NO18G02230, NO18G02230 (gene) Nannochloropsis oceanica
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Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO18G02230 vs. NCBI_GenBank
Match: ETI36379.1 (hypothetical protein F443_17490 [Phytophthora parasitica P1569] >ETO65081.1 hypothetical protein F444_17530 [Phytophthora parasitica P1976]) HSP 1 Score: 89.0 bits (219), Expect = 7.800e-14 Identity = 67/238 (28.15%), Postives = 92/238 (38.66%), Query Frame = 0
Query: 86 EEGRKGGKEGGEAEGLTVYGLSVDVLRDDVAALMVQEERHMIRWRGEEEDPIVIDRFDGRALLDDRNLFMKWKKRGRA--GGREREDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVPSFPVPPSLTCPRTWKQHRLIGMTARRARADPQLEILLKVRQGDNKLFKFLNFEHTLHGYYKWMKEE 322
EE GG+ L V G S + + A + +E H+I WRGE + + +DRFD R LL+DR+LF + KKR R GGR E P + VP L P+T K H +I TA + R PQLE++LKV+ GDNK F+FL+ H LH YY ++++E
Sbjct: 3 EEQVDDTSSGGDVLSLGVRGYSCQIFDEPETAWKLHQESHLIPWRGESDGDLRVDRFDARNLLEDRSLFRQLKKRKRVEPGGRMPE-----------------------LKVEGAGKGEEETEQQILHRLRFGDYAVEFPPSEETFATENKFPYQYAEDESDEESDGEAFDPLWEVPEQLVMPKTKKLHAIIEATANKVRGHPQLEVMLKVKLGDNKKFRFLDASHALHAYYCFLRDE 217
BLAST of NO18G02230 vs. NCBI_GenBank
Match: ETL83295.1 (hypothetical protein L917_16745, partial [Phytophthora parasitica]) HSP 1 Score: 89.0 bits (219), Expect = 7.800e-14 Identity = 67/238 (28.15%), Postives = 92/238 (38.66%), Query Frame = 0
Query: 86 EEGRKGGKEGGEAEGLTVYGLSVDVLRDDVAALMVQEERHMIRWRGEEEDPIVIDRFDGRALLDDRNLFMKWKKRGRA--GGREREDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVPSFPVPPSLTCPRTWKQHRLIGMTARRARADPQLEILLKVRQGDNKLFKFLNFEHTLHGYYKWMKEE 322
EE GG+ L V G S + + A + +E H+I WRGE + + +DRFD R LL+DR+LF + KKR R GGR E P + VP L P+T K H +I TA + R PQLE++LKV+ GDNK F+FL+ H LH YY ++++E
Sbjct: 3 EEQVDDTSSGGDVLSLGVRGYSCQIFDEPETAWKLHQESHLIPWRGESDGDLRVDRFDARNLLEDRSLFRQLKKRKRVEPGGRMPE------------------------------------------LNVEGAGEVEFPPSEETFATENKFPYQYAEDESDEESDGEAFDPLWEVPEQLVMPKTKKLHAIIEATANKVRGHPQLEVMLKVKLGDNKKFRFLDASHALHAYYCFLRDE 198
BLAST of NO18G02230 vs. NCBI_GenBank
Match: XP_008895960.1 (hypothetical protein PPTG_03925 [Phytophthora parasitica INRA-310] >ETN18265.1 hypothetical protein PPTG_03925 [Phytophthora parasitica INRA-310] >ETP34320.1 hypothetical protein F442_17340 [Phytophthora parasitica P10297]) HSP 1 Score: 89.0 bits (219), Expect = 7.800e-14 Identity = 67/238 (28.15%), Postives = 92/238 (38.66%), Query Frame = 0
