NO19G00520, NO19G00520 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO19G00520 vs. NCBI_GenBank
Match: EWM23559.1 (putative wd repeat-containing [Nannochloropsis gaditana]) HSP 1 Score: 204.9 bits (520), Expect = 1.000e-48 Identity = 109/161 (67.70%), Postives = 122/161 (75.78%), Query Frame = 0 Query: 708 SSSSSLIISQAHARTVHTVRWHPTEPHLLLSAGLDQHLRLWDLRKAGGRE------GGSEPLTSYFGHVSSLVKKQVAITAPEFYDGGRYILITGEKSQRLSIYNTQTGQTISRGQLASDVTQMVALEEKGRREGEAGXXXXRTSLLVACRQGALVKLTPF 863 +SSS L+I AHARTVHTVRWHP+EPHLLLSAGLDQHLRLWDLRKAGGRE GG PL SYFGHVSSLV+KQ AITAPEFYD GRY+LITGEKS+RLS+Y T + + ISRGQL +DV+QM +E G R L VA RQG LVKL+PF Sbjct: 7 TSSSCLVIPHAHARTVHTVRWHPSEPHLLLSAGLDQHLRLWDLRKAGGREXXXXXXGG--PLCSYFGHVSSLVQKQSAITAPEFYDQGRYVLITGEKSRRLSVYETLSAKPISRGQLDADVSQMATMESPGME-----TKGKRPCLWVASRQGTLVKLSPF 160
BLAST of NO19G00520 vs. NCBI_GenBank
Match: GAQ92367.1 (hypothetical protein KFL_009950020 [Klebsormidium nitens]) HSP 1 Score: 158.7 bits (400), Expect = 8.200e-35 Identity = 93/269 (34.57%), Postives = 142/269 (52.79%), Query Frame = 0 Query: 559 SFRGHTGWVADVRFLTPCHPPPSSSPSVLLASAANDGVIKLWDIARVHPTTGMPKALASINNLHHKGIFSMDASADGLLLATGSKDATVGLLRVHNSGLVVERRLEDVHDSVVKCVRFSPQMDSQCLAIAGDDREIQVMDLRAPSSSLSSSSSSLIISQAHARTVHTVRWHPTEPHLLLSAGLDQHLRLWDLRKAGGREGGSEPLTSYFGHVSSLVKKQVAITAPEFYDGGRYILITGEKSQRLSIYNTQTGQTISRGQLASDVTQMVA 828 +++G GW++ V+FLT + LL +++ND + LWDI + +TG P+ +A +++H+ GIF M G +AT SKD TVG+ V +GL L H + V+ + F DS LA D + V DLR + SL I AH ++ V+WHPT HLL+SA D+ + L D+R +PL ++ GH+ + + +I P F GRY+ GE SQ +S+Y+ +G+T+SRG L D T +A Sbjct: 239 AWKGGNGWISAVQFLT----RQQQEGATLLLTSSNDRSVVLWDIDKTSNSTGTPRIVAETSSIHNNGIFGMHEL--GGKIATASKDKTVGITVVTEAGLEPVTVLSGHHSAAVRAIHF---RDSHHLADGSADCSVAVSDLRL------ADPGSLCIENAHNSAINVVQWHPTNEHLLMSASHDRGICLHDIRAT------QQPLFTFVGHLGPTLARSKSIYRPSFLGAGRYLASPGEGSQAISLYDVASGKTVSRGCLGFDATMTMA 486
BLAST of NO19G00520 vs. NCBI_GenBank
Match: PRW45201.1 (WD repeat-containing 32 [Chlorella sorokiniana]) HSP 1 Score: 157.5 bits (397), Expect = 1.800e-34 Identity = 119/347 (34.29%), Postives = 169/347 (48.70%), Query Frame = 0 Query: 489 