NO21G02350, NO21G02350 (gene) Nannochloropsis oceanica

Overview
NameNO21G02350
Unique NameNO21G02350
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length4469
Alignment locationchr21:704257..708725 -

Link to JBrowse

Properties
Property NameValue
DescriptionCop9 signalosome complex subunit 2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr21genomechr21:704257..708725 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR036390WH_DNA-bd_sf
IPR000717PCI_dom
Vocabulary: Cellular Component
TermDefinition
GO:0008180COP9 signalosome
GO:0005737cytoplasm
Homology
BLAST of NO21G02350 vs. NCBI_GenBank
Match: EWM29476.1 (cop9 signalosome complex subunit 2 [Nannochloropsis gaditana])

HSP 1 Score: 485.7 bits (1249), Expect = 1.800e-133
Identity = 278/493 (56.39%), Postives = 319/493 (64.71%), Query Frame = 0
Query:   33 YYAAKGLKSQGKLDEALRGMQRMVALEMEREGGRGEWGFKALKQSVKMLFTLGRHEEMLRCYVFLLDNYASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQNVAEKGITSIIDHVSSSLDPSLLHSLYEITLARLNGGR------XXXXXXXXXXXXLWFKTHLKLGHLLLEEAKHADG-------------------------------------------EESNRLLGRLQRAIKELIKSCEAGRKEQDAQEEGNGGVDTIKGGTQLLDVYALQMQVYSLQKDSRKLKDLYKLALRITWGVPHPLTLAVLQECGGKMYMDEKEYDKAIHSFFASFNYYAEVGDPRRLLVLKYLVLASMLHASTIDPFDSQEVKPYKDEPEVVAMRTLILAFQQDDVKTFETILKEHRHALTEDAFIRTHIDQLLRTIRTQVLTKLLIPYKRVSLSHVAHELNDIPQDEVESLLVSLILDGKV 477
            YYAAKGLK+QG L  A+ GMQ +  L +E  G RGEWGFKALKQSVKMLF LG++E ML  YVFLLD+Y                                                  QNVAEKG+ S++D VSSS  PSLL +LY+ TLARL GG                   LWFKT+LKLGHLLL EA   +G                                           EES RLLGRLQR IK+L+KSCE    ++   E+G+ G DTIK GTQLL+VYALQMQ+++LQKDSRKLKDLYKLAL ITWGVPHP TL VLQECGG+MYMDEK+Y+ AI +FF+SF  Y E GDPRR  +LKYLVLASMLHASTIDPFDSQE KPYK+E EVVAMR LILAFQ  DVK FETILK HR ALT+D F+R +IDQLL TIRTQV+TKLL+PY RVSL+H+A ELNDIP+++VESLLVSLILDGKV
Sbjct:   33 YYAAKGLKAQGDLAGAVEGMQEV--LRLEAAGERGEWGFKALKQSVKMLFALGQYEAMLERYVFLLDHYT-----------------------------------VTPASFHGARAAVTQNVAEKGLDSVLDLVSSSSSPSLLRALYDTTLARLEGGEESGREGRAEGGARRRNQRLWFKTNLKLGHLLLSEAMQKEGGEHRAWRPSSLLLPLVSGSIPSGRGSPLILTLHCLLSPSFLPSEESVRLLGRLQRLIKDLLKSCEG--PQEGPGEDGSAGGDTIKRGTQLLEVYALQMQLFALQKDSRKLKDLYKLALGITWGVPHPRTLGVLQECGGRMYMDEKDYNAAIQAFFSSFKCYDEAGDPRRFTLLKYLVLASMLHASTIDPFDSQEAKPYKEEREVVAMRNLILAFQNHDVKAFETILKTHRQALTKDTFVRANIDQLLITIRTQVITKLLVPYTRVSLAHIARELNDIPEEDVESLLVSLILDGKV 486          
BLAST of NO21G02350 vs. NCBI_GenBank
Match: EWM29477.1 (cop9 signalosome complex subunit 2 [Nannochloropsis gaditana])

HSP 1 Score: 388.3 bits (996), Expect = 3.900e-104
Identity = 228/427 (53.40%), Postives = 259/427 (60.66%), Query Frame = 0
Query:   33 YYAAKGLKSQGKLDEALRGMQRMVALEMEREGGRGEWGFKALKQSVKMLFTLGRHEEMLRCYVFLLDNYASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQNVAEKGITSIIDHVSSSLDPSLLHSLYEITLARLNGGR------XXXXXXXXXXXXLWFKTHLKLGHLLLEEAKHADG-------------------------------------------EESNRLLGRLQRAIKELIKSCEAGRKEQDAQEEGNGGVDTIKGGTQLLDVYALQMQVYSLQKDSRKLKDLYKLALRITWGVPHPLTLAVLQECGGKMYMDEKEYDKAIHSFFASFNYYAEVGDPRRLLVLKYLVLASMLHASTIDPFDSQEVKPYKDEPEVVAMRTLILAFQQDDVKTFETILKEH 411
