NO18G01600, NO18G01600 (gene) Nannochloropsis oceanica

Overview
NameNO18G01600
Unique NameNO18G01600
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1833
Alignment locationchr18:514981..516813 -

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Properties
Property NameValue
DescriptionDynamin-like protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr18genomechr18:514981..516813 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003924GTPase activity
GO:0005525GTP binding
GO:0016787hydrolase activity
GO:0000166nucleotide binding
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase
IPR000375Dynamin_central
IPR001401Dynamin_GTPase
IPR022812Dynamin_SF
Homology
BLAST of NO18G01600 vs. NCBI_GenBank
Match: EWM23366.1 (dynamin-like protein [Nannochloropsis gaditana])

HSP 1 Score: 736.9 bits (1901), Expect = 5.200e-209
Identity = 388/590 (65.76%), Postives = 465/590 (78.81%), Query Frame = 0
Query:    2 ASVLSAETKGAVSLRRLSWGSQSGKDAFDTSGRERKGSVDAAMGWELDVLEAPLQAKTDFIDDLSILWPLNKQVKAPGIIVMGAHGAGKSSILHALTGMPFPHSSASDSTRRPIKMQISSDPTTEATYALVSTVDPACSPDKTSTQRVSKLEDLSRVLAKLNGDTERRIGEEERGQAIYVKVVRPSGTAYTVVDLPGVDEKDPESVRVAEEFMRDEPNSLILVVLPLVDVFERAFPMALAKRVDPESRRTIGVVTKTDLVQKEMEAVEKLQMTSHTGVSLPLGYIAVRLANEKEKHKTRKQLLEKEHALFTTNPLLAGLRPERWGSVTLKKLIVDYQCNAIGHLVPDVCRRLHAELREL---EKXXXXXXXXEPEGKKGMGGKLLSDHQEFFRKLCTDANSLGFEIGELALSSDTRKDRQLNLGARLTGAIKKHEEEARRALPAAVAGKVGPWLNPSEGEVEG-TTTEPRVYVSRETMSHDLFRKSVREVCGPVLRAYATALLGEATLQLKEVTHVLVQEKFQEFPWLVESVKHEINLLLQKKKGEAERVLGRIVASEMNWCFLNEADLNAVEREVALNMAGKSGGGWGL 588
            A+  + E+K A  +RRLSW S          G + K SV++ + WELDVLEAPL+ KTD IDDLSILWPLN+Q+KAPGI+V+GA GAGKSS+L  LTGMPF + + SDST+RPIKM I++DPTT+ TY LVSTVDP CSP+  +T+ V KLE+LSR+LA LN + E     E R Q IYVKVVRPSG AY+V+DLPG++E+DPESVR  E+ +  +P+ +ILVVLPL D+F+RAFP+ALAKRVDPE RRTIGVVTKTDLVQK+M+AVEK+QMTS  GV+LPLGYIAVR A EKEK+++R+Q+L++E A FT+NPLLAGLRPERWGS TLK+L+VD Q NAIG  +P V R LH EL+EL   E+        +  G+     K LSDHQ+FF KLC DAN+LGFEIGELALSS TR++R LNLGARL  AI  HE EARRALPA+VA KVG WL     +VEG  ++EPR+YVSRETMSHD+FRKS+REVCGPVL  YATALL E   QL+EVTHVLVQEKF  FPWLV+S+KHE+NLLL KKK + E+VL RIV SEMNWCFL+EADLNAVEREVALNMAGKS GG G+
Sbjct:   50 AATGAGESKTAKLVRRLSWSSLK-------DGAKLKKSVESLVDWELDVLEAPLKVKTDLIDDLSILWPLNQQIKAPGIVVIGAQGAGKSSVLQLLTGMPFIYCTGSDSTKRPIKMNITTDPTTDETYTLVSTVDPECSPEDGNTKHVKKLEELSRLLAHLNENPEHS-EVEARKQPIYVKVVRPSGAAYSVMDLPGINEEDPESVRFTEDILHQDPSCVILVVLPLTDIFDRAFPVALAKRVDPEGRRTIGVVTKTDLVQKDMDAVEKVQMTSQPGVNLPLGYIAVRSAAEKEKNESRRQILQREQAFFTSNPLLAGLRPERWGSTTLKRLVVDCQSNAIGQSIPKVTRLLHKELQELDNEEEKAAEALGWKDRGQSQGRAKPLSDHQDFFTKLCLDANTLGFEIGELALSSSTRQERHLNLGARLAAAITFHENEARRALPASVAEKVGSWL-----DVEGFASSEPRIYVSRETMSHDVFRKSIREVCGPVLMHYATALLTETGQQLEEVTHVLVQEKFTGFPWLVQSLKHEVNLLLGKKKVDTEKVLQRIVTSEMNWCFLSEADLNAVEREVALNMAGKSSGGLGM 626          
