NO19G02550, NO19G02550 (gene) Nannochloropsis oceanica

Overview
NameNO19G02550
Unique NameNO19G02550
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3033
Alignment locationchr19:757409..760441 +

Link to JBrowse

Properties
Property NameValue
DescriptionGolgi to ER traffic protein 4 homolog
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr19genomechr19:757409..760441 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR007317UPF0363
Homology
BLAST of NO19G02550 vs. NCBI_GenBank
Match: XP_008911178.1 (hypothetical protein PPTG_15656 [Phytophthora parasitica INRA-310] >ETI38090.1 hypothetical protein F443_16101 [Phytophthora parasitica P1569] >ETN03405.1 hypothetical protein PPTG_15656 [Phytophthora parasitica INRA-310] >ETO66861.1 hypothetical protein F444_16086 [Phytophthora parasitica P1976])

HSP 1 Score: 79.7 bits (195), Expect = 1.900e-11
Identity = 77/294 (26.19%), Postives = 120/294 (40.82%), Query Frame = 0
Query:   23 QGVEARIKDLLAAGVKESAYEALQLFSSQAKRQVKDGDVTA-----GVGTALEGATALIDQGYPECGVELGNILLK-FGTEKDVSHDLIRRALLHIDSTLASAGGKNGANDLLRKKLLKAALKWSLSKGLDVYGDKEINTIYGELLWATGELDKAVSRLVVAEAPSLLASKLKEGXXXXXXXXXXXXXXXXXXXRLLGLGVLSFLALENMRDANALIQAYGPPSLXXXXXXXXXXXXXXXXXXXXXXXLQTCERDAADLFKGLLQVYQPYLAVEPAYQGLLAKIGEKYFNLRPP 311
            + V  +++  LAAG     Y ALQ++ +   R +K  + +A      V  A E A  LI+        E+ N+++  F        D  ++ +  ID+          + DL    +LK A+KWS  +G    GD E+  +        G+   A+   + AE P  LA  L +                      L   VL  L+LEN+RDAN + +AY                            L T ERDA  LF+ L + Y P LA + + +  L+ IG+K++ L+PP
Sbjct:   30 ENVTKKLEVQLAAG---DFYGALQMYKTLFMRLLKGDEPSAEQQDKAVALAQEAALKLIEHDQNTAATEMANLMVSVFSDFHHPVDDAHKQRIRQIDAVFQPK--PQFSADL--AVVLKNAVKWSAEEGARKRGDPELQLLLARAYRTAGDFTHALKHFLHAETPQELADALFQ---------WSTQGYPSESDLYLARAVLQLLSLENLRDANKVYEAY------VAKCQSVGRPVDLPLFNFTRFLLLTLERDALPLFQMLQERYAPALARDNSLKSYLSVIGQKFYGLQPP 301          
BLAST of NO19G02550 vs. NCBI_GenBank
Match: ETK78310.1 (hypothetical protein L915_15646 [Phytophthora parasitica] >ETL31740.1 hypothetical protein L916_15542 [Phytophthora parasitica] >ETM38137.1 hypothetical protein L914_15497 [Phytophthora parasitica] >ETP07975.1 hypothetical protein F441_15930 [Phytophthora parasitica CJ01A1] >ETP36020.1 hypothetical protein F442_15952 [Phytophthora parasitica P10297])

HSP 1 Score: 79.7 bits (195), Expect = 1.900e-11
