NO21G00500, NO21G00500 (gene) Nannochloropsis oceanica

Overview
NameNO21G00500
Unique NameNO21G00500
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length6636
Alignment locationchr21:169696..176331 +

Link to JBrowse

Properties
Property NameValue
DescriptionEndonuclease/exonuclease/phosphatase
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr21genomechr21:169696..176331 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0046856phosphatidylinositol dephosphorylation
Vocabulary: INTERPRO
TermDefinition
IPR036691Endo/exonu/phosph_ase_sf
IPR000300IPPc
Vocabulary: Molecular Function
TermDefinition
GO:0004518nuclease activity
Homology
BLAST of NO21G00500 vs. NCBI_GenBank
Match: EWM22546.1 (Endonuclease/exonuclease/phosphatase [Nannochloropsis gaditana])

HSP 1 Score: 276.9 bits (707), Expect = 4.600e-70
Identity = 140/174 (80.46%), Postives = 148/174 (85.06%), Query Frame = 0
Query:  536 TYNCGSLPPSSLAXXXXXXXXXXXXXXXFFLSSWIPLNHDLYIIGVQELKGLQTLKTLLHAHLGGPSCYQMYGQEIGVVGGSSAFAERLGAIALLVYARTEDVKRGVFEMTAVPKAGGQQVLQGKNLLVCRAGNKGAVCLPFRYHQSTLVVAAAHLPADGSRRSKVEKRNANLR 710
            TYNCGSLPPS+L+                FL +WIPL+H LYIIGVQELKGLQ LK LLH HLGGP+ +QMYGQEI VVG  +A AERLGAIALLVYARTEDV+RGVFEMTAVPKAGGQQVLQGKNLLVCRAGNKGAVCLPFRYHQSTLVVAAAHLPADGSRRSKVEKRNANLR
Sbjct:  206 TYNCGSLPPSALSSSLPSPS---------FLHAWIPLHHHLYIIGVQELKGLQALKQLLHTHLGGPAAFQMYGQEISVVGNGTALAERLGAIALLVYARTEDVERGVFEMTAVPKAGGQQVLQGKNLLVCRAGNKGAVCLPFRYHQSTLVVAAAHLPADGSRRSKVEKRNANLR 370          
BLAST of NO21G00500 vs. NCBI_GenBank
Match: EWM26700.1 (type ii inositol- -trisphosphate 5-phosphatase [Nannochloropsis gaditana])

HSP 1 Score: 150.2 bits (378), Expect = 6.400e-32
Identity = 180/713 (25.25%), Postives = 261/713 (36.61%), Query Frame = 0
Query:  532 IFVSTYNCGSLPPSSLAXXXXXXXXXXXXXXXFFLSSWIPLNHDLYIIGVQELKGLQTLKTLLHAHLGGPSCYQMYGQEIGVVGGSSAFAERLGAIALLVYARTEDVKRGVFEMTAVPKAGGQQVLQGKNLLVCRAGNKGAVCLPFRYHQSTLVVAAAHLPADGSRRSKVEKRNANLRCVFRDADVAGE--LFDVHLQYQHTIFLGDLNYRMLGT-PEEVLVDIADAATKAKHDTQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXER----------------------GKKGSTDIPLVADAARTDEVS-------------------------SPSSFASSPSSSCPPSIXXXXXXXXXPPAGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIAEGTD---PSLPPCPHWLAARYRGL-EAGAVPQ---APNRRWN---ALVEAR------------DELRKAQGMGCVLHGFIEHPISFPPSYRRVRGEKGNAGDYTDVHRLRKAYSTY-------LDANGKTVEVLPP--REGGGEEEGEDREEEGPTATPVLSRRG-SGDSTPVTEGAKDGA--KEGEGGKASWAWEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCKVRVPSYTDRIWIHSLPGLGRALSFQAYELCDALLQSDHRPVSAVLTLDLRPAL 1161
            +F+STYN G     +L                  L++WIP + D+Y++G+QE    + L   + AHLGGP  Y MY + IG    S  +    G IALLV ARTE+V+   F    + ++    V +GKNL V  A NKG V L FRY+ +T  + A HL +D   RS+++KRN +   +  + ++  E  L DVH Q+   IFLGD+NYR+  T PE+VL D+A +  + + D                                      E+                      G +G    P + +    DE +                         S +  A         S             G                                            AEG D       P P     R  G  E G +      P++R N   + + AR            DE+R+    G + +GF E  I FPPSYRR++G  G  GDY DV  L+ AYST        L    + + +L P  R    + +G+  EE+  + TP  +  G    ST     + +G+  + GE G+                                                      R+PSYTDRI +H +      +    YE+CDAL  SDHRPVS ++T  +  A+