BLAST of NO18G01600 vs. NCBI_GenBank
Match: XP_005853927.1 (dynamin-like protein, partial [Nannochloropsis gaditana CCMP526] >EKU22433.1 dynamin-like protein, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 694.5 bits (1791), Expect = 2.900e-196
Identity = 367/566 (64.84%), Postives = 441/566 (77.92%), Query Frame = 0
Query:    2 ASVLSAETKGAVSLRRLSWGSQSGKDAFDTSGRERKGSVDAAMGWELDVLEAPLQAKTDFIDDLSILWPLNKQVKAPGIIVMGAHGAGKSSILHALTGMPFPHSSASDSTRRPIKMQISSDPTTEATYALVSTVDPACSPDKTSTQRVSKLEDLSRVLAKLNGDTERRIGEEERGQAIYVKVVRPSGTAYTVVDLPGVDEKDPESVRVAEEFMRDEPNSLILVVLPLVDVFERAFPMALAKRVDPESRRTIGVVTKTDLVQKEMEAVEKLQMTSHTGVSLPLGYIAVRLANEKEKHKTRKQLLEKEHALFTTNPLLAGLRPERWGSVTLKKLIVDYQCNAIGHLVPDVCRRLHAELRELEK---XXXXXXXXEPEGKKGMGGKLLSDHQEFFRKLCTDANSLGFEIGELALSSDTRKDRQLNLGARLTGAIKKHEEEARRALPAAVAGKVGPWLNPSEGEVEG-TTTEPRVYVSRETMSHDLFRKSVREVCGPVLRAYATALLGEATLQLKEVTHVLVQEKFQEFPWLVESVKHEINLLLQKKKGEAERVLGRIVASEMNWCFLNE 564
            A+  + E+K A  +RRLSW S          G + K SV++ + WELDVLEAPL+ KTD IDDLSILWPLN+Q+KAPGI+V+GA GAGKSS+L  LTGMPF + + SDST+RPIKM I++DPTT+ TY LVSTVDP CSP+  +T+ V KLE+LSR+LA LN + E     E R Q IYVKVVRPSG AY+V+DLPG++E+DPESVR  E+ +  +P+ +ILVVLPL D+F+RAFP+ALAKRVDPE RRTIGVVTKTDLVQK+M+AVEK+QMTS  GV+LPLGYIAVR A EKEK+++R+Q+L++E A FT+NPLLAGLRPERWGS TLK+L+VD Q NAIG  +P V R LH EL+EL+K           +  G+     K LSDHQ+FF KLC DAN+LGFEIGELALSS TR++R LNLGARL  AI  HE EARRALPA+VA KVG WL     EVE   ++EPR YVSRETMSHD+FRKS+REVCGPVL  YATALL E   QL+EVTHVLVQEKF  FPWLV+S+KHE+NLLL KKK + E+VL RIV SEMNWCFL+E
Sbjct:   16 AATGAGESKTAKLVRRLSWSSIK-------DGAKLKKSVESLVDWELDVLEAPLKVKTDLIDDLSILWPLNQQIKAPGIVVIGAQGAGKSSVLQLLTGMPFIYCTGSDSTKRPIKMNITTDPTTDETYTLVSTVDPECSPEDGNTKHVKKLEELSRLLAHLNENPEHS-EVEARKQPIYVKVVRPSGAAYSVMDLPGINEEDPESVRFTEDILHQDPSCVILVVLPLTDIFDRAFPVALAKRVDPEGRRTIGVVTKTDLVQKDMDAVEKVQMTSQPGVNLPLGYIAVRSAAEKEKNESRRQILQREQAFFTSNPLLAGLRPERWGSTTLKRLVVDCQSNAIGQSIPKVTRLLHKELQELDKEEEKAAEALGWKDRGQSQGRAKPLSDHQDFFTKLCLDANTLGFEIGELALSSSTRQERHLNLGARLAAAITFHENEARRALPASVAEKVGSWL-----EVEDFASSEPRTYVSRETMSHDVFRKSIREVCGPVLMHYATALLTETGQQLEEVTHVLVQEKFTGFPWLVQSLKHEVNLLLGKKKVDTEKVLQRIVTSEMNWCFLSE 568          
BLAST of NO18G01600 vs. NCBI_GenBank
Match: EWM23365.1 (dynamin-like protein [Nannochloropsis gaditana])

HSP 1 Score: 332.0 bits (850), Expect = 3.800e-87
Identity = 228/661 (34.49%), Postives = 343/661 (51.89%), Query Frame = 0
Query:   18 LSWGSQSG--KDAFDTSGRERKGSVDAAMGWELDVLEAPLQAKTDFIDDLSILWPLNKQVKAPGIIVMGAHGAGKSSILHALTGMPFPHSSASDSTRRPIKMQISSDPTTEATYALVSTVDPACSPDKTSTQRVSKLEDLSRVLAKLNGD-----------------------TERRIGEEERG------------------------------QAIYVKVVRPSGTAYTVVDLPGVDE--KDPESVRVAEEFMRD-EPNSLILVVLPLVDVFERAFPMALAKRVDPESRRTIGVVTKTDLVQKEMEAVEKLQMTSHTGVSLPLGYIAVRLANEKEKHKTRKQLLEKEHALFTTNPLLAGLRPERWGSVTLKKLIVDYQCNAIGHLVPDVCRRLHAELRELEK------XXXXXXXXEPEGKKGMGGKLLSDHQEFFRKLCTDANSLGFEIGELALSSDTRKDRQLNLGARLTGAIKKHEEEARRALPAAVAGKVGPWLNPSEGEVEGTTTEPRVYVSRETMSHDLFRKSVREVCGPVLRAYATALLGEATLQLKEVTHVLVQEKFQEFPWLVESVKHEINLLLQKKKGEAERVLGRIVASEMNWCFLNEADLNAVEREVALNMAGKSGGG--------WGLE--RWRRRESSQINSCTGR 605
