NO18G01280, NO18G01280 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO18G01280 vs. NCBI_GenBank
Match: XP_010912721.1 (PREDICTED: 22.7 kDa class IV heat shock protein-like [Elaeis guineensis]) HSP 1 Score: 70.1 bits (170), Expect = 1.100e-8 Identity = 49/144 (34.03%), Postives = 64/144 (44.44%), Query Frame = 0 Query: 101 AIGIITTFCADAIETQNTYIISADLPGVKRDDIRIAFLQEGVLSITAERQSLYEVTSKATENGGAGDIGKARRSPGWTNQQQEIDVSKEAADAFPKFLMREVTYGKTTRSFKLPPDADIDSTTAGFENGVLIVTMKKREVPKEK 245 A+ + CAD ET ++IS D+PGVKR+DI+I VL IT ER+S EV + K+ E T GK R F+LP AD+DS A ENGVL VT+ K K++ Sbjct: 61 AVDALALACADWKETPQAHVISLDVPGVKREDIKIEVEDNRVLRITGERKSEEEVEGE-------------------------------------KWHRAERTAGKFWRQFRLPASADMDSIKAHLENGVLTVTVPKLAEEKKR 167
BLAST of NO18G01280 vs. NCBI_GenBank
Match: ORY46173.1 (HSP20-like chaperone [Neocallimastix californiae]) HSP 1 Score: 68.9 bits (167), Expect = 2.500e-8 Identity = 48/162 (29.63%), Postives = 79/162 (48.77%), Query Frame = 0 Query: 83 LWRKVIQHQTTDMTQQNPAIGIITTFCADAIETQNTYIISADLPGVKRDDIRIAFLQEGVLSITAERQSLYEVTSKATENGGAGDIGKARRSPGWTNQQQEIDVSKEAADAFPKFLMREVTYGKTTRSFKLPPDADIDSTTAGFENGVLIVTMKKREVPKEK 245 L R + ++ D+ + +P I I E + Y I ADLPG+ +D ++I E +L+I+ ER+S++ ++ N + + +S E + K+ + E YGK +RSF++P DADI++ A ENGVL V K E K + Sbjct: 62 LSRALRNNELFDIVKFSPKINI--------SEDEKNYYIHADLPGMTKDQVKIELNDEHILTISGERKSIF------------------KKKESNENIKSKETISLEENNKV-KYNIMESNYGKFSRSFRIPEDADIENIHAKMENGVLEVVFNKIEPQKHQ 196
BLAST of NO18G01280 vs. NCBI_GenBank
Match: ORY74014.1 (HSP20-like chaperone [Neocallimastix californiae]) HSP 1 Score: 68.6 bits (166), Expect = 3.200e-8 Identity = 42/132 (31.82%), Postives = 65/132 (49.24%), Query Frame = 0 Query: 114 ETQNTYIISADLPGVKRDDIRIAFLQEG-VLSITAERQSLYEVTSKATENGGAGDIGKARRSPGWTNQQQEIDVSKEAADAFPKFLMREVTYGKTTRSFKLPPDADIDSTTAGFENGVLIVTMKKREVPKEK 245 E +N Y I ADLPG+K+D +++ E VL+I+ ER+++ + + KA++ E +YGK +RSF +P +ADI++ A ENGVL VT+KK E K + Sbjct: 86 EDENNYYIHADLPGMKKDQVKMELSDEDRVLTISGERETIIDDSDKASKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRIECSYGKFSRSFSIPENADINNIQAKMENGVLEVTLKKMEPQKNE 217
BLAST of NO18G01280 vs. NCBI_GenBank
Match: BAS04462.1 (HSP20-like chaperones superfamily protein [Marchantia polymorpha] >OAE29559.1 hypothetical protein AXG93_702s1120 [Marchantia polymorpha subsp. ruderalis] >PTQ34757.1 hypothetical protein MARPO_0076s0004 [Marchantia polymorpha]) HSP 1 Score: 68.2 bits (165), Expect = 4.200e-8 Identity = 44/134 (32.84%), Postives = 60/134 (44.78%), Query Frame = 0 Query: 111 DAIETQNTYIISADLPGVKRDDIRIAFLQEGVLSITAERQSLYEVTSKATENGGAGDIGKARRSPGWTNQQQEIDVSKEAADAFPKFLMREVTYGKTTRSFKLPPDADIDSTTAGFENGVLIVTMKKREVPKEK 245 D +ET ++ ADLPG+K+D+I+I +GVLSI+ ER SKE D + E ++GK R FKLP +A +A ENGVL VT+ K E K+K Sbjct: 53 DWVETPEAHVFKADLPGMKKDEIKIQVADDGVLSISGER-------------------------------------SKEKVDEKDNYRRSERSFGKFFRQFKLPANAKAQEISAKVENGVLTVTVPKTEESKKK 149
