NO02G05990, NO02G05990 (gene) Nannochloropsis oceanica

Overview
NameNO02G05990
Unique NameNO02G05990
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1717
Alignment locationchr2:1601624..1603340 -

Link to JBrowse

Properties
Property NameValue
DescriptionLight harvesting complex protein
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr2genomechr2:1601624..1603340 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
GO:0016020membrane
GO:0009579thylakoid
GO:0009507chloroplast
Vocabulary: Biological Process
TermDefinition
GO:0009765photosynthesis, light harvesting
GO:0015979photosynthesis
GO:0006464cellular protein modification process
GO:0006091generation of precursor metabolites and energy
Vocabulary: INTERPRO
TermDefinition
IPR001344Chloro_AB-bd_pln
IPR022796Chloroa_b-bind
Vocabulary: Molecular Function
TermDefinition
GO:0005488binding
Homology
[Close]
BLAST of NO02G05990 vs. NCBI_GenBank
Match: EWM30071.1 (light harvesting complex protein [Nannochloropsis gaditana])

HSP 1 Score: 442.6 bits (1137), Expect = 7.600e-121
Identity = 218/238 (91.60%), Postives = 229/238 (96.22%), Query Frame = 0 
Query:    1 MRVLSFLAMLGTAAAFVKPTLPSAGSRTRAGALRMNLAEIELEAGKTSPFPEGFDPLGLSKDKSFKELKKWREAELKHG-------RVAMLAVLGTAVQENYHPLWGFNEKEMDGAIFHFQEIQNVYPLFWTALLFIIGVIEAKTIATGWDENMGGSTTIAGVKEDYICGNLGLDPLKIIENEDEEAFLSYRNKELNNGRLAMIAAAGITIQEKFVTNGLPEFEFHRFALSDVYNFFF 232
            MRVLSFLA++GTAAAFVKPTLP+AGSRTRAGALRMNLAEIELEAGKTSPFP+GFDPLGLSKDKSFKELKKWREAELKHG       RVAMLAVLGTAVQEN+HPLWGFNEKEMDGAIFHFQEIQNVYPLFWTALLFIIG+IEA+TI+TGWDENM GS+ IAGVKEDYICGNLGLDPLKIIEN+DEEAFLSYRNKELNNGRLAMIAAAGIT+QEKFVTNGLPEFEFHRFALSDVYNFFF
Sbjct:    1 MRVLSFLAIIGTAAAFVKPTLPAAGSRTRAGALRMNLAEIELEAGKTSPFPDGFDPLGLSKDKSFKELKKWREAELKHGMSLHPPRRVAMLAVLGTAVQENFHPLWGFNEKEMDGAIFHFQEIQNVYPLFWTALLFIIGIIEARTISTGWDENMAGSSQIAGVKEDYICGNLGLDPLKIIENDDEEAFLSYRNKELNNGRLAMIAAAGITVQEKFVTNGLPEFEFHRFALSDVYNFFF 238
[Close]
BLAST of NO02G05990 vs. NCBI_GenBank
Match: XP_005853385.1 (light harvesting complex protein [Nannochloropsis gaditana CCMP526] >EKU22975.1 light harvesting complex protein [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 384.8 bits (987), Expect = 1.900e-103
Identity = 187/208 (89.90%), Postives = 195/208 (93.75%), Query Frame = 0 
Query:   35 MNLAEIELEAGKTSPFPEGFDPLGLSKDKSFKELKKWREAELKHGRVAMLAVLGTAVQENYHPLWGFNEKEMDGAIFHFQEIQNVYPLFWTALLFIIGVIEAKTIATGWDENMGGSTTIAGVKEDYICGNLGLDPLKIIENEDEEAFLSYRNK-----------ELNNGRLAMIAAAGITIQEKFVTNGLPEFEFHRFALSDVYNFFF 232
            MNLAEIELEAGKTSPFP+GFDPLGLSKDKSFKELKKWREAELKHGRVAMLAVLGTAVQEN+HPLWGFNEKEMDGAIFHFQEIQNVYPLFWTALLFIIG+IEA+TI+TGWDENM GS+ IAGVKEDYICGNLGLDPLKIIEN+DEEAFLSYRNK           ELNNGRLAMIAAAGIT+QEKFVTNGLPEFEFHRFALSDVYNFFF
Sbjct:    1 MNLAEIELEAGKTSPFPDGFDPLGLSKDKSFKELKKWREAELKHGRVAMLAVLGTAVQENFHPLWGFNEKEMDGAIFHFQEIQNVYPLFWTALLFIIGIIEARTISTGWDENMAGSSQIAGVKEDYICGNLGLDPLKIIENDDEEAFLSYRNKSHRFLPYLIFQELNNGRLAMIAAAGITVQEKFVTNGLPEFEFHRFALSDVYNFFF 208
[Close]
BLAST of NO02G05990 vs. NCBI_GenBank
Match: XP_005855703.1 (light harvesting complex protein [Nannochloropsis gaditana CCMP526] >EKU20655.1 light harvesting complex protein [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 165.6 bits (418), Expect = 1.800e-37
Identity = 85/170 (50.00%), Postives = 117/170 (68.82%), Query Frame = 0 
Query:   42 LEAGKTSPFPEGFDPLGLSKDKSFKELKKWREAELKHGRVAMLAVLGTAVQENYHPLWGFNEKEMD--GAIFHFQEIQNVYPLFWTALLFIIGVIEAKTIATGW---DENMGGSTTIAGVKEDYICGNLGLDPLKIIENEDEEAFLSYRNKELNNGRLAMIAAAGITIQE 207
            +EAG T+PF   FDP+GLS  K+FKELKKWRE+E+KHGRVAMLAV+G  +QE + P +       D   AIFHFQE++ + P  +  L+  I ++E+ TI+ GW   +E   G  TIAG+++ Y+ G+L  DPL +    D +AF++ R+KELNNGRLAMIA AG+ +QE
Sbjct:    1 MEAGATAPF-GFFDPIGLSTGKTFKELKKWRESEVKHGRVAMLAVVGVLLQEVFAPFYNPETGSSDPGPAIFHFQELEALNPFLFVFLILGIAIVESFTISKGWESPEEMRAGGNTIAGLRDTYVAGDLEFDPLGLAPTADVDAFINQRSKELNNGRLAMIAWAGMVVQE 169
[Close]
BLAST of NO02G05990 vs. NCBI_GenBank
Match: CBJ27790.1 (Light harvesting complex protein [Ectocarpus siliculosus])

