NO02G00190.1, NO02G00190.1 (mRNA) Nannochloropsis oceanica

Overview
NameNO02G00190.1
Unique NameNO02G00190.1
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1979
Alignment locationchr2:76744..79089 -

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Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr2genomechr2:76744..79089 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO02G00190.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO02G00190NO02G00190Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO02G00190.1NO02G00190.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO02G00190.1.cds1NO02G00190.1.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO02G00190.1.cds2NO02G00190.1.cds2Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO02G00190.1.cds3NO02G00190.1.cds3Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO02G00190.1 ID=NO02G00190.1|Name=NO02G00190.1|organism=Nannochloropsis oceanica|type=mRNA|length=1979bp
CGTCCTCTTCTAGTAGACTCTGTTTCTTCTTGGCCGCAGCAGCAGCGCTC
GCTCCTCCCCTTCTCCGCATCAAACGCGAGAGGAAGGGGCTCGCTCCCTC
CCCCTTGCGCGTTATGAAGGTCAGCGTGGTAGTAGGTGCTCTCTTAAAGC
CATCTCTTCTCCTCGTCGTGACCCTTTTCGTAGTACTTGTCGCTGTGACG
ACGCTGTGGCTGTATGCAGAGTTGGTGGTGGCTGGAAGGAGGAGAAGCAG
GATGATGGGCACCAGGCTACAGAGGAGGCGTCTCGATCCTCCTGCTGTTC
GTGCTGCGGGCGCTGTCATGGCACCCTTGGTCGATTGGCAGGACGTACAG
CGAGACTGGAAGGTGGATAGTGTGCCTGGTGTTGTGAGTAGGGCGTATGG
TCAATCAGACGGTGATTAAGGCATGTGTAGGGCCTGTCCTCAATGCATGT
GAGGTTGAGGGGCGTCCTCGATCGGCAGACAGCACCAAGCAACGGCTGGC
TTCATTCGCATCTGCGGCAGCACCTGCTCTGTGCGCATTTGCTTTACGCC
CGGCGCCACACACTTTCCTTCTCACGAATTCTGCATGTACTAATCGTTGT
CATCACTCTCTTCCTGTCCACGTCCCCTCACCACGTCGCAACCCATAGGG
CAAGTCTGCCTCGCCTCCCCCACCAAAGCACCCCCGTCTCCACTTTACTT
CCCCGGCAAGCAGGCATGTACGCCTCGGGCATGGTATTCGCGGGCGTCAA
TGGCGGATCGGGCAGTGCCTGGCCATCCGGGGCTACATCGGACGCGTGGG
ATGACAGTGCCATCCTAAAGGCATTCGATCAGGCCGTCTCCAGCCATGGG
CCAGTCGGAGGACGGCAAAGAGACAAACGACCGCGGCAGCAGCTGTCCAC
GGAAGGAAGGGGAGAAGGAGGAGTAGCGGGCATGCAGCAGGGGGCACAAC
AGCCAAAGCGGCGCTTCTCACACACCATGTCCCAAAGAAGAGGAGGAGGG
GGAGGAGGGGGAGGAGGGGGAGGAGGAGTGTCGTCGGTAGAGGATCATTT