Identity = 77/294 (26.19%), Postives = 120/294 (40.82%), Query Frame = 0
Query:   23 QGVEARIKDLLAAGVKESAYEALQLFSSQAKRQVKDGDVTA-----GVGTALEGATALIDQGYPECGVELGNILLK-FGTEKDVSHDLIRRALLHIDSTLASAGGKNGANDLLRKKLLKAALKWSLSKGLDVYGDKEINTIYGELLWATGELDKAVSRLVVAEAPSLLASKLKEGXXXXXXXXXXXXXXXXXXXRLLGLGVLSFLALENMRDANALIQAYGPPSLXXXXXXXXXXXXXXXXXXXXXXXLQTCERDAADLFKGLLQVYQPYLAVEPAYQGLLAKIGEKYFNLRPP 311
            + V  +++  LAAG     Y ALQ++ +   R +K  + +A      V  A E A  LI+        E+ N+++  F        D  ++ +  ID+          + DL    +LK A+KWS  +G    GD E+  +        G+   A+   + AE P  LA  L +                      L   VL  L+LEN+RDAN + +AY                            L T ERDA  LF+ L + Y P LA + + +  L+ IG+K++ L+PP
Sbjct:   30 ENVTKKLEVQLAAG---DFYGALQMYKTLFMRLLKGDEPSAEQQDKAVALAQEAALKLIEHDQNTAATEMANLMVSVFSDFHHPVDDAHKQRIRQIDAVFQPK--PQFSADL--AVVLKNAVKWSAEEGARKRGDPELQLLLARAYRTAGDFTHALKHFLHAETPQELADALFQ---------WSTQGYPSESDLYLARAVLQLLSLENLRDANKVYEAY------VAKCQSVGRPVDLPLFNFTRFLLLTLERDALPLFQMLQERYAPALARDNSLKSYLSVIGQKFYGLQPP 301          
BLAST of NO19G02550 vs. NCBI_GenBank
Match: ETL84968.1 (hypothetical protein L917_15364 [Phytophthora parasitica])

HSP 1 Score: 79.7 bits (195), Expect = 1.900e-11
Identity = 77/294 (26.19%), Postives = 120/294 (40.82%), Query Frame = 0
Query:   23 QGVEARIKDLLAAGVKESAYEALQLFSSQAKRQVKDGDVTA-----GVGTALEGATALIDQGYPECGVELGNILLK-FGTEKDVSHDLIRRALLHIDSTLASAGGKNGANDLLRKKLLKAALKWSLSKGLDVYGDKEINTIYGELLWATGELDKAVSRLVVAEAPSLLASKLKEGXXXXXXXXXXXXXXXXXXXRLLGLGVLSFLALENMRDANALIQAYGPPSLXXXXXXXXXXXXXXXXXXXXXXXLQTCERDAADLFKGLLQVYQPYLAVEPAYQGLLAKIGEKYFNLRPP 311
            + V  +++  LAAG     Y ALQ++ +   R +K  + +A      V  A E A  LI+        E+ N+++  F        D  ++ +  ID+          + DL    +LK A+KWS  +G    GD E+  +        G+   A+   + AE P  LA  L +                      L   VL  L+LEN+RDAN + +AY                            L T ERDA  LF+ L + Y P LA + + +  L+ IG+K++ L+PP
Sbjct:   30 ENVTKKLEVQLAAG---DFYGALQMYKTLFMRLLKGDEPSAEQQDKAVALAQEAALKLIEHDQNTAATEMANLMVSVFSDFHHPVDDAHKQRIRQIDAVFQPK--PQFSADL--AVVLKNAVKWSAEEGARKRGDPELQLLLARAYRTAGDFTHALKHFLHAETPQELADALFQ---------WSTQGYPSESDLYLARAVLQLLSLENLRDANKVYEAY------VAKCQSVGRPVDLPLFNFTRFLLLTLERDALPLFQMLQERYAPALARDNSLKSYLSVIGQKFYGLQPP 301          
BLAST of NO19G02550 vs. NCBI_GenBank
Match: XP_004342754.1 (hypothetical protein CAOG_08153 [Capsaspora owczarzaki ATCC 30864] >KJE98140.1 hypothetical protein CAOG_008153 [Capsaspora owczarzaki ATCC 30864])

