NO02G01160, NO02G01160 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO02G01160 vs. NCBI_GenBank
Match: EWM30480.1 (Rubisco LS methyltransferase, substrate-binding domain protein [Nannochloropsis gaditana]) HSP 1 Score: 748.0 bits (1930), Expect = 1.900e-212 Identity = 372/511 (72.80%), Postives = 428/511 (83.76%), Query Frame = 0 Query: 13 LLLAMAESGVQAFLGPVVAHSYTTVAAASTSPVM---------ESQDRASLAPKLFDWYSKNGIKDISKVCVGPASQQEWGMGLVATAPIKRGEQIATIPLTLCLSMDSVRLSPVGKAVGGFEPTLGEASLIALQLLYEASLGPKSKYAVYIQSLPREGQDGFDHPLFWSPAEQAILAKSSTRNLQETLIDAVAADFSWIECNILARGAVVGLGADAFDLATYEWAVAVVLSRSFFADNGLRLAPLLDMANRGEGCQNEPEVGGLGIFGGKGLKIAADRDTNKGQEIVISYGPKSGIEFLEDHGFVPPPVAGNVLVGGLCALTFELSKEEDRFFDDKEDVMSELKLPMAFSFDVRSDGDVDPEMLQFLRFLNLGGKDAFLLEAVFRNEVWSFMEAPVSEENEQKVDNMIIQACTKALADFEEAEKLSENMLKTSGVSPLTIARLESLTRVRESEKGALEATQAWANRDLMTGDLKVYYQERRLEELQLSGPLMDNELMDNAGGRRTTNLDW 515 +L A V +FL P + T +A S+ P M E+QDRA++ P+L +W +KNGIKD SK+ +GP SQ G+GLVATAPIK+GE +AT+PL LC SMDSVR SP+GK +G FEP LG+ASLIALQLLYEA +GPKSKYAVYI+SLPR GQDGFDHPLFWS AEQ +LAKSSTRNL ETLIDAVA D+ WI+ + LARG + GL AD+FDL+ +EWAVAVVLSRSFFA+NGLRLAPLLDMANRGEGC NEP++GGLGIFGGKGLK+ ADRDT+KGQEIVISYGPKSGIEFLEDHGFVPPP+ GN LVGG+C+LTF++S E DRF+DDKEDVM L LPMAFSFDVRSDGDVDPEMLQFLRFL LGGKDAFLLEAVFRNEVW FME PVSE NEQ VD +II ACT+ALA+F EAE L++ +++ GVSPLTIAR+E+L R+RESEKGAL ATQAWANRDLMT DLKVYYQERRLEELQLSGPL D+E +D +GGRRT+NLDW Sbjct: 10 VLFATLLCNVDSFLVP----APTIASACSSQPAMAAXXXXXSTETQDRAAVVPQLLEWCNKNGIKDASKITIGPVSQAGMGLGLVATAPIKQGETLATVPLNLCFSMDSVRASPLGKVIGEFEPALGDASLIALQLLYEAHMGPKSKYAVYIKSLPRPGQDGFDHPLFWSTAEQGVLAKSSTRNLGETLIDAVAEDYGWIQ-SALARGGISGLQADSFDLSDFEWAVAVVLSRSFFAENGLRLAPLLDMANRGEGCTNEPQIGGLGIFGGKGLKVIADRDTDKGQEIVISYGPKSGIEFLEDHGFVPPPLEGNALVGGMCSLTFKISPEGDRFYDDKEDVMGTLGLPMAFSFDVRSDGDVDPEMLQFLRFLKLGGKDAFLLEAVFRNEVWRFMELPVSEANEQAVDEVIIDACTQALANFAEAEVLTDELIQKEGVSPLTIARMEALARLRESEKGALVATQAWANRDLMTSDLKVYYQERRLEELQLSGPLTDDEYVDGSGGRRTSNLDW 515
BLAST of NO02G01160 vs. NCBI_GenBank
