NO02G05800, NO02G05800 (gene) Nannochloropsis oceanica

Overview
NameNO02G05800
Unique NameNO02G05800
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1608
Alignment locationchr2:1548363..1549970 -

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr2genomechr2:1548363..1549970 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO02G05800 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL019nonsL019Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL017nonsL017Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR032ncniR032Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR004ngnoR004Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR001ngnoR001Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO02G05800.1NO02G05800.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO02G05800.1NO02G05800.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO02G05800 ID=NO02G05800|Name=NO02G05800|organism=Nannochloropsis oceanica|type=gene|length=1608bp
ATGACCATCACTGCACCAAGACAGCCCCGGGGTTCCTTGTCCCTTACAAA
CATCTCCGTCTCAATTGCCCTGGTCATGGTCCTGACTATCCTGCAGCCCC
TTGGGACGGCCGCCTCCAAGGAAAACAAGATTTCCCCCCTCCAGCGCCTC
AAGCGCTTGACACAAGGACAAGGTGGAAGCGACACCACGGAGAATGCGGC
TGCTGTAAGCGAAAGTGGATCCCCGCTCTTCCCATGGATGACCCCCGCGG
CTGCCGGGTTCATGAACGAGGGAGGGCTACCGGATGAGGACTCCTCCCTC
GGCACGCTCTTTGCGGGTATTTTGGGGGACGAAGGCCGAGAGGACGTGGA
GGGTATTGGCTCAGAAAATGCCATGATCAGgtaggagggtggtggttaga
gagagctcgtctcggctgtcgtgttatctttttattttggcttacctttt
ccaccctcctttaccctctccctccctctccctcatctcccgcaccccca
catacagGTCCTTGATGTCCGGGTCTATGAATCAGAACTTCTTCAAGCAA
GGATTGGGCGCGCTTGGAGAgtacgtgccttgtgaattcttctcttcctc
catcccccccccccttctttctctttagctttcgcgtcctcatcctcccc
ttccccgcaacactcccctccctctttctctcagCGCCATGGCGCCTGCC
GAAGCCGACATTGTTTTCGAATATTTTCCGCCAGTGGCGCTCATGTCCTC
GTGGCAGTCTTACCTCACCAGTAAAAAAAATGGAGACGACACAGTCTCGg
tacgtctctttcccttcctttcctccctccttccattcctccctcttcct
ttcctccctcgggagtgggacatctaactcacctctgtctcccttccgtt
cgccccttcacccctcctctgcagGAGACCGAAGCCAAGCAGAGTGCAGC
AAAGGAACTGGTTGGGAAATTGGCCAAGATGGCGCTTGTGGGAGCGAACC
CCGACAAGATCATGGACATCGTCAAGGACTTCACTACCACGgtaggaagg
aaggaaggaaggaagggaggagggagggagggagggagagagagagggag
ggcccatggcaaagaaccgatagacagaagtaggctctcgaccgcctttt
ggagtggatgccttccgttggtctcaccctctcactcagtcactcgatga
aacaagaatgcttagccgtctatcttttcaccttccccctctccttcccc
tccctccctccctccacagGGCAAAACCGACGACCCAATCCTGGCCTCCC
TCGTTCAGGATATGCAAGAAACCGGCAACCCCCTGGCCATCGAAGAGATT
CAAGAGAAGTTCTTTCAGAGGGTGATGGGGGAGGAAGGCGGCGGGGGCTT
GACCCTGGCGTCGTTTTATGACACGACCTGGTTGCAGAAGGTGAGGAAGG
ACATGGCCGGCAACGAGGCATTTTGGGAGATATTGGGGGAGGAAGAGGGA
GGGTATTTTAAGAAGAAATTGATGCTAGAGGAGGAAGGCGGAGGGGGCTA
TGTGCCCTTGAAGCCGAGCGAAATGCCGGACCCGGAAACGTTGTTGGGGA
GGTGGTGA
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protein sequence of NO02G05800.1

>NO02G05800.1-protein ID=NO02G05800.1-protein|Name=NO02G05800.1|organism=Nannochloropsis oceanica|type=polypeptide|length=338bp
MTITAPRQPRGSLSLTNISVSIALVMVLTILQPLGTAASKENKISPLQRL
KRLTQGQGGSDTTENAAAVSESGSPLFPWMTPAAAGFMNEGGLPDEDSSL
GTLFAGILGDEGREDVEGIGSENAMIRSLMSGSMNQNFFKQGLGALGDAM
APAEADIVFEYFPPVALMSSWQSYLTSKKNGDDTVSETEAKQSAAKELVG
KLAKMALVGANPDKIMDIVKDFTTTGKTDDPILASLVQDMQETGNPLAIE
EIQEKFFQRVMGEEGGGGLTLASFYDTTWLQKVRKDMAGNEAFWEILGEE
EGGYFKKKLMLEEEGGGGYVPLKPSEMPDPETLLGRW*
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Synonyms
Publications