HSP 1 Score: 150.6 bits (379), Expect = 6.000e-33
Identity = 100/218 (45.87%), Postives = 127/218 (58.26%), Query Frame = 0 
Query:    8 AMLGTAAAFVKP-TLPSAGSRTRAGALRMNLAEIELEAGKTSPFPEG--FDPLGLSKDKSFKELKKWREAELKHGRVAMLAVLGTAVQENYHPLWGFNEKEMDG-AIFHFQEIQNVYPLFWTALLFIIGVIEAKTIATGWDENMGGSTTIAGVKEDYICGNLGLDPLKIIENEDEEAFLSYRNKELNNGRLAMIAAAGITIQEKFVTNG---LPEFEF 219
            A++ ++ AFV P  + SA   + A AL+M+     +     +PF +G  FDPL LS   +  ++KKWREAE+KHGRVAMLA LG  V E YHPL  F  K+  G AI HFQEI   +P FW   L  +  IE  TI T +D      T   G+KEDYI G+LG DPL  ++ + E A    + KELNNGRLAMI  AG+  QE  + NG   LP F F
Sbjct:   13 ALIASSTAFVAPVAVRSAAPASAASALKMSAGSDYVATLPGAPFSDGKIFDPLSLSDGAAPGDIKKWREAEIKHGRVAMLASLGILVAEEYHPL--FMGKDFIGPAIIHFQEISAQFPEFWAFSLLGMAFIEYNTIMTAFD-TPSAVTGEGGLKEDYIPGDLGFDPLN-LKPDGEAALDVMKTKELNNGRLAMIGIAGMLAQE--LVNGQDILPNFFF 224
[Close]
BLAST of NO02G05990 vs. NCBI_GenBank
Match: GAX28104.1 (light-harvesting complex I chlorophyll a/b binding protein 4 [Fistulifera solaris])