            L  GS SG  + +   S   R  SVD      L  LEA L  KTD IDD+  + P+   V+APGI+ +G  G+GKS+IL AL+G+P  H+S     +RP++++I SDPT    Y LVS  DP     K +T+R+    DL   LA L+ D                       T   I +EE                                + IYV+VVRPSG  YT++D P      +  E   +     ++ +P SL+L V+P+ DVF+RA  + +AKR+DP S++TIGVVTK  LV K M  VEKLQM     V+LPLGY+AV  A+      T + +L+ E   FTTNPLL GL+PERWG  +LK L++  Q N+I   +P + + + +E+ +L +               P  KK +G  +  + ++ F KLC++   + F+I +LA  S TR+DR+LNLG R   A++  E EARRALP   + +V  WL     E  G  +      + +++ H +FRK+VRE+  PVLR YA +++ +    LK     +++E+F  +  LVES+  ++  + + KK EA+ ++ R++ +E+NW  ++  D+  +E+E A +M     G         WG+E     +RES    S +G+
Sbjct:    2 LRMGSFSGGRRSSRRKSASSRPNSVDWCA--PLASLEACLTEKTDLIDDMKKVLPIT--VQAPGIVAIGMRGSGKSTILEALSGVPLSHAS---GLQRPVRVKIVSDPTCTKEYVLVSGTDPLF---KQNTRRLEHARDLPACLAALDKDVRTDEVGRTQGMKAETNPVEDAGTPTSISQEEEEAENIREELSEQSSYFTGLGGVGSSGPAEDLRLIYVRVVRPSGPTYTIMDFPAFSSPPRAEEEACLNRVLAKERDPASLVLAVMPVKDVFDRAEVLQIAKRLDPGSKQTIGVVTKMHLVTKGMGIVEKLQMNGSKAVALPLGYVAVCAADPGNPAGTYQDVLDYEAKFFTTNPLLKGLKPERWGLTSLKSLVIHCQTNSITQRIPGLSQAIRSEIEDLSRTCVQNDERIEQKATTPRKKKSLG--VFENTKDVFSKLCSEMTLVMFDINDLANGSSTRQDRKLNLGPRFLIAVETREAEARRALPVCNSSEVADWLWGELQEFGGVAS------NSDSIMHPIFRKAVRELFFPVLRGYAKSIIDDLDEMLKYAAEKMLEERFGAYSRLVESLTRDVTQVQETKKREADALIARLLEAELNWVLVDAVDMAHIEKETAKDMENSKTGDRGERRSDMWGMEGVDEEQRESKLNKSKSGK 644          
BLAST of NO18G01600 vs. NCBI_GenBank
Match: CBJ32499.1 (DRP, dynamin-related protein [Ectocarpus siliculosus])

HSP 1 Score: 131.7 bits (330), Expect = 7.600e-27
Identity = 96/322 (29.81%), Postives = 151/322 (46.89%), Query Frame = 0
Query:   51 LEAPLQAKTDFIDDLSILWPLNKQVKAPGIIVMGAHGAGKSSILHALTGMPFPHSSASDSTRRPIKMQISSDPTTEATYALVSTVD----PACSPDKTSTQRVSKLEDLSRVLAKLNGDTERRIGEEERGQAIYVKVVRPSGTAYTVVDLPGVDEKDP--------ESVRVAEEFMRDEPNSLILVVLPLVDVFERAFPMALAKRVDPESRRTIGVVTKTDLVQKEMEAVEKLQMTSHTGVSLPLGYIAVRLANEKEKHKTRKQLLEKEHALFTTNPLLAGLRPERWGSVTLKKLIVDYQCNAIGHLVPDVCRRLHAELREL 361
            +E  L  +   ++ L  L   N++VK PG++V GA  AGKSS+L AL GM  P    + +TR P+ + + + P  E    +    D         D+ ST       D+ R+  +L GD     G     + IY+K++RPSG   T++DLP +    P        E+V + ++F+ ++ N +ILVV+P +D F  A  +ALAK+ DP+ RRT+GVVTKTD ++ E +                                  +++  +E   F TN  +AG+  E WG  TL   IV+ Q   +   +P    +     +EL