Match: XP_005855108.1 (hypothetical protein NGA_2061300, partial [Nannochloropsis gaditana CCMP526] >EKU21251.1 hypothetical protein NGA_2061300, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 633.3 bits (1632), Expect = 6.800e-178 Identity = 316/442 (71.49%), Postives = 365/442 (82.58%), Query Frame = 0 Query: 13 LLLAMAESGVQAFLGPVVAHSYTTVAAASTSPVM---------ESQDRASLAPKLFDWYSKNGIKDISKVCVGPASQQEWGMGLVATAPIKRGEQIATIPLTLCLSMDSVRLSPVGKAVGGFEPTLGEASLIALQLLYEASLGPKSKYAVYIQSLPREGQDGFDHPLFWSPAEQAILAKSSTRNLQETLIDAVAADFSWIECNILARGAVVGLGADAFDLATYEWAVAVVLSRSFFADNGLRLAPLLDMANRGEGCQNEPEVGGLGIFGGKGLKIAADRDTNKGQEIVISYGPKSGIEFLEDHGFVPPPVAGNVLVGGLCALTFELSKEEDRFFDDKEDVMSELKLPMAFSFDVRSDGDVDPEMLQFLRFLNLGGKDAFLLEAVFRNEVWSFMEAPVSEENEQKVDNMIIQACTKALADFEEAEKLSENMLKTSGVSPLTIA 446 +L A V +FL P + T +A S+ P M E+QDRA++ P+L +W +KNGIKD SK+ +GP SQ G+GLVATAPIK+GE +AT+PL LC SMDSVR SP+GK +G FEP LG+ASLIALQLLYEA +GPKSKYAVYI+SLPR GQDGFDHPLFWS AEQ +LAKSSTRNL ETLIDAVA D+ WI+ + LARG + GL AD+FDL+ +EWAVAVVLSRSFFA+NGLRLAPLLDMANRGEGC NEP++GGLGIFGGKGLK+ ADRDT+KGQEIVISYGPKSGIEFLEDHGFVPPP+ GN LVGG+C+LTF++S E DRF+DDKEDVM L LPMAFSFDVRSDGDVDPEMLQFLRFL LGGKDAFLLEAVFRNEVW FME PVSE NEQ VD +II ACT+ALA+F EAE L++ +++ GVSPLTIA Sbjct: 16 VLFATLLCNVDSFLVP----APTIASACSSQPAMAAXXXXXSTETQDRAAVVPQLLEWCNKNGIKDASKITIGPVSQAGMGLGLVATAPIKQGETLATVPLNLCFSMDSVRASPLGKVIGEFEPALGDASLIALQLLYEAHMGPKSKYAVYIKSLPRPGQDGFDHPLFWSTAEQGVLAKSSTRNLGETLIDAVAEDYGWIQ-SALARGGISGLQADSFDLSDFEWAVAVVLSRSFFAENGLRLAPLLDMANRGEGCTNEPQIGGLGIFGGKGLKVIADRDTDKGQEIVISYGPKSGIEFLEDHGFVPPPLEGNALVGGMCSLTFKISPEGDRFYDDKEDVMGTLGLPMAFSFDVRSDGDVDPEMLQFLRFLKLGGKDAFLLEAVFRNEVWRFMELPVSEANEQAVDEVIIDACTQALANFAEAEVLTDELIQKEGVSPLTIA 452
BLAST of NO02G01160 vs. NCBI_GenBank
Match: CBN77183.1 (putative ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloropl [Ectocarpus siliculosus]) HSP 1 Score: 295.8 bits (756), Expect = 2.600e-76 Identity = 177/455 (38.90%), Postives = 253/455 (55.60%), Query Frame = 0 Query: 61 WYSKNGIKDISKVCVGPASQQEWGMGLVATAPIKRGEQIATIPLTLCLSMDSVRLSPVGKAVGGFEPTLGEASLIALQLLYEASLGPKSKYAVYIQSLPREGQDGFDHPLFWSPAEQAILAKSSTRNLQETLIDAVAADFSWIECNILARGAVVGLGADAFDLATYEWAVAVVLSRSFFADNGLRLAPLLDMANRGE-GCQNEPEVGGLGIFGGKGLKIAADRDTNKGQEIVISYGPKSGIEFLEDHGFVPPPVAGNVLVGGLCALTFELSKEEDRFFDDKEDVMSELKLPMAFSFDVRSDGDVDPEMLQFLRFLNLGGKDAFLLEAVFRNEVWSFMEAPVSEENEQKVDNMIIQACTKALADFEEAEKLSENMLKTSGVSPLTIARLESLTRVRESEKGALEATQAWANRDLMTGDLKVYYQERRLEELQLSGPLMDNELMDNAGGRRTTNLDW 