Query: 86 EEGRKGGKEGGEAEGLTVYGLSVDVLRDDVAALMVQEERHMIRWRGEEEDPIVIDRFDGRALLDDRNLFMKWKKRGRA--GGREREDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVPSFPVPPSLTCPRTWKQHRLIGMTARRARADPQLEILLKVRQGDNKLFKFLNFEHTLHGYYKWMKEE 322
EE GG+ L V G S + + A + +E H+I WRGE + + +DRFD R LL+DR+LF + KKR R GGR E P + VP L P+T K H +I TA + R PQLE++LKV+ GDNK F+FL+ H LH YY ++++E
Sbjct: 3 EEQVDDTSSGGDVLSLGVRGYSCQIFDEPETAWKLHQESHLIPWRGESDGDLRVDRFDARNLLEDRSLFRQLKKRKRVEPGGRMPE-----------------------LKVEGAGEGEEETEQQILHRLRFGDYAVEFPPSEETFATENKFPYQYAEDESDEESDGEAFDPLWEVPEQLVMPKTKKLHAIIEATANKVRGHPQLEVMLKVKLGDNKKFRFLDASHALHAYYCFLRDE 217
BLAST of NO18G02230 vs. NCBI_GenBank
Match: ETP06207.1 (hypothetical protein F441_17358 [Phytophthora parasitica CJ01A1]) HSP 1 Score: 89.0 bits (219), Expect = 7.800e-14 Identity = 67/238 (28.15%), Postives = 92/238 (38.66%), Query Frame = 0
Query: 86 EEGRKGGKEGGEAEGLTVYGLSVDVLRDDVAALMVQEERHMIRWRGEEEDPIVIDRFDGRALLDDRNLFMKWKKRGRA--GGREREDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVPSFPVPPSLTCPRTWKQHRLIGMTARRARADPQLEILLKVRQGDNKLFKFLNFEHTLHGYYKWMKEE 322
EE GG+ L V G S + + A + +E H+I WRGE + + +DRFD R LL+DR+LF + KKR R GGR E P + VP L P+T K H +I TA + R PQLE++LKV+ GDNK F+FL+ H LH YY ++++E
Sbjct: 3 EEQVDDTSSGGDVLSLGVRGYSCQIFDEPETAWKLHQESHLIPWRGESDGDLRVDRFDARNLLEDRSLFRQLKKRKRVEPGGRMPE-----------------------LKVEGAGKGEEETEQQILHRLRFGDYAVEFPPSEETFATENKFPYQYAEDESGEESDGEAFDPLWEVPEQLVMPKTKKLHAIIEATANKVRGHPQLEVMLKVKLGDNKKFRFLDASHALHAYYCFLRDE 217
BLAST of NO18G02230 vs. NCBI_GenBank
Match: ETK76591.1 (hypothetical protein L915_17023 [Phytophthora parasitica]) HSP 1 Score: 71.2 bits (173), Expect = 1.700e-8 Identity = 32/67 (47.76%), Postives = 45/67 (67.16%), Query Frame = 0
Query: 255 PSFPVPPSLTCPRTWKQHRLIGMTARRARADPQLEILLKVRQGDNKLFKFLNFEHTLHGYYKWMKEE 322
P + VP L P+T K H +I TA + R PQLE++LKV+ GDNK F+FL+ H LH YY ++++E
Sbjct: 66 PLWEVPEQLVMPKTKKLHAIIEATANKVRGHPQLEVMLKVKLGDNKKFRFLDASHALHAYYCFLRDE 132
BLAST of NO18G02230 vs. NCBI_GenBank
Match: ETL30027.1 (hypothetical protein L916_16919, partial [Phytophthora parasitica]) HSP 1 Score: 71.2 bits (173), Expect = 1.700e-8 Identity = 32/67 (47.76%), Postives = 45/67 (67.16%), Query Frame = 0
Query: 255 PSFPVPPSLTCPRTWKQHRLIGMTARRARADPQLEILLKVRQGDNKLFKFLNFEHTLHGYYKWMKEE 322
P + VP L P+T K H +I TA + R PQLE++LKV+ GDNK F+FL+ H LH YY ++++E
Sbjct: 35 PLWEVPEQLVMPKTKKLHAIIEATANKVRGHPQLEVMLKVKLGDNKKFRFLDASHALHAYYCFLRDE 101
BLAST of NO18G02230 vs. NCBI_GenBank
