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Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
chr21 | genome | chr21:194777..198087 + |
Analyses
This mRNA is derived from or has results from the following analyses
Homology
The following BLAST results are available for this feature:
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >NO21G00560.1 ID=NO21G00560.1|Name=NO21G00560.1|organism=Nannochloropsis oceanica|type=mRNA|length=3224bp ACAGCACAAGCTGGCAATCTATCCCCATGCAAGACGCTGAGGAGGAGGGC TCAGACGAGTGTATGGTTGTGCCCGGAGTGTATCGCCAAATTCAAAAGCA GCAGCATCAGCAGCAGCGCATGCCCCCCGTGCCTCCTCTCCCCAGTTATG TAGGTGATGAAGGGGAGATAAACGACAAAGGAAGATCAAGACAGCAGGAG CCTTTGTTCAAGACGGCACAGCTCATTATCGAGGAATATGAAGACGAAGA AGAGCGAGAGAACGACAAGGAACAGGAGGATGAAAGGCGCGGTCCCAATG CCGGCGGCAATGATGGCAACGGCAAGGGCATCGGGGCAAAGGAGAAAGCA GTTGCGGTAACAGGGGGTGGACATACCCTTTGTAACGCCAGAATCAGTAG CAACAGCAGCAGCAGCAGCATGTGGAGACAGGAGCTGCAGGAGCAGCAGG AGCAGCAGGAGCAGGAGCAGCAGCAGCAGCAGCAAGTTCCCACAAGAGGG GGGATAGAGGCCTTAAAGTCATCGTCCTCATTGAAGCAGGACGAGCAGGT GGTGGAGCATTTCAATAGTTTGTCGGCTTCTGCTGCTGACGCTTACCTAG GGTTGTCTGGCAGCCATGGAGAGGAGGAAGGAGGAGCAAGGAGAAGGGAG GAAGGAAAAGAGGGACGAAAAGTCGAAGGTGGAGAGGTGCGAGGCGTCGA CGTGGCTGGTGAGTTCGGGATAGAGGAGGCGGGGGAAGAGGAGGAGGAGG AGAAGGAAGAAGAGGAGGGGAAGGAGGAGGAGGAACAAATCAAGTTGGAA ATGCATGGGACGGCCCGCACAGTCTCGGTGACCGAGGGAGTATCGTGCGA GGCCGGAGCCTTAAAGGAGGCTGTCATTGCGCCAGCCATCCACCTCCAGG AAGAGTTCGAGGATGAGGAAGGGAGGGAAGGCAACACTCCCTCCTCCTTC TCTGACCCTCCTTTTCGACATCGACGACGACGGAGTCAACATATCTCTCT TACCAGTCCTCCCTACAATCCATACGCCGCTGCTGTTCCTCCACCATTTC CTACCTCCAGCGGCGCCTCTACTTTTCCTCCTCCTCCTCCTTCTTCTTCT TCTGCTTCTTACATAAGCTTAAGCCAGCAGCAGCCCCCTCATCCTCGCCC TCTCGCATCCCCCTCCCTCAACACGACAACAACGTCTGTGCCCATCCCAG AGATGGAGCAGCTGACCCTCGCCCACACGCCGCAGCAGCAGCGGGAGCAG CAGCATCGGTGTCAGTGTCAAGGCCAAGAGCACAGGGATCGAATGTGGAG GGAGGACGATCTGGAACTGCAGAGCGAATCGCTATATGTGGGGATTGAAG TGCCCGTTCCGTCCCTCCTCTACGACCCTGGTGCTTACAACCGACAACCT GTATCACAGCTTGCCGCAGCAGCAGCGGCAGCAGCGGCAGCAGCGTCAAA AGGGAGGTGGAGGTCAAGAAAAGACTGGAGCGGGCGAAGGGAGGAGGGAG GGGAAGAGATGATGGGAGGGGAGGAAGAAGCTTATTTGATGTTACAGCTC