Alignments
The following features are aligned
Aligned Feature Feature Type Alignment Location
chr21 genome chr21:731625..735484 -
Analyses
This mRNA is derived from or has results from the following analyses
Homology
BLAST of NO21G02420.2 vs.
Match: EWM29475.1 (hypothetical protein Naga_100128g9 [Nannochloropsis gaditana])
HSP 1 Score: 586.3 bits (1510), Expect = 1.100e-163
Identity = 276/420 (65.71%), Postives = 329/420 (78.33%), Query Frame = 0
Query: 152 MESRYADLAVAKSDYPFCAWDATTDESIYTPLLLDPNAVYQPQVLSFAAHPDRVYKVSAAFPKVIYFSYQSYTLRGLPLTSLSDRHIWPSSGKNPYREEAREDEMGTYDIHVTREGNKGWANEVRGLREDRTNGTRTPYTRVVDFLENLSILMLRFYTPEQPPSVWGGVAPPVITYSDDDGKNWTELKPCTDATRYLFNKAMKQIGWSGYELHDLFLHSQWYRLRSCDLLGVPEADTPTLLPSINLDGPGSASYVPYANYDSSYLHWCTDGRQLGKDFVMVIEGTAPLTATGLFEGTRQVWNVSSYSVRYWGFAAADIFLPGPTYSSITATEMEAFYGGEGWDRRYKILGARSREVAKACGLDDPGALLLPFRNDKLNNNPPAIPAVIEREMLPTHIATNQPPEVQSIDYVTANCKKVGK 572
MESRYADLA+A S+YPFCAWDATTDESIYTPLLLDPNAVYQPQ+LSFAAHP RVYK+SA+FP+V+YFSY++Y+LRG PLTSL D I PS GKNPYREE E+ GTY+I+VTR+GNKGW NEVRGL ED TN T+ ++RV+DF++NLS++MLR YT EQPPSVWGGV PVI+Y+DD G+ W EL+PC+D TRY FN+AM+QIGW+ Y+ L HSQWYRLRSC LL EAD P L P +N+ QLG +FVMVIEGTAPLTATGLFEG R VWNV++YS RYW FAAAD+F+PGPTYSS+TA +ME FY G+GWDRRYKI+GA S ++ KACGLDDP AL LP++N+ +NNNPPA+PAVIEREML H+A P + QSI+YVT+NC K K
Sbjct: 1 MESRYADLAIASSEYPFCAWDATTDESIYTPLLLDPNAVYQPQLLSFAAHPHRVYKISASFPRVVYFSYETYSLRGHPLTSLPDLRIDPSWGKNPYREETTEEGAGTYEIYVTRDGNKGWPNEVRGLSEDHTNATQAAFSRVMDFVDNLSVVMLRLYTTEQPPSVWGGVDRPVISYTDDLGQTWKELQPCSDTTRYQFNRAMRQIGWTVYDFRYLIYHSQWYRLRSCHLLSKREADHPALFPDVNV--------------------------QLGGNFVMVIEGTAPLTATGLFEGPRPVWNVTNYSTRYWSFAAADVFVPGPTYSSLTAQDMENFY-GKGWDRRYKIVGATSIDIVKACGLDDPHALFLPYKNELMNNNPPAVPAVIEREMLARHMAMGLPSDKQSIEYVTSNCGKENK 393
The following BLAST results are available for this feature:
BLAST of NO21G02420.2 vs.