            YYAAKGLK+QG L  A+ GMQ +  L +E  G RGEWGFKALKQSVKMLF LG++E ML  YVFLLD+Y                                                  QNVAEKG+ S++D VSSS  PSLL +LY+ TLARL GG                   LWFKT+LKLGHLLL EA   +G                                           EES RLLGRLQR IK+L+KSCE    ++   E+G+ G DTIK GTQLL+VYALQMQ+++LQKDSRKLKDLYKLAL ITWGVPHP TL VLQECGG+MYMDEK+Y+ AI +FF+SF  Y E GDPRR  +LKYLVLASMLHASTIDPFDSQE KPYK+E EVVAMR LILAFQ  DVK FETILK H
Sbjct:   33 YYAAKGLKAQGDLAGAVEGMQEV--LRLEAAGERGEWGFKALKQSVKMLFALGQYEAMLERYVFLLDHYT-----------------------------------VTPASFHGARAAVTQNVAEKGLDSVLDLVSSSSSPSLLRALYDTTLARLEGGEESGREGRAEGGARRRNQRLWFKTNLKLGHLLLSEAMQKEGGEHRAWRPSSLLLPLVSGSIPSGRGSPLILTLHCLLSPSFLPSEESVRLLGRLQRLIKDLLKSCEG--PQEGPGEDGSAGGDTIKRGTQLLEVYALQMQLFALQKDSRKLKDLYKLALGITWGVPHPRTLGVLQECGGRMYMDEKDYNAAIQAFFSSFKCYDEAGDPRRFTLLKYLVLASMLHASTIDPFDSQEAKPYKEEREVVAMRNLILAFQNHDVKAFETILKVH 420          
BLAST of NO21G02350 vs. NCBI_GenBank
Match: XP_005852701.1 (cop9 signalosome complex subunit 2 [Nannochloropsis gaditana CCMP526] >XP_005855354.1 cop9 signalosome complex subunit 2 [Nannochloropsis gaditana CCMP526] >EKU21011.1 cop9 signalosome complex subunit 2 [Nannochloropsis gaditana CCMP526] >EKU23131.1 cop9 signalosome complex subunit 2 [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 382.1 bits (980), Expect = 2.800e-102
Identity = 236/469 (50.32%), Postives = 271/469 (57.78%), Query Frame = 0
Query:   33 YYAAKGLKSQGKLDEALRGMQRMVALEMEREGGRGEWGFKALKQSVKMLFTLGRHEEMLRCYVFLLDNYASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQNVAEKGITSIIDHVSSSLDPSLLHSLYEITLARLNGGRXXXXXXXXXXXXLWFKTHLKLGHLLLEEAKHADGEESNRLLGRLQRAIKELIKSCEAGRKEQDAQEEGNGGVDTIKGGTQLLDVYALQMQVYSLQKDSRKLKDLYKLALRITWGVPHPLTLAVLQECGGKMYMDEKEYDKAIHSFFASFNYYAEVGDPRRLLVLKYLVLASMLHASTIDPFDSQEVKPYKDEPEVVAMRTLILAFQQDDVKTFETILK--------------------------EHRHALTEDAFIRTHIDQLLRTIRTQVLTKLLIPYKRVSLSHVAHELNDIPQDEVESLLVSLILDGK 476
            YYAAKGLK+QG L  A+ GMQ +  L +E  G RGEWGFKALKQSVKMLF LG++E ML  YVFLLD+Y                                                                   ++ P+  HS       R                 LWFKT+LKLGHLLL EA   +GEES RLLGRLQR IK+L+KSCE     +   E+G+ G DTIK GTQLL+VYALQMQ+++LQKDSRKLKDLYKLAL ITW                       +Y+ AI +FF+SF  Y E GDPRR  +LKYLVLASMLHASTIDPFDSQE KPYK+E EVVAMR LILAFQ  DVK FETILK                           HR ALT D F+R HIDQLL TIRTQV+TKLL+PY RVSL+H+A ELNDIP+++VESLLVSLILDGK
Sbjct:   33 YYAAKGLKAQGDLAGAVEGMQEV--LRLEAAGERGEWGFKALKQSVKMLFALGQYEAMLERYVFLLDHY-------------------------------------------------------------------TVTPASSHSARAAVTQR-----------------LWFKTNLKLGHLLLSEAMQKEGEESVRLLGRLQRLIKDLLKSCEG--PLEGPGEDGSAGGDTIKRGTQLLEVYALQMQLFALQKDSRKLKDLYKLALGITW-----------------------DYNAAIQAFFSSFKCYDEAGDPRRFTLLKYLVLASMLHASTIDPFDSQEAKPYKEEREVVAMRNLILAFQNHDVKAFETILKVLVCLLLYALLPPCPRPLISPLSSLQTHRQALTRDTFVRAHIDQLLITIRTQVITKLLVPYTRVSLAHIARELNDIPEEDVESLLVSLILDGK 390          
BLAST of NO21G02350 vs. NCBI_GenBank
Match: CBN77279.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 330.1 bits (845), Expect = 1.300e-86
Identity = 201/474 (42.41%), Postives = 267/474 (56.33%), Query Frame = 0