Match: ETL83258.1 (hypothetical protein L917_16746 [Phytophthora parasitica]) HSP 1 Score: 71.2 bits (173), Expect = 1.700e-8 Identity = 32/67 (47.76%), Postives = 45/67 (67.16%), Query Frame = 0
Query: 255 PSFPVPPSLTCPRTWKQHRLIGMTARRARADPQLEILLKVRQGDNKLFKFLNFEHTLHGYYKWMKEE 322
P + VP L P+T K H +I TA + R PQLE++LKV+ GDNK F+FL+ H LH YY ++++E
Sbjct: 66 PLWEVPEQLVMPKTKKLHAIIEATANKVRGHPQLEVMLKVKLGDNKKFRFLDASHALHAYYCFLRDE 132
BLAST of NO18G02230 vs. NCBI_GenBank
Match: KUF83614.1 (Splicing factor [Phytophthora nicotianae]) HSP 1 Score: 71.2 bits (173), Expect = 1.700e-8 Identity = 32/67 (47.76%), Postives = 45/67 (67.16%), Query Frame = 0
Query: 255 PSFPVPPSLTCPRTWKQHRLIGMTARRARADPQLEILLKVRQGDNKLFKFLNFEHTLHGYYKWMKEE 322
P + VP L P+T K H +I TA + R PQLE++LKV+ GDNK F+FL+ H LH YY ++++E
Sbjct: 66 PLWEVPEQLVMPKTKKLHAIIEATANKVRGHPQLEVMLKVKLGDNKKFRFLDASHALHAYYCFLRDE 132
BLAST of NO18G02230 vs. NCBI_GenBank
Match: CBJ28972.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 65.9 bits (159), Expect = 7.100e-7 Identity = 111/247 (44.94%), Postives = 139/247 (56.28%), Query Frame = 0
Query: 254 VPSFPVPPSLTCPRTWKQHRLIGMTARRARADPQLEILLKVRQGDNKLFKFLNFEHTLHGYYKWMKEEEREEGEDYALDAQGRKERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAVRLLLGPVGE-----GRKEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXA---------------------PTKEMGAVMEKLVAFVLKNGEEFERKVREKEKDNGKFKFLNEEDVYYPYYQRLL 475
V F +P L P T++QH ++ TAR A PQLE+LL+++Q N+ F FL+ E +H YY ++K GE R++RXXXXXXXXXXXXXXXXXXXXXXXXXX L LG VG G EXXXXXXXXXXXXXXXXXXXXX A P +E V+EK+V +V KNG+ FE +VR++E N F FLN + ++ YY+R L
Sbjct: 237 VADFGIPEELVAPATFRQHMMMVGTARTAVRSPQLEVLLRLKQQANEAFSFLSDEDPVHPYYLFLK----SWGESALAAEYARQQRXXXXXXXXXXXXXXXXXXXXXXXXXXLKF------LAGLSLGAVGAPNLLGGAYEXXXXXXXXXXXXXXXXXXXXXPTGTTLPLAAGVSLGEAGGSVGEGVLLSPAVPGEEKRQVVEKMVGYVAKNGQAFEDRVRKREVSNPTFDFLNPANKFHAYYKRQL 473 The following BLAST results are available for this feature:
BLAST of NO18G02230 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 9
Relationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO18G02230 ID=NO18G02230|Name=NO18G02230|organism=Nannochloropsis oceanica|type=gene|length=2719bpback to top protein sequence of NO18G02230.1 >NO18G02230.1-protein ID=NO18G02230.1-protein|Name=NO18G02230.1|organism=Nannochloropsis oceanica|type=polypeptide|length=845bpback to top Synonyms
Publications
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