Sbjct:   11 IENRLSGELGALEQLRALLQNNEEVKIPGVVVAGAQSAGKSSVLEALGGMKLPRGQ-NITTRVPLVLSLVAVPGAEPHAVIGGQADLSKGKIIGIDEIST-------DIERLTNELAGD-----GTAVSAKPIYLKIIRPSGPTLTLIDLPDITHNSPDGTQDIHTETVNLVKKFIEND-NMVILVVIPAMDDFANAEAIALAKKYDPDGRRTLGVVTKTDNIKVEEDT-------------------------------PAEEVRARERQFFQTNSEMAGIEKEYWGFDTLVGRIVEIQAERVQQFIPKFLAQSKRRTKEL 287          
BLAST of NO18G01600 vs. NCBI_GenBank
Match: XP_005716602.1 (unnamed protein product [Chondrus crispus] >CDF36783.1 unnamed protein product [Chondrus crispus])

HSP 1 Score: 128.6 bits (322), Expect = 6.400e-26
Identity = 107/399 (26.82%), Postives = 181/399 (45.36%), Query Frame = 0
Query:   75 VKAPGIIVMGAHGAGKSSILHALTGMPFPHSSASDSTRRPIKMQISSDPTTEATYALVSTVDPACSPD--KTSTQRVSKLEDLSRVLAKLNGDTERRIGEEERGQAIYVKVVRPSGTAYTVVDLPGVDEKDPE-------SVRVAEEFMRDEPNSLILVVLPLVDVFERAFPMALAKRVDPESRRTIGVVTKTDLV-QKEMEAVEKLQMTSHTGVSLPLGYIAVRLANEKEKHKTRKQLLEKEHALFTTNPLLAGLRPERWGSVTLKKLIVDYQCNAIGHLVPDVCRRLHAELRELEKXXXXXXXXEPEGKKGMGGKLLS--DHQEFFRKLCTDANSLGFEIGELALSSDTRKDRQLNLGARLTGAIKKHEEEARRALPAAVAGKVGPWLNPSEGEVEG 462
            +  PGI+V+GA  +GKSS+L  LT + FP  + +  TR PI +Q+  D +     A +      C  +  +T     S  +D++  +  L              + I+++ VR  G   T++DLPG+   D E       +  + +++++ E N + LVV+P  D F  +  + +AK  D    RT+GV++K DLV ++  + VEK+QMT    + L LGYIA+R    K        +   E  LF T+PLL  L P   G   L++ I+  Q N+I H +P +   +  ++ +L                 MG  L S  D   F  K  ++ N    +  +  + ++ R +  +N+ +R     K +  + R   P  ++ + G  L     E  G
Sbjct:   20 IPCPGIVVVGAQSSGKSSVLERLTDIAFPRDT-NTCTRVPIIVQLQRDASVTLPTATI------CGDEHFETDVINCSTKQDITNAIHDLTEKALVSTRSRVVDKPIHIRYVRSKGPVMTLIDLPGITHDDGEGRDIHGITADIVKKYLKYE-NMIALVVIPANDDFGNSEALKIAKTFDTTGARTLGVISKCDLVPEQHSDIVEKIQMTPSNAIKLGLGYIAIR---NKGPGDDLANIDNIETELFKTHPLLKNLAPHERGCGALRRKIISLQENSIKHAIPRIQTDVRHKIEQLSGEI-----------SAMGTDLDSDMDRNAFVSKHLSEIN----QSLQKLIRAEVRGNPSINVASRSYELYKMYAADVRHYFPDCLSKEYGAELQQESREFMG 392          
BLAST of NO18G01600 vs. NCBI_GenBank
Match: KOO31231.1 (dynamin-like protein [Chrysochromulina sp. CCMP291])

HSP 1 Score: 123.6 bits (309), Expect = 2.100e-24
Identity = 71/195 (36.41%), Postives = 113/195 (57.95%), Query Frame = 0
Query:  177 QAIYVKVVRPSGTAYTVVDLPGVDEKDPE--------SVRVAEEFMRDEPNSLILVVLPLVDVFERAFPMALAKRVDPESRRTIGVVTKTDLVQKEMEAVEKLQMTSHTGVSLPLGYIAV--RLANEKEKHKTRKQLLEKEHALFTTNPLLAGLRPERWGSVTLKKLIVDYQCNAIGHLVPDVCRRLHAELRELE 362
            + IYV VVRPSG  +T++D+PG+     +        +  + E +++D PN +ILVV+P  D F  A  + LAK+ DP   RT+GVVTK+DL++ + + V++++M     + L LG+IA+  R   E ++  TR + +  EH LF  + LL+ L P +WG  TL + IV  Q N +   +P++ + L   L E E
Sbjct:   11 EPIYVTVVRPSGPTFTLIDIPGITHMTADGQADVHEITKGMVESYIKD-PNMVILVVIPATDDFGNAEALKLAKKYDPYGLRTLGVVTKSDLIKPDSDIVQRIKMEG-KNIQLELGFIALRCRTPGEVKEGITRAEAMASEHRLFEKDELLSQLAPAQWGLRTLVRQIVAVQANRVEAFIPEIKQLLSTRLMEAE 203          
BLAST of NO18G01600 vs. NCBI_GenBank
