NO02G03210, NO02G03210 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO02G03210 vs. NCBI_GenBank
Match: EWM30330.1 (elongation factor p [Nannochloropsis gaditana]) HSP 1 Score: 348.2 bits (892), Expect = 2.000e-92 Identity = 173/223 (77.58%), Postives = 193/223 (86.55%), Query Frame = 0 Query: 6 LAVAVASFSVASAFFSPLPALPLVRVVQRRNNAQRQIIVALTSNDLKNGLNIELDGTPMRVVEFLHVKPGKGAAFVRSKLKNLISGTTMEKTFRAGESVEEASVIKMDMQFSYDDGEAYQFMNLETYETESVPKTAFSSNNQGSFLLEGMVVQITKWNERAIDVELPPNYIYEVVETDPNFKGNTAQGGSKPAKLNSGATVTVPMFIEVGEKIKVDTREATYV 229 L +AV S SV+S F P L + ++ +IV LTSNDLKNGL+IE+DGTPMRV+EFLHVKPGKGAAFVRSKLKNL++G+TMEKTFRAGESV+EA V+K +MQFSYDDG++YQFMNLETYETE VPKT F +NNQGSFLLEGMVVQITKWN+R ID ELPPNYIYEVVETDPNFKGNTAQG SKPAKLNSGATVTVPMFIEVGEKIKVDTREATY+ Sbjct: 8 LVIAVTSLSVSSTFLLPQTGKLLSHSTPKNGFPRKNVIVGLTSNDLKNGLSIEVDGTPMRVIEFLHVKPGKGAAFVRSKLKNLLTGSTMEKTFRAGESVDEAQVMKTEMQFSYDDGDSYQFMNLETYETEGVPKTVFETNNQGSFLLEGMVVQITKWNDRTIDAELPPNYIYEVVETDPNFKGNTAQGASKPAKLNSGATVTVPMFIEVGEKIKVDTREATYL 230
BLAST of NO02G03210 vs. NCBI_GenBank
Match: XP_005705102.1 (elongation factor EF-P [Galdieria sulphuraria] >EME28582.1 elongation factor EF-P [Galdieria sulphuraria]) HSP 1 Score: 224.9 bits (572), Expect = 2.500e-55 Identity = 109/194 (56.19%), Postives = 147/194 (75.77%), Query Frame = 0 Query: 37 NAQRQIIVALTSNDLKNGLNIELDGTPMRVVEFLHVKPGKGAAFVRSKLKNLISGTTMEKTFRAGESVEEASVIKMDMQFSYDDGEAYQFMNLETYETESVPKTAFSSNNQGSFLLEGMVVQITKWNERAIDVELPPNYIYEVVETDPNFKGNTAQGGSKPAKLNSGATVTVPMFIEVGEKIKVDTREATYVSR 231 ++ RQ+ + SND++ G I +DG+ RV+EFLHVKPGKGAAFVR+KLKNL +G+T+EKTFRAGE ++EA++ K+DMQ +Y +GE Y FMNLE+ + E + K++ SS Q +L EG V I K N R +D+E+PPN + EVV T+P KGNTAQGG+KPA L +G TV VP+F+E G+K+KVDTRE Y+SR Sbjct: 67 SSYRQVTAVINSNDIRPGTTILVDGSVHRVIEFLHVKPGKGAAFVRTKLKNLETGSTVEKTFRAGERIDEATLDKLDMQLAYIEGEQYVFMNLESLDEERISKSSLSSAAQ-KYLKEGESVSILKHNGRVLDLEIPPNVVLEVVYTEPGIKGNTAQGGTKPATLETGVTVNVPLFVETGDKVKVDTREDKYISR 259
BLAST of NO02G03210 vs. NCBI_GenBank
Match: XP_005536590.1 (chloroplast translation elongation factor P [Cyanidioschyzon merolae strain 10D] >BAM80554.1 chloroplast translation elongation factor P [Cyanidioschyzon merolae strain 10D]) HSP 1 Score: 219.5 bits (558), Expect = 1.100e-53 Identity = 114/204 (55.88%), Postives = 143/204 (70.10%), Query Frame = 0 Query: 30 RVVQRRNNAQR--QIIVALTSNDLKNGLNIELDGTPMRVVEFLHVKPGKGAAFVRSKLKNLISGTTMEKTFRAGESVEEASVIKMDMQFSYDDGEAYQFMNLETYETESVPKTAFSSNNQGSFLLEGMVVQITKWNERAIDVELPPNYIYEVVETDPNFKGNTAQGGSKPAKLNSGATVTVPMFIEVGEKIKVDTREATYVSRG 