BLAST of NO18G01280 vs. NCBI_GenBank
Match: BAS04463.1 (HSP20-like chaperones superfamily protein [Marchantia polymorpha] >OAE29560.1 hypothetical protein AXG93_702s1130 [Marchantia polymorpha subsp. ruderalis] >PTQ34758.1 hypothetical protein MARPO_0076s0005 [Marchantia polymorpha]) HSP 1 Score: 68.2 bits (165), Expect = 4.200e-8 Identity = 44/134 (32.84%), Postives = 60/134 (44.78%), Query Frame = 0 Query: 111 DAIETQNTYIISADLPGVKRDDIRIAFLQEGVLSITAERQSLYEVTSKATENGGAGDIGKARRSPGWTNQQQEIDVSKEAADAFPKFLMREVTYGKTTRSFKLPPDADIDSTTAGFENGVLIVTMKKREVPKEK 245 D +ET ++ ADLPG+K+D+I+I +GVLSI+ ER SKE D + E ++GK R FKLP +A +A ENGVL VT+ K E K+K Sbjct: 53 DWVETPEAHVFKADLPGMKKDEIKIQVADDGVLSISGER-------------------------------------SKEKVDEEDNYRRSERSFGKFFRQFKLPANAKAQEISAKVENGVLTVTVPKTEESKKK 149
BLAST of NO18G01280 vs. NCBI_GenBank
Match: BAS04464.1 (HSP20-like chaperones superfamily protein [Marchantia polymorpha] >PTQ34759.1 hypothetical protein MARPO_0076s0006 [Marchantia polymorpha]) HSP 1 Score: 68.2 bits (165), Expect = 4.200e-8 Identity = 44/134 (32.84%), Postives = 60/134 (44.78%), Query Frame = 0 Query: 111 DAIETQNTYIISADLPGVKRDDIRIAFLQEGVLSITAERQSLYEVTSKATENGGAGDIGKARRSPGWTNQQQEIDVSKEAADAFPKFLMREVTYGKTTRSFKLPPDADIDSTTAGFENGVLIVTMKKREVPKEK 245 D +ET ++ ADLPG+K+D+I+I +GVLSI+ ER SKE D + E ++GK R FKLP +A +A ENGVL VT+ K E K+K Sbjct: 53 DWVETPEAHVFKADLPGMKKDEIKIQVADDGVLSISGER-------------------------------------SKEKVDEKDNYRRSERSFGKFFRQFKLPANAKAQEISAKVENGVLTVTVPKTEESKKK 149
BLAST of NO18G01280 vs. NCBI_GenBank
Match: ORY75258.1 (HSP20-like chaperone, partial [Neocallimastix californiae]) HSP 1 Score: 67.8 bits (164), Expect = 5.500e-8 Identity = 41/142 (28.87%), Postives = 67/142 (47.18%), Query Frame = 0 Query: 114 ETQNTYIISADLPGVKRDDIRIAFLQEGVLSITAERQSLYEVTSKATEN-----------GGAGDIGKARRSPGWTNQQQEIDVSKEAADAFPKFLMREVTYGKTTRSFKLPPDADIDSTTAGFENGVLIVTMKKREVPKEK 245 E +N Y I ADLPG+K+D +++ ++ +L+I+ ER+S+Y+ +EN K+ + E +YGK +RSF +P DA++++ A ENGVL V + K E PK + Sbjct: 18 EDENNYYIHADLPGMKKDQVKMEINEDRILTISGERKSIYDNYQNKSENXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKYSIIESSYGKFSRSFNIPEDANLENIQAKMENGVLEVIINKIEPPKNQ 159
BLAST of NO18G01280 vs. NCBI_GenBank
