NO18G00580, NO18G00580 (gene) Nannochloropsis oceanica
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Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO18G00580 vs. NCBI_GenBank
Match: XP_008616227.1 (hypothetical protein SDRG_11951 [Saprolegnia diclina VS20] >EQC30374.1 hypothetical protein SDRG_11951 [Saprolegnia diclina VS20]) HSP 1 Score: 151.8 bits (382), Expect = 1.800e-32 Identity = 98/260 (37.69%), Postives = 148/260 (56.92%), Query Frame = 0
Query: 1204 LSREIDEMALGLRNVAAFRRARQLTTLHFLELAVTALWPQAQCEVYGSFTTGLSVPTSDVDVVISCLPW--QRVPSPLLLSSLNDHLAAQPWVASVHCVRHAAIPIIKLVAKDPCLTEGQQQGILNNAAVIKIDISLDVPPLDAHLAYQPGGVHYGLQSSLFVQHLCTLHPQFPPLVLLLKQVLLQRGLSDSYTGGLSSYALTLLVGAALQPFLCQSLHTPPSLGTLLLSFLQTYSTSNFDTSRLGVCLAAPPHGPLFEL 1462
L +I +M L+++ + RR Q+ + L+ V LWP A+ V+GSF TGLS P SDVD++I+ + +R S LL+SL H +PWV ++ + IP++K+ + G QG VI++DIS D P H G+++ ++VQ L ++ P+ PPL+L+LKQ+LL+ L+DSY+GGLSSYALTLL+ + L+P + P+LG LLL FLQ + +FD + V + GPL L
Sbjct: 479 LHDDILDMYAMLQDIVSRRRPWQICVVTHLKECVARLWPNAEVHVFGSFATGLSCPKSDVDLLITGAAYDRKRTSSVELLASLLRH---EPWVQAIQVIERTTIPLVKVTTAAVPSSFGDAQG------VIRLDISFDQPQ------------HRGIETCMYVQRLVSVLPELPPLMLVLKQLLLEHDLNDSYSGGLSSYALTLLLASVLRPLQLVAPAHRPNLGELLLHFLQLFG-RDFDPQQWFV--RSTHGGPLIPL 714
BLAST of NO18G00580 vs. NCBI_GenBank
Match: OQR92771.1 (PAP-associated domain-containing protein 5-like [Achlya hypogyna]) HSP 1 Score: 151.8 bits (382), Expect = 1.800e-32 Identity = 91/235 (38.72%), Postives = 135/235 (57.45%), Query Frame = 0
Query: 1204 LSREIDEMALGLRNVAAFRRARQLTTLHFLELAVTALWPQAQCEVYGSFTTGLSVPTSDVDVVISCLPWQ--RVPSPLLLSSLNDHLAAQPWVASVHCVRHAAIPIIKLVAKDPCLTEGQQQGILNNAAVIKIDISLDVPPLDAHLAYQPGGVHYGLQSSLFVQHLCTLHPQFPPLVLLLKQVLLQRGLSDSYTGGLSSYALTLLVGAALQPFLCQSLHTPPSLGTLLLSFLQTY 1437
L +I +M ++++ A RR Q+ + L+ VT LWP AQ V+GSF TGL P SDVD++I+ +P + RV LL+SL H +PWV ++ + IP++K+ + G QG VI++DIS D P H G+++ +FVQ L + P+ PPL+L+LKQ+LL+ GL+DSYTGGLSSY LT+++ + L P + P+LG L L FL +
Sbjct: 459 LHHDILDMYTHIQDIVARRRPWQICVVTHLKECVTRLWPDAQVNVFGSFATGLGCPKSDVDLLITDVPRERCRVSHVELLASLLRH---EPWVQAIQVIERTTIPLVKVTTAAVPTSCGGAQG------VIQLDISFDQPQ------------HRGVETCVFVQRLVAVLPELPPLMLVLKQLLLEHGLNDSYTGGLSSYGLTIMLASVLNPLQLVAPAHRPNLGELFLHFLHLF 672
BLAST of NO18G00580 vs. NCBI_GenBank