Query:   33 YYAAKGLKSQGKLDEALRGMQRMVALEMEREGGRGEWGFKALKQSVKMLFTLGRHEEMLRCYVFLLDNYASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQNVAEKGITSIIDHVSSSLDPSLLHSLYEITLARLNGGRXXXXXXXXXXXXLWFKTHLKLGHLLLEEAKHADGEESNRLLGRLQRAIKELIKSCEAGRKEQDAQEEGNGGVD---TIKGGTQLLDVYALQMQVYSLQKDSRKLKDLYKLALRITWGVPHPLTLAVLQECGGKMYMDEKEYDKAIHSFFASFNYYAEVGDPRRLLVLKYLVLASMLHASTIDPFDSQEVKPYKDEPEVVAMRTLILAFQQDDVKTFETILKEHRHALTEDAFIRTHIDQLLRTIRT------------QVLTKLLIPYKRVSLSHVAHELNDIPQDEVESLLVSLILDGKVSGYIDQTQQMWVRGR 492
            YY+AK LK++     A+   + ++A E E    +G WGFKALKQ +K+LF +   +E   CY  LL                                                     QNV EKG+ S++D+VSSS D  LL   YE TL  L   +            LWFK +LKLGHL+ +  +          +GRLQR IKEL+K+C         + EGNG  D    +K GTQLL++++LQ+ ++S Q+D +KL+++Y+ A +IT  VPHP  +A + ECGGKM+M E+E+D+A  +FF SF  Y E GDP RL VLKYLV+AS+LH S IDPFDSQE KPYK +PE+VAM  L+ AF+   +K FE ILK HR +L  D FI+ +ID +LRT+RT            QVL K + PY RV L ++A ELNDIP  +VE LLVS ILDGKV G IDQ  Q+ + G+
Sbjct:   59 YYSAKALKAEDP-KAAVEAFREVMAQEEE----QGIWGFKALKQMMKLLFKMSAFQEFTDCYTQLL---------------------------------------------GYTKGAVSQNVGEKGVNSVLDYVSSSNDWGLLKGFYEQTLDTLREHK---------NNRLWFKCNLKLGHLMYDVGE----------MGRLQRIIKELLKAC---------KNEGNGDDDDTNAVKRGTQLLEIFSLQILMHSRQRDQKKLREVYERARKITSAVPHPRVVATILECGGKMHMQEREWDQACTAFFQSFKNYDEAGDPERLQVLKYLVMASILHKSEIDPFDSQEAKPYKQDPEIVAMTNLVEAFRNKQIKDFERILKTHRASLMGDPFIKLYIDDILRTMRTQKVSIMSNNTHFQVLLKAIAPYTRVKLPYLAGELNDIPVTDVEDLLVSCILDGKVDGKIDQVNQVVLCGK 454          
BLAST of NO21G02350 vs. NCBI_GenBank
Match: XP_020916005.1 (COP9 signalosome complex subunit 2 [Exaiptasia pallida] >KXJ28781.1 COP9 signalosome complex subunit 2 [Exaiptasia pallida])

HSP 1 Score: 312.4 bits (799), Expect = 2.700e-81
Identity = 188/469 (40.09%), Postives = 262/469 (55.86%), Query Frame = 0
Query:   33 YYAAKGLKSQGKLDEALRGMQRMVALEMEREGGRGEWGFKALKQSVKMLFTLGRHEEMLRCYVFLLDNYASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQNVAEKGITSIIDHVSSSLDPSLLHSLYEITLARLNGGRXXXXXXXXXXXXLWFKTHLKLGHLLLEEAKHADGEESNRLLGRLQRAIKELIKSCEAGRKEQDAQEEGNGGVDTIKGGTQLLDVYALQMQVYSLQKDSRKLKDLYKLALRITWGVPHPLTLAVLQECGGKMYMDEKEYDKAIHSFFASFNYYAEVGDPRRLLVLKYLVLASMLHASTIDPFDSQEVKPYKDEPEVVAMRTLILAFQQDDVKTFETILKEHRHALTEDAFIRTHIDQLLRTIRTQVLTKLLIPYKRVSLSHVAHELNDIPQDEVESLLVSLILDGKVSGYIDQTQQMWVRGREGEGGKYFVG 502
            YY +K LK       AL+  Q+++ LE E    +GEWGFKALKQ +K+ F LG+H+EM+  Y  LL    S                                                +N +EK I SI+D++S+S    LL + YE TL  L   +            LWFKT+ KLG L  + ++            +L + +K+L +SC+            + G D +K GTQLL++YAL++Q+Y+ QK+++KLK LY+ +L I   +PHPL + V++ECGGKM++ E +Y+KA   FF +F  Y E G PRR   LKYLVLA+ML  S I+PFDSQE KPYK++PE++AM  L+ A+Q DD+  FE ILK +R  + +D FIR HI+ LLR IRTQVL KL+ PY R+ +  ++ ELN I +DEVESLLVS ILD  + G IDQ  Q+    R+ +    F G
Sbjct:   36 YYNSKALKEDDP-KAALQNFQKVLDLEQE----KGEWGFKALKQMIKINFKLGKHDEMMTRYKQLLTYIKS---------------------------------------------AVTRNHSEKSINSILDYISTSKQMELLQNFYETTLDALRDAK---------NDRLWFKTNTKLGKLYYDRSE----------FNKLAKILKQLHQSCQT-----------DEGEDDLKKGTQLLEIYALEIQMYTSQKNNKKLKALYEQSLHIKSAIPHPLIMGVIRECGGKMHLREGDYEKAHTDFFEAFKNYDESGSPRRTTCLKYLVLANMLMKSGINPFDSQEAKPYKNDPEILAMTNLVSAYQNDDINEFEKILKTNRKNIMDDQFIREHIEDLLRNIRTQVLIKLIKPYTRIHIPFISQELN-IDKDEVESLLVSCILDNTIHGRIDQVNQLLELDRKSQSTDRFTG 423          