Analysis Date: 2017-10-25 (
Homology annotation for N. oceanica IMET1 )
Total hits: 1
200 400 600 800 1000 1200 1400 1600 1800 Expect = 1.10e-163 / Id = 65.71 Sequence EWM29475.1
Match Name E-value Identity Description
EWM29475.1 1.100e-163 65.71 hypothetical protein Naga_100128g9 [Nannochloropsi... [more]
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Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence
>NO21G02420.2 ID=NO21G02420.2|Name=NO21G02420.2|organism=Nannochloropsis oceanica|type=mRNA|length=1972bp back to top protein sequence of NO21G02420.2
>NO21G02420.2-protein ID=NO21G02420.2-protein|Name=NO21G02420.2|organism=Nannochloropsis oceanica|type=polypeptide|length=589bp back to top mRNA from alignment at chr21:731625..735484-
Legend: polypeptide CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO21G02420.2 ID=NO21G02420.2|Name=NO21G02420.2|organism=Nannochloropsis oceanica|type=mRNA|length=3860bp|location=Sequence derived from alignment at chr21:731625..735484- (Nannochloropsis oceanica)ATGCAAATTTCTCTTTGCCAAGCCG
CGAGAATTCATAAGATACCCATGTCATCGTCTCGTCAGAAAAGGCTGCGG
CCGCGGGCCTGGGCATGCTCCTGCTTTCTTATCCTAGATCACCTCGTGGT
TTGTTCGTCATCCCCAGTGTCTTTGTCGGG GTGAGTGTGGAAAAGAAGGA
GAACGAAAAAGAACGGGATATGCACCTCTCTCCTTCTTCGCCTTGATTCA
TACCTCGACTTAACCCTACATAAACAGCACCCCCGCTTTCATGAAGGAAG
AGATGGACATATCTTTCATTCCTTCATCATCTCTCCTCGACCTAACCCAC
GAATCGAAAGCTGCTTACCTCTCCTTTCCCCCCAAGCTCTCTCCTTGGGA
AGATGATCCTGTCGTACTCGTCACTGGGCCTAGCGATGACAACAGCCGAG
AAGAAGATAGAAACACTATCGCTATCGACCAAGACCTTCAATTTAATAAG
CACGACGACGACAGCAGCCCTTCCATTCCGCCTGATGACCCTAACTCCTC
CCGCTCCTGGCGCTCACGCTGGCGAATGGAATCGCGCTACGCGGATTTGG
CCGTGGCGAAGAGTGACTACCCTTTTTGCGCCTGGGATGCCACAACGGAC
GAAAGTATTTACACGCCCTTGCTGCTGGATCCAAATGCTGTGTACCAGCC
GCAAGTGCTTTCCTTTGCTGCCCATCCGGATAGGGTGTACAAG GTAGCAA
CGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGG
AGGGAGGGGAGGGAGTGGAGGGAGAGAGAAGTGTGGGTTTAAGATAAAAA
AATTGCTTTTCCGAGCTTCTCTAAATGGAGTGACAACCCACATCATGTCC
GCGAGCTGCGAATGGTGCTGTTCGCCTCCATCTTCAATCCGCCCCCTGAC
CCCTCCCTCCCTCCCTCCCTCCTTCCCTCCCTCCCTCCCTCCCTCTCCCA
GGTCTCGGCGGCGTTCCCTAAGGTGATTTACTTTTCCTACCAGAGCTACA
CCTTGAGAGGGCTTCCTCTCACCTCCCTATCCGACCGGCATATCTGGCCA
AGCAGCGGGAAGAACCCGTACAGGGAGGAAGCGAGGGAGGACGAGATGGG
CACGTACGACATTCACGTGACGCGCGAAG GTAGGTAGGCATGTAGGGAGG
GAGGGAGGGAGGGAGGGTGGGAATTGGGAAGAAAAGTATAAAAAGCAAGG
GGAGTGACGACGAAGGGTGGGAAGTGCGGTATCGATGGGAGGCGCGGGGT
CAGAGAGGGACAGAAGGAGGGAGGAAAAGAAGCCCCTTGCCATCTTGAAG
CTTACTCCACAAACTCATTTCGCGCTCTTTCTTCTTCCTTCCCTCCCTCC
CTCTCTCCCTTCCTTCTTCCCCCTCCTTATCTCCTCCCCCCCTGAAGGAA
ACAAGGGCTGGGCGAACGAGGTTCGGGGTTTGCGCGAAGACAGAACCAAC