Match: XP_012198793.1 (hypothetical protein SPRG_04479 [Saprolegnia parasitica CBS 223.65] >KDO30578.1 hypothetical protein SPRG_04479 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 132.1 bits (331), Expect = 1.400e-26 Identity = 83/233 (35.62%), Postives = 128/233 (54.94%), Query Frame = 0
Query: 1204 LSREIDEMALGLRNVAAFRRARQLTTLHFLELAVTALWPQAQCEVYGSFTTGLSVPTSDVDVVISCLPWQRVPSPLLLSSLNDHLAAQPWVASVHCVRHAAIPIIKLVAKDPCLTEGQQQGILNNAAVIKIDISLDVPPLDAHLAYQPGGVHYGLQSSLFVQHLCTLHPQFPPLVLLLKQVLLQRGLSDSYTGGLSSYALTLLVGAALQPFLCQSLHTPPSLGTLLLSFLQTY 1437
L +I +M L+++ + RR Q+ + L+ V LWP A+ V+GSF TGLS P SDVD++I+ + + R + ++ + AIP++K+ + G QG VI++DIS D P H G+++ ++VQ L ++ P+ PPL+L+LKQ+LL+ L+DSY+GGLSSYALTLL+ + L P + P+LG LLL FLQ +
Sbjct: 460 LHDDILDMYAMLQDIVSRRRPWQICVVTHLKDCVARLWPDAEVHVFGSFATGLSCPKSDVDLLITGVAYDR----------------KRISNAIQVIERTAIPLVKVTTAAVPSSFGAAQG------VIRLDISFDQPQ------------HRGIETCMYVQRLVSVLPELPPLMLVLKQLLLEHDLNDSYSGGLSSYALTLLLASVLSPLQLIAPAHRPNLGELLLHFLQLF 658
BLAST of NO18G00580 vs. NCBI_GenBank
Match: GBG32713.1 (PolyA RNA polymerase cid14 [Aurantiochytrium sp. FCC1311]) HSP 1 Score: 125.9 bits (315), Expect = 1.000e-24 Identity = 78/227 (34.36%), Postives = 120/227 (52.86%), Query Frame = 0
Query: 1219 AAFRRARQLTTLHFLELAVTALWPQAQCEVYGSFTTGLSVPTSDVDVVISCLPWQRVPSPLLLSSLNDHLAAQPWVASVHCVRHAAIPIIKLVAKDPCLTEGQQQGILNNAAVIKIDISLDVPPLDAHLAYQPGGVHYGLQSSLFVQHLCTLHPQFPPLVLLLKQVLLQRGLSDSYTGGLSSYALTLLVGAALQPFLCQSLHTPPS----LGTLLLSFLQTYSTSNF 1442
A RR QL + AV +++P A ++GS TGL+ P SDVD+V+ VP+ + + +L DHL Q WV + V H ++P+IKL ++ G Q ++N +DI+ D +Y H GL++ V+ L +P PL L++KQ L+ +GL+D + GGLSSY L L+V A LQ + +H P LG +L++FL+ Y+ F
Sbjct: 674 ALTRRPWQLAVAERIRTAVQSIFPGATTRLFGSLETGLAAPCSDVDMVVQRF---GVPARVAMRTLADHLRGQSWVQMIQSVEHTSVPVIKLATAQIPISFGNQGSLIN------VDITFD--------SYS----HTGLRTCALVRRLMASYPPLKPLTLVIKQFLVVKGLNDPFVGGLSSYGLVLMVTAILQRWFPSGMHGLPCPSNLLGAVLMTFLREYANPAF 879
BLAST of NO18G00580 vs. NCBI_GenBank
Match: OQR88873.1 (hypothetical protein THRCLA_10051 [Thraustotheca clavata]) HSP 1 Score: 114.4 bits (285), Expect = 3.100e-21 Identity = 108/360 (30.00%), Postives = 146/360 (40.56%), Query Frame = 0