Match: CEM15039.1 (unnamed protein product [Vitrella brassicaformis CCMP3155])

HSP 1 Score: 111.3 bits (277), Expect = 1.100e-20
Identity = 128/514 (24.90%), Postives = 216/514 (42.02%), Query Frame = 0
Query:   55 LQAKTDFIDDLSILWPLNKQVKAPGIIVMGAHGAGKSSILHALTGMPFPHSSASDSTRRPIKMQISSDPTTEATYALVSTVDPACSPDKTSTQRVSKLEDLSRVLAKLNGDTERRIGEEERGQAIYVKVVRPSGTAYTVVDLPGV------DEK-DPESVRVAEEFMRDEPNSLILVVLPLVDVFERAFPMALAKRVDPESRRTIGVVTKTDLVQKEMEA---VEKLQMTSHTGVSLPLGYIAVRLANEKEKHKTRKQLLEKEH-ALFTTNPLLAGLRPERWGSVTLKKLIVDYQCNAIGHLVPDVCRRLHAELRELEKXXXXXXXXEPEGKKGMGGKLLSDHQEFFRKLCTDANSLGFEIGELALS-SDTRKDRQLNLGARLTGAIKKHEEEARRALPAAVAGKVGPWLNPSEG-EVEGTTTEPRVYVSRETMSHDLFRKSVREVCGPVLRAYATALLGEATLQLKEVTHVLVQEKFQEFPWLVESVKHEINLLLQKKKGEAERVLGRIVASE 556
            LQ + D I+++  +   ++ ++ PG++V G   AGKSS+L  + G+PFP +  +  T+ P  +   +D + +     VS  +     D T  + ++ ++D+   + +L  D  R+ G     + IYV++   +    TV DLPG+      DE    E V +  E++  E   ++ VV    D    +  + LAK VDPE  RTI VVTKTD ++   E    ++ ++          L  IA+R  N K          E+E  A F  +P L  L  E WG  TL K I D Q   +   + D+  +L     ++E          P          + D       +  + + L  + G + LS  D R   Q  L  RL    K+ +          +  +V   L    G +       P V+   + M  D F + ++      +  Y+  L   A   +K    +LV+     FP  V++++ +I  LL  KK E    +G ++ S+
Sbjct:   17 LQTRLDAIEEVRGVLE-SEGIEVPGVVVCGDQSAGKSSVLERIMGVPFPRAQGT-CTKTPTILMGETDASADGVSVWVSLKE-----DITDAEELNDIKDIGNKITELTDDLVRQEGSAIVNRPIYVRIRGKNVPTLTVTDLPGLLYNKKGDENIHAEVVAMVNEYIEKEKTVILCVVPAGGDFLSTSEAIKLAKDVDPERHRTIVVVTKTDKIEPGEEGRHFLKSIKQGQDEIGGKKLKCIALR--NRKPDEIVLDIDAEQEEAAFFERHPDLCKLLSEEWGITTLVKRITDIQVVYVDEFMKDIKGKL---TEKIESVTAKLATLRPPCVD------IKDKNRCMNDILIELDQLLKQRGSIRLSDGDDRDSIQYGLRERLEDYAKRMKNIDINFFTEDIYKQVLDRLERCCGFDAPPELPHPDVF---QEMYVDAFERKLQ------VEHYSRILAEHACGFIKSELDILVESVADAFPSFVDALQGKIASLLDSKKQEVLSAIGSLIRSQ 503          
BLAST of NO18G01600 vs. NCBI_GenBank
Match: OII74502.1 (dynactin 4 [Cryptosporidium ubiquitum])

HSP 1 Score: 105.5 bits (262), Expect = 5.800e-19
Identity = 119/513 (23.20%), Postives = 209/513 (40.74%), Query Frame = 0
Query:   71 LNKQVKAPGIIVMGAHGAGKSSILHALTGMPFPHSSASDSTRRPIKMQISSDPTTEATYALVSTVDPACSPDKTSTQRVSKLEDLSRVLAKLNGDTERRIGEEER--GQAIYVKVVRPSGTAYTVVDLPGVDE---KDPESVRVAEEFMRD-------EPNSLILVVLPLVDVFERAFPMALAKRVDPESRRTIGVVTKTDLVQKEMEAVEKLQMTSHTGVSLPLGYIAV--RLANEKEKHKTRKQLLEKEHALFTTNPLLAGLRPERWGSVTLKKLIVDYQCNAIGHLVPDVCRRLHAELRELEKXXXXXXXXEP---EGKKGMGGKLLSDHQEFFRKLCTDANSLGFEIGELALSSDTRKDRQLNLGARLTGAIKK--HEEEARRALPAAVAGKVGPWLNPSEGEVEGTTTEPRVYVSRETMSHDLFRKSVREVCGPVLRAYATALLGEATLQLKEVTHVLVQEKFQEFPWLVESVKHEINLLLQKKKGEAERVLGRIVASEMNWCFLNEA 565
