NO20G02220, NO20G02220 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO20G02220 vs. NCBI_GenBank
Match: XP_008603903.1 (hypothetical protein SDRG_00213 [Saprolegnia diclina VS20] >EQC42480.1 hypothetical protein SDRG_00213 [Saprolegnia diclina VS20]) HSP 1 Score: 83.2 bits (204), Expect = 2.400e-12 Identity = 70/241 (29.05%), Postives = 111/241 (46.06%), Query Frame = 0 Query: 234 HPDAWYNLGRIYAEGGKG----VKRDVDRAKDCFEKAARHPEEKGGAAAYMLGHLCRGVEEGGEGGKEGGGDVRKAVEWWKEACDIKDHPAACYDLALLYRNGEGQ--VPPSYSLYRHYIAKAEGLGDAEALFHLGHMYLQGEEGGTEEGREGEWTRIEKNEGKAKEYFERAGREGGHAEAMTTMGVLRYREGRWEEAARWYEAGGEAGSEEAWRNLASMYIAGEGVAKDEGMARNIVKIL 469 HPDA YNLG +Y G + D +RA F KAA E +A + +GH+ G + ++ + A D K H A Y LA LYR+G+ + P ++ Y+ A DA+A++ + Y G T +A EY+ +A + HA+A+ +G L+Y + +A ++Y+A + S AW+NLA MY G GV + + A +I+ +L Sbjct: 245 HPDALYNLGLLYYNGSANSVPPIPTDAERAMSYFMKAA---EVGDPSALFFMGHVLH------VGHDVVPANATSSLLMLEAAAD-KGHGGARYYLAQLYRSGDETMGIAPDAEVFWRYLEAAVACDDADAIYCMADAYHYGLPPLTAPDMR-----------QAIEYYTQAAKL-EHADALCCLGALKYERREYTKAFQYYQAAADRHSMSAWKNLADMYYTGTGVPQSKKTAESILDML 463
BLAST of NO20G02220 vs. NCBI_GenBank
Match: XP_008870810.1 (hypothetical protein H310_07238 [Aphanomyces invadans] >ETW00675.1 hypothetical protein H310_07238 [Aphanomyces invadans]) HSP 1 Score: 83.2 bits (204), Expect = 2.400e-12 Identity = 78/244 (31.97%), Postives = 116/244 (47.54%), Query Frame = 0 Query: 234 HPDAWYNLG-RIYAEGGKGVK----RDVDRAKDCFEKAARHPEEKGGAAAYMLGHLCRGVEEGGEGGKEGGGDVRKAVEWWKEACDIKDHPAACYDLALLYRNGEGQ--VPPSYSLYRHYIAKAEGLGDAEALFHLGHMYLQGEEGGTEEGREGEWTRIEKNEGKAKEYFERAGREGGHAEAMTTMGVLRYREGRWEEAARWYEAGGEAGSEEAWRNLASMYIAGEGVAKDEGMARNIVKILLK 471 HPDA YNLG +Y + V ++ A DCF KAA E +A Y +GH+ + G E R +E +A + H A Y LA L+ NG+ +P Y+ A + +A+ L MY REG+ + N +A + +ERA GH EA+ T+G L Y +E+A ++Y+A + S AW+NLA MY AG GV +++ A +I+ +L K Sbjct: 283 HPDALYNLGMMLYDDHPTAVPTPTVANLPLAMDCFMKAA---EIGDPSAQYFMGHV---LHVGNECVPANPVSSRMLIE---QAAG-QGHGGALYYLAQLHLNGDDSMGIPIHLETALKYLHLAVDQDEGDAMVCLADMY-----------REGQPPLVSVNIPRAHKLYERAAAL-GHPEALCTLGALAYANRLYEQAFQYYQAAADRHSMAAWKNLADMYYAGVGVPQNKKTAESILDMLRK 504
BLAST of NO20G02220 vs. NCBI_GenBank
Match: XP_008870811.1 (hypothetical protein, variant, partial [Aphanomyces invadans] >ETW00676.1 hypothetical protein, variant, partial [Aphanomyces invadans]) HSP 1 Score: 83.2 bits (204), Expect = 2.400e-12 Identity = 78/244 (31.97%), Postives = 116/244 (47.54%), Query Frame = 0 Query: 234 HPDAWYNLG-RIYAEGGKGVK----RDVDRAKDCFEKAARHPEEKGGAAAYMLGHLCRGVEEGGEGGKEGGGDVRKAVEWWKEACDIKDHPAACYDLALLYRNGEGQ--VPPSYSLYRHYIAKAEGLGDAEALFHLGHMYLQGEEGGTEEGREGEWTRIEKNEGKAKEYFERAGREGGHAEAMTTMGVLRYREGRWEEAARWYEAGGEAGSEEAWRNLASMYIAGEGVAKDEGMARNIVKILLK 471 HPDA YNLG +Y + V ++ A DCF KAA E +A Y +GH+ + G E R +E +A + H A Y LA L+ NG+ +P Y+ A + +A+ L MY REG+ + N +A + +ERA GH EA+ T+G L Y +E+A ++Y+A + S AW+NLA MY AG GV +++ A +I+ +L K Sbjct: 268 HPDALYNLGMMLYDDHPTAVPTPTVANLPLAMDCFMKAA---EIGDPSAQYFMGHV---LHVGNECVPANPVSSRMLIE---QAAG-QGHGGALYYLAQLHLNGDDSMGIPIHLETALKYLHLAVDQDEGDAMVCLADMY-----------REGQPPLVSVNIPRAHKLYERAAAL-GHPEALCTLGALAYANRLYEQAFQYYQAAADRHSMAAWKNLADMYYAGVGVPQNKKTAESILDMLRK 489
