NO19G01430, NO19G01430 (gene) Nannochloropsis oceanica

Overview
NameNO19G01430
Unique NameNO19G01430
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3369
Alignment locationchr19:439339..442707 -

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr19genomechr19:439339..442707 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO19G01430 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL013nonsL013Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL012nonsL012Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR034ncniR034Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR039ngnoR039Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR037ngnoR037Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO19G01430.1NO19G01430.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|599098gene_7538Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO19G01430.1NO19G01430.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO19G01430 ID=NO19G01430|Name=NO19G01430|organism=Nannochloropsis oceanica|type=gene|length=3369bp
AAAACAACAAAGAATGACCAGACAGCCGCCAGAGGCCGCGACATGCAAGG
GCTCTGCTGCGGCAGGCAAGCCCCAGCAGCCGCCCCCGCCCACCAACGCG
CGTCCTGCATACCTTGCGCTGCCTTCAGTCTACGCCACGCCATCGCCATC
CTCCACGTTTCCCCCGCGTAAACTCCCTACCACATCGTCCCAGCTCCAGC
CCTCCCGCTCCCGTCTGAAATACCGTGGAGAGGAGTACGACTCCGCGGCA
CCGGTGGAAATTACTTTTGACTCGCTGGCGTCGGGCTCGCCTCGGATGGA
TGCAGGAGTGGGGCGTGGTGGTAAGGCAACTCACGACAGCAGAGGGCACA
ACCAGCTCTCCTTGCAGAAACAGCGTGAGTTGGACCGTCTGAAAGAGATC
CGCCGTGCGCAACAGGAGAAGATTGAGCGCGCGAAGGAATGGTTATTGCA
ACGCCGTGCTTCCTCTGCAGCCCCGTCCCTTTCCTCCTTCCCCTTATCCG
CCTCCGCCGCCTTACCCATCATCCTAGGGTCTACATCCTTCTCTATTGCA
CATACAGGTCCGCCGTCCTCCGCGTCTCTGTCGTCCTCTTCGATCGCCCT
CACCGCCCGCCTGGACGAAAAGCCTCCCGCTGTTGAAACCGCTGAGGGGG
CGTCTCTGTCAGCCCTCCAGCCTTTGGCTGTAAACTTTCCCAACAAAAAC
AATAAAACAAAGGCCACTTGTGTTCAAGCACTGGTGGCCGAGGCCCTGGC
CGCCATCAAGGCAGCGATGGAGAGCAAAAGCACGCAGGTTGAGGAAGGGG
ATTTGCCTGTATCTGCTTCTGGTCTTTTGGCCGTGGATGCGTCGATCATG
GCAGCGGTAGCCATCGAACCCTCTCTTTCTCCTTCTATTCTTATAAAAGG
CAATAGAGTTAAAGGCGAAACTGTATCATACGATGTAGGACAAGGGCAAG
AGCATCAGTGTCAGGAACAGGAGGAGCTACCCTTGTCGTTGCCTCATCCG
GAGCAGCTGTTGGCCACGGGAATGGAAGGTATAGTCAGTAGCATACCACC
GCAAGACAAGGAGGAAGCGTCGACAACGACAAGAAATAATATCGAGGGCT
CTATGGCCTCAGCTGCCATTGAACCTGAAGACACGCCCGCGGCTGGGGGG
TCGTTATCGTCGCCCCCGCAGGCCGTGCTCTTCTCCTTGCTGGAGCAGCA
GGGTGAGGAGCAGCAGCAGCAACAGCTACAGCTACAGCTACAGCTACAGC
TACAGCTACAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAG
CAGCAGCAGCAGCAGCAGCAGCAGAGACACCAACGACGTATGACAGCTTT
GGGGGAGCGTTTGGAAGCTCGAACTTTCGTCCGTGGCTTTTTGGTGGAGG
TGCGGAAGGACGTCATCTCCATGCTGCAGGAGGAAGGGGCATTTGACGGA
CCTGATGCTGTGGATGCTGGTAGCAGTATTGCTCCTGAAGAAGCTGTGGA
AGCTGCAACCGTGAAGGCTGTTGCTACCGCTACAGCAGCTACAACTACTA
TGGCTGTTGCTGTAGAACTTGTCGCTGCTGCCGGGGCCTCCCTCGCGCAG
GTGCTACGGGAGGAGGAACTAGCGGGGGAGGACGAGGCGCATAAGAAGGA
GGAGGAGGCGGAGCAGGAGGGGCCGCATATTGATCTAAGTGCTGCTAATG
TTAAGAAGAATTTCTTAAGTGCCACCCCTTCGGTAACAATGTTTTCCGCG
TCTTATGAGGAAGAGCAGAAGGAGCAGGGGGATGAGGAGCAGCAGGAGCA
GCATCCGCAGATAGGACAAGATATGGTTCTTCCTGCTGACGATGTCTCGG
CTATCATCGAGGTGCAGGAGCACGCTGCAGAGGGAGAGAAGGAGATTAAA
GTGGCAGAACTTACCTTCCCTGACCAGCAACAGGAGGCAATGGTTTTGCC
TGTCCTCCTGGAGGGAGATGAGGATGTGAAGCCCGGGGCGCAGGCTGAGG
TCGTCACCCTCTCTTTGCACTCGCAACTGCAACCACCGTTCTTGCATGTG
CTTCAGGAGGAGGAAGGGGGTGACGATAAGGAGGCACAAGACGAGCCAAT
TCTTCTTGAGCAAGAGGGTGAGGGCTTGACAGTGATGGAGCGGGCCACAG
CCGTGGCGGCAGCGGCGACTGACGGGAAGGGGAATCAGCAGGGGCAGCAA
CAGCAGGAACAACAGCCCTCTATGCTCGTTTTGGAGCCGGTCGAAGAGAG
AAAGAAGGCGGAAGCGCCTGTGGTGGCGATCGAACCTGGTTTGATTGTGA
CCACAGCGCCTGCAGGGGAGGAGAAGGAGGAGGAGGAGCAACAGCAGGAG
CAGCAGCAGGAAGGGGAGAGGGAGGAGGAGGAGGAGGAGGCGGCGGCATT
TGTACTACAGGCGGACGAGGAGGAGAAAGAGAAAATGGCGAGCGCGGTAG
CCACCGCGGTGGTTCCTGAGGAAGACGAGGAGAAAGAGGAAAAGGAAGAG
GAGGAGGAAAAGCAGCAGCAGCCTGCGTTGGAACCGAGAAAGAAGGAAAG
AGGTAGAAAGGAACAAAGAGATGAGGAGGAAGCAGGGGCGTGTGGTCCTC
TCCATGCGGCGGCAGAAGCTTTTGAAGCAGTCCCCTCTGTTGACAGGGAA
GAGGTGCTTGAAGCAGGGGCTGAGGCAGATGCAGGTAGCATGGTTGAACC
TACGGTGGTCCTGTCCTCCGTCTTGGTGGAAGGGGGAGAGGAGGACCAAG
AAAGTTCCATTCGGCTCGAAGCGAGTGGGGCGGGCGATGCGACGGAGGAG
CAAAAGCAAGAGAAGGATGAGGATGAGGGCAGCTCCAGCAATGGAAAGGA
CAGGACAGTGGAAGAGGCAGGCCTGATTGAGGAGGAGTAGCAAGCTACGA
CAAGTATAGAAGAGAAGAATGAAGAAAATGGGGTGACAGTGACGACAGTT
GTCTCTGGCGCCGAGCAAGAGGTTGAGAATTAGAAACGTGGTGGACGACA
GTGCATGGAACGAGGAGAAAGATATAGAGAGAGGAGAATATAATCTACCA
ATGTAGGAAAATGAGAGCAAGTACAATTAATTTTAAAAGAATTGGAGGGT
GGAGAATCATGAGGGATGCTGTGTCGCTGATCTCTCCGGCCAAGAGAAAG
TGGTCGAATGACAGATGAGTCGTGGCGTAGAGATCGTACTGTGTGAAACA
TGCCCGGATGTGTCGTGTTGATGTGTGTGTGCACCATATCTTTGTATGTA
CTAACTCAGGAAAGTCGCACTGGAATTTGGTTTCATTGGAATACGGTGCC
ATGCGCAGTGCGACATCAAGGAGAGACACAAGCAAGAAGACAAATAAAAA
AAACTCAAATGTATAGGCT
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protein sequence of NO19G01430.1

