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Properties
| Property Name | Value |
|---|
| Description | Unknown protein |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| chr18 | genome | chr18:859531..863534 + |
Analyses
This gene is derived from or has results from the following analyses
Homology
BLAST of NO18G02640 vs. NCBI_GenBank
Match: EWM23467.1 (hypothetical protein Naga_100651g1, partial [Nannochloropsis gaditana]) HSP 1 Score: 134.4 bits (337), Expect = 7.400e-28 Identity = 95/185 (51.35%), Postives = 122/185 (65.95%), Query Frame = 0
Query: 11 PFP-SHGQG----SIHVQYPSA-----PSDASFVSSYPA---SSLPVIPEAEREESEESYWRRAREG---GRVHLGGRKMMPQQQEDHGYLTS--THMINKQEVNINQQQQSLAQEAATRQREIEEGMQALRGRIQAIDDKIKRASRERATAATRLQAKLEGKVKGLRTEWDGRIEEHFDWIAKE 178
P P S+GQG H QYPS P+ AS YP+ SS+PVIPE ER ESEE R R G G GR+ PQ +D G+L S +H INK EV+I QQQ+SLA+E A R+RE+EE +QAL RI AID+KI+R +RERA+ A+RLQ K+ +V+GL+ EW+G++EE+FDWI KE
Sbjct: 6 PLPTSYGQGYAHSGQHTQYPSPAFPAFPTAASTSRPYPSTTFSSMPVIPEVER-ESEEDAAGRGRGGIYSGMAGDDGRR-KPQMYQD-GFLASSTSHTINKHEVSIAQQQRSLAEETAIRRREMEEEIQALHKRIYAIDEKIQRTARERASTASRLQQKIGSRVEGLQKEWEGKVEENFDWILKE 187
BLAST of NO18G02640 vs. NCBI_GenBank
Match: XP_005854762.1 (hypothetical protein NGA_0380100 [Nannochloropsis gaditana CCMP526] >EKU21597.1 hypothetical protein NGA_0380100 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 98.2 bits (243), Expect = 5.900e-17 Identity = 49/72 (68.06%), Postives = 58/72 (80.56%), Query Frame = 0
Query: 274 LRALEADIRAPQLELVDGEEGFQQQVKTTLRELYDGVAIEAQAREEEDCLVLDSMLESQKALQRIILENYGG 346
L +E +R+PQ ++ E FQ VK TLREL DG+AIEAQAREEEDCLVLD+MLE+QK+LQRIILENYGG
Sbjct: 87 LDGIETAVRSPQESFLEEMESFQHHVKRTLRELCDGIAIEAQAREEEDCLVLDAMLEAQKSLQRIILENYGG 158
The following BLAST results are available for this feature:
Relationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO18G02640 ID=NO18G02640|Name=NO18G02640|organism=Nannochloropsis oceanica|type=gene|length=4004bp
TCATCGATGGACAAGCATGCGGAAGGAAAGGGTGATGGCTTGATTTATTC
TCCTTGGCATGCTGCAGCCTTTCTCTCTGCAGCATTTTGCGAAGTCTCTC
TCGAACAGCAACTGATGAGATATTTGATAGACAGATGCCTGAAGCCGCAA
TCAAGGCTGAAATCATCTTGTCTGGCATAGATCATACCACTTACAGGTTG
CAATGGCGTCATCAATGACGTACTCGCTTCAGTCTCTTCAATTTACTTAC
CCACTTCTCTCCGACCCGCACTGATTCCCACGTATCTCCGTGTCTACCTT
