGGGAGGGAGGGAGGGTGGGAATTGGGAAGAAAAGTATAAAAAGCAAGG
GGAGTGACGACGAAGGGTGGGAAGTGCGGTATCGATGGGAGGCGCGGGGT
CAGAGAGGGACAGAAGGAGGGAGGAAAAGAAGCCCCTTGCCATCTTGAAG
CTTACTCCACAAACTCATTTCGCGCTCTTTCTTCTTCCTTCCCTCCCTCC
CTCTCTCCCTTCCTTCTTCCCCCTCCTTATCTCCTCCCCCCCTGAAGGAA
ACAAGGGCTGGGCGAACGAGGTTCGGGGTTTGCGCGAAGACAGAACCAAC
GGCACTCGGACGCCCTACACTCGCGTAGTGGTAGGGGGGGAGGGAGAAAG
GGAGGGAGGTTGAGAACGATTCCCAAGGGGTAGCATACGTACTTAAGGGC
TTAAGAGTGATGAGCTCCCACCAATTCTGTCCTTGGCATTCAACGCTCTT
ATCTCTTTGATCTCATGCCCTCTTCTCCCGTCCCTCCTTTCCTCCCTCCT
CCCCTCCCTCCCTCCCTACTTGCCGTTGCACGTCATCGCAGGCTGGACCC
GCTTTTTTCGGATACTGACCATTCCTCCCTTTCTATCTCCCTCCCTCCCT
CCCTCACTTCCTCCATTAGGACTTCCTTGAGAATCTCTCCATCCTCATGC
TTCGATTCTACACACCCGAGCAGCCCCCCAGTGTCTGGGGAGGGGTGGCC
CCACCTGTGATTACATACAGCGGTGAGGAGGGTGATGGGGAGGGAGGGAG
GGAGGAGAGGAGGGAAGAACAGCCTGCGCCTCTGCAATGAGGAGTGAGGG
AGGCAGGGAGGGAGGGAGGGAGGGAGGGAGGAACGGCATGTGCCACACAC
ACATTTTGATACCCTCAGTACGTGACACTTACTACTCTCCCTCCATCGCT
CCTTCTCTCCCCTTTTCCCACCCGCAGATGACGATGGCAAAAACTGGACG
GAACTCAAGCCCTGCACGGATGCAACCCGCTACTTATTTAACAAGGCCAT
GAAACAGATAGGTATGAAGGGAGGGAGGGAGGGAAGGAAGGAGGGGGGAG
GTGGGGGGCGCATTGAAAACGCACAATTGTCTGGCTCCTCGCCACACCGA
CCTCTCATGGTCAATCAACGCCCTCCCTTCCTCCTTTCCTCCCTCCTTCC
CTCCTCTCTCTCTTAAGGACTGAAGCGGCCGTGAGTCCTCCTATCGCTCT
GATTAGCACCGTCATGGTTGCCGTACCTTGCTCACCCTCCCTCCCTCCCC
CACCTCCCACATTCCTCAGGCTGGAGCGGCTACGAGCTCCATGATTTATT
CCTCCACTCTCAATGGTACCGCCTGCGTTCGTGTGATTTATTGGGCGTGC
CGGAAGCCGACACCCCGACGCTCCTCCCCAGCATCAATCTCGACGGGCCC
GGCAGTGCGTCTTACGTCCCGTACGCCAACTACGATTCTTCATATCTGCA
TTGGTGCACGGATGGACGCCAAGTACGTGTGTATGGGTGTTTGTGGGACG
TTTTCTTCTAGAAGCTTTTTATTGCCCTTCCAGCTCCCTTTTGTGTGCTC
CTGGATTGGGGTCGCGCTGTTTTTGACCGCCTTCCTCCCCCTTCCTTCCC
TCCCCCTTTCCTTGTTGCCTTCCAGCTGGGCAAAGATTTTGTTATGGTCA
TCGAAGGAACAGCGCCTTTGACGGCCACTGGTCTTTTTGAGGGGACAAGG
CAAGTGTGGAATGTGTCAAGTTACAGCGTCAGGTAGGGAGGACGCAGGGA
ACGACGGAGAAGGGTCAAAATACGCGATATCGTCATCTGCCTTCCTCTCT
CCCTTCTTCCCAACCCCCCGTCGTCCTCACTGCCTAAGACCTGCATCTGC
TCAAGACCAGCTCCTCTACATTTGTCCATGGATCATCCACAGCTTAACTC
CTCTCTCCCTTCCTTCCTTCCTTCCTCCCTTCCTCCCTCCCTTCCATCCT
CCCTCCCTGCCTCCCTCCCTCTGTCCTTTCCATATTAAGGTACTGGGGAT
TCGCCGCCGCCGACATTTTTCTCCCCGGGCCGACCTACAGCAGCATCACG
GCCACGGAGATGGAGGCATTTTATGGAGGGGAAGGGTGGGACCGACGCTA
CAAGATCCTGGGGGCACGCTCCAGAGAAGTGGCAAAGGTACGAATGGTCT
CGCCCCTCCTTCCCCCCCTCGTTCCCTGCGTCTCTTTTATCCCCCATTTC
ACTTCCTCCCCTCCCTTCCGCTCCAATTTTTCCCTTTTAGGCGTGTGGTC
TCGACGACCCCGGAGCACTCTTGCTTCCCTTTCGGAACGACAAGCTCAAC