TTTCAGTCTGCTGCAGGCCGGAGAGGAGAGGAAACGTAACGAGGCCTGGG
GAGGGCAGAAGGATGATAGACAGAATGTGAAGGGGGAGGAGAAGGAGGAG
GAGAGAGAGGAGGGACAGCTTTCTCCTTACAGCGCACAGCATCTGGGCGG
AGGCGGGGAGAAGGAGGAGGAGGAGGAGGAAGAAGAAGAAGGAGAGGTGC
ACGAGCGAAACGGAATGCCAGGACCCAAGCAGCAGCCGCAGCAACAGTAT
CAATACAAACAGCAGGAAGGAAGACAAAACGGAGCATATCCGTATTCCTC
TTACCCTCCCCCTTCTTCCGTCCCTCCTCCTCCATCATCATCACGGCCTT
CCACCTGCTCGCCCCATCCCCTTCGCAGCTCTTCTCCCTATGCCCATGTG
GCAGTGGCAGGAGGAGACGACACCCTTCCTCCCTCCTTCCCTCACCCGTC
TCCTGCACACCAGGACCTAGTGACCATGCACGGGCAGCTGCTTCGAGGGA
TGCTGAGAGGGAGGGAGGGAGGGAGGGAGGAAGGGAAGGAGGGAGAGGAG
GAGGACGTGGAAGAGGCGGCGGCATTGTCGGATTTGATGGCAGCGTGGTA
TCACAGCGGGTATTACACGGGCCGGTATCGGGCGATACAGGAGATGAAGA
AACAGCAGCGACAGCAGCACCAGGAGCACCAGCAGCCATCCTGGCGTCCT
TTGCATTAGCCTCACTTGAGCACAGGGGCTTGCAACAGGCGCGAGGGCAA
AACACGGCCATCCCCGATCCCTGGAGGGAAGGAGGAACAACACGACAGCC
CACAAGCGGAGAGGGAGGAGGGACAGGTGTAACAGGTGCTCTGCTCGTCT
TTTGAGCGGCAAGGGGGCAAAGATTTTTGAGGGGTTTGGGCTTTTTGAGG
AATTGAGTGGTGAACGGAGCCTTTAATGG
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protein sequence of NO02G00190.1

>NO02G00190.1-protein ID=NO02G00190.1-protein|Name=NO02G00190.1|organism=Nannochloropsis oceanica|type=polypeptide|length=439bp
MHVRLRGVLDRQTAPSNGWLHSHLRQHLLCAHLLYARRHTLSFSRILHVL
IVVITLFLSTSPHHVATHRASLPRLPHQSTPVSTLLPRQAGMYASGMVFA
GVNGGSGSAWPSGATSDAWDDSAILKAFDQAVSSHGPVGGRQRDKRPRQQ
LSTEGRGEGGVAGMQQGAQQPKRRFSHTMSQRRGGGGGGGGGGGGVSSVE
DHFFSLLQAGEERKRNEAWGGQKDDRQNVKGEEKEEEREEGQLSPYSAQH
LGGGGEKEEEEEEEEEGEVHERNGMPGPKQQPQQQYQYKQQEGRQNGAYP
YSSYPPPSSVPPPPSSSRPSTCSPHPLRSSSPYAHVAVAGGDDTLPPSFP
HPSPAHQDLVTMHGQLLRGMLRGREGGREEGKEGEEEDVEEAAALSDLMA
AWYHSGYYTGRYRAIQEMKKQQRQQHQEHQQPSWRPLH*
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mRNA from alignment at chr2:76744..79089-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO02G00190.1 ID=NO02G00190.1|Name=NO02G00190.1|organism=Nannochloropsis oceanica|type=mRNA|length=2346bp|location=Sequence derived from alignment at chr2:76744..79089- (Nannochloropsis oceanica)
CGTCCTCTTCTAGTAGACTCTGTTTCTTCTTGGCCGCAGCAGCAGCGCTC