BLAST of NO20G02220 vs. NCBI_GenBank
Match: XP_012205810.1 (hypothetical protein SPRG_11419 [Saprolegnia parasitica CBS 223.65] >KDO23496.1 hypothetical protein SPRG_11419 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 82.4 bits (202), Expect = 4.100e-12 Identity = 72/245 (29.39%), Postives = 110/245 (44.90%), Query Frame = 0 Query: 234 HPDAWYNLGRIYAEGGKG----VKRDVDRAKDCFEKAARHPEEKGGAAAYMLGHLCRGVEEGGEGGKEGGGDVRKAVE----WWKEACDIKDHPAACYDLALLYRNGEGQ--VPPSYSLYRHYIAKAEGLGDAEALFHLGHMYLQGEEGGTEEGREGEWTRIEKNEGKAKEYFERAGREGGHAEAMTTMGVLRYREGRWEEAARWYEAGGEAGSEEAWRNLASMYIAGEGVAKDEGMARNIVKIL 469 HPDA YNLG +Y G + D +RA F KAA E +A + +GH+ G DV A EA K H A Y LA LYR+G+ + P ++ Y+ A DA+A++ + Y G T +A E + +A + HA+A+ +G L+Y + +A ++Y+A + S AW+NLA MY G GV +++ A +I+ +L Sbjct: 164 HPDALYNLGLLYYNGSANSLPPIPADAERAMGYFMKAA---EVGDPSALFFMGHVL-----------HVGHDVVPANATSSLLMLEAAAAKGHGGARYYLAQLYRSGDESMGIAPDADVFWRYLQDAVACDDADAMYCMADAYHYGLAPLTAPDMR-----------RAIELYTQAAKL-EHADALCCLGALKYERREYTKAFQYYQAAADRHSMSAWKNLADMYYTGTGVPQNKKTAESILDML 382
BLAST of NO20G02220 vs. NCBI_GenBank
Match: OQR93592.1 (hypothetical protein ACHHYP_02443 [Achlya hypogyna]) HSP 1 Score: 80.5 bits (197), Expect = 1.600e-11 Identity = 72/242 (29.75%), Postives = 113/242 (46.69%), Query Frame = 0 Query: 234 HPDAWYNLGRIYAEGG----KGVKRDVDRAKDCFEKAARHPEEKGGAAAYMLGHLCRGVEEGGEGGKEGGGDVRKAVEWWKEACDIKDHPAACYDLALLYRNGEGQ--VPPSYSLYRHYIAKAEGLGDAEALFHLGHMYLQGEEGGTEEGREGEWTRIEKNEGK-AKEYFERAGREGGHAEAMTTMGVLRYREGRWEEAARWYEAGGEAGSEEAWRNLASMYIAGEGVAKDEGMARNIVKIL 469 HPDA YNLG +Y G + D +RA F KAA E +A + +GH+ G E + EA K H A Y LA LYR+G+ + P + Y+ +A DA+ALF + Y G ++K + + A E++ +A + HA+A+ +G L+Y + +A ++Y+A + S AW+NLA MY G GV +++ A +I+ +L Sbjct: 245 HPDALYNLGLLYYNGSAQSVPPIAADAERAMHYFMKAA---EVGDPSALFFMGHIL-------HVGHEVVPANAISSLLMLEAAVNKGHGGAGYYLAQLYRSGDESMGIAPDAHRFWSYLEQAVACEDADALFCMADAYHHG------------LPPLDKADMRLAIEHYTKAAKL-EHADALCCLGALKYESRDYTKAFQYYQAAADRHSMSAWKNLADMYYTGTGVPQNKKTAESILDML 463
BLAST of NO20G02220 vs. NCBI_GenBank