DPALSAVYTLHLQPSXXXXXXXXXXXXXXXXXXXXXXAAGKQGRIAIFQTQARPCKXXXXXXXXXXXXXXSFRGHTGWVADVRFLTPC-HPPPSS-----SPSVLLASAANDGVIKLWDIARVHPTTG-------MPKALASINNLHHKGIFSMDASADGLLLATGSKDATVGLLRVHNS----GLVVERRLEDVHDSVVKCVRFSPQMDSQCLAIAGDDREIQVMDLRAPSSSLSSSSSSLIISQAHARTVHTVRWHPTEPHLLLSAGLDQHLRLWDLRKAGGREGGSEPLTSYFGHVSSLVKKQVAITAPEFYDGGRYILITGEKSQRLSIYNTQTGQTISRGQL 819 DPAL+ VY++ +P A GK G +A++ +R + S + H GWVADV+F+ P PSS + S+LL SA NDG + LWD+ + T G +P+ LA +LH GIFS+ A G +L T SKDA+V + + S L +R +D+H VVKC R+ D A G+DR + V D R P S+ SL I AHA ++ +RWHP++ HLLLS D + L D+R+ G +PL GH S + +I P F GG + + E+S +LS+Y T+TG ISRG + Sbjct: 134 DPALARVYSVDSRPG-------------------LVVAGGKDGIVAVW--GSRELEAGRLPTDEAVPPLLSHKLHKGWVADVQFVRGSGGPVPSSCGDGDTSSLLLLSAGNDGALCLWDLGKAAETGGGGQGGAVVPQCLARSTDLHSGGIFSL-AEHSGRVL-TASKDASVAISSLAGSSGTASLAAVQRYDDLHAGVVKCARW---RDGDTFASCGNDRRLCVADARQP----PSAGPSLAIEGAHATAINCLRWHPSDSHLLLSTSHDPAILLHDMRQPG------QPLHRLLGH--SPAARINSIYQPAFVAGGDAVAASCERSPQLSLYCTKTGAAISRGSI 442
BLAST of NO19G00520 vs. NCBI_GenBank
Match: CBJ28113.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 154.1 bits (388), Expect = 2.000e-33 Identity = 104/279 (37.28%), Postives = 149/279 (53.41%), Query Frame = 0 Query: 559 SFRGHTGWVADVRFLTPCHPPPSSSPSVLLASAANDGVIKLWDIARVHPTTGMPKALASINNLH--HKGIFSMDASADGLLLATGSKDATVGLLRVHNSGLVVERRLED------VHDSVVKCVRFSPQMDSQCLAIAGDDREIQVMDLRAPSSSLSSSSSSLIISQAHARTVHTVRWHPTEPHLLLSAGLDQHLRLWDLRKAGGREGGSEPLTSYFGHVSSLVKKQVAITAPEFYDGGR----YILITGEKSQRLSIYNTQTGQTISRGQLASDVTQM 826 +F+ H GWV+ VRFL LL S AND V+KLWD ++ H G P+ L+++++LH KGIF+MD + G +ATGSKD TV + + +G+ +R L D H+ VVK V D +A GDD ++V DLR SS S S + R HTVRWHP + + LLSAGLD + L+DLR+ + PL + GH + + AI PEF G I+ GE+S+ +S+Y+ +G T+SRG L + + + Sbjct: 578 NFKAHKGWVSAVRFLEGGGAGAGVGGCRLLTS-ANDSVVKLWDTSKQH--RGTPRLLSTMDDLHPTRKGIFAMD--SHGTRVATGSKDTTVAIASLRPTGIERDRVLGDPGGSEAFHEKVVKGVSL---RDENTVASCGDDSNVRVSDLR---SSSSVGVSQRLDGVHGGRACHTVRWHPLDDNRLLSAGLDSTVNLYDLRRL------AAPLHVFRGHCPYALARPKAIHRPEFLPSGGGNSVNIITCGERSENISMYDAGSGGTVSRGLLGDEASAL 839
BLAST of NO19G00520 vs. NCBI_GenBank
Match: PSC70328.1 (WD repeat-containing 32 [Micractinium conductrix]) HSP 1 Score: 144.4 bits (363), Expect = 1.600e-30 Identity = 108/348 (31.03%), Postives = 156/348 (44.83%), Query Frame = 0 Query: 488 