            L + +  P I V+G   +GKSS+L ++ G  F        TRRP++M++   P+          VD A         R  K  D  +V  +++  T+   G+ +      I + +        T++DLPG+     K  +     E+  RD       +P ++IL V+P       +  + L++RVDP+  RTIGVVTK DL+ +  +A + L       V L LGY  V  R + + +  K+ K  LE E A F+++P+   L PE  G+  L   +       I   +PD+ R ++A +R L           P     +  +   +++D+ E  +         G     L    D   D  ++ GA++     +   E              +   +   EG+       P        M   L    +R++  PV+       L   T  L+ V+  +  + F  FP L + +      +L ++K   + +L ++V +E  + F N++
Sbjct:   20 LQQYINLPRICVVGTQSSGKSSVLESVVGFDFLPRGEGIVTRRPVEMRLVHIPSKNG-------VDEAYV--VFERDRNKKFTDFEKVREEIDRLTDEVAGKNKGIVDDPIILTIYGTQCPDLTLIDLPGITRVPLKGSDQCDNIEQLTRDMAIRYARDPRTIILAVIPANADMSTSDALQLSRRVDPKGLRTIGVVTKIDLMDRGTDASKMLHGDE---VPLRLGYTGVKNRSSADLKAGKSIKDALEDEAAFFSSHPVYRNLSPELVGTKNLVSKLTKVLFKHIRTFLPDIRREINARIRTLTSKLDEFGQSVPLESNDRTQLMWAMITDYCEMIKNTIR-----GKYDKRLQTYFDHGNDGGMSSGAQIRVIFNELLDEYTDNDVTSXXXXXDIDAAIRMHEGDSMPGFPSP-------DMFEYLILPHLRKIQAPVMEC-----LDRVTSALENVSQKVAHKVFSRFPKLSDQILDRSQEILLQEKENTKTILEQLVEAETGYLFTNDS 503          
BLAST of NO18G01600 vs. NCBI_GenBank
Match: OLP81297.1 (Dynamin-related protein 4C [Symbiodinium microadriaticum])

HSP 1 Score: 105.5 bits (262), Expect = 5.800e-19
Identity = 88/296 (29.73%), Postives = 150/296 (50.68%), Query Frame = 0
Query:   78 PGIIVMGAHGAGKSSILHALTGMPFPHSSASDSTRRPIKMQISSDPTTEATYALVSTVDPACSPDKTSTQRVSKLEDLSRVLAKLNGDTERRIGEEERGQAIYVKVVRPSGTAYTVVDLPGVDEKDPE-------SVRVAEEFMRDEPNSLILVVLPLVDVFERAFPMALAKRVDPESRRTIGVVTKTD--LVQKEMEAVEKLQMTSHTGVSLPLGYIAVRLANEK--EKHKTRKQLLEKEHALFTTNPLLAGLRPERWGSVTLKKLIVDYQCNAIGHLVPDV---CRRLHAELRE 360
            PG++V+G   AGKSS+L  ++G+ FP +  +  TR P  + + +DPT   ++ALVS +D + +  K     V+ +E   + L   +      I  E    A+Y++VVR  G   +++DLPGV     +       +V + +E++  E   +IL V+P +  F  A  + LA+  DPE  RT+GVVTK D     +  + VEK+ M+  + V L  G+  V   ++K  ++  +R+ L +KE   FT +     L    WG++ L + +   Q   +   +P +    R+   +LRE
Sbjct:   55 PGVVVVGEQSAGKSSLLENISGIQFPRAQ-NTCTRMPCVLTMLTDPTVNESFALVS-MDSSFTDAKRCA--VADVEGQIKELTDQHTTGAAFISTE----ALYIRVVRRDGLQLSLIDLPGVTHNAEKMSNIHEVTVSLVKEYIEPE-EMVILCVIPAMSDFGNAEVVKLAREYDPEGIRTLGVVTKCDDAANAEASDIVEKVTMSRDSDVRLAFGFHCVVNRSQKNIDEGMSREDLWQKEEKTFTASD--RKLPANNWGTLRLMEKVAKIQEARVDECLPKIKESVRQRTIQLRE 339          
BLAST of NO18G01600 vs. NCBI_GenBank
Match: CUV04000.1 (unnamed protein product [Cryptosporidium hominis])

HSP 1 Score: 105.1 bits (261), Expect = 7.600e-19
Identity = 117/513 (22.81%), Postives = 208/513 (40.55%), Query Frame = 0
Query:   71 LNKQVKAPGIIVMGAHGAGKSSILHALTGMPFPHSSASDSTRRPIKMQISSDPTTEATYALVSTVDPACSPDKTSTQRVSKLEDLSRVLAKLNGDTERRIGEEER--GQAIYVKVVRPSGTAYTVVDLPGVDE---KDPESVRVAEEFMRD-------EPNSLILVVLPLVDVFERAFPMALAKRVDPESRRTIGVVTKTDLVQKEMEAVEKLQMTSHTGVSLPLGYIAV--RLANEKEKHKTRKQLLEKEHALFTTNPLLAGLRPERWGSVTLKKLIVDYQCNAIGHLVPDVCRRLHAELRELEKXXXXXXXXEP---EGKKGMGGKLLSDHQEFFRKLCTDANSLGFEIGELALSSDTRKDRQLNLGARLTGAIKK--HEEEARRALPAAVAGKVGPWLNPSEGEVEGTTTEPRVYVSRETMSHDLFRKSVREVCGPVLRAYATALLGEATLQLKEVTHVLVQEKFQEFPWLVESVKHEINLLLQKKKGEAERVLGRIVASEMNWCFLNEA 565