HSP 1 Score: 150.2 bits (378), Expect = 7.800e-33
Identity = 91/217 (41.94%), Postives = 124/217 (57.14%), Query Frame = 0 
Query:    5 SFLAMLGTAAAFVKPTLPSAGSRTRAGALRMNLAEIELE---AGKTSPFPEGFDPLGLSKDKSFKELKKWREAELKHGRVAMLAVLGTAVQE---NYHPLWGFNEKEMDGAIFHFQEIQNVYPLFWTALLFIIGVIEAKTIATGWDENMGGSTTIAG---VKEDYICGNLGLDPLKIIENEDEEAFLSYRNKELNNGRLAMIAAAGITIQEKFVTNG 213
            S LA+ G+A+AF    L    +   +G         ++     G  +PF +GFDPLGLS DK  + +K WREAEL+HGR AMLAV+G  V E     HPL+  NEK++  AI H  E++ V P F+     +IG +E     TGW  N   + T+AG   +KEDY  G++  DPL  ++ ++ E FL+   KEL NGRLAM+A AG   QE  +TNG
Sbjct:    6 SILALAGSASAFAPQKLGKTSTALNSGLNGWVPDSSKMAYGLPGAVAPFEDGFDPLGLSTDKDLETIKYWREAELQHGRTAMLAVIGFLVTEEPIEIHPLFEANEKDIGPAIRHLDEVRAVSPFFFEIFAVLIGALELNRALTGW--NSPSAKTVAGSGTLKEDYFPGDIDFDPLG-LKPKNAEEFLALNTKELQNGRLAMLAVAGFVAQE--LTNG 217
[Close]
BLAST of NO02G05990 vs. NCBI_GenBank
Match: GAX18433.1 (light-harvesting complex I chlorophyll a/b binding protein 4 [Fistulifera solaris])

HSP 1 Score: 150.2 bits (378), Expect = 7.800e-33
Identity = 91/217 (41.94%), Postives = 124/217 (57.14%), Query Frame = 0 
Query:    5 SFLAMLGTAAAFVKPTLPSAGSRTRAGALRMNLAEIELE---AGKTSPFPEGFDPLGLSKDKSFKELKKWREAELKHGRVAMLAVLGTAVQE---NYHPLWGFNEKEMDGAIFHFQEIQNVYPLFWTALLFIIGVIEAKTIATGWDENMGGSTTIAG---VKEDYICGNLGLDPLKIIENEDEEAFLSYRNKELNNGRLAMIAAAGITIQEKFVTNG 213
            S LA+ G+A+AF    L    +   +G         ++     G  +PF +GFDPLGLS DK  + +K WREAEL+HGR AMLAV+G  V E     HPL+  NEK++  AI H  E++ V P F+     +IG +E     TGW  N   + T+AG   +KEDY  G++  DPL  ++ ++ E FL+   KEL NGRLAM+A AG   QE  +TNG
Sbjct:    6 SILALAGSASAFTPQKLGKTSTALNSGLNGWVPDSSKMAYGLPGAVAPFEDGFDPLGLSTDKDLETIKYWREAELQHGRTAMLAVIGFLVTEEPIEIHPLFEANEKDIGPAIRHLDEVRAVSPFFFEIFAVLIGALELNRALTGW--NSPSAKTVAGSGTLKEDYFPGDIDFDPLG-LKPKNAEEFLALNTKELQNGRLAMLAVAGFVAQE--LTNG 217
[Close]
BLAST of NO02G05990 vs. NCBI_GenBank
Match: CBJ27787.1 (Light harvesting complex protein [Ectocarpus siliculosus])