GGCACTCGGACGCCCTACACTCGCGTAGTG GTAGGGGGGGAGGGAGAAAG
GGAGGGAGGTTGAGAACGATTCCCAAGGGGTAGCATACGTACTTAAGGGC
TTAAGAGTGATGAGCTCCCACCAATTCTGTCCTTGGCATTCAACGCTCTT
ATCTCTTTGATCTCATGCCCTCTTCTCCCGTCCCTCCTTTCCTCCCTCCT
CCCCTCCCTCCCTCCCTACTTGCCGTTGCACGTCATCGCAGGCTGGACCC
GCTTTTTTCGGATACTGACCATTCCTCCCTTTCTATCTCCCTCCCTCCCT
CCCTCACTTCCTCCATTAGGACTTCCTTGAGAATCTCTCCATCCTCATGC
TTCGATTCTACACACCCGAGCAGCCCCCCAGTGTCTGGGGAGGGGTGGCC
CCACCTGTGATTACATACAGCG GTGAGGAGGGTGATGGGGAGGGAGGGAG
GGAGGAGAGGAGGGAAGAACAGCCTGCGCCTCTGCAATGAGGAGTGAGGG
AGGCAGGGAGGGAGGGAGGGAGGGAGGGAGGAACGGCATGTGCCACACAC
ACATTTTGATACCCTCAGTACGTGACACTTACTACTCTCCCTCCATCGCT
CCTTCTCTCCCCTTTTCCCACCCGCAGATGACGATGGCAAAAACTGGACG
GAACTCAAGCCCTGCACGGATGCAACCCGCTACTTATTTAACAAGGCCAT
GAAACAGATAG GTATGAAGGGAGGGAGGGAGGGAAGGAAGGAGGGGGGAG
GTGGGGGGCGCATTGAAAACGCACAATTGTCTGGCTCCTCGCCACACCGA
CCTCTCATGGTCAATCAACGCCCTCCCTTCCTCCTTTCCTCCCTCCTTCC
CTCCTCTCTCTCTTAAGGACTGAAGCGGCCGTGAGTCCTCCTATCGCTCT
GATTAGCACCGTCATGGTTGCCGTACCTTGCTCACCCTCCCTCCCTCCCC
CACCTCCCACATTCCTCAGGCTGGAGCGGCTACGAGCTCCATGATTTATT
CCTCCACTCTCAATGGTACCGCCTGCGTTCGTGTGATTTATTGGGCGTGC
CGGAAGCCGACACCCCGACGCTCCTCCCCAGCATCAATCTCGACGGGCCC
GGCAGTGCGTCTTACGTCCCGTACGCCAACTACGATTCTTCATATCTGCA
TTGGTGCACGGATGGACGCCAA GTACGTGTGTATGGGTGTTTGTGGGACG
TTTTCTTCTAGAAGCTTTTTATTGCCCTTCCAGCTCCCTTTTGTGTGCTC
CTGGATTGGGGTCGCGCTGTTTTTGACCGCCTTCCTCCCCCTTCCTTCCC
TCCCCCTTTCCTTGTTGCCTTCCAGCTGGGCAAAGATTTTGTTATGGTCA
TCGAAGGAACAGCGCCTTTGACGGCCACTGGTCTTTTTGAGGGGACAAGG
CAAGTGTGGAATGTGTCAAGTTACAGCGTCAG GTAGGGAGGACGCAGGGA
ACGACGGAGAAGGGTCAAAATACGCGATATCGTCATCTGCCTTCCTCTCT
CCCTTCTTCCCAACCCCCCGTCGTCCTCACTGCCTAAGACCTGCATCTGC
TCAAGACCAGCTCCTCTACATTTGTCCATGGATCATCCACAGCTTAACTC
CTCTCTCCCTTCCTTCCTTCCTTCCTCCCTTCCTCCCTCCCTTCCATCCT
CCCTCCCTGCCTCCCTCCCTCTGTCCTTTCCATATTAAGGTACTGGGGAT
TCGCCGCCGCCGACATTTTTCTCCCCGGGCCGACCTACAGCAGCATCACG
GCCACGGAGATGGAGGCATTTTATGGAGGGGAAGGGTGGGACCGACGCTA
CAAGATCCTGGGGGCACGCTCCAGAGAAGTGGCAAAG GTACGAATGGTCT
CGCCCCTCCTTCCCCCCCTCGTTCCCTGCGTCTCTTTTATCCCCCATTTC
ACTTCCTCCCCTCCCTTCCGCTCCAATTTTTCCCTTTTAGGCGTGTGGTC
TCGACGACCCCGGAGCACTCTTGCTTCCCTTTCGGAACGACAAGCTCAAC
AACAATCCACCTGCCATCCCTGCCGTCATCGAGAGAGAGATGCTTCCCAC
TCATATCGCCACCAACCAACCTCCGGAAGTTCAGTCAATCGATTACGTGA
CGGCTAATTGCAAAAAGGTAGGTAAGGAGGGACGGAGAGAGGAGGGAGGG
AAGGAGAGGAGAAAAGGAGGGAGGGACTAG back to top Coding sequence (CDS) from alignment at chr21:731625..735484-
>NO21G02420.2 ID=NO21G02420.2|Name=NO21G02420.2|organism=Nannochloropsis oceanica|type=CDS|length=1767bp|location=Sequence derived from alignment at chr21:731625..735484- (Nannochloropsis oceanica) back to top