TGGATAAAAGTTGCTCTCGATGGGTATAACATTTGGGTTATTCTCCTCTA
CAGCCTCAACATGCGAGAGAAGCAGCAGACAAAACAGAAAGAAAGTCCTA
CGCCCAGTCTCGAGTGCTTCCGCTCTTTTCCTACACCCTCATCCTCTTGC
TACCCGCTCTTGGCTTGCTTCTTTGCTTTCCCGTTAACCAATATTTTGGG
AGCGTCTTGCAGGGAGGATGAGCCTTTCTCTCTTTCCCGGTCCTGCATTT
CGTCCGGTAGTATGCCTACCTCGGATTAGCGAACAATAAAGCAATTGAGA
AGAGGCGGGAGGAAAATTAGATTAAGAGAATAAGACAGCAGACGCAAAAG
GAAAAGATGAGATATGGAAAGCAGTAGAAAAGGAAAAAAATAAAAGAGAA
ACAGGGGAAAACTGGGTTCACCGATATTTTGCGGGGACAAGATCTCCAAT
CTACTCCCTCGACTATTCCTCCTTGGCCACACATGCGCACGAATATCCAA
TCCTGCTTGGTGAGGTCATAGTCTGGGGAAGGAAACTATAGCTGTGACAG
AGCTCCAGAAGGAGGTTGGCTTAATGACGAATTATTATACGCCTGAATGA
TTCGCGTACACACTCCCATTCCTAACCATCCATTGCCTCCCCGAAATACA
TGTCAATGTCCTAACCATCCATAGTCTCCCCGTAATATCTATCAATAAAT
ATAAAGACCCTATCAAATATTTCGATGTATTCAAGGGCTTAATCATGCTC
AATATGCTTAATTATCGAACATATTTGAAATCCTTCTTATTTTTTGTGAG
TGCCTGCGTCTTTATTTTGATGTGAGGAAAGTATGTCCCCAACAAACCCC
AAAAAAGATCCTTATGATGCTTGGTATTTGTGGAGCCGCTGCTTTATGGC
GCTGCTAGAGGATGGGCAAGAATGCCCCTCACCGCAACGGGCATCGTATC
GTCCCTGACATCATCAGACCACACACCTCATCCCACCCGGAGGAGGATGG
CTGAAACGCTTGCGCCCGTGCTGCCAACACAACCCTTATATTGCATGAGT
GTCACGCCCGCACTCAATTACAACACACACACACACACACATACATATTC
ATCTACATCTACACAGCGTGTGCAGACCTCCTCGACCGTCGTGCCCTTCT
TCTCCTCGTTTGAGCTCTCATCACTCAAGCATCGTCGCCAACCTCAACGC
CGCATCGCTCATACACACACGCGCCCAGGGAGGGAGCTGAGATGCAGCAG
CAACAGCAGCATTACGCTCCCCCTTTTCCTTCGCACGGCCAGGGCAGTAT
TCACGTGCAATATCCCTCCGCTCCTTCGGATGCTTCGTTCGTGTCCTCCT
ACCCTGCCTCTAGCCTGCCCGTCATACCGGAAGCAGAGCGCGAGGAGAGC
GAGGAGAGCTATTGGAGGCGAGCGAGAGAGGGAGGCAGGGTACACTTAGG
GGGACGCAAGATGATGCCGCAGCAGCAGGAAGAgtgagttgtagtgtgtg
ctctgtgtgagggtggctgtgggtgcgtcttcaacgtcatctccctcctc
ccatgaatgacgcatgcattataagcgcccttctttacgtctctttcctc
actctcctcccctctcttccgccttcctacattccgatcacagTCACGGC
TACTTGACTTCCACCCACATGATTAATAAGCAAGAAGTGAATATCAACCA
ACAACAACAGTCGCTGGCCCAGGAGGCGGCGACGAGGCAGAGGGAGATAG
AGGAAGGGATGCAGgtagggagagaatgaagcagggtgtgtggagggtgc
aagggccagggttgaggatgatttttaactcacgttcgcaataaatcttg
gtattgtacaccaaagGCATTACGAGGTCGCATCCAAGCCATCGACGACA
AGgtacgtccttcaggccctccctccctccctccctccccccctccctcc
ctccctctgacactccctctgacgcccgcctccctccttccctcgctttc
tctttccctccctctgacactccctttgacgcccccctccctccgtccct
tcacccctcctagATAAAGCGTGCGTCCCGGGAGCGCGCCACAGCCGCCA
CCCGGCTGCAAGCCAAGTTGGAGGGGAAGGTAAAGGGGCTGCGGACGGAA