HSP 1 Score: 148.7 bits (374), Expect = 2.300e-32
Identity = 91/205 (44.39%), Postives = 119/205 (58.05%), Query Frame = 0 
Query:    5 SFLAMLGTAAAFVKP-TLPSAGSRTRAGALRMNLAEIELEAGKTSPFPEG--FDPLGLSKDKSFKELKKWREAELKHGRVAMLAVLGTAVQENYHPLWGFNEKEMDGAIFHFQEIQNVYPLFWTALLFIIGVIEAKTIATGWDENMGGSTTIAGVKEDYICGNLGLDPLKIIENEDEEAFLSYRNKELNNGRLAMIAAAGITIQE 207
            S   ++ ++ AFV P  + SA   + + AL+M+     +     +PF +G  FDPL LS      ++KKWREAE+KHGRVAMLA LG  V E YHPL+      +  A+ HFQEI   YP FW   L  +  IE  TI T + E     T   G+KEDY+ G+LG DPL  ++ EDE A    + KELNNGRLAMI  AG+ +QE
Sbjct:   10 SAATLIASSTAFVAPMAVRSAAPASSSSALKMSAGSDYVATLPGAPFGDGKIFDPLNLSDGADPADIKKWREAEIKHGRVAMLASLGVLVAEQYHPLF-MGPDYIGPAVDHFQEISAQYPEFWVFSLLGMAFIEYNTIMTAF-ETPSAVTGEGGLKEDYVPGDLGFDPLN-LKPEDEAALDVMKTKELNNGRLAMIGIAGMLVQE 211
[Close]
BLAST of NO02G05990 vs. NCBI_GenBank
Match: CBJ27808.1 (Light harvesting complex protein [Ectocarpus siliculosus])

HSP 1 Score: 146.4 bits (368), Expect = 1.100e-31
Identity = 88/201 (43.78%), Postives = 119/201 (59.20%), Query Frame = 0 
Query:    9 MLGTAAAFVKP-TLPSAGSRTRAGALRMNLAEIELEAGKTSPFPEG--FDPLGLSKDKSFKELKKWREAELKHGRVAMLAVLGTAVQENYHPLWGFNEKEMDGAIFHFQEIQNVYPLFWTALLFIIGVIEAKTIATGWDENMGGSTTIAGVKEDYICGNLGLDPLKIIENEDEEAFLSYRNKELNNGRLAMIAAAGITIQE 207
            ++ ++ AFV P  + SA +   + +L+M+     +     +PF +G  FDPLGLS   +  ++KKWREAE+KHGRVAMLA LG  V E YHP +      +  A+ HFQEI   +P FW   L  +  IE  TI T +D      T   G+KEDYI G+LG DPL  ++ +DE A  + + KELNNGRLAMI  AG+  QE
Sbjct:   14 LIASSTAFVAPMAVRSAATTPSSSSLKMSAGSDYVATLPGAPFSDGKIFDPLGLSDGAAPGDIKKWREAEIKHGRVAMLASLGVIVAEQYHPFF-MGPDYIGPAVDHFQEISAQFPEFWAFSLLGMAFIEYNTIMTAFD-TPSAVTGEGGLKEDYIPGDLGFDPLN-LKPDDEAALDAMKTKELNNGRLAMIGIAGMLAQE 211
[Close]
BLAST of NO02G05990 vs. NCBI_GenBank
Match: CBJ27807.1 (Light harvesting complex protein [Ectocarpus siliculosus])