AAGCAGGAGCAGCAGGAGTTACAGAGGCAGCAGCAGCACCAGCAACAGCA CCAACAGGGAGGGAGGGAGGGGTGGTTATGCCACCAACATCAAGCAGGAG CAGTTTTAAATCCTTTAAATCCTTCTTTTCTTCTTTACCCCCAATCCGCA GCTTCTCCTGCTTTTGCTGCTGTTGCTGCTGCTCCTGCTGCTGGCACTGC TGAGCATGGTCCGTCAAACGCCTTCCTTTTTCCTTCCTACCCCCCTCGGC CACAACAAACGCCACCCATCTCCCACGCAACATCAACAGCAGCAATAAAA ATAGGAAGGCCCCTCAACTTTTGCGTCCTTCCCCCCTCCCCCTCCTACTC CGTCTTGCACTCCCCCTCCTACTCCCTCTTGCCCTCCCCCCCGCCCTCCC CCCGTTTGGAAAATCTGCGAAGGGAGCTGGAGGCTCTGAAAGAAGATAAT GCTCGACATCGTCACCACTATGAAAACCAGCTTGCCCGGCTTCTGGAAAC CCAACAGCAGCAGCAGCGGGAGCAACAGCAGCAGCAGCAGCATCAGCAGC AGCAACATCAGCAGCAGCAGCAGCAGCAGCAACAACAACAGCAGCAGCAG CGGGAGCAACATCAGCAGCAGCAGGCGTGGGGACAAGAGCGGGAGAAGGA GAAGGAAAGGGAGAGGGAATGGCAGCAGAAGCAGCAGCAGCACCAGGAGC TTCCATCTTTTCCCCTCCCTCCCCATCACCTCTCTCCTCCACAAGCAGAA GGAGGGCCCGCGGTCCGACGGAAGGGAACTGCACTCCTCGCTGCTCGTGA TGCACACCATCAGCAGCAGCAGCAGCAGCAGCAGCAGCAACAACAACAAC AACAACAACAACAACAACGACAACAACAGCTACAACAACAACAACAACAA CAACAGCCACAACAACAACAACAACAACAACAACAACAACAACAACAAAC AACAACAACAACAACAACAACAACAACAACAAACAACAACAACAACAACA ACAACAACAAACAACAACAACAACAACAACAAACAACAACAACAACAACA ACAACAACAACAACAACAACAACAACAAACAACAACAACAACAACAACAA CAACAACAACAACAACAACAAACAACAACAACAACAACAACAACAACAAC AACAACAACAACAACAACAACAACAACAACAACAACAACAACAACAACAA CAACAACAACAACAACAACAACAACAACAACAACAACAACAACAACAACA ACAACAACAACAACAACAACAACAACAACACAACAACAACAACAACAACA ACAAACAACAACAACAACAACAACAACAACAACAACAACAACAAACAACA ACAACAACAACAACAACAACAACAACAACAACAACAACAACAACAACAAC AACAACAACAACAACAACAACAACAACAAACAACAACAACAACAACAACA ACAACAACAACAACAACAACAACAACAACAACAACAACAACAACAACAAC AACAACAACAGGCACTCCCCGAGCGCTTGCATGTGCAGCAGCAGAAGCAG CAGCAGCAGCTACGGCAACAGCAGCACCAGCACCACCAGCACCACCAGCA GCACCACCAGCAGCACCAGCACCAGCACCAGCACCAGCACCAGCACCAGC AGCAACAAGAGGGACAAGGGATAG back to topprotein sequence of NO21G00560.1 >NO21G00560.1-protein ID=NO21G00560.1-protein|Name=NO21G00560.