BLAST of NO21G02350 vs. NCBI_GenBank
Match: XP_023337931.1 (COP9 signalosome complex subunit 2-like [Eurytemora affinis] >XP_023343939.1 COP9 signalosome complex subunit 2-like [Eurytemora affinis])

HSP 1 Score: 310.5 bits (794), Expect = 1.000e-80
Identity = 193/463 (41.68%), Postives = 259/463 (55.94%), Query Frame = 0
Query:   33 YYAAKGLKSQGKLDEALRGMQRMVALEMEREGGRGEWGFKALKQSVKMLFTLGRHEEMLRCYVFLLDNYASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQNVAEKGITSIIDHVSSSLDPSLLHSLYEITLARLNGGRXXXXXXXXXXXXLWFKTHLKLGHLLLEEAKHADGEESNRLLGRLQRAIKELIKSCEAGRKEQDAQEEGNGGVDTIKGGTQLLDVYALQMQVYSLQKDSRKLKDLYKLALRITWGVPHPLTLAVLQECGGKMYMDEKEYDKAIHSFFASFNYYAEVGDPRRLLVLKYLVLASMLHASTIDPFDSQEVKPYKDEPEVVAMRTLILAFQQDDVKTFETILKEHRHALTEDAFIRTHIDQLLRTIRTQVLTKLLIPYKRVSLSHVAHELNDIPQDEVESLLVSLILDGKVSGYIDQTQQMWVRGREGEG 496
            YY +K LK  G    AL   QR++ LE    G +GEWGFKALKQ +K+ F L  ++EM+R Y  LL    +                                                +N +EK I SI+D++S+S    LL + YE TL  L   +            LWFKT  KLG L      + D EE N    RL R +K+L +SC+            + G D +K GTQLL+VYAL++Q+Y+ QK+++KLK LY  +L I   +PHPL L V++ECGGKM++ E E++KA   FF +F  Y E G PRR   LKYLVLA+ML  S I+PFDSQE KPYK++PE++AM  L+ A+Q +D+  FE ILK++R  + ED FIR HI+ LL+ IRTQVL KL+ PY R+ +  ++ ELN  P D VE+LLVS ILD  +SG IDQ + +    R  EG
Sbjct:   35 YYNSKALKETGP-KAALESFQRVLDLE---NGEKGEWGFKALKQMIKINFRLDNYDEMMRRYKQLLTYIKT---------------------------------------------AVTRNHSEKSINSILDYISTSRQMELLQNFYETTLDALRDAK---------NERLWFKTMTKLGKL------YFDREEFN----RLARVLKQLRQSCQT-----------DEGEDDLKKGTQLLEVYALEIQMYTAQKNNKKLKALYDQSLHIKSAIPHPLILGVIRECGGKMHLREGEFEKAHTDFFEAFKNYDESGSPRRTTCLKYLVLANMLMKSGINPFDSQEAKPYKNDPEILAMTNLVTAYQNNDINEFEKILKQNRQTIMEDTFIREHIEDLLKNIRTQVLIKLIRPYTRIQIGFISGELNIEPGD-VENLLVSCILDSTISGRIDQVRGVLELDRAPEG 417          
BLAST of NO21G02350 vs. NCBI_GenBank
Match: XP_019615934.1 (PREDICTED: COP9 signalosome complex subunit 2 [Branchiostoma belcheri])

HSP 1 Score: 310.1 bits (793), Expect = 1.400e-80
Identity = 190/463 (41.04%), Postives = 261/463 (56.37%), Query Frame = 0
Query:   33 YYAAKGLKSQGKLDEALRGMQRMVALEMEREGGRGEWGFKALKQSVKMLFTLGRHEEMLRCYVFLLDNYASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQNVAEKGITSIIDHVSSSLDPSLLHSLYEITLARLNGGRXXXXXXXXXXXXLWFKTHLKLGHLLLEEAKHADGEESNRLLGRLQRAIKELIKSCEAGRKEQDAQEEGNGGVDTIKGGTQLLDVYALQMQVYSLQKDSRKLKDLYKLALRITWGVPHPLTLAVLQECGGKMYMDEKEYDKAIHSFFASFNYYAEVGDPRRLLVLKYLVLASMLHASTIDPFDSQEVKPYKDEPEVVAMRTLILAFQQDDVKTFETILKEHRHALTEDAFIRTHIDQLLRTIRTQVLTKLLIPYKRVSLSHVAHELNDIPQDEVESLLVSLILDGKVSGYIDQTQQMWVRGREGEG 496
            YY +K LK +     AL   Q+++ LE E    +GEWGFKALKQ +K+ F LG +EEM++ Y  LL    +                                                +N +EK I SI+D++S+S +  LL + YE TL  L   +            LWFKT+ KLG L      + D EE N    +L + +K+L +SC+            + G D +K GTQLL++YAL++Q+Y+ QK+++KLK LY+ +L I   +PHPL + V++ECGGKM++ E EY+KA   FF +F  Y E G PRR   LKYLVLA+ML  S I+PFDSQE KPYK++PE++AM  L+ A+Q +D+  FE ILK +R  + +D FIR HI+ LLR IRTQVL KL+ PY R+ +  +A ELN I   EVESLLVS ILD  ++G IDQ  Q+    R   G