HSP 1 Score: 75.9 bits (185), Expect = 2.700e-10
Identity = 78/288 (27.08%), Postives = 121/288 (42.01%), Query Frame = 0
Query:   25 VEARIKDLLAAGVKESAYEALQLFSSQAKRQVKDGDVTAGVGTALEGATALIDQGYPECGVELGNILLKFGTEKDVSHDLIRRALLHIDSTLASAGGKNGANDLLRKKLLKAALKWSLSKGLDVYGDKEINTIYGELLWATGELDKAVSRLVV-AEAPSL-LASKLKEGXXXXXXXXXXXXXXXXXXXRLLGLGVLSFLALENMRDANALIQAYGP--PSLXXXXXXXXXXXXXXXXXXXXXXXLQTCERDAADLFKGLLQVYQPYLAVEPAYQGLLAKIGEKYFNLR 309
            V A+++  + AG     YEA Q++ S   R     D  + +     G+T     G      +L  ++L   T +    D   ++L  I + L S   ++ A    R KL++ +LKWS + G +  GD  ++ ++G   W       A S LV+  EA +L LA  L E                      +   VL +L L N+RDAN L + +    PS+                       L T ERDAA LFK L + Y+P L  + ++   L  IG+ +FN+R
Sbjct:   10 VLAKLEKSIEAG---DYYEAHQMYRSVYARYAAQNDFDSAILLVYTGSTLFFKHGQTGSAGDLAVLMLDAYTAQPTPLD--EKSLARI-AELFSGYKEDHAT---RDKLVRQSLKWSTAVGRNTRGDPSLHHLFGTAFWREHNYQLAESHLVLGTEASALSLAEMLLE---------WSQKGSPSELELFITRAVLKYLELGNLRDANVLFRTFTAQHPSI-------RNPPFRLPLLNFCHFLLATLERDAAPLFKMLREKYRPSLQRDASFDASLDAIGQCFFNIR 272          
BLAST of NO19G02550 vs. NCBI_GenBank
Match: XP_002997571.1 (conserved hypothetical protein [Phytophthora infestans T30-4] >EEY68586.1 conserved hypothetical protein [Phytophthora infestans T30-4])

HSP 1 Score: 75.5 bits (184), Expect = 3.600e-10
Identity = 71/275 (25.82%), Postives = 110/275 (40.00%), Query Frame = 0
Query:   42 YEALQLFSSQAKRQVKDGDVTA-----GVGTALEGATALIDQGYPECGVELGNILLK-FGTEKDVSHDLIRRALLHIDSTLASAGGKNGANDLLRKKLLKAALKWSLSKGLDVYGDKEINTIYGELLWATGELDKAVSRLVVAEAPSLLASKLKEGXXXXXXXXXXXXXXXXXXXRLLGLGVLSFLALENMRDANALIQAYGPPSLXXXXXXXXXXXXXXXXXXXXXXXLQTCERDAADLFKGLLQVYQPYLAVEPAYQGLLAKIGEKYFNLRPP 311
            Y ALQ++ +   R +K  + +A      V  A E A  LI+        E+ N+++  F        D  ++ +  ID+   S      + D+     LK  +KWS  +G    GD E+  +        G+   A+   + AE P  LA  L +                      L   VL  L+LEN+RDAN + +AY                            L T ERDA  LF+ L + Y P LA + + +  L+ IG+K++ L+PP
Sbjct:   45 YGALQMYKTLFMRLLKGDEPSAEQQNKAVVLAQEAALKLIEHDQNTAATEMANLMVSVFSDFHHAVDDAHKQRIRQIDAAFQSK--PQFSADV--AVFLKNTVKWSAEEGARKRGDPELQLLLARAYRTAGDFTHALKHFLHAENPQELADTLFQ---------WSTQGYPSESDLYLARAVLQLLSLENLRDANKVYEAY------VAKCQSVGRPVDLPLFNFTRFLLLTLERDALPLFQMLQERYAPALARDSSLKNYLSVIGQKFYGLQPP 300          