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1066bp MQDAEEEGSDECMVVPGVYRQIQKQQHQQQRMPPVPPLPSYVGDEGEIND KGRSRQQEPLFKTAQLIIEEYEDEEERENDKEQEDERRGPNAGGNDGNGK GIGAKEKAVAVTGGGHTLCNARISSNSSSSSMWRQELQEQQEQQEQEQQQ QQQVPTRGGIEALKSSSSLKQDEQVVEHFNSLSASAADAYLGLSGSHGEE EGGARRREEGKEGRKVEGGEVRGVDVAGEFGIEEAGEEEEEEKEEEEGKE EEEQIKLEMHGTARTVSVTEGVSCEAGALKEAVIAPAIHLQEEFEDEEGR EGNTPSSFSDPPFRHRRRRSQHISLTSPPYNPYAAAVPPPFPTSSGASTF PPPPPSSSSASYISLSQQQPPHPRPLASPSLNTTTTSVPIPEMEQLTLAH TPQQQREQQHRCQCQGQEHRDRMWREDDLELQSESLYVGIEVPVPSLLYD PGAYNRQPVSQLAAAAAAAAAAASKGRWRSRKDWSGRREEGGEEMMGGEE EAYLMLQLKQEQQELQRQQQHQQQHQQGGREGWLCHQHQAGAVLNPLNPS FLLYPQSAASPAFAAVAAAPAAGTAEHGPSNAFLFPSYPPRPQQTPPISH ATSTAAIKIGRPLNFCVLPPSPSYSVLHSPSYSLLPSPPPSPRLENLRRE LEALKEDNARHRHHYENQLARLLETQQQQQREQQQQQQHQQQQHQQQQQQ QQQQQQQQREQHQQQQAWGQEREKEKEREREWQQKQQQHQELPSFPLPPH HLSPPQAEGGPAVRRKGTALLAARDAHHQQQQQQQQQQQQQQQQQQQRQQ QLQQQQQQQQPQQQQQQQQQQQQQTTTTTTTTTTTNNNNNNNNNKQQQQQ QQTTTTTTTTTTTTTTTNNNNNNNNNNNNNNKQQQQQQQQQQQQQQQQQQ QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQHNNNNNNNKQQQQQQQ QQQQQQTTTTTTTTTTTTTTTTTTTTTTTTTTTTNNNNNNNNNNNNNNNN NNNNNNNNNNNRHSPSACMCSSRSSSSSYGNSSTSTTSTTSSTTSSTSTS TSTSTSTSSNKRDKG* back to topmRNA from alignment at chr21:194777..198087+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >NO21G00560.1 ID=NO21G00560.1|Name=NO21G00560.1|organism=Nannochloropsis oceanica|type=mRNA|length=3311bp|location=Sequence derived from alignment at chr21:194777..198087+ (Nannochloropsis oceanica) ACAGCACAAGCTGGCAATCTATCCCCATGCAAGACGCTGAGGAGGAGGGC
TCAGACGAGTGTATGGTTGTGCCCGGAGTGTATCGCCAAATTCAAAAGCA
GCAGCATCAGCAGCAGCGCATGCCCCCCGTGCCTCCTCTCCCCAGTTATG
TAGGTGATGAAGGGGAGATAAACGACAAAGGAAGATCAAGACAGCAGGAG
CCTTTGTTCAAGACGGCACAGCTCATTATCGAGGAATATGAAGACGAAGA
AGAGCGAGAGAACGACAAGGAACAGGAGGATGAAAGGCGCGGTCCCAATG
CCGGCGGCAATGATGGCAACGGCAAGGGCATCGGGGCAAAGGAGAAAGCA
GTTGCGGTAACAGGGGGTGGACATACCCTTTGTAACGCCAGAATCAGTAG
CAACAGCAGCAGCAGCAGCATGTGGAGACAGGAGCTGCAGGAGCAGCAGG
AGCAGCAGGAGCAGGAGCAGCAGCAGCAGCAGCAAGTTCCCACAAGAGGG
GGGATAGAGGCCTTAAAGTCATCGTCCTCATTGAAGCAGGACGAGCAGGT
GGTGGAGCATTTCAATAGTTTGTCGGCTTCTGCTGCTGACGCTTACCTAG
GGTTGTCTGGCAGCCATGGAGAGGAGGAAGGAGGAGCAAGGAGAAGGGAG
GAAGGAAAAGAGGGACGAAAAGTCGAAGGTGGAGAGGTGCGAGGCGTCGA
CGTGGCTGGTGAGTTCGGGATAGAGGAGGCGGGGGAAGAGGAGGAGGAGG
AGAAGGAAGAAGAGGAGGGGAAGGAGGAGGAGGAACAAATCAAGTTGGAA