515 W +K+G++ + S GLVA I+ G+ + IP +L L+ ++ S + + V GFE GE LIALQ+L+E + G SK A +I LP+EG+ + PLFW A+ + SSTR + + D V DF+W+ N A+ V AD F + WAV V LSRSFF D LRL PL+D AN +EP G G+FG K + + A ++ +G+E +SYGPK +LE++GFV PPV+G+ + C L F + E+D+FFDDKED++ L + +FD+ + G D E+++FLR L + G DAFLLE +FRNEVW FM PVS NE+ V+ ++ C + L F K E ++ SG + + R VR+ E+ ALE T++W D D K YYQERRL++LQL P +E+ LDW Sbjct: 18 WLTKSGVRLTDNAVLAGRSPLAGERGLVAAKAIETGQSVLAIPQSLGLTATGLKSSGIAQYVEGFEGWTGETGLIALQVLWERAQGEGSKMAPWIAVLPKEGE--LEMPLFWGEADLTLADASSTRGISGFVAD-VDEDFAWLSENAFAKHPKV-FPADKFGPGDFRWAVGVALSRSFFVDGELRLTPLVDFANHSSLRGVSEPTGGTTGLFGSKAVVLRAGKNYEEGEEFFVSYGPKGAAGYLEENGFV-PPVSGSEVT---CELEFSI-PEDDKFFDDKEDILERAGLRTSSTFDLTAVGLPDAELVRFLRLLCVSGDDAFLLEGIFRNEVWDFMNEPVSRPNEEAVNELLATRCEEELKAFFGTAKEEEGIV--SGKAEAS-ERQRLCAGVRQGERMALEMTRSWCESDSKALDRKEYYQERRLKDLQLDLPWEVDEIYPTERRPGGGELDW 460
BLAST of NO02G01160 vs. NCBI_GenBank
Match: CEM27101.1 (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 276.6 bits (706), Expect = 1.600e-70 Identity = 164/456 (35.96%), Postives = 253/456 (55.48%), Query Frame = 0 Query: 48 SQDRASLAPKLFDWYSKNGIKDISKVCVGPASQQEWGMGLVATAPIKRGEQIATIPLTLCLSMDSVRLSPVGKAVGGFEPTLGEASLIALQLLYEASLGPKSKYAVYIQSLPREGQDGFDHPLFWSPAEQAILAKSSTRNLQETLIDAVAADFSWIECNILARGAVVGLGADAFDLATYEWAVAVVLSRSFFADNGLRLAPLLDMANRGEGCQNEPEVGGLGIFG-GKGLKIAADRDTNKGQEIVISYGP-KSGIEFLEDHGFVPPPVAGNVLVGGLCALTFELSKEEDRFFDDKEDVMSELKL-PMAFSFDVRSDGDVDPEMLQFLRFLNLGGKDAFLLEAVFRNEVWSFMEAPVSEENEQKVDNMIIQACTKALADFEEAEKLSENMLKTSGVSPLTIARLESLTRVRESEKGALEATQAWANRDLMTGDLKVYYQERRLEELQLSGPLMDNEL 501 S RA+ W + G+K S V V G+GL+ T PIKRGE A++P++L ++ +S +P+ + + G E +++AL LLYE S G S+ A ++ LP +D ++P+ WS E+A LA+S+T+ + T ++ + +F ++ ++ + V F L Y+WA+AVV SRSFF D+ LR+ PL+D N EP+ +G G +G+++ ADRD G E +SYGP +S +EFL+ GF+P + C + + +E D FFDDKED++ + ++ +D+++D D DP +LQFLR +G KDAF+LE +FR EVW M P S NE ++ C + L F ++ +L +G SP R + + RVR SEK AL++T W + + LK YYQERRL+ L L GPL D+E+ Sbjct: 72 