NO18G02290, NO18G02290 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO18G02290 vs. NCBI_GenBank
Match: XP_008615989.1 (hypothetical protein SDRG_11718 [Saprolegnia diclina VS20] >EQC30663.1 hypothetical protein SDRG_11718 [Saprolegnia diclina VS20]) HSP 1 Score: 134.8 bits (338), Expect = 1.900e-27 Identity = 67/148 (45.27%), Postives = 98/148 (66.22%), Query Frame = 0 Query: 665 VRCATAAHSHALLTLGFSSGCWAWEFQLAEDITNDESICLGAAVKPLTSSSYNSSPSLWMYRCYNGNLYRRGGQVSGVSKARIHPQDVVRIELDHEKRTLSYSINGDKDQGVCFSEVTG-EIFPAVAFYGANRAVRLLGMESLGPGIR 812 VR ++ HAL+ +SG +W+F+L D +DE C GAA+ P+T S Y+SSPSLWM R YNGNLY RG ++S S ++HP D V+I++D T++YSING D GV F++++G E++PAV+FYG+ + + LL + G R Sbjct: 518 VRTRETSYQHALVNAPIASGKASWKFRLDNDTADDEMTCFGAAILPVTVSGYDSSPSLWMLRGYNGNLYARGHKLSR-SIGKVHPGDTVQIDVDMTAGTMAYSING-TDFGVVFTDLSGHEVYPAVSFYGSGKVISLLSLHKWGETTR 663
BLAST of NO18G02290 vs. NCBI_GenBank
Match: XP_008615990.1 (hypothetical protein, variant [Saprolegnia diclina VS20] >EQC30664.1 hypothetical protein, variant [Saprolegnia diclina VS20]) HSP 1 Score: 134.8 bits (338), Expect = 1.900e-27 Identity = 67/148 (45.27%), Postives = 98/148 (66.22%), Query Frame = 0 Query: 665 VRCATAAHSHALLTLGFSSGCWAWEFQLAEDITNDESICLGAAVKPLTSSSYNSSPSLWMYRCYNGNLYRRGGQVSGVSKARIHPQDVVRIELDHEKRTLSYSINGDKDQGVCFSEVTG-EIFPAVAFYGANRAVRLLGMESLGPGIR 812 VR ++ HAL+ +SG +W+F+L D +DE C GAA+ P+T S Y+SSPSLWM R YNGNLY RG ++S S ++HP D V+I++D T++YSING D GV F++++G E++PAV+FYG+ + + LL + G R Sbjct: 518 VRTRETSYQHALVNAPIASGKASWKFRLDNDTADDEMTCFGAAILPVTVSGYDSSPSLWMLRGYNGNLYARGHKLSR-SIGKVHPGDTVQIDVDMTAGTMAYSING-TDFGVVFTDLSGHEVYPAVSFYGSGKVISLLSLHKWGETTR 663
BLAST of NO18G02290 vs. NCBI_GenBank
Match: CBJ26296.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 134.0 bits (336), Expect = 3.300e-27 Identity = 68/167 (40.72%), Postives = 101/167 (60.48%), Query Frame = 0 Query: 640 LRSAAFDPDEMSPSGLSLPQPDHLLVRCATAAHSHALLTLGFSSGCWAWEFQLAEDITNDESICLGAAVKPLTSSSYNSSPSLWMYRCYNGNLYRRGGQVSGVSKARIHPQDVVRIELDHEKRTLSYSINGDKDQGVCFSEVTGEIFPAVAFYGANRAVRLLGMESL 807 +R AAFDP +S + + + L+ A H+H+LL G W+WE L + + DE+ C+G AV P+T+S Y S +WM RCY+G Y GG+ + V++ +IHP D VR+ L+ E TL+ +NG DQGV FS V E+ PAV FYG ++VRL+ ++ + Sbjct: 392 IRDAAFDP-ALSSKWVVVSEAGQLVSSAADNGHTHSLLHQCLRRGTWSWELALERESSGDETTCVGVAVNPVTNSCYEDSHQMWMVRCYSGETYSNGGRRNRVTR-KIHPLDSVRLTLNCECGTLNLEVNG-VDQGVVFSNVPPEVHPAVCFYGVAKSVRLVELKRI 555
BLAST of NO18G02290 vs. NCBI_GenBank