Match: BAS04465.1 (HSP20-like chaperones superfamily protein [Marchantia polymorpha] >PTQ34760.1 hypothetical protein MARPO_0076s0007 [Marchantia polymorpha]) HSP 1 Score: 67.4 bits (163), Expect = 7.200e-8 Identity = 44/134 (32.84%), Postives = 60/134 (44.78%), Query Frame = 0 Query: 111 DAIETQNTYIISADLPGVKRDDIRIAFLQEGVLSITAERQSLYEVTSKATENGGAGDIGKARRSPGWTNQQQEIDVSKEAADAFPKFLMREVTYGKTTRSFKLPPDADIDSTTAGFENGVLIVTMKKREVPKEK 245 D +ET ++ ADLPG+K+++I+I +GVLSI+ ER SKE D + E ++GK R FKLP +A TA ENGVL VT+ K E K+K Sbjct: 53 DWVETPEAHVFKADLPGMKKEEIKIQVADDGVLSISGER-------------------------------------SKEKVDEKDNYRRSERSFGKFFRQFKLPANAKAREITAKVENGVLTVTVPKTEESKKK 149
BLAST of NO18G01280 vs. NCBI_GenBank
Match: ORY23505.1 (HSP20-like chaperone, partial [Neocallimastix californiae]) HSP 1 Score: 67.4 bits (163), Expect = 7.200e-8 Identity = 42/136 (30.88%), Postives = 63/136 (46.32%), Query Frame = 0 Query: 114 ETQNTYIISADLPGVKRDDIRIAFLQEGVLSITAERQSLYEVTSKATENGGAGDIGKARRSPGWTNQQQEIDVSKEAADAFPKFLMREVTYGKTTRSFKLPPDADIDSTTAGFENGVLIVTMKKREVPKEKLVMIK 250 E +N Y I ADLPG+K+D +++ + +I+ ER+S + + D F M E +YGK RSF +P DAD+++ A ENGVL V+ KK E PK + +I+ Sbjct: 40 EDENNYYIHADLPGMKKDQVKMEISDDRTFTISGERESFKD----------SDDKEXXXXXXXXXXXXXXXXXXXXXXXXXXXFHMMECSYGKFERSFSIPEDADLNNIQAKMENGVLEVSFKKMEPPKSQKRIIQ 165
BLAST of NO18G01280 vs. NCBI_GenBank
Match: XP_001749677.1 (hypothetical protein [Monosiga brevicollis MX1] >EDQ85486.1 predicted protein [Monosiga brevicollis MX1]) HSP 1 Score: 67.0 bits (162), Expect = 9.400e-8 Identity = 42/142 (29.58%), Postives = 66/142 (46.48%), Query Frame = 0 Query: 111 DAIETQNTYIISADLPGVKRDDIRIAFLQEGVLSITAERQSLYEVTSKATE--------NGGAGDIGKARRSPGWTNQQQEIDVSKEAADAFPKFLMREVTYGKTTRSFKLPPDADIDSTTAGFENGVLIVTMKKREVPKEK 245 D E + Y + D PG+ +DI I + L+++ +R E A GAGD+ P ++ D K+A A P++ E ++G R+F LP DA++D+ TA NG L+VT+ K P+ K Sbjct: 72 DVREEADHYSLHIDTPGMSEEDISIELTGDHALAVSGKRSRRVETKGPALPATTKTDAITDGAGDVMDTDAEP--VPRKPAADQQKDATVAAPRWHRVERSFGSFQRTFNLPEDANVDNITASMHNGELVVTVPKLPTPQPK 211 The following BLAST results are available for this feature:
BLAST of NO18G01280 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO18G01280 ID=NO18G01280|Name=NO18G01280|organism=Nannochloropsis oceanica|type=gene|length=1797bpback to top protein sequence of NO18G01280.1 >NO18G01280.1-protein ID=NO18G01280.1-protein|Name=NO18G01280.1|organism=Nannochloropsis oceanica|type=polypeptide|length=250bpback to top Synonyms
Publications
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