Sbjct:  343 LFISTYNLGECKSKALGPEA--------------LAAWIPRDRDVYVLGLQECMVYRRLGEDVLAHLGGPEKYVMYRRAIGSTYQSLGYH---GLIALLVLARTEEVQANRF---LLHESKNSAVARGKNLGVTTAQNKGGVGLAFRYYDTTFALLACHLSSDLKGRSRLDKRNQDAWQLTYETNLWREEYLLDVHHQHHVCIFLGDVNYRLRRTDPEKVLEDVA-SICRRERDVLCGGQEEWRRDRYALLLAPGNGGPGPGEGTPLEGGRKEKDDGVRDSEPCGGVDEPGVLESGGDEGEQQEPELLEEDPVDEEAEEVCCEQERQGVSSLVRQVKEYLEPSNTEMAKLTMKRLASSYLSEEGPMEVAARGLDESGDPGRREARRRTWSARLWSSIREHLWIRPQSSLESAVRHKAEGPDLEEGRRDPGPASGTRRLPGASEMGGLQHPLPPPDQRTNLSFSRLRARSHASSWEQLLRDDEMRQGMEKGAIFYGFQEGKIRFPPSYRRIKGPHGECGDYCDVETLKTAYSTVVKEKTLSLKKLNRGLRILAPYYRFLQRDSQGQALEEQSSSRTPSYASSGWESSSTRAFSRSYNGSGMENGEDGR------------------------------DGEDVSASSRAPAGAKKVQRHATTRIPSYTDRILLHVVEDFKDRIRLGPYEMCDALQGSDHRPVSTLVTARVNVAV 1004          
BLAST of NO21G00500 vs. NCBI_GenBank
Match: EWM28392.1 (type i inositol polyphosphate, partial [Nannochloropsis gaditana])

HSP 1 Score: 142.9 bits (359), Expect = 1.000e-29
Identity = 80/197 (40.61%), Postives = 110/197 (55.84%), Query Frame = 0
Query:  566 LSSWIPLNHDLYIIGVQELKGLQTLKTLLHAHLGGPSCYQMYGQEIGVVGGSSAFAERLGAIALLVYARTEDVKRGVFEMTAVPKAGGQQVLQGKNLLVCRAGNKGAVCLPFRYHQSTLVVAAAHLPADGSRRSKVEKRNANLRCVFRDADVAG--ELFDVHLQYQHTIFLGDLNYRMLGTPEEVLVDIADAATKAK 761
            L  W+P  +D+Y IGVQE   L  L+  LH HLGGPS Y M+  ++G      A     G IAL  +AR  DV+RG F   +   A   +V  G NL+V +  NKG V L FRYH STL    AH  +D   ++++++RN +   + R  ++    E FD HL++ HT  +GDLNYRM      ++  IA AAT+AK
Sbjct:  389 LEEWLPPGYDVYCIGVQECIILDDLRQALHEHLGGPSEYTMFQADVG------AATMLYGTIALTAFARASDVQRGAF---SAIDALTSRVKNGVNLVVTKTANKGMVGLAFRYHDSTLAFVTAHFASDSGGKTRLKRRNGDAYVLLRALNLTDTEEGFDFHLEHHHTFVMGDLNYRMKTDAASMITRIAAAATRAK 576          
BLAST of NO21G00500 vs. NCBI_GenBank
Match: EWM29391.1 (phosphatidylinositol- -trisphosphate 5-phosphatase 2 [Nannochloropsis gaditana])

HSP 1 Score: 132.1 bits (331), Expect = 1.800e-26
Identity = 83/224 (37.05%), Postives = 112/224 (50.00%), Query Frame = 0
Query:  532 IFVSTYNCGSLPPSSLAXXXXXXXXXXXXXXXFFLSSWIPL-NHDLYIIGVQELKGLQTLKTLLHAHLGGPSCYQMYGQEIGVVGGSSAFAERLGAIALLVYARTEDVKRGVFEMTAVPKAGGQQVLQGKNLLVCRAGNKGAVCLPFRYHQSTLVVAAAHLPADGSRRSKVEKRNANLRCVFRDADVA-GELFDVHLQYQHTIFLGDLNYRMLGTPEEVLVDIA 754
            +FV+T+N G  P  +LA                 L  WIP   +D+Y+IG+QE   ++  +  LH HLGGP  + M+  E+G            G IAL V AR  DV  G F   A   A   +V  G NL+V +AGNKG   L FRYH +TL     H  +D   + ++ +R  N R   R+  +   E FDVHLQ+ HT  LGDLN+RM     EV+  +A
Sbjct:  359 VFVTTFNMG--PVRNLAALGGR------------LEEWIPARGYDVYVIGLQECHCVEEFRAALHQHLGGPGMFHMFNAEVGPA------TVLYGNIALTVLARASDVASGAF---AAVGAEVSRVRNGVNLVVTKAGNKGMTGLSFRYHDATLAFITCHFASDSGGKKRLLERLENARQTLREVKLTDDEGFDVHLQHHHTFILGDLNFRMRLRAREVVEHVA 559          
BLAST of NO21G00500 vs. NCBI_GenBank