Match: XP_009534720.1 (hypothetical protein PHYSODRAFT_361866 [Phytophthora sojae] >EGZ09859.1 hypothetical protein PHYSODRAFT_361866 [Phytophthora sojae]) HSP 1 Score: 133.3 bits (334), Expect = 5.600e-27 Identity = 65/142 (45.77%), Postives = 98/142 (69.01%), Query Frame = 0 Query: 663 LLVRCATAAHSHALLTLGFSSGCWAWEFQLAEDITNDESICLGAAVKPLTSSSYNSSPSLWMYRCYNGNLYRRGGQVSGVSKARIHPQDVVRIELDHEKRTLSYSINGDKDQGVCFSEVTG-EIFPAVAFYGANRAVRLLGM 804 L+VR ++ +A + G SSG +W+F+L D +DE C GAA+ P+T S Y+SSPSLWM R YNGNLY RG ++S + ++HP D+V++++D + TL+Y ING D GV F+++ G E+ PAV+FYG+ + + LLG+ Sbjct: 1317 LVVRTRETSYQYAAVNCGISSGKASWKFRLDTDTQDDEMTCFGAAILPVTVSGYDSSPSLWMLRGYNGNLYARGHKLSR-TIGKVHPGDIVQVDVDMGEGTLAYKING-TDYGVVFTDLAGHEVHPAVSFYGSGKVITLLGV 1456
BLAST of NO18G02290 vs. NCBI_GenBank
Match: OQR88385.1 (HECT E3 ubiquitin ligase, partial [Thraustotheca clavata]) HSP 1 Score: 133.3 bits (334), Expect = 5.600e-27 Identity = 65/144 (45.14%), Postives = 97/144 (67.36%), Query Frame = 0 Query: 665 VRCATAAHSHALLTLGFSSGCWAWEFQLAEDITNDESICLGAAVKPLTSSSYNSSPSLWMYRCYNGNLYRRGGQVSGVSKARIHPQDVVRIELDHEKRTLSYSINGDKDQGVCFSEVTG-EIFPAVAFYGANRAVRLLGMESLG 808 VR ++ HAL+ S+G +W+F+L D +DE C GAA+ P+T S Y+SSPSLWM R YNGNLY RG ++S S ++HP D+V+I++D T+SY+ING + GV F+++ G E++PAV+FYG+ + + LL + G Sbjct: 506 VRTRETSYQHALVNSPISTGKASWKFRLDNDTADDEMTCFGAAILPVTVSGYDSSPSLWMLRGYNGNLYARGHKLSR-SIGKVHPGDIVQIDVDMSAGTMSYAING-TEFGVVFTDLAGHEVYPAVSFYGSGKVITLLSLHKWG 647
BLAST of NO18G02290 vs. NCBI_GenBank
Match: XP_012195771.1 (hypothetical protein SPRG_22093 [Saprolegnia parasitica CBS 223.65] >KDO33608.1 hypothetical protein SPRG_22093 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 132.9 bits (333), Expect = 7.300e-27 Identity = 65/144 (45.14%), Postives = 96/144 (66.67%), Query Frame = 0 Query: 665 VRCATAAHSHALLTLGFSSGCWAWEFQLAEDITNDESICLGAAVKPLTSSSYNSSPSLWMYRCYNGNLYRRGGQVSGVSKARIHPQDVVRIELDHEKRTLSYSINGDKDQGVCFSEVTG-EIFPAVAFYGANRAVRLLGMESLG 808 VR ++ HAL+ +SG +W+F+L D +DE C GAA+ P+T S Y+SSPSLWM R YNGNLY RG ++S S ++HP D V+I++D T++YSING D G+ F+++ G E++PAV+FYG+ + + LL + G Sbjct: 517 VRTRETSYQHALVNAPIASGKASWKFRLDNDTADDEMTCFGAAILPVTVSGYDSSPSLWMLRGYNGNLYARGHKLSR-SIGKVHPGDTVQIDVDMTAGTMAYSING-TDFGIVFTDLCGHEVYPAVSFYGSGKVISLLSLHKWG 658
BLAST of NO18G02290 vs. NCBI_GenBank
Match: OQR82728.1 (HECT E3 ubiquitin ligase [Achlya hypogyna]) HSP 1 Score: 132.1 bits (331), Expect = 1.200e-26 Identity = 65/144 (45.14%), Postives = 97/144 (67.36%), Query Frame = 0 Query: 665 VRCATAAHSHALLTLGFSSGCWAWEFQLAEDITNDESICLGAAVKPLTSSSYNSSPSLWMYRCYNGNLYRRGGQVSGVSKARIHPQDVVRIELDHEKRTLSYSINGDKDQGVCFSEVTG-EIFPAVAFYGANRAVRLLGMESLG 808 VR ++ HAL+ ++G +W+F+L D +DE C GAA+ P+T S Y+SSPSLWM R YNGNLY RG ++S S ++HP DVV+I++D T++Y+ING D GV F+++ G E++PAV+FYG+ + + LL + G Sbjct: 523 VRTRETSYQHALVNAPITAGKASWKFRLDNDTADDEMTCFGAAILPVTVSGYDSSPSLWMLRGYNGNLYARGHKLSR-SIGKVHPGDVVQIDVDLTAGTMAYAING-VDFGVVFTDLAGHEVYPAVSFYGSGKVITLLSLHKWG 664
BLAST of NO18G02290 vs. NCBI_GenBank