BLAST of NO19G02550 vs. NCBI_GenBank
Match: XP_009530815.1 (hypothetical protein PHYSODRAFT_316672 [Phytophthora sojae] >EGZ13386.1 hypothetical protein PHYSODRAFT_316672 [Phytophthora sojae])

HSP 1 Score: 73.9 bits (180), Expect = 1.000e-9
Identity = 70/293 (23.89%), Postives = 119/293 (40.61%), Query Frame = 0
Query:   23 QGVEARIKDLLAAGVKESAYEALQLFSSQAKRQVKDGDVTA-----GVGTALEGATALIDQGYPECGVELGNILLKFGTEKDVSHDLIRRALLHIDSTLASAGGKNGANDLLRKKLLKAALKWSLSKGLDVYGDKEINTIYGELLWATGELDKAVSRLVVAEAPSLLASKLKEGXXXXXXXXXXXXXXXXXXXRLLGLGVLSFLALENMRDANALIQAYGPPSLXXXXXXXXXXXXXXXXXXXXXXXLQTCERDAADLFKGLLQVYQPYLAVEPAYQGLLAKIGEKYFNLRPP 311
            + V  +++  LAAG     Y ALQ++ +   R +K  + +A         AL+ A  L++        E+ N+++    +     D   +  + + +       +  A+  +    LK A+KWS ++G    GD E+  +        G+   A+   + +E P  LA  L +                      L   VL  L+LEN+RDAN + +AY                            L T ERDA  LF+ L + Y P LA + + +  L+ IG+K++ L+PP
Sbjct:   29 ENVGKKLELRLAAG---DFYGALQMYKTLFMRFLKGDEPSAEQQEKAAALALDAALKLVEHDQNTAATEMANLMVSVFADFHHPVDDAHKQRVRLVAAAFEPKPQFSADLAV---FLKNAVKWSAAEGARKRGDPELQLLLARAYRTAGDFTHAMKHFLHSENPQELADALFQ---------WSTQGYPSESDLYLARAVLQLLSLENLRDANKVYEAY------VAKCQSAGRPVDLPLFNFTRFLLLTLERDALPLFQMLQERYTPALARDSSLKSYLSVIGQKFYGLQPP 300          
BLAST of NO19G02550 vs. NCBI_GenBank
Match: XP_024388542.1 (Golgi to ER traffic protein 4 homolog [Physcomitrella patens] >PNR45553.1 hypothetical protein PHYPA_015324 [Physcomitrella patens])

HSP 1 Score: 73.6 bits (179), Expect = 1.300e-9
Identity = 75/294 (25.51%), Postives = 111/294 (37.76%), Query Frame = 0
Query:   42 YEALQLFSSQAKRQVKDGDVTAGVGTALEGATALIDQGYPECGVELGNILLK-FGTEK----DVSHDLIRRALLHIDSTLASAGGKNGANDLLR-------------------KKLLKAALKWSLSKGLDVYGDKEINTIYGELLWATG---ELDKAVSRLVVAEAPSLLASKLKEGXXXXXXXXXXXXXXXXXXXRLLGLGVLSFLALENMRDANALIQAYGPPSLXXXXXXXXXXXXXXXXXXXXXXXLQTCERDAADLFKGLLQVYQPYLAVEPAYQGLLAKIGEKYFNLR 309
            YEA Q++ +   R +        +     GA A+++ G   CG ELG +L++ F   K      + D IR        T  +   K+ +ND                         L++ALKWS+  G    G  E++ + GE +W      E  KA    V    P   A  + E                     ++   VL +L+L N+RDAN L       S+                       L T ERDA  LFK L Q Y+P L  + +    L +IGE++FNL+