Match: XP_005854386.1 (type i inositol polyphosphate 5, partial [Nannochloropsis gaditana CCMP526] >EKU21974.1 type i inositol polyphosphate 5, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 131.3 bits (329), Expect = 3.100e-26
Identity = 83/238 (34.87%), Postives = 122/238 (51.26%), Query Frame = 0
Query:  532 IFVSTYNCGSLPPSSLAXXXXXXXXXXXXXXXFFLSSWIPLNHDLYIIGVQELKGLQTLKTLLHAHLGGPSCYQMYGQEIGVVGGSSAFAERL--GAIALLVYARTEDVKRGVFEMTAVPKAGGQQVLQGKNL-LVCRAGNKGAVCLPFRYHQSTLVVAAAHLPADGSRRSKVEKRNANLRCVFRDADVA--GELFDVHLQYQHTIFLGDLNYRMLGTPEEVLVDIADAATKAKHDTQ 765
            +FVSTYN G +                       L +WIPL++DLY+IGVQE   ++  +  +H HLGGP  Y M G+EIG         +R+  G IAL ++ART+DV  G      V +    +V  G +   + RA NKG V L  R H ++L +  AH  +D   R+++ KRN + R    D  +    + F +H Q+  T+ LGDLNYR  G PEE+L  +A +A + +   +
Sbjct:  185 MFVSTYNMGGITLKDAIDNDGLAA---------VLPTWIPLDYDLYVIGVQECCIIREFRRAVHKHLGGPEAYVMVGKEIG--------DDRILHGFIALTIFARTQDVATGA---VYVQEGAVDRVASGVSFGPMGRAPNKGFVGLSMRVHDTSLALITAHFASDKKGRNRLGKRNQDARRTLSDMSLLWDSDDFSIHTQHHFTVVLGDLNYRNRGHPEEILEMVAHSARECQDSVE 402          
BLAST of NO21G00500 vs. NCBI_GenBank
Match: EWM22143.1 (endonuclease exonuclease phosphatase family protein [Nannochloropsis gaditana])

HSP 1 Score: 131.3 bits (329), Expect = 3.100e-26
Identity = 83/238 (34.87%), Postives = 122/238 (51.26%), Query Frame = 0
Query:  532 IFVSTYNCGSLPPSSLAXXXXXXXXXXXXXXXFFLSSWIPLNHDLYIIGVQELKGLQTLKTLLHAHLGGPSCYQMYGQEIGVVGGSSAFAERL--GAIALLVYARTEDVKRGVFEMTAVPKAGGQQVLQGKNL-LVCRAGNKGAVCLPFRYHQSTLVVAAAHLPADGSRRSKVEKRNANLRCVFRDADVA--GELFDVHLQYQHTIFLGDLNYRMLGTPEEVLVDIADAATKAKHDTQ 765
            +FVSTYN G +                       L +WIPL++DLY+IGVQE   ++  +  +H HLGGP  Y M G+EIG         +R+  G IAL ++ART+DV  G      V +    +V  G +   + RA NKG V L  R H ++L +  AH  +D   R+++ KRN + R    D  +    + F +H Q+  T+ LGDLNYR  G PEE+L  +A +A + +   +
Sbjct:  463 MFVSTYNMGGITLKDAIDNDGLAA---------VLPTWIPLDYDLYVIGVQECCIIREFRRAVHKHLGGPEAYVMVGKEIG--------DDRILHGFIALTIFARTQDVATGA---VYVQEGAVDRVASGVSFGPMGRAPNKGFVGLSMRVHDTSLALITAHFASDKKGRNRLGKRNQDARRTLSDMSLLWDSDDFSIHTQHHFTVVLGDLNYRNRGHPEEILEMVAHSARECQDSVE 680          
BLAST of NO21G00500 vs. NCBI_GenBank
Match: EWM27419.1 (type ii inositol- -trisphosphate 5-phosphatase [Nannochloropsis gaditana])

HSP 1 Score: 127.1 bits (318), Expect = 5.800e-25
Identity = 72/194 (37.11%), Postives = 110/194 (56.70%), Query Frame = 0
Query:  566 LSSWIPLNHDLYIIGVQELKGLQTLKTLLHAHLGGPSCYQMYGQEIGVVGGSSAFAERLGAIALLVYARTEDVKRGVFEMTAVPKAGGQQVLQGKNL-LVCRAGNKGAVCLPFRYHQSTLVVAAAHLPADGSRRSKVEKRNANLRCVFRDADVA--GELFDVHLQYQHTIFLGDLNYRMLGTPEEVLVDIADAA 757
            + +W+P  +DLYI+G QE+  L +L+  LH HLGGP+ Y+M+ +EIG     +      G IA+ ++ART D++RG      V ++    V  G +L ++ RA NKG V L  RYH  ++    AH  AD    S+V +RN +     R+  +    E FD HLQ+   I LGDLNYR+   P ++L  ++++A
Sbjct:  463 IPAWVPRGYDLYILGFQEVLILDSLRIALHDHLGGPAVYEMFCREIGDATILN------GMIAITIFARTVDIQRGA---VVVARSASGTVNTGMSLGIMGRAANKGTVGLSVRYHDLSIACITAHFAADKHGHSRVTRRNQDAVQTLRELSLTYDNEDFDAHLQHDVAILLGDLNYRLTAKPLDILRRVSESA 647          
BLAST of NO21G00500 vs. NCBI_GenBank