Sbjct:   49 YYNSKALKEEDP-KAALESFQKVLDLEEE----KGEWGFKALKQMIKINFKLGNYEEMMKRYKQLLTYIKT---------------------------------------------AVTRNYSEKSINSILDYISTSKNMELLQNFYETTLEALKDAK---------NDRLWFKTNTKLGKL------YYDREEFN----KLAKILKQLHQSCQT-----------DEGEDDLKKGTQLLEIYALEIQMYTAQKNNKKLKALYEQSLHIKSAIPHPLIMGVIRECGGKMHLREGEYEKAHTDFFEAFKNYDESGSPRRTTCLKYLVLANMLMKSGINPFDSQEAKPYKNDPEILAMTNLVSAYQNNDINEFEKILKTNRKNIMDDPFIREHIEDLLRNIRTQVLIKLIKPYTRIHIPFIAKELN-IDVSEVESLLVSCILDSTINGRIDQVNQLLELDRSTHG 430          
BLAST of NO21G02350 vs. NCBI_GenBank
Match: XP_005089070.1 (PREDICTED: COP9 signalosome complex subunit 2 isoform X2 [Aplysia californica])

HSP 1 Score: 309.7 bits (792), Expect = 1.800e-80
Identity = 189/463 (40.82%), Postives = 256/463 (55.29%), Query Frame = 0
Query:   33 YYAAKGLKSQGKLDEALRGMQRMVALEMEREGGRGEWGFKALKQSVKMLFTLGRHEEMLRCYVFLLDNYASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQNVAEKGITSIIDHVSSSLDPSLLHSLYEITLARLNGGRXXXXXXXXXXXXLWFKTHLKLGHLLLEEAKHADGEESNRLLGRLQRAIKELIKSCEAGRKEQDAQEEGNGGVDTIKGGTQLLDVYALQMQVYSLQKDSRKLKDLYKLALRITWGVPHPLTLAVLQECGGKMYMDEKEYDKAIHSFFASFNYYAEVGDPRRLLVLKYLVLASMLHASTIDPFDSQEVKPYKDEPEVVAMRTLILAFQQDDVKTFETILKEHRHALTEDAFIRTHIDQLLRTIRTQVLTKLLIPYKRVSLSHVAHELNDIPQDEVESLLVSLILDGKVSGYIDQTQQMWVRGREGEG 496
            YY +K LK       AL   Q+++ LE +    +GEWGFKALKQ +K+ F LG ++EM+  Y  LL    S                                                +N +EK I SI+D++S+S    LL   YE TL  L   +            LWFKT+ KLG L  +   +           RLQR +K+L +SC+            + G D +K GTQLL++YAL++Q+Y+ QK+++KLK LY+ +L I   +PHPL + V++ECGGKM++ E EY+KA   FF +F  Y E G PRR   LKYLVLA+ML  S I+PFDSQE KPYK++PE++AM  L+ A+Q +D+  FE ILK +R  + ED FIR HI+ LLR IRTQVL KL+ PY R+ +  ++ ELN I   EVE+LLVS ILD  V+G IDQ  Q+    RE  G
Sbjct:   35 YYNSKALKEDDP-KAALESFQKVLELEGKE---KGEWGFKALKQMIKINFRLGNYDEMMVRYKLLLTYIKS---------------------------------------------AVTRNYSEKSINSILDYISTSKQMELLQDFYETTLDALKEAK---------NERLWFKTNTKLGKLYYDRGDYP----------RLQRILKQLHQSCQT-----------DDGADDLKKGTQLLEIYALEIQMYTAQKNNKKLKALYEQSLHIKSAIPHPLIMGVIRECGGKMHLREGEYEKAHTDFFEAFKNYDESGSPRRTTCLKYLVLANMLMKSGINPFDSQETKPYKNDPEILAMTNLVSAYQNNDINDFEKILKTNRQNIMEDPFIREHIEDLLRNIRTQVLIKLIKPYTRIHIPFISRELN-IDALEVENLLVSCILDSSVNGRIDQVNQVLELDRESRG 417          
BLAST of NO21G02350 vs. NCBI_GenBank
Match: ETN67092.1 (cop9 signalosome complex subunit [Anopheles darlingi])

HSP 1 Score: 308.1 bits (788), Expect = 5.200e-80
Identity = 184/465 (39.57%), Postives = 263/465 (56.56%), Query Frame = 0
Query:   33 YYAAKGLKSQGKLDEALRGMQRMVALEMEREGGRGEWGFKALKQSVKMLFTLGRHEEMLRCYVFLLDNYASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQNVAEKGITSIIDHVSSSLDPSLLHSLYEITLARLNGGRXXXXXXXXXXXXLWFKTHLKLGHLLLEEAKHADGEESNRLLGRLQRAIKELIKSCEAGRKEQDAQEEGNGGVDTIKGGTQLLDVYALQMQVYSLQKDSRKLKDLYKLALRITWGVPHPLTLAVLQECGGKMYMDEKEYDKAIHSFFASFNYYAEVGDPRRLLVLKYLVLASMLHASTIDPFDSQEVKPYKDEPEVVAMRTLILAFQQDDVKTFETILKEHRHALTEDAFIRTHIDQLLRTIRTQVLTKLLIPYKRVSLSHVAHELNDIPQDEVESLLVSLILDGKVSGYIDQTQQMWVRGREGEGGK 498