SDPALSAVYTLHLQPSXXXXXXXXXXXXXXXXXXXXXXAAGKQGRIAIFQTQARPCKXXXXXXXXXXXXXXSFRGHTGWVADVRFLTPCHPPPSSSPS---------VLLASAANDGVIKLWDIARVHPTTG----MPKALASINNLHHKGIFSMDASADGLLLATGSKDATVGL------LRVHNSGLVVERRLEDVHDSVVKCVRFSPQMDSQCLAIAGDDREIQVMDLRAPSSSLSSSSSSLIISQAHARTVHTVRWHPTEPHLLLSAGLDQHLRLWDLRKAGGREGGSEPLTSYFGHVSSLVKKQVAITAPEFYDGGRYILITGEKSQRLSIYNTQTGQTISRG 817 SDPAL+ Y++ +P A GK G ++++ +R + S + H GW+A+V+FL+ S + L +A NDG + LWD+ R G +P+ LA +LH GIFS+ LL T +KDA+V + R + L V R ED+H VVKC R+ D C A G+DR + V+D R P +S+ I AH ++ +RWHP+E HLLLS+ D + DLR G +PL GH + +I P + GG + E+S LS+Y T+TG ISRG Sbjct: 54 SDPALARAYSITWRPG-------------------LVAAGGKDGVVSVW--GSREAEAGTLAANAAVPPLLSGKLHKGWIAEVQFLSAACGNASXXXXXXXXXXXXLLRLLTAGNDGTVGLWDLGRAAEAGGRGGLVPQCLARATDLHSGGIFSLHERGGRLL--TAAKDASVAISSLGEGSRAGGAALTVLHRYEDLHSGVVKCARW---RDDHCFASCGNDRRLVVVDSRQP----TSTGPCFAIEGAHGSAINCLRWHPSEQHLLLSSSHDPAALVQDLRSPG------QPLHRLLGHAQG--ARVGSIYQPAWVAGGAAVATGCERSTLLSLYCTRTGAAISRG 363
BLAST of NO19G00520 vs. NCBI_GenBank
Match: XP_024583146.1 (Nucleosome remodeling factor, subunit CAF1/NURF55/MSI1 [Plasmopara halstedii] >CEG46777.1 Nucleosome remodeling factor, subunit CAF1/NURF55/MSI1 [Plasmopara halstedii]) HSP 1 Score: 135.6 bits (340), Expect = 7.400e-28 Identity = 92/271 (33.95%), Postives = 141/271 (52.03%), Query Frame = 0 Query: 559 SFRGHTGWVADVRFLTPCHPPPSSSPSVLLASAANDGVIKLWDIARVHPTTGMPKALASINNLHHKGIFSMDASADGLLLATGSKDATVGL--LRVHNSGLVVERRLEDVHDSVVKCVRFSPQMDSQCLAIAGDDREIQVMDLRAPSSSLSSSSSSLIISQAHARTVHTVRWHPTEPHLLLSAGLDQHLRLWDLRKAGGREGGSEPLTSYFGHVSSLVKKQVAITAPEFYDGGRYILITGEKSQRLSIYNTQTGQTISRGQLASDVTQMVA 828 SF+ H GW+A + F + LL + +ND +KLWD+ + PK + +I NLH KGIF +D + ++ T SKD T+ L LR S LV+++R ++ H+ VVKCVRFS Q A G+DR ++V D+R L SS+ ++I H+R +++V++HPT +L+LSAG D ++D+R P+ +Y + +S AI P F G I+ E L++Y T G IS G + T + A Sbjct: 299 SFKAHNGWIAALSFAQGIQERTN-----LLFTVSNDASLKLWDLNYYSHVSKTPKEVFTITNLHEKGIFGLDVKENSII--TCSKDTTIALSQLRTDTSLLVIKQRFKE-HEGVVKCVRFS-HCHPQLFASGGNDRVLRVHDVR-----LGPSSTVVMIPSVHSRAINSVQFHPTNDNLVLSAGFDPDFYMFDVRNT------LAPVCTYRQYNNS----TAAIFHPLFIGDGSKIVAAREHD--LTLYRTSDGDVISCGYIDKPATCIAA 543
BLAST of NO19G00520 vs. NCBI_GenBank