HSP 1 Score: 144.1 bits (362), Expect = 5.600e-31
Identity = 87/201 (43.28%), Postives = 117/201 (58.21%), Query Frame = 0 
Query:    9 MLGTAAAFVKP-TLPSAGSRTRAGALRMNLAEIELEAGKTSPFPEG--FDPLGLSKDKSFKELKKWREAELKHGRVAMLAVLGTAVQENYHPLWGFNEKEMDGAIFHFQEIQNVYPLFWTALLFIIGVIEAKTIATGWDENMGGSTTIAGVKEDYICGNLGLDPLKIIENEDEEAFLSYRNKELNNGRLAMIAAAGITIQE 207
            ++ ++ AFV P    S  +   + +L+M+     +     +PF +G  FDPLGLS   +  ++KKWREAE+KHGRVAMLA LG  V E YHP +      +  A+ HFQEI   +P FW   L  +  IE  TI T +D      T   G+KEDYI G+LG DPL  ++ +DE A  + + KELNNGRLAMI  AG+  QE
Sbjct:   14 LIASSTAFVAPMAARSVATTPSSSSLKMSAGSDYVATLPGAPFSDGKVFDPLGLSDGAAPGDIKKWREAEIKHGRVAMLASLGVIVAEQYHPFF-MGPDYIGPAVDHFQEISAQFPEFWAFSLLGMAFIEYNTIMTAFD-TPSAVTGEGGLKEDYIPGDLGFDPLN-LKPDDEAALDAMKTKELNNGRLAMIGIAGMLAQE 211
[Close]
BLAST of NO02G05990 vs. NCBI_GenBank
Match: CBJ27803.1 (Light harvesting complex protein [Ectocarpus siliculosus])