            YY +K LK +    EAL+  Q+++ LE    G +GEWGFKALKQ +K+ F L  ++EM+  Y  LL    S                                                +N +EK I SI+D++S+S +  LL + YE TL  L   +            LWFKT+ KLG L  +              G+LQR +K+L +SC+            + G D +K GTQLL++YAL++Q+Y++QK+++KLK LY+ +L I   +PHPL + V++ECGGKM++ E E++KA   FF +F  Y E G  RR   LKYLVLA+ML  S I+PFDSQE KPYK++PE++AM  L+ A+Q +D+  FE+IL+ +R+ +  D FIR HI+ LLR IRTQVL KL+ PY ++++  +++ELN I   EVESLLVS ILD  + G IDQ  Q+    +E   G+
Sbjct:   37 YYNSKSLKEEAP-QEALKSFQKVLDLE---NGEKGEWGFKALKQMIKLNFKLQNYQEMMSRYKQLLTYIKS---------------------------------------------AVTRNHSEKSINSILDYISTSKNMELLQNFYETTLEALKDAK---------NDRLWFKTNTKLGKLYFDRND----------FGKLQRILKQLHQSCQT-----------DDGEDDLKKGTQLLEIYALEIQMYTVQKNNKKLKALYEQSLHIKSAIPHPLIMGVIRECGGKMHLREGEFEKAHTDFFEAFKNYDESGSSRRTTCLKYLVLANMLMKSGINPFDSQEAKPYKNDPEILAMTNLVTAYQNNDIMEFESILRNNRNNIMADQFIREHIEDLLRNIRTQVLIKLIRPYTKITIPFISNELN-IEPAEVESLLVSCILDNTIQGRIDQVNQVLELNKEARSGE 421          
BLAST of NO21G02350 vs. NCBI_GenBank
Match: XP_002127965.1 (PREDICTED: COP9 signalosome complex subunit 2-like [Ciona intestinalis])

HSP 1 Score: 307.8 bits (787), Expect = 6.800e-80
Identity = 190/456 (41.67%), Postives = 260/456 (57.02%), Query Frame = 0
Query:   33 YYAAKGLKSQGKLDEALRGMQRMVALEMEREGGRGEWGFKALKQSVKMLFTLGRHEEMLRCYVFLLDNYASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQNVAEKGITSIIDHVSSSLDPSLLHSLYEITLARLNGGRXXXXXXXXXXXXLWFKTHLKLGHLLLEEAKHADGEESNRLLGRLQRAIKELIKSCEAGRKEQDAQEEGNGGVDTIKGGTQLLDVYALQMQVYSLQKDSRKLKDLYKLALRITWGVPHPLTLAVLQECGGKMYMDEKEYDKAIHSFFASFNYYAEVGDPRRLLVLKYLVLASMLHASTIDPFDSQEVKPYKDEPEVVAMRTLILAFQQDDVKTFETILKEHRHALTEDAFIRTHIDQLLRTIRTQVLTKLLIPYKRVSLSHVAHELNDIPQDEVESLLVSLILDGKVSGYIDQTQQMWV 489
            YY +K LK +     AL   QR++ LE +    +GEWGFKALKQ  K+ F LGR+EEM+  Y  LL    S                                                +N +EK I SI+D++S+S    LL   YE TL  L   +            LWFKT+ KLG L      + D +E N    +L + +K+L +SC      QD       G D +K GTQLL+VYAL++Q+Y+ QK+++KLK +Y+ +L I   +PHP T+ V++ECGGKM++ E EYDKA   FF +F  Y E G PRR   LKYLVLA+ML  S I+PFDSQE KPYK++P+++AM  L+ A+Q +D+  FE+I+  +R ++ +D FIR HI+ LLR +RTQVL KL+ PY R+ +  ++ ELN I  DEVESLLVS ILDG + G IDQ +Q+ V
Sbjct:   37 YYNSKALK-EDDAALALESFQRVLDLEEQ----KGEWGFKALKQMSKINFKLGRYEEMMSRYKQLLTYIKS---------------------------------------------AVTRNYSEKSINSILDYISTSKQMDLLQHFYETTLEALKDAK---------NDRLWFKTNTKLGKL------YFDRDEYN----KLAKILKQLHQSCTT----QD-------GGDDMKKGTQLLEVYALEIQMYTAQKNNKKLKHVYEQSLHIKSAIPHPFTMGVIRECGGKMHLREGEYDKAHTDFFEAFKNYDESGSPRRTTCLKYLVLANMLMKSGINPFDSQEAKPYKNDPDILAMTNLVSAYQNNDIAAFESIVAANRASIMQDPFIREHIEDLLRNVRTQVLCKLIRPYTRIRIPFISKELN-IDTDEVESLLVSCILDGTIQGRIDQVEQVLV 411          
The following BLAST results are available for this feature:
BLAST of NO21G02350 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM29476.11.800e-13356.39cop9 signalosome complex subunit 2 [Nannochloropsi... [more]
EWM29477.13.900e-10453.40cop9 signalosome complex subunit 2 [Nannochloropsi... [more]
XP_005852701.12.800e-10250.32cop9 signalosome complex subunit 2 [Nannochloropsi... [more]
CBN77279.11.300e-8642.41conserved unknown protein [Ectocarpus siliculosus][more]
XP_020916005.12.700e-8140.09COP9 signalosome complex subunit 2 [Exaiptasia pal... [more]
XP_023337931.11.000e-8041.68COP9 signalosome complex subunit 2-like [Eurytemor... [more]