Match: XP_009826278.1 (hypothetical protein H257_03753 [Aphanomyces astaci] >ETV84586.1 hypothetical protein H257_03753 [Aphanomyces astaci]) HSP 1 Score: 76.3 bits (186), Expect = 2.900e-10 Identity = 76/244 (31.15%), Postives = 111/244 (45.49%), Query Frame = 0 Query: 234 HPDAWYNLGR-IYAEGGKGVK----RDVDRAKDCFEKAARHPEEKGGAAAYMLGHLCRGVEEGGEGGKEGGGDVRKAVEWWKEACDIKDHPAACYDLALLYRNGEG--QVPPSYSLYRHYIAKAEGLGDAEALFHLGHMYLQGEEGGTEEGREGEWTRIEKNEGKAKEYFERAGREGGHAEAMTTMGVLRYREGRWEEAARWYEAGGEAGSEEAWRNLASMYIAGEGVAKDEGMARNIVKILLK 471 HPDA YNLG +Y + V ++ A DCF KAA E +A + +GH+ + G E R + E + H A Y LA L+ +G VP Y+ A +A+AL + MY REG + + A + +ERA GH EA+ T+G L Y +E A ++Y+A + S AW+NLA MY AG GV +++ A +I+ +L K Sbjct: 274 HPDALYNLGMLLYDDHPTAVPTPTVANLPLAMDCFMKAA---EVGDPSAQFFMGHV---LHVGNESVAANPVSSRMLL----EQAATQGHGGALYYLAQLHLSGAEAMHVPVDLDKALTYLRLAVDEDEADALVCMADMY-----------REGLPPVVPVDVQAAHDLYERAAAM-GHPEALCTLGALAYANRLYEPAFQYYQAAADRHSMAAWKNLADMYYAGVGVPQNKKTAESILDMLRK 495
BLAST of NO20G02220 vs. NCBI_GenBank
Match: OQR95546.1 (hypothetical protein THRCLA_07774 [Thraustotheca clavata]) HSP 1 Score: 68.2 bits (165), Expect = 8.000e-8 Identity = 65/241 (26.97%), Postives = 104/241 (43.15%), Query Frame = 0 Query: 234 HPDAWYNLGRIYAEGGK----GVKRDVDRAKDCFEKAARHPEEKGGAAAYMLGHLCRGVEEGGEGGKEGGGDVRKAVEWWKEACDIKDHPAACYDLALLYRNGEG--QVPPSYSLYRHYIAKAEGLGDAEALFHLGHMYLQGEEGGTEEGREGEWTRIEKNEGKAKEYFERAGREGGHAEAMTTMGVLRYREGRWEEAARWYEAGGEAGSEEAWRNLASMYIAGEGVAKDEGMARNIVKIL 469 HPDA YNLG ++ EG V+ +V A F KAA E +A + +GH+ G E + EA K H ACY LA L+R+G+ ++ P+ + Y+ +A DA+AL+ + +Y G + + + G L+Y + + +A ++Y+A + S AW+NLA MY G GV +++ A +IV +L Sbjct: 246 HPDALYNLGLLHFEGNSQSVPPVEVNVKLAMQYFMKAA---EVGDPSALFFMGHIF-------HVGHELVPANAMSSLMMLEASAAKGHGGACYYLAQLHRSGDESMEIEPNADTFFKYLKQAVECEDADALYCMADLYHYG------------LPPLTSPDMRLAIEXXXXXXXXXXXXXXXXXGALKYEQRDYAKAFQYYQAAADRHSMSAWKNLADMYYTGTGVPQNKKTAESIVDML 464
BLAST of NO20G02220 vs. NCBI_GenBank
Match: CBJ48465.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 67.0 bits (162), Expect = 1.800e-7 Identity = 34/64 (53.12%), Postives = 45/64 (70.31%), Query Frame = 0 Query: 402 EGGHAEAMTTMGVLRYREGRWEEAARWYEAGGEAGSEEAWRNLASMYIAGEGVAKDEGMARNIV 466 + GHA+A +GV++Y G EEA R Y+ EAG+ AWRNLA+MY GEGVA+ E MA+NI+ Sbjct: 416 DDGHADASYCLGVMQYAMGDAEEAFRRYQTAAEAGNVLAWRNLAAMYALGEGVARSEQMAKNIL 479 The following BLAST results are available for this feature:
BLAST of NO20G02220 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 8
Relationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO20G02220 ID=NO20G02220|Name=NO20G02220|organism=Nannochloropsis oceanica|type=gene|length=2343bpback to top protein sequence of NO20G02220.1 >NO20G02220.1-protein ID=NO20G02220.1-protein|Name=NO20G02220.1|organism=Nannochloropsis oceanica|type=polypeptide|length=472bpback to top protein sequence of NO20G02220.2 >NO20G02220.2-protein ID=NO20G02220.2-protein|Name=NO20G02220.2|organism=Nannochloropsis oceanica|type=polypeptide|length=634bpback to top Synonyms
Publications
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