Match: XP_020532242.1 (uncharacterized protein LOC110008556 [Amborella trichopoda] >ERM96571.1 hypothetical protein AMTR_s00001p00269830 [Amborella trichopoda]) HSP 1 Score: 134.0 bits (336), Expect = 2.200e-27 Identity = 88/273 (32.23%), Postives = 136/273 (49.82%), Query Frame = 0 Query: 559 SFRGHTGWVADVRFLTPCHPPPSSSPSVLLASAANDGVIKLWDIARVHPTTGMPKALASINNLHHKGIFSMDASADGLLLATGSKDATVGLLRVHNS--GLVVERRLEDVHDSVVKCVRFSPQMDSQCLAIAGDDREIQVMDLRAPSSSLSSSSSSLIISQAHARTVHTVRWHPTEPHLLLSAGLDQHLRLWDLRKAGGREGGSEPLTSYFGHVSSLVKKQVAITAPEFYDGGRYILITGEKSQRLSIYNTQTGQTISRGQLASDVTQMVALE 830 S++ WV+ V F+ +LL S+ +DG I +WD+ + P+ + ++H G+FSMD D T SKD++V L R+ +S G+V+ERR+ H V+ + F D LA G D I ++D R +S SL I H+ V+ +W P+ +LLSA D +L L+D+R S+PL GHVS+ ++ I P F D G+ + G+ S+ +S+YN TG+ ISRG + D M +E Sbjct: 277 SWKCGMSWVSGVEFV--------DENPMLLVSSCDDGGIVVWDVRKRICGGCSPQMVGESRDVHSSGVFSMDHMKDS--YGTASKDSSVALCRLSSSGGGMVIERRISGHHCGPVRGISF---RDVNVLADCGADGRICILDKR-----MSEQPCSLFIDSDHSTGVNMAKWCPSNESILLSASKDPYLLLYDIR------APSQPLHKLEGHVSANIRTCYRIYKPVFIDNGKAVATPGQGSRNISLYNVDTGKAISRGVIGYDANIMKYIE 525
BLAST of NO19G00520 vs. NCBI_GenBank
Match: XP_008791652.1 (PREDICTED: peroxisomal targeting signal 2 receptor-like [Phoenix dactylifera]) HSP 1 Score: 131.3 bits (329), Expect = 1.400e-26 Identity = 90/271 (33.21%), Postives = 139/271 (51.29%), Query Frame = 0 Query: 559 SFRGHTGWVADVRFLTPCHPPPSSSPSVLLASAANDGVIKLWDIAR--VHPTTGMPKALASINNLHHKGIFSMDASADGLLLATGSKDATVGLLRVHNSG-LVVERRLEDVHDSVVKCVRFSPQMDSQCLAIAGDDREIQVMDLRAPSSSLSSSSSSLIISQAHARTVHTVRWHPTEPHLLLSAGLDQHLRLWDLRKAGGREGGSEPLTSYFGHVSSLVKKQVAITAPEFYDGGRYILITGEKSQRLSIYNTQTGQTISRGQLASDVTQMV 827 S++G W++ V+F+ +L+ S++NDG + +WDI R ++ P +A LH GIF+MD G +AT SKD++VG+ R+ +G LV ER++ H V++ V F ++ LA G D I V+D R P +L I H+ V+TV W T LLLSA D L L+D+R + G P+ GHV S ++ I P F +GG+ I G+ S+++S+Y+ G IS+G + D +V Sbjct: 2 SWKGSWSWISGVKFV--------EDNPMLMVSSSNDGCVVVWDIKRQPALSSSWSPPVVAKSMELHAGGIFAMDRL--GCSIATASKDSSVGISRLTPAGELVTERQVAGHHSGVIRAVCFGDNVNK--LADCGADGCICVLDTRLP------EPCALTIKSEHSTGVNTVEW-CTRKSLLLSASKDPTLHLYDVRHSAG------PVLKLEGHVESNIRSCYQIYRPCFVEGGKTIATPGQGSRKISLYDVDGGTMISQGMIGYDANLVV 247
BLAST of NO19G00520 vs. NCBI_GenBank
Match: XP_019705581.1 (PREDICTED: uncharacterized protein LOC105043567 [Elaeis guineensis]) HSP 1 Score: 131.3 bits (329), Expect = 1.400e-26 Identity = 88/271 (32.47%), Postives = 139/271 (51.29%), Query Frame = 0 Query: 559 SFRGHTGWVADVRFLTPCHPPPSSSPSVLLASAANDGVIKLWDIAR--VHPTTGMPKALASINNLHHKGIFSMDASADGLLLATGSKDATVGLLRVHNSG-LVVERRLEDVHDSVVKCVRFSPQMDSQCLAIAGDDREIQVMDLRAPSSSLSSSSSSLIISQAHARTVHTVRWHPTEPHLLLSAGLDQHLRLWDLRKAGGREGGSEPLTSYFGHVSSLVKKQVAITAPEFYDGGRYILITGEKSQRLSIYNTQTGQTISRGQLASDVTQMV 