Match: XP_008908970.1 (hypothetical protein PPTG_13259 [Phytophthora parasitica INRA-310] >ETN05906.1 hypothetical protein PPTG_13259 [Phytophthora parasitica INRA-310]) HSP 1 Score: 131.7 bits (330), Expect = 1.600e-26 Identity = 63/142 (44.37%), Postives = 98/142 (69.01%), Query Frame = 0 Query: 663 LLVRCATAAHSHALLTLGFSSGCWAWEFQLAEDITNDESICLGAAVKPLTSSSYNSSPSLWMYRCYNGNLYRRGGQVSGVSKARIHPQDVVRIELDHEKRTLSYSINGDKDQGVCFSEVTG-EIFPAVAFYGANRAVRLLGM 804 ++VR ++ +A + G SSG +W+F+L D +DE C GAA+ P+T + Y+SSPSLWM R YNGNLY RG ++S + ++HP D+V++++D + TL+Y ING D GV F+++ G E+ PAV+FYG+ + + LLG+ Sbjct: 546 IVVRTRETSYQYAAVNCGISSGKASWKFRLDTDTQDDEMTCFGAAILPVTVNGYDSSPSLWMLRGYNGNLYARGHKLSR-TIGKVHPGDIVQVDIDMGEGTLAYKING-TDYGVVFTDLVGHEVHPAVSFYGSGKVITLLGV 685
BLAST of NO18G02290 vs. NCBI_GenBank
Match: XP_002998555.1 (HECT E3 ubiquitin ligase, putative [Phytophthora infestans T30-4] >EEY69908.1 HECT E3 ubiquitin ligase, putative [Phytophthora infestans T30-4]) HSP 1 Score: 131.7 bits (330), Expect = 1.600e-26 Identity = 63/142 (44.37%), Postives = 98/142 (69.01%), Query Frame = 0 Query: 663 LLVRCATAAHSHALLTLGFSSGCWAWEFQLAEDITNDESICLGAAVKPLTSSSYNSSPSLWMYRCYNGNLYRRGGQVSGVSKARIHPQDVVRIELDHEKRTLSYSINGDKDQGVCFSEVTG-EIFPAVAFYGANRAVRLLGM 804 L+VR ++ +A + G SSG +W+F+L D +DE C GAA+ P+T + Y+SSPSLWM R YNGNLY RG +++ + ++HP D+V++++D + TL+Y ING D GV F+++ G E+ PAV+FYG+ + + LLG+ Sbjct: 491 LVVRTRETSYQYAAVNCGISSGKASWKFRLDTDTQDDEMTCFGAAILPVTVNGYDSSPSLWMLRGYNGNLYARGHKLNR-TIGKVHPGDIVQVDIDLSEGTLAYKING-TDYGVVFTDLAGHEVHPAVSFYGSGKVITLLGV 630
BLAST of NO18G02290 vs. NCBI_GenBank
Match: ETI42220.1 (hypothetical protein F443_12618 [Phytophthora parasitica P1569]) HSP 1 Score: 131.3 bits (329), Expect = 2.100e-26 Identity = 63/142 (44.37%), Postives = 98/142 (69.01%), Query Frame = 0 Query: 663 LLVRCATAAHSHALLTLGFSSGCWAWEFQLAEDITNDESICLGAAVKPLTSSSYNSSPSLWMYRCYNGNLYRRGGQVSGVSKARIHPQDVVRIELDHEKRTLSYSINGDKDQGVCFSEVTG-EIFPAVAFYGANRAVRLLGM 804 ++VR ++ +A + G SSG +W+F+L D +DE C GAA+ P+T + Y+SSPSLWM R YNGNLY RG ++S + ++HP D+V++++D + TL+Y ING D GV F+++ G E+ PAV+FYG+ + + LLG+ Sbjct: 546 IVVRTRETSYQYAAVNCGISSGKASWKFRLDTDTQDDEMTCFGAAILPVTVNGYDSSPSLWMLRGYNGNLYARGHKLSR-TIGKVHPGDIVQVDVDMGEGTLAYKING-TDYGVVFTDLVGHEVHPAVSFYGSGKVITLLGV 685 The following BLAST results are available for this feature:
BLAST of NO18G02290 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO18G02290 ID=NO18G02290|Name=NO18G02290|organism=Nannochloropsis oceanica|type=gene|length=4972bpback to top protein sequence of NO18G02290.1 >NO18G02290.1-protein ID=NO18G02290.1-protein|Name=NO18G02290.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1305bpback to top Synonyms
Publications
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