NO20G02270, NO20G02270 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO20G02270 vs. NCBI_GenBank
Match: EWM22009.1 (beta-ig-h3 fasciclin [Nannochloropsis gaditana]) HSP 1 Score: 375.6 bits (963), Expect = 2.000e-100 Identity = 197/336 (58.63%), Postives = 245/336 (72.92%), Query Frame = 0 Query: 57 QADLVTTLAADGRFTRLVPLLKTAGLDITLRSPGPWTLLAPTDAALDDIGTNLTLSMAAREPRRHLAPLLSYHIIPGKAMGLTELVAAGDTRSRIKTLERSGLSIAVYGGTILIDEARVTEWGNEASNGVIHVLDSLLLPCLPADFNPYESAEAAAEGPVLGVXXXXXXXXXXXXXXDEDKDTQTRFRKAEIKHARLAMLASVGVLGQEALLPGHPPALSALLKMGEEHSAATAAMTXXXXXXXPLLPIAVAFLPGVIYEVYFNLVKAGREERSVLGQKEEALTRILRQESPDFEEEREAKRQEVALGNKELNNGRLAMMAVVGMLAQELVTGRGI 393 + DL++TLA DGRFTRL+ L K GLD TL PGPWT+LAPTDAALDD NLTL +AAREP+RHL PLLSYHIIPGKAMGL +LVAAGD R+R+KTLERSGLSIAVYGGT+L+DE R+ EWG EA NGV+HV+DSLLLP LP+DF+P+ + EAA+ GPVLGV +D TQ R R AEIKHARLAMLA++G+L QE ++P HP A +L + S A P+ +A PGV +EV+ +L +A +++ KEEALT+IL++ESPDFE ERE +R+++ GN+ELNNGRLAM+AVVGML QE+VTGR + Sbjct: 93 ETDLLSTLAQDGRFTRLLHLFKEVGLDATLSGPGPWTVLAPTDAALDDQVANLTLIVAAREPKRHLTPLLSYHIIPGKAMGLGDLVAAGDARTRVKTLERSGLSIAVYGGTVLVDEGRILEWGMEAGNGVVHVMDSLLLPALPSDFDPFAAPEAASPGPVLGVTAPLGCWDPLGLWTGKDAATQARLRDAEIKHARLAMLAAIGILTQELVVPTHPYAFQPVLDALRD-STHMAPDVSFLLPLPPIAALAAILAPGVAWEVW-SLRRASKDKAPGRPSKEEALTQILKRESPDFEAEREEEREKIDAGNRELNNGRLAMIAVVGMLVQEIVTGRSV 426
BLAST of NO20G02270 vs. NCBI_GenBank
Match: WP_089681895.1 (fasciclin domain-containing protein [Halomonas gudaonensis] >SDI68678.1 Uncaracterized surface protein containing fasciclin (FAS1) repeats [Halomonas gudaonensis]) HSP 1 Score: 100.9 bits (250), Expect = 9.300e-18 Identity = 55/140 (39.29%), Postives = 81/140 (57.86%), Query Frame = 0 Query: 57 QADLVTTLAADGRFTRLVPLLKTAGLDITLRSPGPWTLLAPTDAALDDIGTNLTLSMAAREPRRHLAPLLSYHIIPGKAMGLTELVAAGDTRSRIKTLERSGLSIAVYGGTILIDEARVTEWGNEASNGVIHVLDSLLLP 197 Q D+V T A G+F LV ++ AGL TL+ GP+T+ APTDAA D + + + R L +L+YH++PG+ M + A T T++ L I G+++I++A V + EASNGVIHV+DS+LLP Sbjct: 32 QKDIVDTAVAAGQFETLVAAVEAAGLVDTLKGEGPFTVFAPTDAAFDALPEGTLDELLMTDNRDQLQAILTYHVVPGRIMAADAMEADSAT-----TVQGQDLRITTMNGSVMINDATVVDADIEASNGVIHVIDSVLLP 166
BLAST of NO20G02270 vs. NCBI_GenBank
Match: WP_008673697.1 (fasciclin domain-containing protein [Rhodopirellula sallentina] >EMI58247.1 beta-Ig-H3/fasciclin [Rhodopirellula sallentina SM41]) HSP 1 Score: 99.4 bits (246), Expect = 2.700e-17 Identity = 59/154 (38.31%), Postives = 84/154 (54.55%), Query Frame = 0 Query: 58 ADLVTTLAADGRFTRLVPLLKTAGLDITLRSPGPWTLLAPTDAALDDIGTNLTLSMAAREPRRHLAPLLSYHIIPGKAMGLTELVAAGDTRSRIKTLERSGLSIAVYGGTILIDEARVTEWGNEASNGVIHVLDSLLLPCLPADFNPYESAEAA 212 AD+V T G F LV K AGL TL+S GP T+ APTD A + ++ E + LA +L+YH++PGK M + +G KT++ + + V G ++ID A V + E NGVIHV+DS++ LPAD + E+A AA Sbjct: 24 ADIVDTAVGAGSFQTLVAAAKAAGLVDTLKSDGPLTVFAPTDDAFAKLPDGTVETLLKPENKAKLAAILTYHVVPGKVMAADVVNVSG-----AKTVQGQQVDVKVDGSNVMIDNANVVKTDIECDNGVIHVIDSVI---LPADKSVVETAVAA 169