Match: EWM29605.1 (72 kda inositol polyphosphate 5-phosphatase [Nannochloropsis gaditana])

HSP 1 Score: 125.9 bits (315), Expect = 1.300e-24
Identity = 153/626 (24.44%), Postives = 219/626 (34.98%), Query Frame = 0
Query:  566 LSSWIPLNHDLYIIGVQELKGLQTLKTLLHAHLGGPSCYQMYGQEIGVVGGSSAFAERLGAIALLVYARTEDVKRGVFEMTAVPKAGGQQVLQGKNL-LVCRAGNKGAVCLPFRYHQSTLVVAAAHLPADGSRRSKVEKRNANLRCVFRDADVAGEL--FDVHLQYQHTIFLGDLNYRML-GTPEEVLVDIADAATKAKHDTQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXERGKKGSTDIPLVADAARTDEVSSPSSFASSP-----------SSSCPPSIXXXXXXXXXPPAGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIAEGTDP-------SLPPCPHWLAARYRGLEAGAVPQAPN-------------RRWNALVEARDELRKAQGMGCVLHGFIEHPISFPPSYRRVRGEKG--NAGDYTDVHRLRKAYSTYLDANGKTVEVLPPREGGGEEEGEDREEEGPTATPVLSRRGSGDSTPVTEGAKDGAKEGEGGKASWAWEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCKVRVPSYTDRIWIHSLPGLGRALSFQAYELCDALLQSDHRPVSAVLTL 1155
            L  W+P +  LY++GVQE + L+  +  +H+HLGGP  + M+G E+    G   F    G IA+ ++ R +DV  G F +    K    +V  G +L  +  A NKG V L  RY+  +L    AH  +D   R++V KRN + R   +   +  +   F+VH Q+ H I LGD NYR+   TP EV+  +A +A      +Q                                      G      IP +     T   S+ S   S P           S+S    +           +G                                             E ++P       +    P    +    L     P   N               WN  V   DEL ++     V + F E PI+FPPSYR  R   G   AGDYTDV +L  AYST++  + K +  L        E G        T +P+ +   S  S+   +G                                                                 +R PSYTDRI  HS+PG G  L ++ Y++ DA+  SDHRPV A  TL
Sbjct:  565 LPQWLPPSFSLYVLGVQECQCLRQFRADVHSHLGGPEAFVMFGDEL----GDDQFLH--GFIAITLFVRADDVATGAFHL---HKGAVNKVAAGVSLGALGHAPNKGMVGLSCRYYDVSLAFVTAHFASDSKGRNRVSKRNQHARTTLQALSLHNDSDDFEVHHQHHHQICLGDFNYRLSPATPTEVVQLVARSA----QISQEIVANEASESNANPTSENWRKLSYKHFFERPTGLTFSLG-----SIPELPPCLGTRYSSNSSQNVSQPSYGTSGLGLPNSTSSKSYLGGKLPHLFLARSGSNAAKDELNRPPEAHGIGAGFSNVLRRRPSMELDMSSPHSRFGRQESSNPVYGIGSITDGEGPQQQISGSPSLRKNVKPSIVNSSSTQSIEDLGVDMAWN-WVGCFDELSRSMRGRVVFYNFTEAPITFPPSYRWNRSIHGFDLAGDYTDVEQLMHAYSTFVADHPKLISRLTKSFVSHNERGNG------TVSPLSTLPRSLSSSTKRKGV---------------------------------------------------------------SLRTPSYTDRILTHSMPGKGANLRWRHYDMMDAVPLSDHRPVCAHFTL 1102          
BLAST of NO21G00500 vs. NCBI_GenBank
Match: XP_005856074.1 (phosphatidylinositol- -trisphosphate 5-phosphatase 1, partial [Nannochloropsis gaditana CCMP526] >EKU20284.1 phosphatidylinositol- -trisphosphate 5-phosphatase 1, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 123.6 bits (309), Expect = 6.400e-24
Identity = 80/211 (37.91%), Postives = 114/211 (54.03%), Query Frame = 0
Query:  532 IFVSTYNCGSLPPSSLAXXXXXXXXXXXXXXXFFLSSWIPLNHDLYIIGVQELKGLQTLKTLLHAHLGGPSCYQMYGQEIGVVGGSSAFAERLGAIALLVYARTEDVKRGVFEMTAVPKAGGQQVLQGKNLLVCRAGNKGAVCLPFRYHQSTLVVAAAHLPADGSRRSKVEKRNANLRCVFRDADVAGE--LFDVHLQYQHTIFLGDLNYR 741
            +F+STYN G     +L                  L++WIP + D+Y++G+QE    + L   + AHLGGP  Y MY + IG    S  +    G IALLV ARTE+V+   F    + ++    V +GKNL V  A NKG V L FRY+ +T  + A HL +D   RS+++KRN +   +  + ++  E  L DVH Q+   IFLGD+NYR