Sbjct:   27 YEAQQMYKTIHSRYMHAKKYNEAIELLNSGAVAMLNHGEVTCGTELGVLLIQTFNVAKLPFDSSTLDQIRTIYNAYPRTAGTRQEKSSSNDTSNLGVESSEAAVIAKTRVEGCTSFLRSALKWSIETGGFPRGAPELHDMLGEYIWTESPHPETMKASQHFVRGNQPETFAKVVVE---------CMDKCYPGEADLVVARAVLLYLSLGNLRDANRLWD-----SVRQRLSDSSQELPDTPLLHFIKFLLLTLERDALPLFKMLRQKYKPSLDRDTSLDEYLDEIGERFFNLQ 306          
BLAST of NO19G02550 vs. NCBI_GenBank
Match: XP_021735646.1 (Golgi to ER traffic protein 4 homolog [Chenopodium quinoa])

HSP 1 Score: 70.1 bits (170), Expect = 1.500e-8
Identity = 72/276 (26.09%), Postives = 110/276 (39.86%), Query Frame = 0
Query:   39 ESAYEALQLFSSQAKRQVKDGDVTAGVGTALEGATALIDQGYP---ECGVELGNILLKFGTEKDVSHDLIRRALLHIDSTLASAGGKNGANDLLRKKLLKAALKWSLSKGLDVYGDKEINTIYGELLWA-TGELD--KAVSRLVVAEAPSLLASKLKEGXXXXXXXXXXXXXXXXXXXRLLGLGVLSFLALENMRDANALIQAYGPPSLXXXXXXXXXXXXXXXXXXXXXXXLQTCERDAADLFKGLLQVYQPYLAVEPAYQGLLAKIGEKYFNLR 309
            E  YEAL +  S A  Q+K   VT G   AL     L+   +P   +    L  I   F       H      +  +   L +A  +  A        L+AA++WS+  G D  G +E++T+  E +++ T E+D  K     V   +P   A  L +                      +   VL +LAL NMRDAN ++       +                       LQT ERDA  LF+ L Q Y+  + ++PA+   L +I EK++ +R
Sbjct:   46 ERYYEALDILESGACLQLKHDQVTCGAELALLFVETLVKGKFPYNDDLLDRLRKIYEAFPRNAVPDHVGDDDDMQKLSEALGAAKIRVEA----CASFLRAAIRWSIELGPDRNGSRELHTMLAEYIYSETPEVDMAKVSFHFVRGNSPKKFADTLVD---------FMEKCYPGEDDLAIARAVLMYLALGNMRDANYVLN-----EVKKQAESKELDFPDSDLMQFINYLLQTLERDALPLFRMLRQSYKSSIDIDPAFNEFLDEIAEKFYGVR 303          
BLAST of NO19G02550 vs. NCBI_GenBank
Match: PKC76312.1 (DUF410-domain-containing protein [Rhizophagus irregularis])

HSP 1 Score: 68.9 bits (167), Expect = 3.300e-8
Identity = 72/298 (24.16%), Postives = 115/298 (38.59%), Query Frame = 0
Query:   28 RIKDLLAAGVKE-SAYEALQLFSSQAKRQVKDGDVTAGVGTALEGATALIDQGYPECGVELGNILLKFGTEKDVSHDLIRRALLHIDSTLASAGGKNGANDLLRKKLLKAALKWSLSKGLDVYGDKEINTIYGELLWATGELDKAVSRLVV--AEAPSLLASKLKEGXXXXXXXXXXXXXXXXXXXRLLGLGVLSFLALENMRDANALIQ--------------AYGPPSLXXXXXXXXXXXXXXXXXXXXXXXLQTCERDAADLFKGLLQVYQPYLAVEPAYQGLLAKIGEKYFNLR 309
            ++ D L   V+E + YEA Q++ +  +R +K     + +     GA  L+       G++L   L+    E+ +S     RA L     L         N+  RK+ +  A+ W++  G +  GD E++   GEL W      +A    +   AE+       L E                      +   VL +L L ++R+A                   A   P+L                       + T +RDAADLF  L   Y+  L++EP++  LL KIGE +FNLR
Sbjct:    9 KVLDKLKVSVEEGNYYEAHQMYRTVCRRYIKQRKYMSAIDLLYSGAETLLKHKQTGSGIDLSLYLIDAYNEEQMSVTEESRARLIQLLELFP------HNEPGRKRFIDVAISWTVKFGENPAGDPELHHFVGELFWKDKMYHEAEPHFLAGNAESSKSYGKMLAE---------WSGKDHPSKRGAYIARAVLQYLCLRSIREAKTSFDTFIAEIDSSIKSGTAQYQPTL--TGDKIEVAIYSLSLLNFLQLLILTVQRDAADLFINLRNKYKNDLSIEPSFDELLNKIGEIFFNLR 289          