BLAST of NO20G02270 vs. NCBI_GenBank
Match: WP_027316874.1 (fasciclin domain-containing protein [Microvirga flocculans]) HSP 1 Score: 99.4 bits (246), Expect = 2.700e-17 Identity = 60/158 (37.97%), Postives = 93/158 (58.86%), Query Frame = 0 Query: 41 GLFASSSSSPSTPPSPQADLVTTLAADGRFTRLVPLLKTAGLDITLRSPGPWTLLAPTDAALDDIGTNLTLSMAAREPRRHLAPLLSYHIIPGK--AMGLTELVAAGDTRSRIKTLERSGLSIAVYGGTILIDEARVTEWGNEASNGVIHVLDSLLLP 197 G+ AS++S + D+V T AA G+F L LK AGL TL+ PGP+T+ APTDAA + ++ E + L +L+YH++PG+ A +T+L A KT+ L+++V G ++I++A VT+ ASNGVIHV+D+++LP Sbjct: 17 GIVASAASVRAA----DQDIVETAAAAGQFKTLASALKEAGLVSTLKGPGPFTVFAPTDAAFAKLPAGTVENLLKPENKDKLTAILTYHVVPGRVTAADVTKLKEA-------KTVNGKMLNVSVKGSGVMINDANVTQADITASNGVIHVVDTVILP 163
BLAST of NO20G02270 vs. NCBI_GenBank
Match: WP_040185887.1 (fasciclin domain-containing protein [Halomonas salina]) HSP 1 Score: 99.0 bits (245), Expect = 3.600e-17 Identity = 52/138 (37.68%), Postives = 80/138 (57.97%), Query Frame = 0 Query: 59 DLVTTLAADGRFTRLVPLLKTAGLDITLRSPGPWTLLAPTDAALDDIGTNLTLSMAAREPRRHLAPLLSYHIIPGKAMGLTELVAAGDTRSRIKTLERSGLSIAVYGGTILIDEARVTEWGNEASNGVIHVLDSLLLP 197 D+V T A G+F LV +K A L TL+ GP+T+ APTD A D + S+ E + L +L+YH++PGK M + A T T++ ++I G+++I++A V + EASNG+IHV+DS+L+P Sbjct: 35 DIVDTAAGAGQFETLVAAVKAADLVETLKGEGPFTVFAPTDEAFDALPEGTVASLLEPENQEQLQSILTYHVVPGKIMAEDAMAADSAT-----TVQGQDITITTMDGSVMINDATVVQADIEASNGIIHVIDSVLMP 167
BLAST of NO20G02270 vs. NCBI_GenBank
Match: WP_090018641.1 (fasciclin domain-containing protein [Limimonas halophila] >SDF50774.1 Uncaracterized surface protein containing fasciclin (FAS1) repeats [Limimonas halophila]) HSP 1 Score: 98.6 bits (244), Expect = 4.600e-17 Identity = 57/154 (37.01%), Postives = 87/154 (56.49%), Query Frame = 0 Query: 59 DLVTTLAADGRFTRLVPLLKTAGLDITLRSPGPWTLLAPTDAALDDIGTNLTLSMAAREPRRHLAPLLSYHIIPGKAMGLTELVAAGD---TRSRIKTLERSGLSIAVYGGTILIDEARVTEWGNEASNGVIHVLDSLLLPCLPADFNPYESAE 210 DLV T A D RF+ LV ++ AGL TL+ GP+T+ APT+AA D+I + S+ E R L +L+YH++ G M +GD T + T++ + L + G + I++ARV + EASNGVIH +D++++P P + AE Sbjct: 26 DLVDTAAGDTRFSTLVEAVQAAGLVETLKGEGPYTVFAPTNAAFDEIPEDRLNSLLKPENRDALRDVLTYHVVAGNVM-------SGDIAGTEQNVDTVQGTALRVDATGDGVRINDARVVQADIEASNGVIHAIDAVVMPRAQLGERPPKEAE 172
BLAST of NO20G02270 vs. NCBI_GenBank
Match: WP_012373934.1 (fasciclin domain-containing protein [Opitutus terrae] >ACB74396.1 beta-Ig-H3/fasciclin [Opitutus terrae PB90-1]) HSP 1 Score: 98.6 bits (244), Expect = 4.600e-17 Identity = 62/167 (37.13%), Postives = 87/167 (52.10%), Query Frame = 0 Query: 31 VPA-CGGAVVHGLFASSSSSPSTPPSPQADLVTTLAADGRFTRLVPLLKTAGLDITLRSPGPWTLLAPTDAALDDIGTNLTLSMAAREPRRHLAPLLSYHIIPGKAMGLTELVAAGDTRSRIKTLERSGLSIAVYGGTILIDEARVTEWGNEASNGVIHVLDSLLLP 197 VPA GG VHG D+V ++ G F LV +K AGL TL+ PGP+T+ APTD A + + E ++ LA +L+YH++PGK M AA + KT+ L+I V GG + ++ A+V ASNGVIHV+DS++LP Sbjct: 20 VPAHAGGGAVHG---------------SKDIVAVASSAGNFNTLVAAVKAAGLVETLQGPGPFTVFAPTDEAFAKLPAGTLDELLKPENKKKLAGILTYHVVPGKVM------AADVKPMQAKTVNGQTLAINVAGGGVTVNGAKVVATDVAASNGVIHVIDSVVLP 165