Sbjct:  161 LFISTYNLGECKSKALGPEA--------------LAAWIPRDRDVYVLGLQECMVYRRLGEDVLAHLGGPEKYVMYRRAIGSTYQSLGYH---GLIALLVLARTEEVQANRF---LLHESKNSAVARGKNLGVTTAQNKGGVGLAFRYYDTTFALLACHLSSDLKGRSRLDKRNQDAWQLTYETNLWREEYLLDVHHQHHVCIFLGDVNYR 351          
BLAST of NO21G00500 vs. NCBI_GenBank
Match: XP_009829170.1 (hypothetical protein H257_05867 [Aphanomyces astaci] >ETV81312.1 hypothetical protein H257_05867 [Aphanomyces astaci])

HSP 1 Score: 121.7 bits (304), Expect = 2.500e-23
Identity = 84/245 (34.29%), Postives = 123/245 (50.20%), Query Frame = 0
Query:  532 IFVSTYNC--GSLPPSSLAXXXXXXXXXXXXXXXFFLSSWIPLNHDLYIIGVQELKGLQTLKTLLHAHLG--GPSCYQMYGQEIGVVGGSSAFAERLGAIALLVYARTEDVKRGVFEMTAVPKAGGQQVLQGKNLL-VCRAGNKGAVCLPFRYHQSTLVVAAAHLPADGSRRSKVEKRNANLRCVFRDADVAG--ELFDVHLQYQHTIFLGDLNYRML---GTPEEVLVDIADA--ATKAKHDTQ 765
            IF ST+N   G++PP                     L  WIP  HD+Y+IGVQE   L+T++ ++ +HL       Y  YG+EI   G +       G IA+ VY   +DV  G F M         +V +GKNL+ + RA NKGAV   FRY   T  V   HL +D + +SK++KR+ +   +  +  +      FD HL   HTIF+GDLNYR+     TP+ +L  I D    ++ +H+++
Sbjct:  420 IFASTFNMAEGAVPPPEQ------------------LERWIPKGHDIYVIGVQECIDLRTMRHVMASHLQRINGKTYIEYGREI---GRTETLLGYHGFIAITVYVAADDVHAGHFHMHL---DATSKVNRGKNLIGLGRASNKGAVGFAFRYFNVTFAVLTCHLASDSTGKSKIKKRHHDGASILTNMHLQSIENEFDCHLMAHHTIFMGDLNYRLTALDATPDRILHMITDVINTSRRRHESK 640          
The following BLAST results are available for this feature:
BLAST of NO21G00500 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM22546.14.600e-7080.46Endonuclease/exonuclease/phosphatase [Nannochlorop... [more]
EWM26700.16.400e-3225.25type ii inositol- -trisphosphate 5-phosphatase [Na... [more]
EWM28392.11.000e-2940.61type i inositol polyphosphate, partial [Nannochlor... [more]
EWM29391.11.800e-2637.05phosphatidylinositol- -trisphosphate 5-phosphatase... [more]
XP_005854386.13.100e-2634.87type i inositol polyphosphate 5, partial [Nannochl... [more]
EWM22143.13.100e-2634.87endonuclease exonuclease phosphatase family protei... [more]
EWM27419.15.800e-2537.11type ii inositol- -trisphosphate 5-phosphatase [Na... [more]
EWM29605.11.300e-2424.4472 kda inositol polyphosphate 5-phosphatase [Nanno... [more]
XP_005856074.16.400e-2437.91phosphatidylinositol- -trisphosphate 5-phosphatase... [more]
XP_009829170.12.500e-2334.29hypothetical protein H257_05867 [Aphanomyces astac... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniR052ncniR052Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR062ngnoR062Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO21G00500.1NO21G00500.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|267913gene_9487Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_101704g1gene7895Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO21G00500.1NO21G00500.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO21G00500 ID=NO21G00500|Name=NO21G00500|organism=Nannochloropsis oceanica|type=gene|length=6636bp
ATGGGGAATGTGCCGCCATTCCCGATGTTGGCGCCCGCCACCATCGTGAC