827 S++G W++ V F+ +L+ S++NDG + +WDI + ++ P +A + LH GIF+MD G +AT SKD++VG+ R+ +G LV ER++ H V++ V F ++ LA G D I V+D R P +L I H+ ++TV W T LLLSA D L L+D+R + G P+ GHV S + I P F +GG+ I G+ S+++S+Y+ +G IS+G + D +V Sbjct: 224 SWKGSWSWISGVNFV--------EDNPMLMVSSSNDGFVVVWDITKQPALSSSCSPPVVAKLMELHAGGIFAMDRL--GCSIATASKDSSVGISRLTPAGKLVAERKVTSHHSGVIRGVCFGDDVNK--LADCGADGCICVLDTRLP------EPCALTIKSEHSTGINTVEW-CTRKSLLLSASKDPTLHLYDVRNSAG------PVLKLEGHVESTTRSCYQIYRPCFVEGGKTIATPGQGSRKISLYDVDSGTMISQGMIGYDANLVV 469
BLAST of NO19G00520 vs. NCBI_GenBank
Match: XP_009525753.1 (hypothetical protein PHYSODRAFT_498206 [Phytophthora sojae] >EGZ16695.1 hypothetical protein PHYSODRAFT_498206 [Phytophthora sojae]) HSP 1 Score: 129.8 bits (325), Expect = 4.100e-26 Identity = 98/276 (35.51%), Postives = 141/276 (51.09%), Query Frame = 0 Query: 562 GHTGWVADVRFLTPCHPPPSSSPSV--------LLASAANDGVIKLWDIARVHPTTGMPKALASINNLHHKGIFSMDASADGLLLATGSKDATVGL--LRVHNSGLVVERRLEDVHDSVVKCVRFSPQMDSQCLAIAGDDREIQVMDLRAPSSSLSSSSSSLIISQAHARTVHTVRWHPTEPHLLLSAGLDQHLRLWDLRKAGGREGGSEPLTSYFGHVSSLVKKQVAITAPEFYDGGRYILITGEKSQRLSIYNTQTGQTISRGQLASDVTQMVA 828 GH G V+ F H P V L++ A+ G LWD+ + PK + + NLH KGIF MD S D +L T SKDATV L R +S L V RR E H+ VVKC RF+ ++ A G+DR ++V D+R +S+ + + I A +R +++V++HPT+ +LLLSAG D ++DLRKA S P+ ++ S + AI P F GG ++ + Q LS+Y T G ISRG ++ T + A Sbjct: 158 GHGGHVSIFPFSNSYHQPEIVDGFVDDPGAHIPLMSFKAHSG--WLWDLNKSSDMLRTPKEVFACTNLHQKGIFGMDVSGDSVL--TCSKDATVALSKFRGDSSPLEVVRRFEG-HEGVVKCARFA-NVNPYVFASGGNDRSVRVFDVR-----VSTDPNVIRIDGAQSRAINSVQFHPTDDNLLLSAGFDPDFFMFDLRKA------SAPVCTF--RKSPQSRDSKAIFHPVFVCGGHGVV--AARGQDLSLYRTSDGAAISRGYISDAATCIAA 412 The following BLAST results are available for this feature:
BLAST of NO19G00520 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO19G00520 ID=NO19G00520|Name=NO19G00520|organism=Nannochloropsis oceanica|type=gene|length=3705bpback to top protein sequence of NO19G00520.1 >NO19G00520.1-protein ID=NO19G00520.1-protein|Name=NO19G00520.1|organism=Nannochloropsis oceanica|type=polypeptide|length=863bpback to top Synonyms
Publications
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