BLAST of NO20G02270 vs. NCBI_GenBank
Match: WP_104830028.1 (fasciclin domain-containing protein [Marinicaulis flavus] >PQA88791.1 hypothetical protein CW354_06895 [Marinicaulis flavus]) HSP 1 Score: 98.6 bits (244), Expect = 4.600e-17 Identity = 63/169 (37.28%), Postives = 94/169 (55.62%), Query Frame = 0 Query: 30 PVPACGGAVVHGLFASSSSSPSTPPSPQADLVTTLAADGRFTRLVPLLKTAGLDITLRSPGPWTLLAPTDAALDDIGTNLTLSMAAREPRRHLAPLLSYHIIPG--KAMGLTELVAAGDTRSRIKTLERSGLSIAVYGGTILIDEARVTEWGNEASNGVIHVLDSLLLP 197 P+ A A+ G A+++ + D+V T G+FT L L AGL TL+ GP+T+ APTDAA + + S+ E + L +L+YH++PG KA + +L +A T+ + LSIAV G ++I++A VT +ASNGVIHV+DS+LLP Sbjct: 6 PLIAAAAALAAGFGAANADHHG---KAKKDIVDTAVEAGQFTTLATALTEAGLVQTLKGEGPFTVFAPTDAAFEKLPEGTVESLLKPENKDQLTAILTYHVVPGKVKAADVVKLDSA-------DTVNGASLSIAVKDGAVMINDATVTAADVKASNGVIHVIDSVLLP 164
BLAST of NO20G02270 vs. NCBI_GenBank
Match: WP_028640098.1 (fasciclin domain-containing protein [Novosphingobium acidiphilum]) HSP 1 Score: 97.8 bits (242), Expect = 7.900e-17 Identity = 54/143 (37.76%), Postives = 80/143 (55.94%), Query Frame = 0 Query: 57 QADLVTTLAADGRFTRLVPLLKTAGLDITLRSPGPWTLLAPTDAALDDIGTNLTLSMAAREPRRHLAPLLSYHIIPGKAMGLTELVAAGDTRSRIKTLERSGLSIAVYGGTILIDEARVTEWGNEASNGVIHVLDSLLLPCLP 200 + D+V T A G+F L L AGL TL+ PGP+T+ APTDAA + ++ E + L +L+YH++PG T + A S KT+ + + I V GT++ID A+V A+NGVIHV+D++L+P P Sbjct: 29 EKDIVDTAVAAGQFKTLTAALDAAGLVATLKGPGPFTVFAPTDAAFAKLPEGTVTTLLKPENKAALTAILTYHVVPG-----TVMAADVVKMSEAKTVNGAMVRITVNNGTVMIDNAKVVMTDIVATNGVIHVIDTVLMPPQP 166
BLAST of NO20G02270 vs. NCBI_GenBank
Match: WP_045568893.1 (fasciclin domain-containing protein [Vibrio sp. S234-5] >KJR39617.1 fasciclin [Vibrio sp. S234-5]) HSP 1 Score: 97.4 bits (241), Expect = 1.000e-16 Identity = 53/151 (35.10%), Postives = 84/151 (55.63%), Query Frame = 0 Query: 46 SSSSPSTPPSPQADLVTTLAADGRFTRLVPLLKTAGLDITLRSPGPWTLLAPTDAALDDIGTNLTLSMAAREPRRHLAPLLSYHIIPGKAMGLTELVAAGDTRSRIKTLERSGLSIAVYGGTILIDEARVTEWGNEASNGVIHVLDSLLLP 197 SS+ + D+V A+G FT LV +K AGL TL+ GP+T+ APTD A + + E + L +L+YH++PGK M +++ G + T++ + I VYGG +++D A V +ASNGVIHV+D++++P Sbjct: 20 SSAQAHNHGMKKTDIVDVAVANGSFTTLVAAVKAAGLVETLKGDGPFTVFAPTDEAFAKLPEGTVEMLLKPENKDKLVAILTYHVVPGKVMA-ADVIKLG----KATTVQGQDVMIKVYGGKVMVDNANVVATDVKASNGVIHVIDTVIMP 165 The following BLAST results are available for this feature:
BLAST of NO20G02270 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO20G02270 ID=NO20G02270|Name=NO20G02270|organism=Nannochloropsis oceanica|type=gene|length=2174bpback to top protein sequence of NO20G02270.1 >NO20G02270.1-protein ID=NO20G02270.1-protein|Name=NO20G02270.1|organism=Nannochloropsis oceanica|type=polypeptide|length=398bpback to top Synonyms
Publications
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