BLAST of NO19G02550 vs. NCBI_GenBank
Match: EXX55362.1 (Get4p [Rhizophagus irregularis DAOM 197198w] >GBC27701.1 ER membrane insertion protein get4 [Rhizophagus irregularis DAOM 181602] >PKC00735.1 DUF410-domain-containing protein [Rhizophagus irregularis] >PKC03581.1 DUF410-domain-containing protein [Rhizophagus irregularis] >PKK79672.1 DUF410-domain-containing protein [Rhizophagus irregularis] >PKY28760.1 DUF410-domain-containing protein [Rhizophagus irregularis] >POG70476.1 hypothetical protein GLOIN_2v1615114 [Rhizophagus irregularis DAOM 181602=DAOM 197198])

HSP 1 Score: 68.2 bits (165), Expect = 5.700e-8
Identity = 71/298 (23.83%), Postives = 115/298 (38.59%), Query Frame = 0
Query:   28 RIKDLLAAGVKE-SAYEALQLFSSQAKRQVKDGDVTAGVGTALEGATALIDQGYPECGVELGNILLKFGTEKDVSHDLIRRALLHIDSTLASAGGKNGANDLLRKKLLKAALKWSLSKGLDVYGDKEINTIYGELLWATGELDKAVSRLVV--AEAPSLLASKLKEGXXXXXXXXXXXXXXXXXXXRLLGLGVLSFLALENMRDANALIQ--------------AYGPPSLXXXXXXXXXXXXXXXXXXXXXXXLQTCERDAADLFKGLLQVYQPYLAVEPAYQGLLAKIGEKYFNLR 309
            ++ D L   V+E + YEA Q++ +  +R +K     + +     GA  L+       G++L   L+    E+ +S     RA +     L         N+  RK+ +  A+ W++  G +  GD E++   GEL W      +A    +   AE+       L E                      +   VL +L L ++R+A                   A   P+L                       + T +RDAADLF  L   Y+  L++EP++  LL KIGE +FNLR
Sbjct:    9 KVLDKLKVSVEEGNYYEAHQMYRTVCRRYIKQRKYMSAIDLLYSGAETLLKHKQTGSGIDLSLYLIDAYNEEQMSVTEESRARIIQLLELFP------HNEPGRKRFIDVAISWTVKFGENPAGDPELHHFVGELFWKDKMYHEAEPHFLAGNAESSKSYGKMLAE---------WSGKDHPSKRGAYIARAVLQYLCLRSIREAKTSFDTFIAEIDSSIKSGTAQYQPTL--TGDKIEVAIYSLSLLNFLQLLILTVQRDAADLFINLRNKYKNDLSIEPSFDELLNKIGEIFFNLR 289          
The following BLAST results are available for this feature:
BLAST of NO19G02550 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 15
Match NameE-valueIdentityDescription
XP_008911178.11.900e-1126.19hypothetical protein PPTG_15656 [Phytophthora para... [more]
ETK78310.11.900e-1126.19hypothetical protein L915_15646 [Phytophthora para... [more]
ETL84968.11.900e-1126.19hypothetical protein L917_15364 [Phytophthora para... [more]
XP_004342754.12.700e-1027.08hypothetical protein CAOG_08153 [Capsaspora owczar... [more]