>NO19G01430.1-protein ID=NO19G01430.1-protein|Name=NO19G01430.1|organism=Nannochloropsis oceanica|type=polypeptide|length=959bp
MTRQPPEAATCKGSAAAGKPQQPPPPTNARPAYLALPSVYATPSPSSTFP
PRKLPTTSSQLQPSRSRLKYRGEEYDSAAPVEITFDSLASGSPRMDAGVG
RGGKATHDSRGHNQLSLQKQRELDRLKEIRRAQQEKIERAKEWLLQRRAS
SAAPSLSSFPLSASAALPIILGSTSFSIAHTGPPSSASLSSSSIALTARL
DEKPPAVETAEGASLSALQPLAVNFPNKNNKTKATCVQALVAEALAAIKA
AMESKSTQVEEGDLPVSASGLLAVDASIMAAVAIEPSLSPSILIKGNRVK
GETVSYDVGQGQEHQCQEQEELPLSLPHPEQLLATGMEGIVSSIPPQDKE
EASTTTRNNIEGSMASAAIEPEDTPAAGGSLSSPPQAVLFSLLEQQGEEQ
QQQQLQLQLQLQLQLQQQQQQQQQQQQQQQQQQQQQQRHQRRMTALGERL
EARTFVRGFLVEVRKDVISMLQEEGAFDGPDAVDAGSSIAPEEAVEAATV
KAVATATAATTTMAVAVELVAAAGASLAQVLREEELAGEDEAHKKEEEAE
QEGPHIDLSAANVKKNFLSATPSVTMFSASYEEEQKEQGDEEQQEQHPQI
GQDMVLPADDVSAIIEVQEHAAEGEKEIKVAELTFPDQQQEAMVLPVLLE
GDEDVKPGAQAEVVTLSLHSQLQPPFLHVLQEEEGGDDKEAQDEPILLEQ
EGEGLTVMERATAVAAAATDGKGNQQGQQQQEQQPSMLVLEPVEERKKAE
APVVAIEPGLIVTTAPAGEEKEEEEQQQEQQQEGEREEEEEEAAAFVLQA
DEEEKEKMASAVATAVVPEEDEEKEEKEEEEEKQQQPALEPRKKERGRKE
QRDEEEAGACGPLHAAAEAFEAVPSVDREEVLEAGAEADAGSMVEPTVVL
SSVLVEGGEEDQESSIRLEASGAGDATEEQKQEKDEDEGSSSNGKDRTVE
EAGLIEEE*
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Synonyms
Publications