232 R V RR A+R + + SND + GL IE+DG+P +V+E LHVKPGKGAAFVR+KLKNL++G TME+TFRAGE+V EA V K + Q++Y Y FMN+ T+E E VP + +L G V +TKWN + I+VE+P EVVETDP +GNTAQGGSKPAKL +G V VP+FIEVGEKIKVDTR +Y+SRG Sbjct: 61 RGVPRRPVAERWWSPRMDVNSNDFRVGLTIEVDGSPFKVIEHLHVKPGKGAAFVRTKLKNLLTGNTMERTFRAGETVPEAQVEKFEAQYTYSAENEYVFMNMATFEEEHVPNEVV--GDTAKYLRVGQDVSVTKWNGKPIEVEVPATLTLEVVETDPGVRGNTAQGGSKPAKLETGVVVQVPLFIEVGEKIKVDTRTGSYLSRG 262
BLAST of NO02G03210 vs. NCBI_GenBank
Match: XP_005844252.1 (hypothetical protein CHLNCDRAFT_58991 [Chlorella variabilis] >EFN52150.1 hypothetical protein CHLNCDRAFT_58991 [Chlorella variabilis]) HSP 1 Score: 214.9 bits (546), Expect = 2.600e-52 Identity = 105/185 (56.76%), Postives = 136/185 (73.51%), Query Frame = 0 Query: 46 LTSNDLKNGLNIELDGTPMRVVEFLHVKPGKGAAFVRSKLKNLISGTTMEKTFRAGESVEEASVIKMDMQFSYDDGEAYQFMNLETYETESVPKTAFSSNNQGSFLLEGMVVQITKWNERAIDVELPPNYIYEVVETDPNFKGNTAQGGSKPAKLNSGATVTVPMFIEVGEKIKVDTREATYVSR 231 ++SND KNG+ IE+DG P +VVEFLHVKPGKGAAFVRSKLKN I+ T+EKT+RAGE+VE A+V K + QF+Y +G+ Y FM++ TYE +P+ + +L EGM V + WN + I VELP EVVETDP +GNTA GGSKPAKL +GA + VP+FI +G+++KVDTR TY+SR Sbjct: 920 VSSNDFKNGMTIEMDGAPYKVVEFLHVKPGKGAAFVRSKLKNFITNNTVEKTWRAGETVELAAVEKKETQFTYAEGDEYVFMDMSTYEETRIPR----DEDWAKYLKEGMDVGVLLWNGKVISVELPNTVELEVVETDPGLRGNTAAGGSKPAKLETGAVIQVPLFINLGDRLKVDTRSDTYLSR 1100
BLAST of NO02G03210 vs. NCBI_GenBank
Match: XP_015961283.1 (uncharacterized protein LOC107485285 [Arachis duranensis]) HSP 1 Score: 214.5 bits (545), Expect = 3.400e-52 Identity = 111/230 (48.26%), Postives = 155/230 (67.39%), Query Frame = 0 Query: 1 MKIPALAVAVASFSVASAFFSPLPALPLVRVVQRRNNAQRQIIVALTSNDLKNGLNIELDGTPMRVVEFLHVKPGKGAAFVRSKLKNLISGTTMEKTFRAGESVEEASVIKMDMQFSYDDGEAYQFMNLETYETESVPKTAFSSNNQGSFLLEGMVVQITKWNERAIDVELPPNYIYEVVETDPNFKGNTAQGGSKPAKLNSGATVTVPMFIEVGEKIKVDTREATYVSR 231 +K+ + +++F+ S+ FS P+L +R + + I ALTSND+K G N+E+DG P RV+EFLHVKPGKGAAFVR+KLKN ++G T+EKTFRAG S++EA+V+K QFSY DG Y FM+L T+E + ++ + +L EGM + WN + ID++LP VV+ DP KG+TAQGGSKPA L++GA V VP+F+ +GE+I VDTR Y+SR Sbjct: 9 LKLSPFSSVMSTFTSPSSSFSSNPSLLPMRTPSSSSTTRFLRIYALTSNDIKVGTNLEVDGAPWRVLEFLHVKPGKGAAFVRTKLKNYVTGNTVEKTFRAGSSIDEANVVKETKQFSYKDGSQYVFMDLNTFEESRLGESEVGDKTK--WLKEGMDCNLLFWNGKVIDLDLPITVKLTVVDVDPGLKGDTAQGGSKPATLDTGAVVNVPLFVNIGEEIMVDTRTGQYMSR 236
BLAST of NO02G03210 vs. NCBI_GenBank