GCTCCTCCCCTTCTCCGCATCAAACGCGAGAGGAAGGGGCTCGCTCCCTC
CCCCTTGCGCGTTATGAAGGTCAGCGTGGTAGTAGGTGCTCTCTTAAAGC
CATCTCTTCTCCTCGTCGTGACCCTTTTCGTAGTACTTGTCGCTGTGACG
ACGCTGTGGCTGTATGCAGAGTTGGTGGTGGCTGGAAGGAGGAGAAGCAG
GATGATGGGCACCAGGCTACAGAGGAGGCGTCTCGATCCTCCTGCTGTTC
GTGCTGCGGGCGCTGTCATGGCACCCTTGGTCGATTGGCAGGACGTACAG
CGAGACTGGAAGGTGGATAGTGTGCCTGGTGTTGTGAGTAGGGCGTATGG
TCAATCAGACGGTGATTAAGGCATGTGTAGGGCCTGTCCTCAATGCATGT
GAGGTTGAGGGGCGTCCTCGATCGGCAGACAGCACCAAGCAACGGCTGGC
TTCATTCGCATCTGCGGCAGCACCTGCTCTGTGCGCATTTGCTTTACGCC
CGGCGCCACACACTTTCCTTCTCACGAATTCTGCATGTACTAATCGTTGT
CATCACTCTCTTCCTGTCCACGTCCCCTCACCACGTCGCAACCCATAGGG
CAAGTCTGCCTCGCCTCCCCCACCAAAGCACCCCCGTCTCCACTTTACTT
CCCCGGCAAGCAGGCATGTACGCCTCGGGCATGGTATTCGCGGGCGTCAA
TGGCGGATCGGGCAGTGCCTGGCCATCCGGGGCTACATCGGACGCGTGGG
ATGACAGTGCCATCCTAAAGGTATGTCGGGTTGGAAGGAGGGACGACGAG
AGGAGGGGAGGTCGACAGGGAGGACCTTCCACTTCACTATTCGCACGTGC
TGGTCCTTGAAGAGGGAGGACAGTGCTGCTTTTAACGTCAAGAGAAGAAA
AGTGATGAGGTCAAGTTTTGAACGGAAAAGAGCCGCCCTCAAGAGTGTCA
CCTCTGCACGCATCCACCCACCCTCACAGGCATTCGATCAGGCCGTCTCC
AGCCATGGGCCAGTCGGAGGACGGCAAAGAGACAAACGACCGCGGCAGCA
GCTGTCCACGGAAGGAAGGGGAGAAGGAGGAGTAGCGGGCATGCAGCAGG
GGGCACAACAGCCAAAGCGGCGCTTCTCACACACCATGTCCCAAAGAAGA
GGAGGAGGGGGAGGAGGGGGAGGAGGGGGAGGAGGAGTGTCGTCGGTAGA
GGATCATTTTTTCAGTCTGCTGCAGGCCGGAGAGGAGAGGAAACGTAACG
AGGCCTGGGGAGGGCAGAAGGATGATAGACAGAATGTGAAGGGGGAGGAG
AAGGAGGAGGAGAGAGAGGAGGGACAGCTTTCTCCTTACAGCGCACAGCA
TCTGGGCGGAGGCGGGGAGAAGGAGGAGGAGGAGGAGGAAGAAGAAGAAG
GAGAGGTGCACGAGCGAAACGGAATGCCAGGACCCAAGCAGCAGCCGCAG
CAACAGTATCAATACAAACAGCAGGAAGGAAGACAAAACGGAGCATATCC
GTATTCCTCTTACCCTCCCCCTTCTTCCGTCCCTCCTCCTCCATCATCAT
CACGGCCTTCCACCTGCTCGCCCCATCCCCTTCGCAGCTCTTCTCCCTAT
GCCCATGTGGCAGTGGCAGGAGGAGACGACACCCTTCCTCCCTCCTTCCC
TCACCCGTCTCCTGCACACCAGGACCTAGTGACCATGCACGGGCAGCTGC
TTCGAGGGATGCTGAGAGGGAGGGAGGGAGGGAGGGAGGAAGGGAAGGAG
GGAGAGGAGGAGGACGTGGAAGAGGCGGCGGCATTGTCGGATTTGATGGC
AGCGTGGTATCACAGGTGAGGACGGGAGAGGAAGGGAGTTGAAGAGGAGG
GAGGGAGGGAGGGAGGGAGGGAGAGAGAGAGAAAGGGGGGAGGGAGGGAG
GACAGGAAGAAATCTTCTGATCGATTCCATGTATTAAGTTACAGCTCCTT
CTTTTTCCCTTGTCCCTCTCTAGCGGGTATTACACGGGCCGGTATCGGGC