SSSRAAALDSFKQWLANKGVKSDS-VSVDVKPSDVAGLGLICTKPIKRGEAAASVPMSLSITKESATQTPMREHLEGAMSDNSEMAMLALYLLYEKSKGDASEIAPWLAVLPT--KDELNNPILWSDGERAELARSTTKAI-STWLEERSLEFMRLQRRVMEKHPNV-FDPATFTLENYQWAMAVVTSRSFFVDSRLRMTPLVDFVNHDPAANVEPDGAPMGFLGSSRGVRLRADRDYAVGDEFRVSYGPERSAVEFLQMFGFIPEYAPSS------CEIEMSI-READSFFDDKEDILVNNEFRTLSQVWDLQADKDPDPTLLQFLRLREIGQKDAFILEPLFRGEVWYHMSLPFSPANEGDALKVLEDECVRLLTSFTSDDETDRRIL--AGSSPEASERQKLMARVRVSEKAALQSTIEWCESEALGLRLKEYYQERRLKLLNLDGPLTDDEV 513
BLAST of NO02G01160 vs. NCBI_GenBank
Match: XP_002177109.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC51572.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 231.9 bits (590), Expect = 4.500e-57 Identity = 183/532 (34.40%), Postives = 263/532 (49.44%), Query Frame = 0 Query: 1 MASIKHKLGATFLLLAMAESGVQAFLGPVVAH----SYTTVAAASTSPVMESQDRASLAPKLFDWYSKNGIKDISKVCVGPASQQEWGMGLVATAPIKRGEQIATIPLTLC--LSMDSVRLSPVGKAV--GGFEPTLGEASLIALQLLYE------ASLGPKSK---------YAVYIQSLPREGQDGFDHPLFWSPAEQAILAKSSTRNLQETLIDAVAADFSWIECNILARGA--------VVGLGADAFDLATYEWAVAVVLSRSFFADNGLRLAPLLDMANRGEGCQNEPEVGGLGIFG-GKGLKIAADRDTNKGQEIVISYGPKSGIEFLEDHGFVPPPVAGNVLVGGLCALTFELSKEEDRFFDDKEDVM-----SELKLPMAFSFDVRS----DGDVDPEMLQFLRFLNLGGKDAFLLEAVFRNEVWSFMEAPVSEENEQKVDNMIIQACTKALADFEEAEKLSENMLKTSGVSPLTIARLESLTRVRESEKGALEATQAWANRDLMTGDLKVYYQERRLEELQL 492 MAS+ A L+ V++FL P ++ +T+AA+ST+ V+ + AS K+ K + KV V P+S +GLVAT I++GE +P + LS D R + V K V + G+A LIAL +L E LG K + ++ +LP G + +HPL WS +Q IL SST + L D + D +W++ N+ + G F L ++WA+A+ SRSFF DN +RL PL+D N + E G +G FG KG ++ A + G+E+ I YGPKS ++L +H F P + L FE+ +DRF+DDK D++ + SFDV S DG+ DP M+QF+R LG DAFLLE++FR EVW FME PVSE NE+ V + I++AC AL DF + + E +++RESE AL T+ + RD DLK YYQ+RRL++L L Sbjct: 1 MASVCRLSFAIVYCLSAWSYTVESFLAPQFSNLKPLGVSTLAASSTAEVI--SNAASSLENSLAAVQKDICKTL-KVTVAPSSVNR--LGLVATEKIRKGEVFLAMPYDVRYELSADLAR-NVVFKDVLSEDYNSWTGDAGLIALLILNEVCLAADTGLGTKEPIRQNSLQAFMSAWVAALP--GPEDINHPLLWSEEDQEILQSSSTNRIYRVL-DDIEEDVTWLKTNVFEKDGNRFPVSIPWNGEEIPCFSLTGFKWAMALAQSRSFFVDNAVRLLPLMDFCNHADEGTEEARAGFMGTFGTTKGAELVAGQSYEVGEEVFICYGPKSAADYLLEHAFCPE----QSWKTAVSELFFEVD-PKDRFYDDKLDILEFETYDASPMDPVQSFDVVSAPGRDGEPDPFMVQFVRLCKLGATDAFLLESIFRKEVWGFMELPVSETNERDVVDAIMEACQLALDDFSKCAE----------------GGPEICSKLRESESQALIRTRDFLRRDREALDLKEYYQQRRLKDLGL 502