GATGGTACAAGTGGAAGCAGGCATTTCAATCGTGGGGCTGACTATATCCC
TCATGGCCTTGGCGTACGACCACATCATgtaaggcgagagggaaaggagg
aaagggagggagggagcacacatgtcgatcctcctgagcacgccggtgcc
catcatctcaatcggctacccttccccccctcgttccctccctcagCGCC
AAGGAACCCGTCCGATTCCACGCGCACATGACCATCGTCCTCTTTATCTT
CGACCTCCTGGACGCCATACCCATGGTATTGTCTCGCACCACATTCGGGC
ATCCGTGGTTGTGCGACGCCCAGGGGATTGCCATCACTATCTTAGAGGTG
GCCATCGTCCTGTGGAACAGTTTTATGGCCTTGCAGgtaggttctcgcct
gccctccttccttccctcccctcctcgatccttgtcatctacccctttct
tcctccctccctcagGTGTACCGCTGGATCCTGCTCAAGCAAGACACCAC
CTCCCTCCGCCGACAGCTCCAGCCCGCTATCATCTTCATCGTCAGCTACT
CCCTTATCAACACCATCTTCTGGCGCCTGGCCGTGGCCCCCATGGACGGA
AACGCGGACCTCTGGTGCTGGATCCCTAAATACATGCCGTGGTCGCGCTT
TGGCTCTGTCTACGTCTACGTCTACCCCTCCATGCTCTGGGTCAGCTGGG
TTTTCATTCAGgtaagcaagccctccctccctccctctctccctctctcc
ctccctccctggcagggatggcaaggccgacgtgtagtactggagttccc
cacttgcttttagccaccctgcccttaccctcccttccctgcccccctcc
ctccccttctccctcccgtcctcgctcagGTGTATCGTCGCGTGGTCATC
ACCCCTCGCAAAGGATCTTCGGCCTCGGTCAAACAAGCCGCCGCCCGTCT
CCGTGTCGGGCGGAAGCTCATGCTCTACCTCTTCTGCTTCTTAGCCACGT
GGACCTTCCCCGTCATCAACCGCACCGTTCAAATGGCCACCGGGAAGACG
TTACCCTCGCTCCTCTTCCTACACgtacgtagaacgacgacccggccccc
cattgccttctcccctcgttccttccctcttgaccatccacccctggccc
atttcattcttggctcaaatccctccctccttccttccctccctcccttc
ctccctcccttcctccctccctcccccctcgcgcagGTCATCTCCAAGCC
CTCCATGGGTCTGTGGGACTCCCTTGTCTATGGTTCCGTGACAGCTGTCG
TCAGTAGTCGCCTCAAAGTAGGGAAATACAGACGGCACAAACAGGGCGAC
AATCCCTCCCTGGAATCGGTTGACCCTGCGCAAGCCGAGGGGGAGGGCGG
GAGGGAGGAGGAGGAGGGGGAGTGGGCGGACGAAGACGTGCACTGGCTGG
ATGAACCGGAGGAGgtgatgaagttgggcatggggggggaagtggccatg
atggaggaagggaaggggggaagggagggatggggatgaacgggacagaa
gcagaggagGCTGGAAGAGGAGAAGGGGAACGAGGAGGTGGAGGAGGAGG
GGGAGAAGGAGGAGAGGGAAGGAGGGAAGATAGAAGAAGATCCTCCTCAG
TAGGGGCATCCGCAATAATAACAGCAGCAGTGGCAGCAGCAACAGCCGCC
GCAGGAGGAGGAGGAAAAGCAGCAGCAGCGGTGGCAAGCCGGAAGGAGGG
GGAGGACGAGGGGGAGGAAGTAGTCGCCGTGCAGATGTATGACAACACCA
CCGCCGGTCTCTCCAAGAGCAAGAGCTGCAGTAGCAACAGCAGTACGACA
AACATCTCTCTCATCAGCAGCAGTAGCAGCAAGAGGTTCAAGAAAGAAGG
AGCCGTGGGAATGAGAACCTCCTCCCCATCCTCACTCGTTCCCTCGAACA
GCACGAGCAACGGCATGACGCGCTCCCGATCCTTCACCACCCCCTTCTCC
TCCCTCACATCCGCAGCCTCATCCGCCGCTGCTGCTGCCGCTGCTGCTCT
CCCCTCGCGCTCCCCCAAATCCAAATTCTCCTCCCCCCCTTCCTCCCCTC
CCGTCTCCACCAACCGACCATCTTCCCTTCCCCCTCCTCCACCTCCCCCT
CCCCTCCTCGCCAGCATCTTTGTCTCCACCTACAACTGCGGCTCCCTCCC
CCCCTCCTCCCTCGCGTCCTTTTCTCCGTCCTCCCCCTTATCATCGTCCC
CGCCCCCCTCCTTCTTCCTCTCGTCCTGGATACCTCTCAACCACGATCTG
TACATCATCGGAGTGCAAGAGCTGAAGGGGCTACAAACCCTTAAAACCCT
CCTTCATGCCCACTTAGGGGGGCCGTCCTGCTATCAGATGTACGGGCAGG
AAATCGGCGTCGTGGGAGGCTCCTCCGCATTTGCCGAGCGGCTGGGGGCC
ATCGCCTTATTGGTGTATGCCAGGACAGAGGACGTCAAACGCGGGGTGTT
CGAAATGACGGCCGTGCCCAAGGCAGGAGGGCAGCAGGTGCTTCAAGGGA
AGAACTTGTTGGTGTGTAGGGCGGGGAATAAAGGGGCTGTATGCCTACCC
TTCCGGTACCACCAAAGCACGCTGGTGGTGGCTGCGGCCCATCTGCCCGC
GGACGGATCGCGGAGGAGCAAAGTTGAGAAACGGAATGCCAACCTGAGgt
acgtctcttggagggggtccggtcgttccctccctccctccctccctccc
tcccttcctttcagccttcgaccatgttccaccctgctggtctcttcctc
tgactctcccctccctccctcccttagGTGCGTCTTCCGCGATGCCGACG
TCGCGGGAGAGCTGTTTGACGTCCATCTCCAGTACCAGCACACCATCTTC
CTCGGTGATCTTAACTgtaagctcccatccctccctccctcgtcccctcc