            L + +  P I V+G   +GKSS+L ++ G  F        TRRP++M++   P+       +         DK       K  D  +V  +++  T+   G+ +      I + +        T++DLPG+     K  +     E+  RD       +P ++IL V+P       +  + L++RVDP+  RTIGVVTK DL+ +  +A + L       V L LGY  V  R + + +  K+ K  LE E   F+T+P+   L PE  G+  L   +       I   +PD+ R ++A +R L           P     +  +   +++D+ E  +         G     L    D   D  ++ GA++     +   E              +   +   EG+       P        M   L    +R++  PV+       L + T  L+ V+  +  + F  FP L + +      +L ++K   + +L ++V +E  + F N++
Sbjct:   20 LQQYINLPRICVVGTQSSGKSSVLESVVGFDFLPRGEGIVTRRPVEMRLVHIPSKNG----IDEAYVVFEKDKN-----KKFTDFEKVREEIDRLTDEVAGKNKGIVDDPIILTIYGTQCPDLTLIDLPGITRVPLKGSDQCDNIEQLTRDMAIRYARDPRTIILAVIPANADMSTSDALQLSRRVDPKGLRTIGVVTKIDLMDRGTDASKMLHGDE---VPLRLGYTGVKNRSSADLKAGKSIKDALEDEATFFSTHPVYRNLSPELVGTKNLVSKLTKVLFKHIRTFLPDIRREINARIRTLSSRLDEFGQSVPLESSDRTQLMWAMITDYCEMIKNTIR-----GKYDKRLQTYFDHGSDGGMSSGAQIRVIFNELLDEYTENDVTSELTDYDIDAAIRMHEGDSMPGFPSP-------DMFEYLILPHLRKIQAPVMEC-----LDKVTSALENVSQKVAHKVFSRFPKLSDQILDRSQEILLQEKENTKTILEQLVEAETGYLFTNDS 503          
The following BLAST results are available for this feature:
BLAST of NO18G01600 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM23366.15.200e-20965.76dynamin-like protein [Nannochloropsis gaditana][more]
XP_005853927.12.900e-19664.84dynamin-like protein, partial [Nannochloropsis gad... [more]
EWM23365.13.800e-8734.49dynamin-like protein [Nannochloropsis gaditana][more]
CBJ32499.17.600e-2729.81DRP, dynamin-related protein [Ectocarpus siliculos... [more]
XP_005716602.16.400e-2626.82unnamed protein product [Chondrus crispus] >CDF367... [more]
KOO31231.12.100e-2436.41dynamin-like protein [Chrysochromulina sp. CCMP291... [more]
CEM15039.11.100e-2024.90unnamed protein product [Vitrella brassicaformis C... [more]
OII74502.15.800e-1923.20dynactin 4 [Cryptosporidium ubiquitum][more]
OLP81297.15.800e-1929.73Dynamin-related protein 4C [Symbiodinium microadri... [more]
CUV04000.17.600e-1922.81unnamed protein product [Cryptosporidium hominis][more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL008nonsL008Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR046ncniR046Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR043ngnoR043Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO18G01600.1NO18G01600.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO18G01600.1NO18G01600.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO18G01600 ID=NO18G01600|Name=NO18G01600|organism=Nannochloropsis oceanica|type=gene|length=1833bp
ATGGCATCGGTACTGTCGGCAGAGACAAAGGGTGCCGTCTCTCTCCGGCG
