NO02G00190, NO02G00190 (gene) Nannochloropsis oceanica

Overview
NameNO02G00190
Unique NameNO02G00190
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2346
Alignment locationchr2:76744..79089 -

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr2genomechr2:76744..79089 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO02G00190 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL016nonsL016Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR068ncniR068Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR000ngnoR000Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO02G00190.2NO02G00190.2-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO02G00190.1NO02G00190.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|674602gene_10178Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100786g1gene23Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO02G00190.2NO02G00190.2Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO02G00190.1NO02G00190.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO02G00190 ID=NO02G00190|Name=NO02G00190|organism=Nannochloropsis oceanica|type=gene|length=2346bp
CGTCCTCTTCTAGTAGACTCTGTTTCTTCTTGGCCGCAGCAGCAGCGCTC
GCTCCTCCCCTTCTCCGCATCAAACGCGAGAGGAAGGGGCTCGCTCCCTC
CCCCTTGCGCGTTATGAAGGTCAGCGTGGTAGTAGGTGCTCTCTTAAAGC
CATCTCTTCTCCTCGTCGTGACCCTTTTCGTAGTACTTGTCGCTGTGACG
ACGCTGTGGCTGTATGCAGAGTTGGTGGTGGCTGGAAGGAGGAGAAGCAG
GATGATGGGCACCAGGCTACAGAGGAGGCGTCTCGATCCTCCTGCTGTTC
GTGCTGCGGGCGCTGTCATGGCACCCTTGGTCGATTGGCAGGACGTACAG
CGAGACTGGAAGGTGGATAGTGTGCCTGGTGTTGTGAGTAGGGCGTATGG
TCAATCAGACGGTGATTAAGGCATGTGTAGGGCCTGTCCTCAATGCATGT
GAGGTTGAGGGGCGTCCTCGATCGGCAGACAGCACCAAGCAACGGCTGGC
TTCATTCGCATCTGCGGCAGCACCTGCTCTGTGCGCATTTGCTTTACGCC
CGGCGCCACACACTTTCCTTCTCACGAATTCTGCATGTACTAATCGTTGT
CATCACTCTCTTCCTGTCCACGTCCCCTCACCACGTCGCAACCCATAGGG
CAAGTCTGCCTCGCCTCCCCCACCAAAGCACCCCCGTCTCCACTTTACTT
CCCCGGCAAGCAGGCATGTACGCCTCGGGCATGGTATTCGCGGGCGTCAA
TGGCGGATCGGGCAGTGCCTGGCCATCCGGGGCTACATCGGACGCGTGGG
ATGACAGTGCCATCCTAAAGGTATGTCGGGTTGGAAGGAGGGACGACGAG
AGGAGGGGAGGTCGACAGGGAGGACCTTCCACTTCACTATTCGCACGTGC
TGGTCCTTGAAGAGGGAGGACAGTGCTGCTTTTAACGTCAAGAGAAGAAA
AGTGATGAGGTCAAGTTTTGAACGGAAAAGAGCCGCCCTCAAGAGTGTCA
CCTCTGCACGCATCCACCCACCCTCACAGGCATTCGATCAGGCCGTCTCC
AGCCATGGGCCAGTCGGAGGACGGCAAAGAGACAAACGACCGCGGCAGCA
GCTGTCCACGGAAGGAAGGGGAGAAGGAGGAGTAGCGGGCATGCAGCAGG
GGGCACAACAGCCAAAGCGGCGCTTCTCACACACCATGTCCCAAAGAAGA
GGAGGAGGGGGAGGAGGGGGAGGAGGGGGAGGAGGAGTGTCGTCGGTAGA
GGATCATTTTTTCAGTCTGCTGCAGGCCGGAGAGGAGAGGAAACGTAACG
AGGCCTGGGGAGGGCAGAAGGATGATAGACAGAATGTGAAGGGGGAGGAG
AAGGAGGAGGAGAGAGAGGAGGGACAGCTTTCTCCTTACAGCGCACAGCA
TCTGGGCGGAGGCGGGGAGAAGGAGGAGGAGGAGGAGGAAGAAGAAGAAG
GAGAGGTGCACGAGCGAAACGGAATGCCAGGACCCAAGCAGCAGCCGCAG
CAACAGTATCAATACAAACAGCAGGAAGGAAGACAAAACGGAGCATATCC
GTATTCCTCTTACCCTCCCCCTTCTTCCGTCCCTCCTCCTCCATCATCAT
CACGGCCTTCCACCTGCTCGCCCCATCCCCTTCGCAGCTCTTCTCCCTAT
GCCCATGTGGCAGTGGCAGGAGGAGACGACACCCTTCCTCCCTCCTTCCC
TCACCCGTCTCCTGCACACCAGGACCTAGTGACCATGCACGGGCAGCTGC
TTCGAGGGATGCTGAGAGGGAGGGAGGGAGGGAGGGAGGAAGGGAAGGAG
GGAGAGGAGGAGGACGTGGAAGAGGCGGCGGCATTGTCGGATTTGATGGC
AGCGTGGTATCACAGgtgaggacgggagaggaagggagttgaagaggagg
gagggagggagggagggagggagagagagagaaaggggggagggagggag
gacaggaagaaatcttctgatcgattccatgtattaagttacagctcctt
ctttttcccttgtccctctctagCGGGTATTACACGGGCCGGTATCGGGC
GATACAGGAGATGAAGAAACAGCAGCGACAGCAGCACCAGGAGCACCAGC
AGCCATCCTGGCGTCCTTTGCATTAGCCTCACTTGAGCACAGGGGCTTGC
AACAGGCGCGAGGGCAAAACACGGCCATCCCCGATCCCTGGAGGGAAGGA
GGAACAACACGACAGCCCACAAGCGGAGAGGGAGGAGGGACAGGTGTAAC
AGGTGCTCTGCTCGTCTTTTGAGCGGCAAGGGGGCAAAGATTTTTGAGGG
GTTTGGGCTTTTTGAGGAATTGAGTGGTGAACGGAGCCTTTAATGG
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protein sequence of NO02G00190.2