XP_019615934.11.400e-8041.04PREDICTED: COP9 signalosome complex subunit 2 [Bra... [more]
XP_005089070.11.800e-8040.82PREDICTED: COP9 signalosome complex subunit 2 isof... [more]
ETN67092.15.200e-8039.57cop9 signalosome complex subunit [Anopheles darlin... [more]
XP_002127965.16.800e-8041.67PREDICTED: COP9 signalosome complex subunit 2-like... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL031nonsL031Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR092ngnoR092Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO21G02350.1NO21G02350.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO21G02350.1NO21G02350.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO21G02350 ID=NO21G02350|Name=NO21G02350|organism=Nannochloropsis oceanica|type=gene|length=4469bp
ACGACAGGTCCAAAAAAGAGCCGTGCCATGAAAGGGTGAAGACACACAGG
GGCGGCAGGCACGGCAGATCAATCGAATACCAAGTACAGGAAGGGAAAAA
AGCCGGCATACGCGCGACGACTCGGCGCTCTCCCTCAGGCCCACGATCCT
GCAGACCAGTTCAGCAGCAAGCAGGCACAACATGGAAGAAGAAGAAACAG
AAGAGAAGGAGGAGGAGTACGATTTTGAGTACAGTGACGATGAAGAGCAG
GAGCCGGACGTGGAGTTGGAAAATGAATACTACGCAGgtagggagggagg
gagggcgggcggaaggtggacgaaaaattataatacagcgacgtttttgt
ggcgcttgagaatacaaacaaggaggatatggagggagagaggtgggaag
gaaggacggaaggaaggcaggaaggacggaaggacggcaggaaggaagga
aggaagggagagagggagagaggggcagttcgtgaattgctaattatgta
atgcaagcccaatgcctccgcaggcatcctaatcacgcggaagatcatgc
tcctctattgactcccttccctctttcccgcctccccggtacctcagCCA
AAGGTCTCAAATCCCAAGGGAAGTTGGACGAGGCGTTACGAGGCATGCAA
CGAATGGTAGCTCTGGAGATGGAGAGGGAGGGAGGGAGAGGGGAGTGGGG
GTTTAAGGCACTCAAGCAAAGTGTCAAGATGTTGTTCACCCTAGGCAGAC
ACGAGgtagggagggaaagagggggagagggtgggagaaagggagaaagg
gatggagggatggagggatggagggagggtgaacatgaagaggccgaggc
acccaccgtccctcccgcctccctcacacattccctccctacctccctcc
cattcaaaacaacagGAGATGCTCAGGTGCTACGTCTTCCTTCTCGATAA
CTATGCTTCCTCGTCTCCCTCCCCCTCCTCCTCCTCTATCCCCTCCTCGA
TCTCCTTTTCTTCTTTCTTCCCTTCATCCTCCTCGTCCTCCTTCCCTCCT
TCCCTCCCACCCGCCACCTGTGGCGGTGGCGGCGGCAGTTCGGCTGCGGT
CACCCAAgtaggttgtctgggccctccctccctccctccctcccttcctt
cctccctcctttcctacctcccttccttgttctcacgcctccctccctcc
ctccctccctccctccctccctccctccctcccttcctccctcccttcct
ccctcctttcctacctcccttccttgttctcacgcctccctccctccctc
cctccctccctccctccctccctccctccttccctccctccgtcctttcc
tacctcccttccttgttctcacgcctccctccctccctccctctctccct
cctcccagAATGTGGCAGAGAAGGGCATAACCTCCATCATCGACCATGTT
TCGTCCTCCCTCGATCCCTCTCTCCTTCACTCCCTCTATGAAATCACACT
GGCCCGCCTCAATGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGAGGA
ACGAGCGGTTGTGGTTCAAGACCCACTTGAAGCTGGGCCATCTCTTGCTC
GAGGAGGCGAAGCACGCGGATGGAGgtgagtcttcccctccctccctcct
tccctccctccctccctccccttttcttctcgtcccatccttccctttgc
tcatgctccctccctccctccctccctcgctccctccctccctccctccc
tccctcagAAGAAAGCAATCGCCTCCTTGGCCGCCTCCAGCGAGCAATCA
AAGAACTTATCAAGAGCTGTGAAGCGGGGCGGAAAGAGCAAGATGCACAG
gtaccctccctccctccctccctccctccctccctccctccctccctccc
tccgcccctcgctcgaaaagagagccacacgccaacaaacgccccaccca
tccattcctcccccctccctccccccctccctccctccccccctcccttc
ctccctctcagGAGGAGGGCAATGGTGGGGTGGATACCATCAAGGGAGGG
ACGCAGCTCCTTGATGTCTACGCCCTCCAGATGCAGGTCTACTCCCTCCA
AAAAGACTCGAGAAAACTCAAGgcaagccccccctccctccttccctccc
cccttccctcccccctccctccctccctccctccctcaccctctccctcc
ctccctcccttccccttctagtcttgtgggtgtctcgcgtgcacccgctg