ATGCATGGGACGGCCCGCACAGTCTCGGTGACCGAGGGAGTATCGTGCGA
GGCCGGAGCCTTAAAGGAGGCTGTCATTGCGCCAGCCATCCACCTCCAGG
AAGAGTTCGAGGATGAGGAAGGGAGGGAAGGCAACACTCCCTCCTCCTTC
TCTGACCCTCCTTTTCGACATCGACGACGACGGAGTCAACATATCTCTCT
TACCAGTCCTCCCTACAATCCATACGCCGCTGCTGTTCCTCCACCATTTC
CTACCTCCAGCGGCGCCTCTACTTTTCCTCCTCCTCCTCCTTCTTCTTCT
TCTGCTTCTTACATAAGCTTAAGCCAGCAGCAGCCCCCTCATCCTCGCCC
TCTCGCATCCCCCTCCCTCAACACGACAACAACGTCTGTGCCCATCCCAG
AGATGGAGCAGCTGACCCTCGCCCACACGCCGCAGCAGCAGCGGGAGCAG
CAGCATCGGTGTCAGTGTCAAGGCCAAGAGCACAGGGATCGAATGTGGAG
GGAGGACGATCTGGAACTGCAGAGCGAATCGCTATATGTGGGGATTGAAG
TGCCCGTTCCGTCCCTCCTCTACGACCCTGGTGCTTACAACCGACAACCT
GTATCACAGCTTGCCGCAGCAGCAGCGGCAGCAGCGGCAGCAGCGTCAAA
AGGGAGGTGGAGGTCAAGAAAAGACTGGAGCGGGCGAAGGGAGGAGGGAG
GGGAAGAGATGATGGGAGGGGAGGAAGAAGCTTATTTGATGTTACAGCTC
AAGCAGGAGCAGCAGGAGTTACAGAGGCAGCAGCAGCACCAGCAACAGCA
CCAACAGGGAGGGAGGGAGGGGTGGTTATGCCACCAACATCAAGCAGGAG
CAGTTTTAAATCCTTTAAATCCTTCTTTTCTTCTTTACCCCCAATCCGCA
GCTTCTCCTGCTTTTGCTGCTGTTGCTGCTGCTCCTGCTGCTGGCACTGC
TGAGCATGGTCCGTCAAACGCCTTCCTTTTTCCTTCCTACCCCCCTCGGC
CACAACAAACGCCACCCATCTCCCACGCAACATCAACAGCAGCAATAAAA
ATAGGAAGGCCCCTCAACTTTTGCGTCCTTCCCCCCTCCCCCTCCTACTC
CGTCTTGCACTCCCCCTCCTACTCCCTCTTGCCCTCCCCCCCGCCCTCCC
CCCGTTTGGAAAATCTGCGAAGGGAGCTGGAGGCTCTGAAAGAAGATAAT
GCTCGACATCGTCACCACTATGAAAACCAGCTTGCCCGGCTTCTGGAAAC
CCAACAGCAGCAGCAGCGGGAGCAACAGCAGCAGCAGCAGCATCAGCAGC
AGCAACATCAGCAGCAGCAGCAGCAGCAGCAACAACAACAGCAGCAGCAG
CGGGAGCAACATCAGCAGCAGCAGGCGTGGGGACAAGAGCGGGAGAAGGA
GAAGGAAAGGGAGAGGGAATGGCAGCAGAAGCAGCAGCAGCACCAGGAGC
TTCCATCTTTTCCCCTCCCTCCCCATCACCTCTCTCCTCCACAAGCAGAA
GGAGGGCCCGCGGTCCGACGGAAGGGAACTGCACTCCTCGCTGCTCGTGA
TGCACACCATCAGCAGCAGCAGCAGCAGCAGCAGCAGCAACAACAACAAC
AACAACAACAACAACAACGACAACAACAGCTACAACAACAACAACAACAA
CAACAGCCACAACAACAACAACAACAACAACAACAACAACAACAACAAAC
AACAACAACAACAACAACAACAACAACAACAAACAACAACAACAACAACA
ACAACAACAAACAACAACAACAACAACAACAAACAACAACAACAACAACA
ACAACAACAACAACAACAACAACAACAAACAACAACAACAACAACAACAA
CAACAACAACAACAACAACAAACAACAACAACAACAACAACAACAACAAC
AACAACAACAACAACAACAACAACAACAACAACAACAACAACAACAACAA
CAACAACAACAACAACAACAACAACAACAACAACAACAACAACAACAACA