ctccctccctcgtttcctccccctcttgcctgtccatcggtcggtcgata
atgctcggctttccctacgattaccctccccaccaccaccaccaccatct
aaacacccacgcacccgtccctccctccttcagACCGTATGCTGGGCACG
CCCGAGGAGGTGCTTGTTGATATAGCGGACGCCGCGACCAAGGCAAAGCA
CGACACCCAAGACCATCACCAGAAGAAGCAGAAGAAGAGGAGGAGGCAGC
AACAGCAGCAGCAGGAGCAGCGGTTGCCCATGAAGGAGAAAGTGGTGGTG
GACGAGGAGGAAGGGAGGGAGAGAGGGAAGAAGGGCAGCACTGATATCCC
GCTCGTTGCTGACGCTGCCAGGACAGATGAGGTTTCCTCCCCATCCTCCT
TTGCTTCCTCCCCCTCATCCTCGTGTCCTCCCTCCATTTCCACCTCCATC
TCTACTTTTACCTCCCCCCCCGCCGGGCGCCGCCCTCGGAGCAACAGTAA
CAGTAGCAGTAGCAGCAGTAGCAGCAGTAGCAGCAACAAAACAGGCGACG
GAAACAGCAGCAGCAGCGACGAGGAGGTGGAGGAGGAGGAGGACGAGACC
GAGAGCATAGCCGAAGGGACCGATCCTTCCCTCCCTCCCTGCCCCCACTG
GTTGGCCGCCCGATACCGAGGTCTGGAAGCAGGGGCTGTCCCGCAGGCCC
CAAACAGGCGTTGGAATGCGTTGGTAGAGGCGAGGGACGAGTTGCGGAAG
GCCCAAGGGATGGGCTGTGTCTTGCACGGCTTCATCGAGCACCCTATCTC
GTTTCCTCCGAGTTACCGGCGTGTGCGGGGAGAGAAGGGGAACGCGGGCG
ATTACACGGACGTGCACCGGCTGAGGAAAGCCTATTCTACGTATCTGGAT
GCGAACGGGAAGACGGTGGAGGTGTTGCCACCTAGGGAGGGAGGGGGGGA
GGAAGAGGGGGAGGATCGGGAGGAGGAGGGACCCACGGCGACGCCCGTGT
TGAGTCGGAGGGGGAGTGGGGACTCCACTCCAGTGACGGAGGGCGCTAAG
GATGGCGCGAAGGAGGGAGAGGGAGGAAAAGCGAGTTGGGCGTGGGAAGA
TGACGACTACGACAATCGTGGAGGAGGAGGGAAGATGATCATACATGACA
CAGCACTTGCAGCAGCAGCAACAGCTACCAGCAGCACCGTCACCACCACC
ACCGCGATCACGGCCGCGGAAGCCGCCGCCACCTGCAAGGTGCGCGTTCC
ATCCTACACAGACCGGATTTGGATCCACTCCCTCCCAGGCCTGGGTCGTG
CCCTCTCTTTTCAAGCCTATGAACTATGCGACGCCCTCCTCCAAAGCGAC
CATCGTCCCGTTTCGGCTGTCTTGACACTGGACCTCCGCCCAGCCCTGGA
CACGCACCGTGCCTATCTGTATGCGTATGCGCCTCGCACCCCTCAGCAGC
AGCAGCAACTGCCCCCCAGAACCCCTACGATGATCATGAAGAGCAAGATG
TCTTCGTTCTTCAACAGTGCCAGCAGTAGCAGTAGCAGCAGCAGCAGCAG
CAGCAGCATAAAGCAACAGCTGTCTGCTGCCGGTGTAGGGGGAGGGAGCA
GCAGGTCGGCCAAAAACGAGTTGCCCGCGGTGTGTGAGAAGGTCGCAGCC
GGAGAAGCAGGAGAAGCAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGG
AGGAGGAGGAGGACGGACAGGTGACAGCAGCATCAGTAACGGGGGAAATC
ATTCTGTGCTAGTGCCTGGAGGGAAGGAGGGCAGGAAGGAGGGGGGGAAG
GAGGGAGGGAAGGCAGGTGGGGACGTGGGCAGTAAGGCCCGACCTCTGTT
ATCCTTGGCTTTGTCGTCGCCTGGTCCGCCGGCAGGAGGAGATGGGGAGG
AAGGGAAGGAGAAAGACGTCAACCCCTCTCCTTCCTTCTCCTCTTCCTCC
TCTGCACGTGCCCGCACCCCCACAGCCGGCTCTTCAACCCAGTCCTCCCC
CTTCACGGCTTCCTCTCCTTCTTCCCCCTCCCCCTCCCCCTCCCCCGCCC
CCTCTTCTTCCTTCTTCAGCAAAGCGAGAGCTCGTCCCTCACTCTCCCTA
CCCAGCGCACCCCTGCTCCACATTTCCTCCCTCTCTCCCTCAATAGGCGG
ACGTTTCAAAAAGTGGGGAGGACACAAGGCGCACTCCGCTTCCTCCCTCA
CTCCCTCCTCCTCGTCCGCAGCAGCTGCTTCTGCTACTGCTGCTATGGCG
GGTGTGGCGTTGACGGCGAGCTTGCCCTCCTTCCCTGCCTCGTCGCCAAC
CAGCACACCGCTGCTGGTTTTCTATATCAAGCTTTCCAATATGTCGATAG
CCTTTCAAACCCCTCCCTTTCTTCCCGGCCTCCCTCCCGCCCTCCCTTCC
GGTGCCCCCTCTACCTCACGGAGTATGAGCAGCCGGACGTCGGGAGGAGG
GAAGGAGGGAGGGAAGGAGGGACGGGCGTTTATTCGCTCTACCTCAGCTA
TCCCCACCACACACGACAGCACCCTCCCTCCCCCTTCCCTCCGTGCTCCC
TCTTCCTCCTTCATCGGCCTTGCCAACTCCTCCGTCCTCACCAGCAACGA
CGGCACCGACCCTCTCCCCCTCCCTCCCCCAGTCCCTCCCTCCCACCCTC
CTGTGGCCCGCCTCGCGGTCCTCTTTCCCCTCCCCAGCGAGAACCAGCTC
GAGCACACCCACCGCACATTGGAATATCTCGATGCTACCATCTGCCACGA
GTGGTCGACATGGTCACGAGACAATAAGTCCTTGTTGAAGTCCACCTCCT
ACCACGAATGGCCGCAGGCAGGGACGGAGGAAGGGATCGTGATTTCCGCG
GCGGTGAAGGTGGGGGGTTCATTGCACGCTCTGTTGAAGCTGGTGGATGG