Match: XP_016198612.1 (uncharacterized protein LOC107639587 [Arachis ipaensis]) HSP 1 Score: 214.2 bits (544), Expect = 4.500e-52 Identity = 111/230 (48.26%), Postives = 155/230 (67.39%), Query Frame = 0 Query: 1 MKIPALAVAVASFSVASAFFSPLPALPLVRVVQRRNNAQRQIIVALTSNDLKNGLNIELDGTPMRVVEFLHVKPGKGAAFVRSKLKNLISGTTMEKTFRAGESVEEASVIKMDMQFSYDDGEAYQFMNLETYETESVPKTAFSSNNQGSFLLEGMVVQITKWNERAIDVELPPNYIYEVVETDPNFKGNTAQGGSKPAKLNSGATVTVPMFIEVGEKIKVDTREATYVSR 231 +K+ + +++F+ S+ FS P+L +R + + I ALTSND+K G N+E+DG P RV+EFLHVKPGKGAAFVR+KLKN ++G T+EKTFRAG S++EA+V+K QFSY DG Y FM+L T+E + ++ + +L EGM + WN + ID++LP VV+ DP KG+TAQGGSKPA L++GA V VP+F+ +GE+I VDTR Y+SR Sbjct: 9 LKLSPFSSIMSTFTSPSSSFSSNPSLLPMRTPSSSSTTRFLRIYALTSNDIKVGTNLEVDGAPWRVLEFLHVKPGKGAAFVRTKLKNYVTGNTVEKTFRAGSSIDEANVVKETKQFSYKDGSQYVFMDLNTFEESRLGESEVGDKTK--WLKEGMDCNLLFWNGKVIDLDLPITVKLTVVDVDPGLKGDTAQGGSKPATLDTGAVVNVPLFVNIGEEIMVDTRTGQYMSR 236
BLAST of NO02G03210 vs. NCBI_GenBank
Match: WP_017323914.1 (elongation factor P [Synechococcus sp. PCC 7336]) HSP 1 Score: 212.2 bits (539), Expect = 1.700e-51 Identity = 104/185 (56.22%), Postives = 137/185 (74.05%), Query Frame = 0 Query: 46 LTSNDLKNGLNIELDGTPMRVVEFLHVKPGKGAAFVRSKLKNLISGTTMEKTFRAGESVEEASVIKMDMQFSYDDGEAYQFMNLETYETESVPKTAFSSNNQGSFLLEGMVVQITKWNERAIDVELPPNYIYEVVETDPNFKGNTAQGGSKPAKLNSGATVTVPMFIEVGEKIKVDTREATYVSR 231 ++SND + G +IELDG+P +V+EFLHVKPGKG+AFVR+KLKN+ +G MEKTFRAGE V +A++ K+DMQ+ Y DG+ Y FM++E+YE P T Q +L +GM V I +WNE I VELP + EVVETDP KG+TA GG+KPAKL +GA + VP+FI++GE IKVDTR +Y+ R Sbjct: 2 ISSNDFRTGTSIELDGSPWKVLEFLHVKPGKGSAFVRTKLKNMQTGNVMEKTFRAGEMVPQANLEKVDMQYLYKDGDDYVFMDMESYEQS--PLTEAQIGEQIKYLKDGMDVAILRWNELVIAVELPNTVVLEVVETDPGVKGDTATGGTKPAKLETGAEIQVPLFIKIGETIKVDTRNDSYLGR 184
BLAST of NO02G03210 vs. NCBI_GenBank
Match: WP_019493184.1 (MULTISPECIES: elongation factor P [Calothrix] >OKH55665.1 elongation factor P [Calothrix sp. HK-06]) HSP 1 Score: 209.9 bits (533), Expect = 8.400e-51 Identity = 103/185 (55.68%), Postives = 139/185 (75.14%), Query Frame = 0 Query: 46 LTSNDLKNGLNIELDGTPMRVVEFLHVKPGKGAAFVRSKLKNLISGTTMEKTFRAGESVEEASVIKMDMQFSYDDGEAYQFMNLETYETESVPKTAFSSNNQGSFLLEGMVVQITKWNERAIDVELPPNYIYEVVETDPNFKGNTAQGGSKPAKLNSGATVTVPMFIEVGEKIKVDTREATYVSR 231 ++SND + G++I LDG+ RVVEFLHVKPGKGAAFVR+KLKN SG T+E+TFRAGE+V +A++ K MQ +Y +G+ Y FM++ETYE + TA ++ +L EGM + +WNE+ +DVELP + + EV+ETDP KG+TA GGSKPAKL +GATV VP+FI GE+I++DTRE Y+ R Sbjct: 2 ISSNDFRPGVSIVLDGSVWRVVEFLHVKPGKGAAFVRTKLKNAQSGNTVERTFRAGETVPQANLEKSTMQHTYKEGDEYVFMDMETYEEGRL--TAQQIGDKVKYLKEGMEANVVRWNEQVLDVELPNSVVLEVIETDPGVKGDTATGGSKPAKLETGATVMVPLFIAQGERIRIDTREDKYLGR 184