BLAST of NO02G01160 vs. NCBI_GenBank
Match: EJK44003.1 (hypothetical protein THAOC_37500 [Thalassiosira oceanica]) HSP 1 Score: 226.1 bits (575), Expect = 2.500e-55 Identity = 162/454 (35.68%), Postives = 232/454 (51.10%), Query Frame = 0 Query: 85 MGLVATAPIKRGEQIATIPLT------LCLSMDSVRLSPVGKAV-GGFEPTLGEASLIALQLLYEASL----------------GPKSKYAVYIQSLPREGQDGFDHPLFWSPAEQAILAKSSTRNLQETLIDAVAADFSWIECNILA------------RGAVVGLGADAFDLATYEWAVAVVLSRSFFADNGLRLAPLLDMANRGEGCQNEPEVGGLGIFGG--KGLKIAADRDTNKGQEIVISYGPKSGIEFLEDHGFVPPPVAGNVLVGGLCA-LTFELSKEEDRFFDDKEDVM-----SELKLPMAFSFDV----RSDGDVDPEMLQFLRFLNLGGKDAFLLEAVFRNEVWSFMEAPVSEENEQKVDNMIIQACTKALADFEEAEKLSENMLKTSGVSPLTIARLESLTRVRESEKGALEATQAWANRDLMTGDLKVYYQERRLEELQL 492 +GLVAT +G+ +A++P L L + K + G++ G+ L+A+ LL E + G ++ + +I SLP + HPL W+ EQ I+ SST+ + L+D + D SW++ N+ + R F + + +AVAVV SRSFF D LRL P +D AN + NE GG+G+ G KG+ + + + G E+ ISYGPK +++ DHGFVPP + G + A L+FE+ E DRF DDK D++ + A FDV S G+ DP M+QFLR + L GKDAFLLE++FR E+W FM PVSE+NE+ + +AC AL+D E E + S SP +L S+ VR SE+ ALE T A+ ++ DLK YYQERRL+ L L Sbjct: 128 LGLVATGSASKGDLVASLPFNEGDGSGLALEPNFAAKIVYDKVLPEGYDGWTGDVGLLAMLLLNEMARQDADSPKGVDLPRRKEGVQALMSAWIASLPSFEEMTEMHPLLWNEDEQEIMQLSSTKKIYR-LLDDIEDDSSWLDENVWSADREKFPETVKIRVGDADEERQCFTVDGFRYAVAVVRSRSFFVDGALRLLPYVDYANHDDYDSNELVGGGIGMLWGSSKGVLLKSGKALRVGDEVRISYGPKGPADYILDHGFVPPMCQLSTQGGAITAELSFEVD-ESDRFRDDKLDILEFETYDLAPMEPAQVFDVVGGPGSTGEPDPAMIQFLRLVKLAGKDAFLLESIFRKEIWGFMSEPVSEDNEKASVTAVQEACEAALSDMNELES------EDSSASPSLNEQLCSM--VRGSEREALERTLAYIKQEAEALDLKEYYQERRLKTLGL 571
BLAST of NO02G01160 vs. NCBI_GenBank
Match: GAX20562.1 ([ribulose-bisphosphate carboxylase]/[fructose-bisphosphate aldolase]-lysine N-methyltransferase [Fistulifera solaris]) HSP 1 Score: 221.5 bits (563), Expect = 6.100e-54 Identity = 156/453 (34.44%), Postives = 225/453 (49.67%), Query Frame = 0 Query: 71 