GAATGGAGGCGAGATGGCCCAGGCGGTGATTCCGCTGCCGGGACCGAGGG
AGGGAGGGAGGGAGGGGGGGAAGGAGGGGGGACGAAAGCGGGTGAGGGTG
ACGGCGAGTTTGACGAAGCACACGGCTTATAGGGGTGAATTGACGTGTGA
TGTGGAGGTGACAAAGGTGAAGATCCACAGAGACTCGAGAGGAGGGCAGA
GCGGGAGGGAAGGCGGGAGGGAGGGAGGGATGACTACAGCGCCGTCCACT
GCCGCGTCCAGCCCCGGCCCAAGCACGCCAAGGGCGGGTACTGAGAGACA
TAGGAGGGAGGGAGGCAGGGATGGAGGGAGAGAGGGAGGACCGAAGGTAC
ACGTGGAGAATATGCAGGCAGTGCTGGAGGGGAAGAGCTTCGTTCCTCCT
CCTCCTCCTCCTCCTCTTCCTCCTCCTCCTTCACCTCCTCCTTCTGCCGT
TAACCCTCTTCGTCTTCCAACTTCTTCCTCCGGGTCGTCGTCTTCCGTAC
CTTCCTCCCTTCCCTCCTCACGCTCTCGCATCCAGTCGAGCACCGTCCCT
TCATGCCTTAATCCTTCTGCTGCTACTGCGAAAGGAGGAAAAGCGGATTC
TCCATCGCGTTCCTCCCCCCCTCCCTCCTCCAGTGCGAGGGAGGAAGGGA
AGGAGAAGATGGGGTTGGTGATGCCATCTGTGCTGTCGTCGCTGTCGGTG
ACAGAGGAGGATGATGATGATGGCATGATGTTCTAG
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protein sequence of NO21G00500.1

>NO21G00500.1-protein ID=NO21G00500.1-protein|Name=NO21G00500.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1906bp
MGNVPPFPMLAPATIVTMVQVEAGISIVGLTISLMALAYDHIIAKEPVRF
HAHMTIVLFIFDLLDAIPMVLSRTTFGHPWLCDAQGIAITILEVAIVLWN
SFMALQVYRWILLKQDTTSLRRQLQPAIIFIVSYSLINTIFWRLAVAPMD
GNADLWCWIPKYMPWSRFGSVYVYVYPSMLWVSWVFIQVYRRVVITPRKG
SSASVKQAAARLRVGRKLMLYLFCFLATWTFPVINRTVQMATGKTLPSLL
FLHVISKPSMGLWDSLVYGSVTAVVSSRLKVGKYRRHKQGDNPSLESVDP
AQAEGEGGREEEEGEWADEDVHWLDEPEEAGRGEGERGGGGGGGEGGEGR
REDRRRSSSVGASAIITAAVAAATAAAGGGGKAAAAVASRKEGEDEGEEV
VAVQMYDNTTAGLSKSKSCSSNSSTTNISLISSSSSKRFKKEGAVGMRTS
SPSSLVPSNSTSNGMTRSRSFTTPFSSLTSAASSAAAAAAAALPSRSPKS
KFSSPPSSPPVSTNRPSSLPPPPPPPPLLASIFVSTYNCGSLPPSSLASF
SPSSPLSSSPPPSFFLSSWIPLNHDLYIIGVQELKGLQTLKTLLHAHLGG
PSCYQMYGQEIGVVGGSSAFAERLGAIALLVYARTEDVKRGVFEMTAVPK
AGGQQVLQGKNLLVCRAGNKGAVCLPFRYHQSTLVVAAAHLPADGSRRSK
VEKRNANLRCVFRDADVAGELFDVHLQYQHTIFLGDLNYRMLGTPEEVLV
DIADAATKAKHDTQDHHQKKQKKRRRQQQQQQEQRLPMKEKVVVDEEEGR
ERGKKGSTDIPLVADAARTDEVSSPSSFASSPSSSCPPSISTSISTFTSP
PAGRRPRSNSNSSSSSSSSSSSNKTGDGNSSSSDEEVEEEEDETESIAEG
TDPSLPPCPHWLAARYRGLEAGAVPQAPNRRWNALVEARDELRKAQGMGC
VLHGFIEHPISFPPSYRRVRGEKGNAGDYTDVHRLRKAYSTYLDANGKTV
EVLPPREGGGEEEGEDREEEGPTATPVLSRRGSGDSTPVTEGAKDGAKEG
EGGKASWAWEDDDYDNRGGGGKMIIHDTALAAAATATSSTVTTTTAITAA
EAAATCKVRVPSYTDRIWIHSLPGLGRALSFQAYELCDALLQSDHRPVSA
VLTLDLRPALDTHRAYLYAYAPRTPQQQQQLPPRTPTMIMKSKMSSFFNS
ASSSSSSSSSSSSIKQQLSAAGVGGGSSRSAKNELPAVCEKVAAGEAGEA
GGGGGGGGGGGGGGGRTGDSSISNGGNHSVLVPGGKEGRKEGGKEGGKAG
GDVGSKARPLLSLALSSPGPPAGGDGEEGKEKDVNPSPSFSSSSSARART
PTAGSSTQSSPFTASSPSSPSPSPSPAPSSSFFSKARARPSLSLPSAPLL
HISSLSPSIGGRFKKWGGHKAHSASSLTPSSSSAAAASATAAMAGVALTA
SLPSFPASSPTSTPLLVFYIKLSNMSIAFQTPPFLPGLPPALPSGAPSTS
RSMSSRTSGGGKEGGKEGRAFIRSTSAIPTTHDSTLPPPSLRAPSSSFIG
LANSSVLTSNDGTDPLPLPPPVPPSHPPVARLAVLFPLPSENQLEHTHRT
LEYLDATICHEWSTWSRDNKSLLKSTSYHEWPQAGTEEGIVISAAVKVGG
SLHALLKLVDGNGGEMAQAVIPLPGPREGGREGGKEGGRKRVRVTASLTK
HTAYRGELTCDVEVTKVKIHRDSRGGQSGREGGREGGMTTAPSTAASSPG
PSTPRAGTERHRREGGRDGGREGGPKVHVENMQAVLEGKSFVPPPPPPPL
PPPPSPPPSAVNPLRLPTSSSGSSSSVPSSLPSSRSRIQSSTVPSCLNPS
AATAKGGKADSPSRSSPPPSSSAREEGKEKMGLVMPSVLSSLSVTEEDDD
DGMMF*
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Synonyms
Publications