ACAACAACAACAACAACAACAACAACAACACAACAACAACAACAACAACA
ACAAACAACAACAACAACAACAACAACAACAACAACAACAACAAACAACA
ACAACAACAACAACAACAACAACAACAACAACAACAACAACAACAACAAC
AACAACAACAACAACAACAACAACAACAAACAACAACAACAACAACAACA
ACAACAACAACAACAACAACAACAACAACAACAACAACAACAACAACAAC
AACAACAACAGGCACTCCCCGAGCGCTTGCATGTGGTCGAAGCGGCGAAT
CTAGCTCAAACAGAAGAGAATCGGAGACTACGACAGGAACGAGAAGATTT
AGTCCGTTGTCTGGAAGAGCAGCAGCAGCAGAAGCAGCAGCAGCAGCTAC
GGCAACAGCAGCACCAGCACCACCAGCACCACCAGCAGCACCACCAGCAG
CACCAGCACCAGCACCAGCACCAGCACCAGCACCAGCAGCAACAAGAGGG
ACAAGGGATAG back to topCoding sequence (CDS) from alignment at chr21:194777..198087+ >NO21G00560.1 ID=NO21G00560.1|Name=NO21G00560.1|organism=Nannochloropsis oceanica|type=CDS|length=3198bp|location=Sequence derived from alignment at chr21:194777..198087+ (Nannochloropsis oceanica) ATGCAAGACGCTGAGGAGGAGGGCTCAGACGAGTGTATGGTTGTGCCCGG AGTGTATCGCCAAATTCAAAAGCAGCAGCATCAGCAGCAGCGCATGCCCC CCGTGCCTCCTCTCCCCAGTTATGTAGGTGATGAAGGGGAGATAAACGAC AAAGGAAGATCAAGACAGCAGGAGCCTTTGTTCAAGACGGCACAGCTCAT TATCGAGGAATATGAAGACGAAGAAGAGCGAGAGAACGACAAGGAACAGG AGGATGAAAGGCGCGGTCCCAATGCCGGCGGCAATGATGGCAACGGCAAG GGCATCGGGGCAAAGGAGAAAGCAGTTGCGGTAACAGGGGGTGGACATAC CCTTTGTAACGCCAGAATCAGTAGCAACAGCAGCAGCAGCAGCATGTGGA GACAGGAGCTGCAGGAGCAGCAGGAGCAGCAGGAGCAGGAGCAGCAGCAG CAGCAGCAAGTTCCCACAAGAGGGGGGATAGAGGCCTTAAAGTCATCGTC CTCATTGAAGCAGGACGAGCAGGTGGTGGAGCATTTCAATAGTTTGTCGG CTTCTGCTGCTGACGCTTACCTAGGGTTGTCTGGCAGCCATGGAGAGGAG GAAGGAGGAGCAAGGAGAAGGGAGGAAGGAAAAGAGGGACGAAAAGTCGA AGGTGGAGAGGTGCGAGGCGTCGACGTGGCTGGTGAGTTCGGGATAGAGG AGGCGGGGGAAGAGGAGGAGGAGGAGAAGGAAGAAGAGGAGGGGAAGGAG GAGGAGGAACAAATCAAGTTGGAAATGCATGGGACGGCCCGCACAGTCTC GGTGACCGAGGGAGTATCGTGCGAGGCCGGAGCCTTAAAGGAGGCTGTCA TTGCGCCAGCCATCCACCTCCAGGAAGAGTTCGAGGATGAGGAAGGGAGG GAAGGCAACACTCCCTCCTCCTTCTCTGACCCTCCTTTTCGACATCGACG ACGACGGAGTCAACATATCTCTCTTACCAGTCCTCCCTACAATCCATACG CCGCTGCTGTTCCTCCACCATTTCCTACCTCCAGCGGCGCCTCTACTTTT CCTCCTCCTCCTCCTTCTTCTTCTTCTGCTTCTTACATAAGCTTAAGCCA GCAGCAGCCCCCTCATCCTCGCCCTCTCGCATCCCCCTCCCTCAACACGA CAACAACGTCTGTGCCCATCCCAGAGATGGAGCAGCTGACCCTCGCCCAC ACGCCGCAGCAGCAGCGGGAGCAGCAGCATCGGTGTCAGTGTCAAGGCCA