NO21G00410, NO21G00410 (gene) Nannochloropsis oceanica

Overview
NameNO21G00410
Unique NameNO21G00410
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1810
Alignment locationchr21:151329..153138 -

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr21genomechr21:151329..153138 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO21G00410 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniR052ncniR052Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR062ngnoR062Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO21G00410.1NO21G00410.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO21G00410.1NO21G00410.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO21G00410 ID=NO21G00410|Name=NO21G00410|organism=Nannochloropsis oceanica|type=gene|length=1810bp
CCCACATCCATGCACCCCACTGCACGCAATTTTTTATTTTAAAGGTATCA
AATGAGCATGAATCTCATGCATACTTTTCTCAAGCTATTTACCAAAGTTG
GAGGGGAGATACGGTGTACGCGTCGAGAATTTGGTTCCCTCGTGAGGGAT
CCCTTAGCTGCGCTCGTCCAACCCGCGCTTTGTTCTTCGCATAGCTTAAT
GCTCGTCCCGCCATTGCCCCCATCTCCTCATTGAAATGCCTCTTCTTGCC
CATGCTGCCAGCACAACTGTTGTTCCTTCCAGAAACACAAATGTGCCGCC
CTTAATCCCAACTGCCTGCGGCAGTGGTCCAGTCCTCACTTACATGAGCC
ACTGCGCGCCTCTCCACCCTAACTTCCCATCCTGGCCTTATACCCTCCCA
TTTCTTCAATTTCGAGCACAGCACCACCACAGAGGACGTAGCCATGGAGG
ACGACAACAGCAACACAAGCTTTTCTTCGGACACTCTTTCTTTGGCCTCA
GGCGCCACCAGCCCACGTCGCAGTCTTTTTATCGACTTTCGGAGAGgtaa
gatgccgctgtgcttgcgcgcctcctgaaaagaggccgcccgccttccgt
ctttaaaaccttgtttcacccgttcgcctgtgaacctttgtccatacgct
ggcctttccccttcctggctccttttcccttgccgtgccttccactcgcc
accttccagtcctccaccctctcagccacactccctattcaacgctatct
ttctttcctctccctcccgtctccactgcagGCGGTGAAAGCCAGACACA
CAATACGATGACGCACACCTCCCAGCTTCAGCCACAACGCAGCCCCCTCG
CCTCCCTCCAACCAAGCATTCTTAACGCCAAGGCCAACAACAGCAGTAAC
AGCAGCAGTAGTAGTAGTAGCAGCAGTGACGGCTGCAACGGCAACGAAAC
GGGCAAGTCGCCTGTCCAGAAAAAGGGGCGCAAGCTTCTAACAATCAAGC
CTTGGGATAGACCGTGGAGTGTGGCTACCGGAGCATCTTCCGCCCCCTCC
TCGTTCTCCTTCCCTTCCTCATCGGGCTCGAGCAAGAAACGGAGACACAG
TGACGAAGGGGAGGAAGAAGCGGAGGAAGAGGAGGAAGAGGAGGAGCCTT
CGCCAATAGGGGACTGTAGTGATGAGGACTGGGATGAGAACGGGGAGGAG
GAAGAGGTGTGGGGGAGGGGAGGGAGTGCGTACGGTCCAGCAAGCAAAAA
ACCGGCACTAGCCTCGATATGGGAAGGGGAGGGGGAGGGGGAGGAAGAGG
TGGGAGTGGTACAGCAAGGTGGGAATCAGGAAGAGAAGCAGCGAAAGGAA
AATGAGATGGGAGGAAGAAAGAAAGGGGTGGTAGGGGCGCAGGAACAGGA
TAACTTGCGGTTGTTTGCGAGGGAGGAGGAGGAGGAAAATGAAGAGGGAA
AGCAGGAGCAGGAGCTGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAG
GAGGAGGAGACTAATTAAGAGGGATAAATAGAGGCATACATTGAAAGGAA
AAATAGAGGGGAGGGTGATAGAGAGGGAAAGGAGGGAAAATGGAAGGAGG
GAGGAATGATAGCAGTAGATTATATCATAGAAAGGGCTGGTGTATGATGA
GTGTATCTTTGGGAGACAGTGAGGAGACTCCATTTTTAGTTAATTCATTC
TTTTGAATAAATAAAGGAATTGTTCGGTTCTTGGTACGCAGGTATCTCGG
GGTCTCACCGGCCGATTGAAACGCCAACAATGTGCACGAACAGTATGAAA
GGAGAGGGGG
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protein sequence of NO21G00410.1

>NO21G00410.1-protein ID=NO21G00410.1-protein|Name=NO21G00410.1|organism=Nannochloropsis oceanica|type=polypeptide|length=280bp
MEDDNSNTSFSSDTLSLASGATSPRRSLFIDFRRGGESQTHNTMTHTSQL
QPQRSPLASLQPSILNAKANNSSNSSSSSSSSSDGCNGNETGKSPVQKKG
RKLLTIKPWDRPWSVATGASSAPSSFSFPSSSGSSKKRRHSDEGEEEAEE
EEEEEEPSPIGDCSDEDWDENGEEEEVWGRGGSAYGPASKKPALASIWEG
EGEGEEEVGVVQQGGNQEEKQRKENEMGGRKKGVVGAQEQDNLRLFAREE
EEENEEGKQEQELEEEEEEEEEEEEEETN*
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Synonyms
Publications