HSP 1 Score: 143.7 bits (361), Expect = 7.300e-31
Identity = 87/201 (43.28%), Postives = 117/201 (58.21%), Query Frame = 0 
Query:    9 MLGTAAAFVKP-TLPSAGSRTRAGALRMNLAEIELEAGKTSPFPEG--FDPLGLSKDKSFKELKKWREAELKHGRVAMLAVLGTAVQENYHPLWGFNEKEMDGAIFHFQEIQNVYPLFWTALLFIIGVIEAKTIATGWDENMGGSTTIAGVKEDYICGNLGLDPLKIIENEDEEAFLSYRNKELNNGRLAMIAAAGITIQE 207
            ++ ++ AFV P  + S  +   + +L+M+     +     +PF +G  FDPLGLS   +  ++KKWREAE+KHGRVAMLA LG  V E YHP +      +  A+ HFQEI   +P FW   L  +  IE  TI T +D      T   G+KEDYI G+LG DPL  ++ +DE A    + KELNNGRLAMI  AG+  QE
Sbjct:   14 LIASSTAFVAPMAVRSVATTPSSSSLKMSAGSDYVATLPGAPFSDGKIFDPLGLSDGAAPGDIKKWREAEIKHGRVAMLASLGVIVAEQYHPFF-MGPDYIGPAVDHFQEISAQFPEFWAFSLLGMAFIEYNTIMTAFD-TPSAVTGEGGLKEDYIPGDLGFDPLN-LKPDDEAALDVMKTKELNNGRLAMIGIAGMLAQE 211
The following BLAST results are available for this feature:
BLAST of NO02G05990 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM30071.17.600e-12191.60light harvesting complex protein [Nannochloropsis ... [more]
XP_005853385.11.900e-10389.90light harvesting complex protein [Nannochloropsis ... [more]
XP_005855703.11.800e-3750.00light harvesting complex protein [Nannochloropsis ... [more]
CBJ27790.16.000e-3345.87Light harvesting complex protein [Ectocarpus silic... [more]
GAX28104.17.800e-3341.94light-harvesting complex I chlorophyll a/b binding... [more]
GAX18433.17.800e-3341.94light-harvesting complex I chlorophyll a/b binding... [more]
CBJ27787.12.300e-3244.39Light harvesting complex protein [Ectocarpus silic... [more]
CBJ27808.11.100e-3143.78Light harvesting complex protein [Ectocarpus silic... [more]
CBJ27807.15.600e-3143.28Light harvesting complex protein [Ectocarpus silic... [more]
CBJ27803.17.300e-3143.28Light harvesting complex protein [Ectocarpus silic... [more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL019nonsL019Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL017nonsL017Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR032ncniR032Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR004ngnoR004Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR001ngnoR001Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK007306NSK007306Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO02G05990.1NO02G05990.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
LHCP21gene582Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO02G05990.1NO02G05990.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO02G05990 ID=NO02G05990|Name=NO02G05990|organism=Nannochloropsis oceanica|type=gene|length=1717bp
ATGCGTGTCCTCTCTTTCCTCGCCATGCTCGGCACTGCCGCCGCTTTTGT
CAAGCCCACCCTCCCTTCTGCGGGGTCCCGCACCCGTGCCGGTGCCCTCC
Ggtaagtgagtgctatgtgtgttcaggtccctgcgcttgactgcattacc
cgtgtggttgaacccaaaagacgcgacgggaaaaacgaatatcaggcctg
tacgtgtgtttgtgtacaagttgcgggcctcttcccccgcatcgcctgcc
ttcccccctgtacaccctaatcaaccttcttacagagaagttcggtcgcg
ccgtacctttgatttcccctggcattgaaaccaagttccccaaaagatcg
tcctcttccttttcctcccgtggcagattcctatacccacattcctcgct
cacaacaccaacaccaacacgaacacgacaccaccatccccatcgtacct
tgagtcatgactggaccgtgcgtttctatcacctcaccgtccctcctttc
acccctctcccccccggccccatcttttctccttctcgaacgaggcatct
gttttaccttcgctcaccctctccgcttctcccctcttttcccctctccc
tcatccatcagCATGAACTTGGCTGAGATCGAACTGGAGGCCGGCAAGAC
CTCCCCCTTCCCTGAGGGCTTTGACCCCCTTGGCCTGTCCAAAGACAAGT
CCTTCAAGGAGCTCAAGAAATGGCGCGAAGCCGAGCTCAAACACGgtacg
tcacgccttccccccccccccccttttttcattccttcttcattggtctc
accacatgctcttcttcccgtcccttcccttctcctcaaccgacagGCCG
AGTGGCCATGCTTGCCGTGCTGGGCACCGCGGTGCAGGAGAACTACCACC
CCCTGTGGGGCTTTAACGAGAAGGAGATGGACGGCGCTATCTTCCACTTC
CAGGAAATCCAAAACGTTTACCCCCTTTTCTGGACTGCCCTCCTCTTCAT
CATCGGCGTCATCGAGGCCAAGACCATCGCCACAGGGTGGGACGAGAACA
TGGGCGGCTCCgtgagtaccttccattccttcctcccttcctctccttcc
ctccctccctctctctgtcctccaaacagtcaattgttgttttcttcagt
gtatgcttttcccctttcctcccaactcactccaataaccatctcgccct
ccttctctccctcctttccctccctattcaccagACCACCATCGCCGGCG
TGAAGGAGGATTACATCTGCGGCAACCTGGGCCTTGACCCCCTCAAGATC
ATCGAGAACGAGGACGAGGAGGCCTTCCTCTCCTACCGCAACAAGgtgtg
ctttccctcccacctcctctcccgccgtctatgggcctacagcttgtcta
gatcccattctcatcctgccccctccccccttcctccctctctctttcat
gctacagGAGCTCAACAACGGCCGACTTGCCATGATCGCCGCCGCCGGCA
TCACGATCCAGgttcgtccgcccttcccttccctccctccctccctccct
cccccttcctcgcttttcccaaccatccctgccccccgctcacccccttc
ctcctctacgatttccccccctccttgctcctacagGAGAAGTTTGTGAC
CAACGGCCTCCCCGAGTTCGAATTTCACCGATTCGCCCTCTCTGATGTCT
ACAACTTCTTCTTCTAA
back to top

protein sequence of NO02G05990.1

>NO02G05990.1-protein ID=NO02G05990.1-protein|Name=NO02G05990.1|organism=Nannochloropsis oceanica|type=polypeptide|length=232bp
MRVLSFLAMLGTAAAFVKPTLPSAGSRTRAGALRMNLAEIELEAGKTSPF
PEGFDPLGLSKDKSFKELKKWREAELKHGRVAMLAVLGTAVQENYHPLWG
FNEKEMDGAIFHFQEIQNVYPLFWTALLFIIGVIEAKTIATGWDENMGGS
TTIAGVKEDYICGNLGLDPLKIIENEDEEAFLSYRNKELNNGRLAMIAAA
GITIQEKFVTNGLPEFEFHRFALSDVYNFFF*
back to top
Synonyms
Publications