AGAGCACAGGGATCGAATGTGGAGGGAGGACGATCTGGAACTGCAGAGCG AATCGCTATATGTGGGGATTGAAGTGCCCGTTCCGTCCCTCCTCTACGAC CCTGGTGCTTACAACCGACAACCTGTATCACAGCTTGCCGCAGCAGCAGC GGCAGCAGCGGCAGCAGCGTCAAAAGGGAGGTGGAGGTCAAGAAAAGACT GGAGCGGGCGAAGGGAGGAGGGAGGGGAAGAGATGATGGGAGGGGAGGAA GAAGCTTATTTGATGTTACAGCTCAAGCAGGAGCAGCAGGAGTTACAGAG GCAGCAGCAGCACCAGCAACAGCACCAACAGGGAGGGAGGGAGGGGTGGT TATGCCACCAACATCAAGCAGGAGCAGTTTTAAATCCTTTAAATCCTTCT TTTCTTCTTTACCCCCAATCCGCAGCTTCTCCTGCTTTTGCTGCTGTTGC TGCTGCTCCTGCTGCTGGCACTGCTGAGCATGGTCCGTCAAACGCCTTCC TTTTTCCTTCCTACCCCCCTCGGCCACAACAAACGCCACCCATCTCCCAC GCAACATCAACAGCAGCAATAAAAATAGGAAGGCCCCTCAACTTTTGCGT CCTTCCCCCCTCCCCCTCCTACTCCGTCTTGCACTCCCCCTCCTACTCCC TCTTGCCCTCCCCCCCGCCCTCCCCCCGTTTGGAAAATCTGCGAAGGGAG CTGGAGGCTCTGAAAGAAGATAATGCTCGACATCGTCACCACTATGAAAA CCAGCTTGCCCGGCTTCTGGAAACCCAACAGCAGCAGCAGCGGGAGCAAC AGCAGCAGCAGCAGCATCAGCAGCAGCAACATCAGCAGCAGCAGCAGCAG CAGCAACAACAACAGCAGCAGCAGCGGGAGCAACATCAGCAGCAGCAGGC GTGGGGACAAGAGCGGGAGAAGGAGAAGGAAAGGGAGAGGGAATGGCAGC AGAAGCAGCAGCAGCACCAGGAGCTTCCATCTTTTCCCCTCCCTCCCCAT CACCTCTCTCCTCCACAAGCAGAAGGAGGGCCCGCGGTCCGACGGAAGGG AACTGCACTCCTCGCTGCTCGTGATGCACACCATCAGCAGCAGCAGCAGC AGCAGCAGCAGCAACAACAACAACAACAACAACAACAACAACGACAACAA CAGCTACAACAACAACAACAACAACAACAGCCACAACAACAACAACAACA ACAACAACAACAACAACAACAAACAACAACAACAACAACAACAACAACAA CAACAAACAACAACAACAACAACAACAACAACAAACAACAACAACAACAA CAACAAACAACAACAACAACAACAACAACAACAACAACAACAACAACAAC AAACAACAACAACAACAACAACAACAACAACAACAACAACAACAAACAAC AACAACAACAACAACAACAACAACAACAACAACAACAACAACAACAACAA CAACAACAACAACAACAACAACAACAACAACAACAACAACAACAACAACA ACAACAACAACAACAACAACAACAACAACAACAACAACAACAACAACAAC AACACAACAACAACAACAACAACAACAAACAACAACAACAACAACAACAA CAACAACAACAACAACAAACAACAACAACAACAACAACAACAACAACAAC AACAACAACAACAACAACAACAACAACAACAACAACAACAACAACAACAA CAAACAACAACAACAACAACAACAACAACAACAACAACAACAACAACAAC AACAACAACAACAACAACAACAACAACAACAACAGGCACTCCCCGAGCGC TTGCATGTGCAGCAGCAGAAGCAGCAGCAGCAGCTACGGCAACAGCAGCA CCAGCACCACCAGCACCACCAGCAGCACCACCAGCAGCACCAGCACCAGC ACCAGCACCAGCACCAGCACCAGCAGCAACAAGAGGGACAAGGGATAG back to top
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