SKVCVGPASQQEWGMGLVATAPIKRGEQIATIPLT-------LCLSMDSVRLSPVGKAVGGFEPTLGEASLIALQLLYEASLG---PKSKYAVYIQSLPREGQDGFDHPLFWSPAEQAILAKSSTRNLQETLIDAVAADFSWIECNIL----ARGAVVGLGADAFDLATYEWAVAVVLSRSFFADNGLRLAPLLDMANRGEGCQNEPEVGGLGIFGGKGLK---IAADRDTNKGQEIVISYGPKSGIEFLEDHGFVPPPVAGNVLVGGLCALTFELSKEEDRFFDDKEDVM-----SELKLPMAFSFDV---------RSDGDVDPEMLQFLRFLNLGGKDAFLLEAVFRNEVWSFMEAPVSEENEQKVDNMIIQACTKALADFEE-AEKLSENMLKTSGVSPLTIARLESLTRVRESEKGALEATQAWANRDLMTGDLKVYYQERRLEELQL 492 +KV +GP + +GL+AT I +G+ I ++P L++ + + F+ G+A L+A+ LL+ + P ++Q+LP ++ HP FWS A+Q +L SST + + L D + DF+W + +L R F ++WA+AV+ SRSFF D LR PLLDM N + + G FG G K + ADR+ GQE+ SYGPKS ++L +HGF P + LTFEL DRF DDK D++ + + +FDV ++DG DP M+QFLR LG DAFLLE++FR +VW FM PVSE NE V N I + C +AL +F E A+ + K ++R++E AL T A+ R+ DLK YYQERRL++L L Sbjct: 10 NKVKIGPTTTHR--LGLIATERIAKGQVILSLPCENNNDDTFPVLTVMTAKQVFQDVLPDSFDSWTGDAGLLAMLLLHHVAHDANTPMPFRTAWLQALPTM-EEMTHHPYFWSEADQEVLQMSSTNKIYQRL-DDMEEDFAWWKKQVLDVNRQRFPESVHDQPCFSWTGFQWAMAVIQSRSFFLDGALRCIPLLDMCNHDDAAEEIQTASAGGFFGSGGNKNAQLIADRNYEVGQEVFCSYGPKSAADYLLEHGFCPE----QCWKTAVSELTFELD-PNDRFRDDKLDILEFETYDQAPMDPVQTFDVVSSTSTGTTQTDGSPDPAMMQFLRLCKLGSTDAFLLESIFRKDVWGFMALPVSESNELAVVNTIAETCQRALDEFNECADDRGPEVCK----------------KLRQAETWALSKTIAFVQREKEALDLKEYYQERRLKDLGL 437
BLAST of NO02G01160 vs. NCBI_GenBank
Match: GAX10373.1 ([ribulose-bisphosphate carboxylase]/[fructose-bisphosphate aldolase]-lysine N-methyltransferase [Fistulifera solaris]) HSP 1 Score: 218.4 bits (555), Expect = 5.200e-53 Identity = 151/440 (34.32%), Postives = 219/440 (49.77%), Query Frame = 0 Query: 85 MGLVATAPIKRGEQIATIPLTLCLSMDSVRLSPVGKA--------VGGFEPTLGEASLIALQLLYEASLG---PKSKYAVYIQSLPREGQDGFDHPLFWSPAEQAILAKSSTRNLQETLIDAVAADFSWIECNIL----ARGAVVGLGADAFDLATYEWAVAVVLSRSFFADNGLRLAPLLDMANRGEGCQNEPEVGGLGIFGGKGLK---IAADRDTNKGQEIVISYGPKSGIEFLEDHGFVPPPVAGNVLVGGLCALTFELSKEEDRFFDDKEDVM-----SELKLPMAFSFDV---------RSDGDVDPEMLQFLRFLNLGGKDAFLLEAVFRNEVWSFMEAPVSEENEQKVDNMIIQACTKALADFEE-AEKLSENMLKTSGVSPLTIARLESLTRVRESEKGALEATQAWANRDLMTGDLKVYYQERRLEELQL 492 +GL+AT I +G+ I ++P C + ++ + V A F+ G+A L+A+ LL+ + P ++Q+LP G+ HP FWS A+Q IL SST + + L D + DF+W + +L R F ++WA+ ++ SRSFF D LR PLLDM N + + G FG G K + AD + GQE+ SYGPKS ++L +HGF P + LTFE+ DRF DDK D++ + + +FDV ++DG DP M+QFLR LG DAFLLE++FR ++W FM PVSE+NE V N I + C +AL +F E A+ + K ++R++E AL T A+ R+ DLK YYQERRL++L L Sbjct: 22 