>NO02G00190.2-protein ID=NO02G00190.2-protein|Name=NO02G00190.2|organism=Nannochloropsis oceanica|type=polypeptide|length=382bp
MSGWKEGRREEGRSTGRTFHFTIRTCWSLKREDSAAFNVKRRKVMRSSFE
RKRAALKSVTSARIHPPSQAFDQAVSSHGPVGGRQRDKRPRQQLSTEGRG
EGGVAGMQQGAQQPKRRFSHTMSQRRGGGGGGGGGGGGVSSVEDHFFSLL
QAGEERKRNEAWGGQKDDRQNVKGEEKEEEREEGQLSPYSAQHLGGGGEK
EEEEEEEEEGEVHERNGMPGPKQQPQQQYQYKQQEGRQNGAYPYSSYPPP
SSVPPPPSSSRPSTCSPHPLRSSSPYAHVAVAGGDDTLPPSFPHPSPAHQ
DLVTMHGQLLRGMLRGREGGREEGKEGEEEDVEEAAALSDLMAAWYHSGY
YTGRYRAIQEMKKQQRQQHQEHQQPSWRPLH*
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protein sequence of NO02G00190.1

>NO02G00190.1-protein ID=NO02G00190.1-protein|Name=NO02G00190.1|organism=Nannochloropsis oceanica|type=polypeptide|length=439bp
MHVRLRGVLDRQTAPSNGWLHSHLRQHLLCAHLLYARRHTLSFSRILHVL
IVVITLFLSTSPHHVATHRASLPRLPHQSTPVSTLLPRQAGMYASGMVFA
GVNGGSGSAWPSGATSDAWDDSAILKAFDQAVSSHGPVGGRQRDKRPRQQ
LSTEGRGEGGVAGMQQGAQQPKRRFSHTMSQRRGGGGGGGGGGGGVSSVE
DHFFSLLQAGEERKRNEAWGGQKDDRQNVKGEEKEEEREEGQLSPYSAQH
LGGGGEKEEEEEEEEEGEVHERNGMPGPKQQPQQQYQYKQQEGRQNGAYP
YSSYPPPSSVPPPPSSSRPSTCSPHPLRSSSPYAHVAVAGGDDTLPPSFP
HPSPAHQDLVTMHGQLLRGMLRGREGGREEGKEGEEEDVEEAAALSDLMA
AWYHSGYYTGRYRAIQEMKKQQRQQHQEHQQPSWRPLH*
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Synonyms
Publications