AACAATCCACCTGCCATCCCTGCCGTCATCGAGAGAGAGATGCTTCCCAC
TCATATCGCCACCAACCAACCTCCGGAAGTTCAGTCAATCGATTACGTGA
CGGCTAATTGCAAAAAGGTAGGTAAGGAGGGACGGAGAGAGGAGGGAGGG
AAGGAGAGGAGAAAAGGAGGGAGGGACTAGACATGCACTTGATCGTTATC
CTAATTTCTC back to topCoding sequence (CDS) from alignment at chr21:731625..735484- >NO21G02420.2 ID=NO21G02420.2|Name=NO21G02420.2|organism=Nannochloropsis oceanica|type=CDS|length=1767bp|location=Sequence derived from alignment at chr21:731625..735484- (Nannochloropsis oceanica)
ATGCAAATTTCTCTTTGCCAAGCCGCGAGAATTCATAAGATACCCATGTC
ATCGTCTCGTCAGAAAAGGCTGCGGCCGCGGGCCTGGGCATGCTCCTGCT
TTCTTATCCTAGATCACCTCGTGGTTTGTTCGTCATCCCCAGTGTCTTTG
TCGGGCACCCCCGCTTTCATGAAGGAAGAGATGGACATATCTTTCATTCC
TTCATCATCTCTCCTCGACCTAACCCACGAATCGAAAGCTGCTTACCTCT
CCTTTCCCCCCAAGCTCTCTCCTTGGGAAGATGATCCTGTCGTACTCGTC
ACTGGGCCTAGCGATGACAACAGCCGAGAAGAAGATAGAAACACTATCGC
TATCGACCAAGACCTTCAATTTAATAAGCACGACGACGACAGCAGCCCTT
CCATTCCGCCTGATGACCCTAACTCCTCCCGCTCCTGGCGCTCACGCTGG
CGAATGGAATCGCGCTACGCGGATTTGGCCGTGGCGAAGAGTGACTACCC
TTTTTGCGCCTGGGATGCCACAACGGACGAAAGTATTTACACGCCCTTGC
TGCTGGATCCAAATGCTGTGTACCAGCCGCAAGTGCTTTCCTTTGCTGCC
CATCCGGATAGGGTGTACAAGGTCTCGGCGGCGTTCCCTAAGGTGATTTA
CTTTTCCTACCAGAGCTACACCTTGAGAGGGCTTCCTCTCACCTCCCTAT
CCGACCGGCATATCTGGCCAAGCAGCGGGAAGAACCCGTACAGGGAGGAA
GCGAGGGAGGACGAGATGGGCACGTACGACATTCACGTGACGCGCGAAGG
AAACAAGGGCTGGGCGAACGAGGTTCGGGGTTTGCGCGAAGACAGAACCA
ACGGCACTCGGACGCCCTACACTCGCGTAGTGGACTTCCTTGAGAATCTC
TCCATCCTCATGCTTCGATTCTACACACCCGAGCAGCCCCCCAGTGTCTG
GGGAGGGGTGGCCCCACCTGTGATTACATACAGCGATGACGATGGCAAAA
ACTGGACGGAACTCAAGCCCTGCACGGATGCAACCCGCTACTTATTTAAC
AAGGCCATGAAACAGATAGGCTGGAGCGGCTACGAGCTCCATGATTTATT
CCTCCACTCTCAATGGTACCGCCTGCGTTCGTGTGATTTATTGGGCGTGC
CGGAAGCCGACACCCCGACGCTCCTCCCCAGCATCAATCTCGACGGGCCC
GGCAGTGCGTCTTACGTCCCGTACGCCAACTACGATTCTTCATATCTGCA
TTGGTGCACGGATGGACGCCAACTGGGCAAAGATTTTGTTATGGTCATCG
AAGGAACAGCGCCTTTGACGGCCACTGGTCTTTTTGAGGGGACAAGGCAA
GTGTGGAATGTGTCAAGTTACAGCGTCAGGTACTGGGGATTCGCCGCCGC
CGACATTTTTCTCCCCGGGCCGACCTACAGCAGCATCACGGCCACGGAGA
TGGAGGCATTTTATGGAGGGGAAGGGTGGGACCGACGCTACAAGATCCTG
GGGGCACGCTCCAGAGAAGTGGCAAAGGCGTGTGGTCTCGACGACCCCGG
AGCACTCTTGCTTCCCTTTCGGAACGACAAGCTCAACAACAATCCACCTG
CCATCCCTGCCGTCATCGAGAGAGAGATGCTTCCCACTCATATCGCCACC
AACCAACCTCCGGAAGTTCAGTCAATCGATTACGTGACGGCTAATTGCAA
AAAGGTAGGTAAGGAGGGACGGAGAGAGGAGGGAGGGAAGGAGAGGAGAA
AAGGAGGGAGGGACTAG back to top
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