LGLIATEHIAKGQVILSLP---CDNDETFPVLTVTAAKQVFRDILPDSFDSWTGDAGLLAMLLLHHVAHDANTPSPLRTAWLQALPTIGEMA-HHPYFWSEADQEILQMSSTNKIYQRL-DDMEEDFAWWKKQVLDVDRQRFPETVNDQPCFSWTGFQWAMTMIQSRSFFLDGALRCIPLLDMCNHDDAAEEIQTASAGGFFGSGGNKNAQLIADHNYEVGQEVFCSYGPKSAADYLLEHGFCPE----QCWKTAVSELTFEID-PNDRFRDDKLDILEFETYDQAPMDPVQTFDVVSSTSTGTTQTDGSPDPAMMQFLRLCKLGSTDAFLLESIFRKDIWGFMALPVSEQNELAVVNAIAETCQRALDEFNECADDRGPEVCK----------------KLRQAESRALSKTIAFVQREKEALDLKEYYQERRLKDLGL 435
BLAST of NO02G01160 vs. NCBI_GenBank
Match: OEU09348.1 (large subunit of ribulose-1,5-bisphosphate carboxylase [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 213.4 bits (542), Expect = 1.700e-51 Identity = 158/498 (31.73%), Postives = 231/498 (46.39%), Query Frame = 0 Query: 35 TTVAAASTSPVMESQDRASLAPKLFDWYSKNGIKDISKVCVGPASQQEWG----MGLVATAPIKRGEQIATIPLTLCLSMDS-VRLSPVGKAV--GGFEPTLGEASLIALQLLYEASLGPKSKYAV---------------YIQSLPREGQDGFDHPLFWSPAEQAILAKSSTRNLQETLIDAVAADFSWIECNILARGAVV---------GLGADAFDLATYEWAVAVVLSRSFFADNGLRLAPLLDMANRGEGCQNEPEVGGLGIFG-GKGLKIAADRDTNKGQEIVISYGPKSGIEFLEDHGFVPPPVAGNVLVGGLCALTFELSKEEDRFFDDKEDVM-----SELKLPMAFSFDVRS----DGDVDPEMLQFLRFLNLGGKDAFLLEAVFRNEVWSFMEAPVSEENEQKVDNMIIQACTKALADFEEAEKLSENMLKTSGVSPLTIARLESLTRVRESEKGALEATQAWANRDLMTGDLKVYYQERRLEELQL 492 T+ +STS E+Q + F+ +N K+I++ C G +G +AT IK+GE IA +P + S + K V +E G+ L+AL LL E + K + +I+SLP + DHPLFW +Q +L SS + L D + D W+ NI + G+ F + Y+W +A+ SRSFF D R+ P +D N + E G +G FG KG ++ A+ +G+E+ +SYGPKS ++L +HGF P + + +T E+ EDRF+DDK D++ + + SFDV S DG+ DP LQF+R L DAF+LE++FR EVW FM PVSE NE V I C +L D + + E T++RESE A++ T + R+ DLK YYQERRL++L L Sbjct: 77 TSETTSSTSIEEETQQHLEEISRNFNNAFENCRKEITRTCNVKMGLSPTGGSMRLGWIATKDIKKGEIIANMPYDELWEISSKTARKTIFKDVLDDKYEGWTGDTGLVALSLLNEIARSSKGTAGIEKPERPPQIQSFIEEWIRSLPTPTEMKIDHPLFWPEEDQEVLQLSSNTKIYRVL-DDIEEDAKWLVENIFEKDRETFPEKVQLSSGIDVPCFSVEGYKWVMALTQSRSFFVDGKSRIMPFMDGGNHDDDAM-EIRPGYMGTFGTTKGAEVIANTKYKEGEEVFLSYGPKSAADYLLEHGFCP----RSSFKTAVSEVTIEID-SEDRFYDDKLDILEFETYDQAPMDPTQSFDVVSAIGRDGEPDPAFLQFVRLKKLNSMDAFMLESIFRKEVWGFMALPVSESNELAVVETISDICESSLEDLNQCPE----------------GGPEICTQLRESETKAIKRTLEFMLREKQALDLKEYYQERRLKDLGL 551