XP_002997571.13.600e-1025.82conserved hypothetical protein [Phytophthora infes... [more]
XP_009530815.11.000e-923.89hypothetical protein PHYSODRAFT_316672 [Phytophtho... [more]
XP_024388542.11.300e-925.51Golgi to ER traffic protein 4 homolog [Physcomitre... [more]
XP_021735646.11.500e-826.09Golgi to ER traffic protein 4 homolog [Chenopodium... [more]
PKC76312.13.300e-824.16DUF410-domain-containing protein [Rhizophagus irre... [more]
EXX55362.15.700e-823.83Get4p [Rhizophagus irregularis DAOM 197198w] >GBC2... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniR034ncniR034Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR039ngnoR039Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO19G02550.1NO19G02550.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO19G02550.1NO19G02550.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO19G02550 ID=NO19G02550|Name=NO19G02550|organism=Nannochloropsis oceanica|type=gene|length=3033bp
ACAGAGAACCATGGCAGTCATCGATCCCAACGACGACAGCGAGTCACCTC
ACATGGAAGGCCCGACCATCACAAGGCAAGGGGTTGAGGCACGCATCAAG
GACCTGCTGGCAGCGGGCGTGAAGGAGAGgtacagaggcaggggtgatca
agttagggacaggtggagatagggaaggacaaggggagagtcggaagagg
aggaacggaaggaggtcttgagcacaagaggcaagagtgaaggagctgct
cttgtgggcatgaaacgaaaaaagggagggaggagccagggtattattcg
cctacgctctgtgtgattgccctaaatagcctgaggggacgtaggaagaa
gattgtcgcggtgtgcgtgcgtgtctatctcgttgagcttcgtccctcac
tgcctctccttccttgcctctattctttccctcatcaacgcagCGCGTAT
GAGGCACTGCAGCTGTTCTCGTCCCAGGCGAAGCGGCAGGTGAAAGACGG
CGACGTGACGGCCGGCGTAGGCACGGCACTTGAAGgtaagaaagggatgg
aggtaggtggagagggagggcgggctgtgaaggaagaggaggaggaggag
agggtcatgcaacagcctcagcctcttaattttaatccttccagcccgcc
gctcattggaaacagtatgatctcctgttgtagtgcagcacgctgcttgt
catgagggatgtgcctttcaggctaatggccagcatccaccttgtgtttt
cctcgaaggggtgccttccctccttccctccttcctttcccattcccttt
cccttcttccaagcgccactaccttcatcgacctaggccattaatggagg
gagggggggggggaagcgtctaattattctccctccttccgacgacctgc
ccatctttccgtccttctcacaaccaccccctctccttccctccctccag
GCGCCACGGCTCTCATCGACCAAGGCTATCCGGAGTGCGGCGTTGAGCTC
GGGAATATTCTCCTCAAGTTCGGCACAGAAAAAGACGTGTCCCATGACCT
Ggtacgagcctccctcctttcctccctccctcctttcctccctccctccc
tccttccctccttccctccctcccttcctccctccctccctccctccctc
tttacttccctccctccctactttcctccctccctccctccttccccccc
tcccgtgtgtctctccctcccttcctccctccctactttcccccctcccg
tgtgtctctccttctctcctgacttccttccctccctcagcgctacgccc
tgccgcacctcactttctttctcgcgactaccgcaggcccaactaacctc
