NO19G02710, NO19G02710 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO19G02710 vs. NCBI_GenBank
Match: XP_009515364.1 (hypothetical protein PHYSODRAFT_471379 [Phytophthora sojae] >EGZ28089.1 hypothetical protein PHYSODRAFT_471379 [Phytophthora sojae]) HSP 1 Score: 73.2 bits (178), Expect = 2.000e-9 Identity = 57/178 (32.02%), Postives = 83/178 (46.63%), Query Frame = 0 Query: 239 SFPPAAATSSVPLSPSEA---AAAVWVELVDEGTGRVYYYDNVSGATRWSMPQAFQGESRTAW--PE-----------------------------------GG----LHGGLQPPVISAYDRDVRILSHFFDPSTLAANREEAKRKKAEM-CTGVDWRQVKDKKKAEKKRRGNEWLY 372 S PPAAA + V ++A A A W + VD T R YY++ V+G T+W+ P A W PE GG + G+ P DR R +SHFFD + L NREEA+R+K ++ +DW+++ +KKA+K+++ NEWLY Sbjct: 215 SAPPAAAAAHVDGDGADAPRTAKAEWQQHVDAQTQRYYYHNEVTGVTQWNKPDAPIVSGLAIWIPPEESESDSTAAGRKTVSGVNYVARAKFNRLTGKYEQLGGDEYWQNAGIAP------DRAGRQMSHFFDMTELEKNREEARRRKEQLKRKHIDWKKITAEKKAKKQKQRNEWLY 386
BLAST of NO19G02710 vs. NCBI_GenBank
Match: XP_002906334.1 (conserved hypothetical protein [Phytophthora infestans T30-4] >EEY65735.1 conserved hypothetical protein [Phytophthora infestans T30-4]) HSP 1 Score: 69.7 bits (169), Expect = 2.200e-8 Identity = 47/154 (30.52%), Postives = 71/154 (46.10%), Query Frame = 0 Query: 254 SEAAAAVWVELVDEGTGRVYYYDNVSGATRWSMPQA------------FQGESRTAWPEGGLHGGLQ-----------------------PPVISAYDRDVRILSHFFDPSTLAANREEAKRKKAEM-CTGVDWRQVKDKKKAEKKRRGNEWLY 372 + A A W + VD T R YY++ V+G T+W+ P A E ++ P G+ A DR R +SHFFD S L NREEA+R+K ++ +DW+++ +KKA+K+++ NEWLY Sbjct: 230 TRTAKAAWQQHVDAQTQRYYYHNVVTGVTQWNKPNAPVXXXXXXXXXXXXXELDSSGPSQKTVSGVNYVAQAKFNRLTGKYEQLGGDEYWQSAGMASDRAGRQMSHFFDMSELEKNREEARRRKEQLKRKNIDWKKITAEKKAKKQKQRNEWLY 383
BLAST of NO19G02710 vs. NCBI_GenBank
Match: XP_005853613.1 (hypothetical protein NGA_0714320, partial [Nannochloropsis gaditana CCMP526] >EKU22747.1 hypothetical protein NGA_0714320, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 68.9 bits (167), Expect = 3.700e-8 Identity = 53/150 (35.33%), Postives = 76/150 (50.67%), Query Frame = 0 Query: 241 PPAAATSSVPLSPSEAAA-AVWVELVDEGTGRVYYYDNVSGATRWSMPQAFQ-GESRTAWPEGGLHG------------------------GLQPPVISAYDRDVRILSHFFDPSTLAANREEAKRKKAEMCTGVDWR-QVKDKKKAEKK 364 P A + +S PL SE A WV+L +EGTGR +YY+ VS +W +P +Q GE W EGG G LQP + + +RD R+L H+FD STL NRE+AK+K+ G + Q + K++++K Sbjct: 6 PDADSPNSPPLPGSEPALDETWVKLCEEGTGRAFYYNVVSQTRQWEVPLGYQVGE----W-EGGRGGKREGREATLFFLCPRDSLPLSPLFSLQPRLPAPCERDGRMLRHYFDLSTLPGNREDAKKKEEGTRRGKALKVQCGESKRSDEK 150
BLAST of NO19G02710 vs. NCBI_GenBank
Match: XP_005852479.1 (hypothetical protein NGA_0714310 [Nannochloropsis gaditana CCMP526] >EKU23353.1 hypothetical protein NGA_0714310 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 68.9 bits (167), Expect = 3.700e-8 Identity = 53/150 (35.33%), Postives = 76/150 (50.67%), Query Frame = 0 Query: 241 PPAAATSSVPLSPSEAAA-AVWVELVDEGTGRVYYYDNVSGATRWSMPQAFQ-GESRTAWPEGGLHG------------------------GLQPPVISAYDRDVRILSHFFDPSTLAANREEAKRKKAEMCTGVDWR-QVKDKKKAEKK 364 P A + +S PL SE A WV+L +EGTGR +YY+ VS +W +P +Q GE W EGG G LQP + + +RD R+L H+FD STL NRE+AK+K+ G + Q + K++++K Sbjct: 14 PDADSPNSPPLPGSEPALDETWVKLCEEGTGRAFYYNVVSQTRQWEVPLGYQVGE----W-EGGRGGKREGREATLFFLCPRDSLPLSPLFSLQPRLPAPCERDGRMLRHYFDLSTLPGNREDAKKKEEGTRRGKALKVQCGESKRSDEK 158
BLAST of NO19G02710 vs. NCBI_GenBank
Match: GAX92907.1 (Hypothetical protein PINS_000814 [Pythium insidiosum]) HSP 1 Score: 65.9 bits (159), Expect = 3.100e-7 Identity = 47/150 (31.33%), Postives = 68/150 (45.33%), Query Frame = 0 Query: 261 WVELVDEGTGRVYYYDNVSGATRWSMPQAFQGESRTAW-----PEGGLHGGLQ-PPVIS-------------------------------AYDRDVRILSHFFDPSTLAANREEAKR-KKAEMCTGVDWRQVKDKKKAEKKRRGNEWLYK 373 W + VD + R YY++ V+G T+W P+ + W P H + P +S A DR+ R + HFFD S L NREEAKR K+A VDW++V +KKA K+++ NEWL++ Sbjct: 272 WEQHVDPHSQRYYYHNIVTGVTQWQRPEGPIVSALADWIPPEAPTDDDHAERRHQPTVSGVNYVATAKFNRLTGKYEQLGGDEYWQSMGVATDREGRQMGHFFDTSQLEKNREEAKRIKEALKRKNVDWKKVAAEKKARKQKKQNEWLFQ 421 The following BLAST results are available for this feature:
BLAST of NO19G02710 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 5
Relationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO19G02710 ID=NO19G02710|Name=NO19G02710|organism=Nannochloropsis oceanica|type=gene|length=1967bpback to top protein sequence of NO19G02710.1 >NO19G02710.1-protein ID=NO19G02710.1-protein|Name=NO19G02710.1|organism=Nannochloropsis oceanica|type=polypeptide|length=374bpback to top Synonyms
Publications
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