GATACAGGAGATGAAGAAACAGCAGCGACAGCAGCACCAGGAGCACCAGC
AGCCATCCTGGCGTCCTTTGCATTAGCCTCACTTGAGCACAGGGGCTTGC
AACAGGCGCGAGGGCAAAACACGGCCATCCCCGATCCCTGGAGGGAAGGA
GGAACAACACGACAGCCCACAAGCGGAGAGGGAGGAGGGACAGGTGTAAC
AGGTGCTCTGCTCGTCTTTTGAGCGGCAAGGGGGCAAAGATTTTTGAGGG
GTTTGGGCTTTTTGAGGAATTGAGTGGTGAACGGAGCCTTTAATGG
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Coding sequence (CDS) from alignment at chr2:76744..79089-

>NO02G00190.1 ID=NO02G00190.1|Name=NO02G00190.1|organism=Nannochloropsis oceanica|type=CDS|length=1317bp|location=Sequence derived from alignment at chr2:76744..79089- (Nannochloropsis oceanica)
ATGCATGTGAGGTTGAGGGGCGTCCTCGATCGGCAGACAGCACCAAGCAA
CGGCTGGCTTCATTCGCATCTGCGGCAGCACCTGCTCTGTGCGCATTTGC
TTTACGCCCGGCGCCACACACTTTCCTTCTCACGAATTCTGCATGTACTA
ATCGTTGTCATCACTCTCTTCCTGTCCACGTCCCCTCACCACGTCGCAAC
CCATAGGGCAAGTCTGCCTCGCCTCCCCCACCAAAGCACCCCCGTCTCCA
CTTTACTTCCCCGGCAAGCAGGCATGTACGCCTCGGGCATGGTATTCGCG
GGCGTCAATGGCGGATCGGGCAGTGCCTGGCCATCCGGGGCTACATCGGA
CGCGTGGGATGACAGTGCCATCCTAAAGGCATTCGATCAGGCCGTCTCCA
GCCATGGGCCAGTCGGAGGACGGCAAAGAGACAAACGACCGCGGCAGCAG
CTGTCCACGGAAGGAAGGGGAGAAGGAGGAGTAGCGGGCATGCAGCAGGG
GGCACAACAGCCAAAGCGGCGCTTCTCACACACCATGTCCCAAAGAAGAG
GAGGAGGGGGAGGAGGGGGAGGAGGGGGAGGAGGAGTGTCGTCGGTAGAG
GATCATTTTTTCAGTCTGCTGCAGGCCGGAGAGGAGAGGAAACGTAACGA
GGCCTGGGGAGGGCAGAAGGATGATAGACAGAATGTGAAGGGGGAGGAGA
AGGAGGAGGAGAGAGAGGAGGGACAGCTTTCTCCTTACAGCGCACAGCAT
CTGGGCGGAGGCGGGGAGAAGGAGGAGGAGGAGGAGGAAGAAGAAGAAGG
AGAGGTGCACGAGCGAAACGGAATGCCAGGACCCAAGCAGCAGCCGCAGC
AACAGTATCAATACAAACAGCAGGAAGGAAGACAAAACGGAGCATATCCG
TATTCCTCTTACCCTCCCCCTTCTTCCGTCCCTCCTCCTCCATCATCATC
ACGGCCTTCCACCTGCTCGCCCCATCCCCTTCGCAGCTCTTCTCCCTATG
CCCATGTGGCAGTGGCAGGAGGAGACGACACCCTTCCTCCCTCCTTCCCT
CACCCGTCTCCTGCACACCAGGACCTAGTGACCATGCACGGGCAGCTGCT
TCGAGGGATGCTGAGAGGGAGGGAGGGAGGGAGGGAGGAAGGGAAGGAGG
GAGAGGAGGAGGACGTGGAAGAGGCGGCGGCATTGTCGGATTTGATGGCA
GCGTGGTATCACAGCGGGTATTACACGGGCCGGTATCGGGCGATACAGGA
GATGAAGAAACAGCAGCGACAGCAGCACCAGGAGCACCAGCAGCCATCCT
GGCGTCCTTTGCATTAG
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Synonyms
Publications