cccccacgcattgcactgctccctccctccctccctccctccctccctcc
ctcagATCCGCCGTGCCCTCCTCCACATTGATTCCACCCTTGCGTCTGCC
GGGGGAAAAAATGGCGCCAATGATCTCCTTCGGAAGAAGCTCCTCAAGGC
AGCCCTCAAGTGGTCATTGTCCAAGgtaagcctccctccctccctccctc
ccttcttctaattcccttctacattccttcatcccttcttctctcccccc
ctccccccctcctttccttcctctcttcttctcgccttcgcccaccccac
ctaaatctgccttccctccctccgtccctccctccctccttccctcagGG
ACTGGATGTGTACGGAGACAAGGAGATCAACACCATCTACGGCGAGCTCC
TCTGGGCCACTGGGGAGgtacgtcctccctccctccctccctccctccct
cccgccttccctccctcccttttcctccctcatttctctactcgtttccc
ctttcatttattcactcgcttcttcactcgcactcacccctccctcacat
ttatcgcacccaccctcccttcctccctccctctctttctctccctcaca
ttcaccgcactctccctccctccctccctccctccctccctccctccctc
cctccctccctcgcagTTGGATAAAGCCGTCTCTCGCTTGGTAGTCGCCG
AAGCCCCTTCCCTCCTGGCCTCCAAGCTAAAGGAGGGAGGGGGCGAGGGA
GGGGGCGAGGGAGGGGGCGAGGGAGGGGGCGAGGGAGGGACGGAGAGGCT
GTTGGGCCTGGGGGTGTTGAGCTTTTTGGCGCTCGAAAATATGAGGGATG
CAAACGCCTTGATCCAGgtaggtagggagggagggagggagggaaggacg
aggggggggaggagggagagatgatggaaaggagggagggagggaagcga
aggagggagagaaggagggagggagggagggagggagggaggaaggagga
ctgttccatagagtgtctgcctgtgtttgatgattccactgacaaactct
cccttcctcccccctccctccctccctcctcttttttccccacaacggca
cacacagGCCTATGGTCCTCCCTCCCTCCCTTCCTCCTCCCCCTCCTCCC
CCTCCCTCCCCCCTTCTTCCCCCCTCCTCACCTTCCTCGTCTTCCTTCTC
CAAACATGCGAAAGAGACGCGGCCGATCTCTTCAAAGGCCTCTTGCAAGT
CTATCAGCCCTACCTAGCCGTCGAGCCCGCCTACCAGgtacgccctccct
ccctccctccctccctccctccctccctccctccctccctccctccctct
cgctctttctcccttccttcctccctccctccctctctctctcctactca
tcatatgccccccctccctccctcccttcccttcctttttcctcccgcag
GGACTATTGGCCAAGATAGGTGAGAAATATTTTAATTTACGGCCGCCCCC
CAATATGCTTTCGATGCTGGCAGGCCTCATGGGAGGAGGGGGAGGAGGAG
GGGGGGGATGGTTCGGTAGCGATTGAGGAAGCAAGAAGGAAAGTGAGCCA
GAAAGAGAGGGAGGGGGAGGGGAGGGAAGAGGTAGAGGGGAGGGTGAAGC
AATGCGAGAGGGAAAGCGAGAGATAAAAAAGCA
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protein sequence of NO19G02550.1

>NO19G02550.1-protein ID=NO19G02550.1-protein|Name=NO19G02550.1|organism=Nannochloropsis oceanica|type=polypeptide|length=336bp
MAVIDPNDDSESPHMEGPTITRQGVEARIKDLLAAGVKESAYEALQLFSS
QAKRQVKDGDVTAGVGTALEGATALIDQGYPECGVELGNILLKFGTEKDV
SHDLIRRALLHIDSTLASAGGKNGANDLLRKKLLKAALKWSLSKGLDVYG
DKEINTIYGELLWATGELDKAVSRLVVAEAPSLLASKLKEGGGEGGGEGG
GEGGGEGGTERLLGLGVLSFLALENMRDANALIQAYGPPSLPSSSPSSPS
LPPSSPLLTFLVFLLQTCERDAADLFKGLLQVYQPYLAVEPAYQGLLAKI
GEKYFNLRPPPNMLSMLAGLMGGGGGGGGGWFGSD*
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Synonyms
Publications