BLAST of NO02G01160 vs. NCBI_GenBank
Match: XP_002290566.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED92318.1 predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 193.7 bits (491), Expect = 1.400e-45 Identity = 162/490 (33.06%), Postives = 228/490 (46.53%), Query Frame = 0 Query: 85 MGLVATAPIKRGEQ-IATIPLTLCLSMDSVRLSP--VGKAV------GGFEPTLGEASLIALQLLYEASL-------------------GPKSKYAVYIQSLPREGQDGFDHPLFWSPAEQAILAKSSTRNLQETLIDAVAADFSWIECNI-------LARGAVVGLGAD-----AFDLATYEWAVAVVLSRSFFADNGLRLAPLLDMANRGEGCQNEPEVGGLGIFGG--KGLKIAADRDTNKGQEIVISYGPKSGIEFLEDHGFVPPPVAGNVLVGGLCALTFELSKE---EDRFFDDKEDVMSELKLPMA-----FSFDVR----SDGDVDPEMLQFLRFLNLGGKDAFLLEAVFRNEVWSFMEAPVSEENEQKVDNMIIQACTKALADFE-----EAEKLSENMLKTSGVSPLTIARLESLTRVRESEKGALEATQAWANRDLMTGDLKVYYQERRLEELQLSGPLM-DNELMDNAGGRRTTNLDW 515 +GL+AT + + +Q IA++P + L+P K V G++ G+ L+A+ +L E + G +S + ++ SLP + HPL W+ SW++ + + +G + F + +AV++V SRSFF D LRL P LD AN + E GG+G G KG + + + G EI ISYGPK ++L DHGFVPP GG A+T ELS E DRF DDK DV+ +A FDV S G+ DP M+QFLR +NLGGKDAFLLE++FR E+W FM PVSE NE+ +++AC KAL++ E + LSE M RL ++ VRESE+ ALE T + ++ DLK YYQERRL+ L L +N+ + AG R D+ Sbjct: 122 LGLIATESVSKDDQTIASLPF-FDTDGSGLALAPHIATKVVYKDALPEGYDGWTGDVGLLAMLVLNEMARLNVDGGSDNKGIDLPTRKEGIQSLMSAWVASLPSPVEMEGMHPLMWNEXXXXXXXXXXXXXXXXXXXXXXXXS-SWLDEKVWSLDRSTFPESVKIQVGDEVEERPCFSQEGFRYAVSLVRSRSFFVDGSLRLLPYLDFANHDDFDSLELVGGGIGTLWGSAKGALMKSGKALEVGDEIRISYGPKGPADYLLDHGFVPPMCQTTSGTGG--AITAELSFEIDDSDRFRDDKLDVLEYETYDLAPMEPLQVFDVTGGPGSTGEPDPAMIQFLRLINLGGKDAFLLESIFRKEIWGFMSEPVSEANERLAVMAVVEACEKALSEMEGPVGGDITSLSEKM------------RLCNM--VRESERQALERTLIYVKQEAEALDLKEYYQERRLKSLGLDSEWSPENDDVGWAGNRVPGGADY 593 The following BLAST results are available for this feature:
BLAST of NO02G01160 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO02G01160 ID=NO02G01160|Name=NO02G01160|organism=Nannochloropsis oceanica|type=gene|length=1874bpback to top protein sequence of NO02G01160.1 >NO02G01160.1-protein ID=NO02G01160.1-protein|Name=NO02G01160.1|organism=Nannochloropsis oceanica|type=polypeptide|length=515bpback to top Synonyms
Publications
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