BLAST of NO02G03210 vs. NCBI_GenBank
Match: PRW61595.1 (dihydroxy-acid dehydratase [Chlorella sorokiniana]) HSP 1 Score: 209.5 bits (532), Expect = 1.100e-50 Identity = 104/185 (56.22%), Postives = 133/185 (71.89%), Query Frame = 0 Query: 46 LTSNDLKNGLNIELDGTPMRVVEFLHVKPGKGAAFVRSKLKNLISGTTMEKTFRAGESVEEASVIKMDMQFSYDDGEAYQFMNLETYETESVPKTAFSSNNQGSFLLEGMVVQITKWNERAIDVELPPNYIYEVVETDPNFKGNTAQGGSKPAKLNSGATVTVPMFIEVGEKIKVDTREATYVSR 231 ++SND K G+ IE DG P +VVEFLHVKPGKGAAFVRSKLKN I+ T+EKT+RAGE+V+ A+V K + QF+Y +G+ Y FM++ TYE VP+ + ++ EGM V + WN + I VE P EVVETDP KGNTA GGSKPAKL +GA + VP+FI+ GE+IKVDTR +Y+SR Sbjct: 647 VSSNDFKTGMTIEFDGAPYKVVEFLHVKPGKGAAFVRSKLKNFITNNTVEKTWRAGETVDLANVEKKETQFTYAEGDEYVFMDMTTYEETRVPR----DEDWAKYMKEGMTVGVLLWNGKVISVEPPNTVELEVVETDPGVKGNTASGGSKPAKLETGAVIQVPLFIQQGERIKVDTRSDSYLSR 827
BLAST of NO02G03210 vs. NCBI_GenBank
Match: WP_011432091.1 (elongation factor P [Synechococcus sp. JA-2-3B'a(2-13)] >Q2JP65.1 RecName: Full=Elongation factor P; Short=EF-P >ABD01430.1 translation elongation factor P [Synechococcus sp. JA-2-3B'a(2-13)]) HSP 1 Score: 209.1 bits (531), Expect = 1.400e-50 Identity = 101/185 (54.59%), Postives = 138/185 (74.59%), Query Frame = 0 Query: 46 LTSNDLKNGLNIELDGTPMRVVEFLHVKPGKGAAFVRSKLKNLISGTTMEKTFRAGESVEEASVIKMDMQFSYDDGEAYQFMNLETYETESVPKTAFSSNNQGSFLLEGMVVQITKWNERAIDVELPPNYIYEVVETDPNFKGNTAQGGSKPAKLNSGATVTVPMFIEVGEKIKVDTREATYVSR 231 ++SNDL+ G+++E+DG P +V+EFLHVKPGKGAAFVR+KLKN+ +G +EKTFRAGE++ A++ K++MQ+ Y +G FM++ETY E P TA + +L E M V I +WN + IDVELP + EVVETDP KG+TA GG+KPAKL +GA + VP+FI+VGE+I+VDTR TY+ R Sbjct: 2 ISSNDLRPGVSVEIDGAPYKVIEFLHVKPGKGAAFVRTKLKNMQTGNVVEKTFRAGETLPAATIEKVEMQYLYAEGNNLVFMDMETY--EQAPITAAQIGSAVKYLKENMQVSILRWNGQVIDVELPNTVVLEVVETDPGVKGDTATGGTKPAKLETGAEIQVPLFIKVGERIRVDTRTDTYLGR 184 The following BLAST results are available for this feature:
BLAST of NO02G03210 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO02G03210 ID=NO02G03210|Name=NO02G03210|organism=Nannochloropsis oceanica|type=gene|length=4999bpback to top protein sequence of NO02G03210.1 >NO02G03210.1-protein ID=NO02G03210.1-protein|Name=NO02G03210.1|organism=Nannochloropsis oceanica|type=polypeptide|length=234bpback to top Synonyms
Publications
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