GCTTTCCTGGGGCAGTCAATCGGGCAAAGATGCCTTCGATACTAGCGGGC
GCGAACGTAAGGGCTCCGTCGACGCGGCAATGGGATGGGAACTTGACGTA
CTCGAGGCCCCCCTCCAGGCCAAGACAGACTTCATCGACGACCTCTCCAT
CCTCTGGCCTCTTAACAAACAAGTCAAAGCCCCGGGAATCATCGTCATGG
GTGCCCACGGTGCCGGCAAATCTTCGATCCTGCATGCCTTGACAGGGATG
CCTTTCCCGCATTCCTCTGCCTCGGACAGCACTAGGCGCCCCATCAAGAT
GCAGATCTCCTCCGATCCCACCACCGAGGCAACCTACGCCCTGGTCAGCA
CCGTCGATCCTGCTTGCTCCCCGGACAAGACCAGCACCCAGCGTGTCTCT
AAGCTGGAGGACCTGTCCCGTGTGCTCGCCAAATTGAACGGAGACACAGA
GAGGCGGATTGGGGAAGAGGAGAGGGGACAGGCGATCTATGTCAAGGTGG
TACGGCCTTCGGGAACGGCGTATACGGTGGTGGATTTGCCGGGAGTGGAT
GAAAAAGATCCGGAATCCGTCCGTGTGGCGGAGGAGTTTATGCGTGATGA
ACCCAACAGCCTGATTTTGGTGGTACTGCCCTTGGTAGATGTGTTTGAGC
GGGCGTTTCCCATGGCGTTGGCCAAGAGGGTTGACCCGGAGAGTCGGCGA
ACCATCGGGGTGGTGACCAAGACAGACCTTGTTCAAAAAGAGATGGAGGC
AGTGGAGAAGCTTCAAATGACCAGCCATACAGGCGTAAGTCTTCCTTTAG
GGTATATTGCTGTGCGTTTGGCCAACGAGAAGGAGAAGCATAAGACTCGC
AAGCAATTATTGGAGAAGGAGCATGCCCTTTTCACGACCAACCCGTTGCT
GGCAGGCTTGAGGCCGGAAAGATGGGGCTCGGTGACATTGAAGAAATTAA
TTGTGGATTACCAGTGCAATGCCATCGGGCACCTTGTTCCGGATGTCTGT
CGTCGGCTGCATGCAGAGCTACGGGAGCTGGAGAAAGAGGAGGAGGAGGA
GGCTGCGGCAGAGCCGGAAGGGAAGAAGGGGATGGGAGGAAAGCTGCTGT
CCGACCATCAAGAATTCTTCAGGAAGCTTTGCACGGATGCGAATAGCCTG
GGTTTTGAAATTGGGGAGTTGGCTCTGAGCAGTGACACCCGGAAGGATCG
ACAGCTCAACTTAGGTGCCCGTCTGACAGGTGCGATCAAAAAGCATGAAG
AGGAGGCGCGGAGAGCCTTGCCGGCAGCTGTTGCAGGCAAGGTGGGCCCT
TGGTTGAACCCGTCAGAGGGGGAGGTAGAAGGGACGACTACTGAGCCGCG
GGTATATGTGAGCCGGGAGACGATGTCGCATGATTTGTTTCGGAAGTCGG
TGAGGGAGGTGTGCGGCCCTGTGCTGCGTGCGTATGCCACTGCCCTGCTT
GGAGAGGCGACCCTGCAGTTGAAGGAAGTGACGCATGTGCTGGTGCAGGA
GAAATTCCAGGAGTTCCCGTGGTTGGTCGAGAGTGTGAAGCATGAGATTA
ACTTGCTCTTGCAGAAGAAGAAAGGGGAAGCAGAGAGGGTGCTTGGTCGG
ATTGTGGCCTCCGAGATGAACTGGTGCTTCTTGAATGAGGCGGATCTGAA
TGCCGTCGAACGAGAAGTAGCTCTTAATATGGCGGGTAAGTCCGGGGGGG
GCTGGGGTTTGGAAAGGTGGCGCCGTCGGGAGAGCAGCCAAATCAACAGT
TGCACTGGTCGGCGGAGATGTCGGAGGTGCTGA
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protein sequence of NO18G01600.1

>NO18G01600.1-protein ID=NO18G01600.1-protein|Name=NO18G01600.1|organism=Nannochloropsis oceanica|type=polypeptide|length=611bp
MASVLSAETKGAVSLRRLSWGSQSGKDAFDTSGRERKGSVDAAMGWELDV
LEAPLQAKTDFIDDLSILWPLNKQVKAPGIIVMGAHGAGKSSILHALTGM
PFPHSSASDSTRRPIKMQISSDPTTEATYALVSTVDPACSPDKTSTQRVS
KLEDLSRVLAKLNGDTERRIGEEERGQAIYVKVVRPSGTAYTVVDLPGVD
EKDPESVRVAEEFMRDEPNSLILVVLPLVDVFERAFPMALAKRVDPESRR
TIGVVTKTDLVQKEMEAVEKLQMTSHTGVSLPLGYIAVRLANEKEKHKTR
KQLLEKEHALFTTNPLLAGLRPERWGSVTLKKLIVDYQCNAIGHLVPDVC
RRLHAELRELEKEEEEEAAAEPEGKKGMGGKLLSDHQEFFRKLCTDANSL
GFEIGELALSSDTRKDRQLNLGARLTGAIKKHEEEARRALPAAVAGKVGP
WLNPSEGEVEGTTTEPRVYVSRETMSHDLFRKSVREVCGPVLRAYATALL
GEATLQLKEVTHVLVQEKFQEFPWLVESVKHEINLLLQKKKGEAERVLGR
IVASEMNWCFLNEADLNAVEREVALNMAGKSGGGWGLERWRRRESSQINS
CTGRRRCRRC*
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Synonyms
Publications