TGGGACGGGCGAATCGAAGAGCACTTTGACTGGATCGCAAAGGAGgtagg
tagggaggtagggaggtagggaggtagggagggagggagaggggcaggag
gttgggggcgaggaagaatagactgtgtcatactcgagggggtgcatttc
taatcctccctccctctcgccttcccttcctttctcagGCTCTTCCTCCT
CTGACCTCTCGCCTCCTCGAGGTCGAAGACAGCACGCGTCACTTCGCGCA
TTCCGTGCTTCCTCCTGCCATCGAGGCGACCCTTCTCCTGGAGGGAGGGA
GGGAGGCAGGGAGGGAGGGAGGGAGGGAGGGAGGGGTAGAGGCAATGAGA
AGGGCGTGGGAGACGGAGAAAAACAAAGTGATGAAACGgtgggtgggggg
gagagagggagggagggaaggagggaggaagaagaatgaaggtgggatgc
atttcttccactttccttacgcataccctccctccctccctccctccctc
cctccctccctccctacctccctcttctccctcacaacagAGAGCAGCGG
ATCGAGCAGCGTCTGGCTGAGCACGTGGAGAAGACGGCTTCGGAGTTCGA
GAGAGAGACAGGCACAAGGCTCGgtgcggagggaggaagggaaggaggga
cgggttgaatgaatacaaatatcatcgtccatgcgtccctcatgtttcgc
tcccttgcctcctccccttcctccctcccctcctccttccctaccttctt
ccctagCTGCTCTTCGTGCCCTCGAGGCTGACATCCGCGCCCCTCAACTG
GAGCTCGTGGACGGAGAGGAAGGCTTTCAGCAGCAAGTCAAGACGACGCT
CAGAGgtggggagggagggagggaaagagaggggagggaggaggattgtc
cttggttcacgaatgattcagattgactttccccgccctcgttccttcat
tccttccttccttcgtttcttccttccctccctccccccttcctgcagAG
CTGTACGACGGCGTGGCGATCGAGGCCCAGGCCCGTGAAGAGGAAGACTG
CCTCGTGCTTGACTCCATGCTGGAGTCCCAGAAGGCCCTGCAGAGAATCA
TTCTAGAAAACTACGGGGGAGGGAGGGGAGCAGTAGGAGGAGGAGGAGTA
GGAGTAGGAGGGGGCTCGTTCTTTTTGAGGCTCGAGTCGTGTGGGGAGGG
AAGGAGTCATGAGGAGGATGAGGAAGGGGTGGAGGAATGGGAGAGGTGAG
GGAAGAAGGGAAGAAGGGAAGGAGGGAAGGGCGAATGTATTTTAAGTCGG
GCCATGGACTGACCATGGTGGCTAGGTGGAGTTAGAAAGTGGATGCGTGC
GTTAGGCAGCACACGCACACGGAGGAACCAAACCAAAACAACAGCTTCTA
CGACGAAGGCAAGAAATGTAGATCGGAAGAATACACAGGGATAAAAGAAA
TAGCTGATTCGAACCCACCGCATTCACTTAAGAAGAAGGGGACTACTTTA
TTCAGGAAAGAAAGATGCACATGGGCCAGTCGCAGTGCGTCTCACACAGT
AGCC back to topprotein sequence of NO18G02640.1 >NO18G02640.1-protein ID=NO18G02640.1-protein|Name=NO18G02640.1|organism=Nannochloropsis oceanica|type=polypeptide|length=388bp
MQQQQQHYAPPFPSHGQGSIHVQYPSAPSDASFVSSYPASSLPVIPEAER
EESEESYWRRAREGGRVHLGGRKMMPQQQEDHGYLTSTHMINKQEVNINQ
QQQSLAQEAATRQREIEEGMQALRGRIQAIDDKIKRASRERATAATRLQA
KLEGKVKGLRTEWDGRIEEHFDWIAKEALPPLTSRLLEVEDSTRHFAHSV
LPPAIEATLLLEGGREAGREGGREGGVEAMRRAWETEKNKVMKREQRIEQ
RLAEHVEKTASEFERETGTRLAALRALEADIRAPQLELVDGEEGFQQQVK
TTLRELYDGVAIEAQAREEEDCLVLDSMLESQKALQRIILENYGGGRGAV
GGGGVGVGGGSFFLRLESCGEGRSHEEDEEGVEEWER* back to top
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