ctttttccattcctctgcgccctcccccctccctcctctccacgcacaaa
accctcccccctccccttcctccctccctccctcccacagGACCTGTATA
AGCTCGCCCTCCGCATCACCTGGGGCGTCCCTCATCCCCTCACTCTTGCC
GTGCTGCAAGAGTGCGGCGGCAAGATGTATATGGACGAAAAAGgtaccgc
cctccctccctccctccctccctccctccctccctatccttctccctccc
tccctccctccctccctccctccctcctccctagAATACGACAAGGCCAT
CCACTCCTTTTTCGCCTCCTTCAACTACTACGCCGAAGTCGGTGACCCTC
GGCGTCTCCTTGTCCTCAAATATCTCGTTCTTGCCTCCATGCTTCACGCC
TCAACCATTGATCCCTTCGATAGTCAGgcacgtccccctccctccctccc
tccctccttccctttgtctacaaagacgagcccgaggtggtggccaagct
gaacctcatccctccctccctccctccctccctccctccctccctccctc
agGAGGTCAAGCCCTACAAAGACGAGCCCGAGGTGGTGGCCATGCGGACC
CTCATCCTCGCCTTCCAACAAGACGACGTAAAGACCTTTGAAACCATCCT
CAAGgtgtgctgtcgctccctcgctccctcgctatctgcctccctccctc
cctccctccctccctccctccctccttccctccccatcactccaggagca
ccgtcacgccctgactgaagatactcttacccgcccccccttcaataagt
caccccctccctccctccctccctccctccctccctccctccctccctcc
ttccctccccatcactccagGAGCACCGTCACGCCCTGACTGAAGACGCC
TTTATCCGGACCCATATCGACCAGCTCCTCCGCACCATCCGCACACAGgc
acgggccggtcctccttccctccctctctccctccctccctccctccctc
cctcccatccaaactcaatctcctcccccctcccccttagctgtctacac
cctccctccttcctacctcccggcttctctccctttcttccctctcggcg
ctgacaagcgccctccctccctctctccccccctctctccctccctccct
ccctccctccctccctcagGTCCTGACGAAGCTCCTCATTCCCTACAAGC
GCGTGTCCCTCTCTCACGTGGCGCACGAATTAAACGACATTCCACAGGAC
GAGGTGGAAAGCCTCTTGGTCTCGCTCATTCTTGATGGAAAGgtacctct
ttccctccctctttccttccctctttccctccctccctccctccttccct
ctttcttttcttttcctgaatgcttcctctttttcccctcctccctcttt
ccctccctccctccctccctccctccttccctctttcacttcttttcctg
aatgcttcctctgtttcccctcattcctctttccctccctccctccctcc
ctcccccctctgtctctcaccctccctccttgccttgtctttcggcagct
ggccttcaagcacatccccttccctccctcccttcctcccttcctccctt
ctcagGTTTCGGGTTACATCGATCAGACCCAGCAGATGTGGGTGAGGGGA
AGAGAAGGGGAGGGAGGGAAGTACTTCGTGGGAGGGGGGGGGAAGAGGAG
GGGGAGGAAGGGAAAGAGGGAGGAATGGAGGGAGGGAGGGGAAGGGGGAG
GGATGGGAGGAGGAAGGAGTTTTATGCTGTAGGGAGGTGGAGTGAGGCGT
TGGGAAGAGTGGCTCGGGGAGAGAGGACGAGAAGGGAAGGGAAGAGGTGA
GGTATAGAGAAGGAGGGAGGTAGAAAGGGCTGTTGGGGTGCGGAAGGAAT
TGCTTGGTAGAGATAGAGGAGGGAGGAGGAGGAGGGAGGAGGAGGAGGGA
GGAGGGGGAAGGAGGGAAAGGGGGGAAATAGGGAGGGCGGGAGGGGCTTG
GAAAGGCGAGGAAGAGGAAGGAAGGGAGAGGCAGGGAGGGAAGGAAGGAG
GAAAGGAGGGAGGGGGAGATTTTACGCTGTGTGATTGTACAAAGAGCGAG
ACAGAAAGGTTTGTCAAGGACAAGGACAACGACCGCATAGCCCCCCACCA
TTAAAAACAAGGGTGTGTGTGTAATGTATATAAAATCCTAGCAACAGACA
GATATTAACTCACCTGGCT
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protein sequence of NO21G02350.1

>NO21G02350.1-protein ID=NO21G02350.1-protein|Name=NO21G02350.1|organism=Nannochloropsis oceanica|type=polypeptide|length=534bp
MEEEETEEKEEEYDFEYSDDEEQEPDVELENEYYAAKGLKSQGKLDEALR
GMQRMVALEMEREGGRGEWGFKALKQSVKMLFTLGRHEEMLRCYVFLLDN
YASSSPSPSSSSIPSSISFSSFFPSSSSSSFPPSLPPATCGGGGGSSAAV
TQNVAEKGITSIIDHVSSSLDPSLLHSLYEITLARLNGGREGGREGGRRN
ERLWFKTHLKLGHLLLEEAKHADGEESNRLLGRLQRAIKELIKSCEAGRK
EQDAQEEGNGGVDTIKGGTQLLDVYALQMQVYSLQKDSRKLKDLYKLALR
ITWGVPHPLTLAVLQECGGKMYMDEKEYDKAIHSFFASFNYYAEVGDPRR
LLVLKYLVLASMLHASTIDPFDSQEVKPYKDEPEVVAMRTLILAFQQDDV
KTFETILKEHRHALTEDAFIRTHIDQLLRTIRTQVLTKLLIPYKRVSLSH
VAHELNDIPQDEVESLLVSLILDGKVSGYIDQTQQMWVRGREGEGGKYFV
GGGGKRRGRKGKREEWREGGEGGGMGGGRSFML*
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Synonyms
Publications