Query: 1203 RLSREIDEMALGLRNVAAFRRARQLTTLHFLELAVTALWPQAQCEVYGSFTTGLSVPTSDVDVVISCLPWQRVPSP-----------LLLSSLNDHLA----AQPWVA--SVHCVRHAAIPIIKLVAKDPCLTEGQQQGILNNAAVIKIDISLDVPPLDAHLAYQPGGVHYGLQSSLFVQHLCTLHPQFPPLVLLLKQVLLQRGLSDSYTGGLSSYALTLLVGAALQPF---------------LCQSLHTPPSLGTLLLSFLQTYSTSNFDTSRLGVCLAAP---PHGPLFELSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEYVP--------MEPLVIQDPLRPSNNVG 1520
+L +I E L+ R A F AV ALWP+AQ YGSF TGLS+P+SD+D+VI CLP R P + + HLA + WV SV + +A+IPII L+ P +++DIS + P H GL ++ V L P PL+L+LK +++RGL +YTGGLSSYAL LLV LQ F S GT+LL F+ Y T FD + G+ +A L S ++P +P+ I+DPLRP+NNVG
Sbjct: 700 KLHWDICEFVSQLQAETQHRLAAHTAVSRFCVSAVQALWPRAQVRPYGSFVTGLSLPSSDLDLVI-CLPKVRRDEPAEAPGVLEGRNAIKETWQQHLARRLRTESWVVPESVKTIPNASIPIITLLTTSP--------------YNVRLDISFEGPG------------HNGLATNDLVHSLVHELPALTPLMLVLKTFIIERGLGVAYTGGLSSYALLLLVTRFLQEFHPPGGYDATVATQCNASVSSQCRSDFGTMLLGFMDFYGT-KFDPRQTGISVATRSFLDREHLHNASMSATGWHNVQMEHVQFENMNLSSPGSRRQHLHRDNWSHLPPYDYDPHKFDPVYIEDPLRPANNVG 1031
BLAST of NO18G00580 vs. NCBI_GenBank
Match: XP_015903837.2 (non-canonical poly(A) RNA polymerase PAPD5-like [Parasteatoda tepidariorum]) HSP 1 Score: 114.0 bits (284), Expect = 4.100e-21 Identity = 70/227 (30.84%), Postives = 122/227 (53.74%), Query Frame = 0
Query: 1226 QLTTLHFLELAVTALWPQAQCEVYGSFTTGLSVPTSDVDVVIS----CLPWQRVPSPLLLSSLNDHLAAQPWVASVHCVRHAAIPIIKLVAKDPCLTEGQQQGILNNAAVIKIDISLDVPPLDAHLAYQPGGVHYGLQSSLFVQHLCTLHPQFPPLVLLLKQVLLQRGLSDSYTGGLSSYALTLLVGAALQPFLCQSLHTPPSLGTLLLSFLQTYSTSNFDTSRLGV 1449
+L + + V +LWPQA+ EV+GSF TGL +P+SD+D+V++ C+P + LL + + + + + HA++PI+K++ + ++ I++DIS + G +S+ F+++ +P P LVL+LKQ L+ RGL++ +TGG++SY LTLLV + LQ F + +LGT+L+ F + Y NF+ R+ +
Sbjct: 89 RLKVIEHITRIVHSLWPQAKVEVFGSFRTGLYLPSSDIDLVVTGEWKCVPLSTLSEALLRNGIEED--------DITIIPHASVPIVKMI---------------HTSSKIRVDISFN--------------ASNGGKSAKFIKNNIKEYPPLPKLVLVLKQFLIHRGLNEVFTGGMNSYCLTLLVISFLQGFYKPKCYPSTNLGTMLMEFFEHYGV-NFNYERVSI 277
BLAST of NO18G00580 vs. NCBI_GenBank
Match: XP_008609266.1 (hypothetical protein SDRG_05331 [Saprolegnia diclina VS20] >EQC37104.1 hypothetical protein SDRG_05331 [Saprolegnia diclina VS20]) HSP 1 Score: 113.2 bits (282), Expect = 7.000e-21 Identity = 107/359 (29.81%), Postives = 149/359 (41.50%), Query Frame = 0
Query: 1203 RLSREIDEMALGLRNVAAFRRARQLTTLHFLELAVTALWPQAQCEVYGSFTTGLSVPTSDVDVVISCLPWQRVPSP-----------LLLSSLNDHLA----AQPWVA--SVHCVRHAAIPIIKLVAKDPCLTEGQQQGILNNAAVIKIDISLDVPPLDAHLAYQPGGVHYGLQSSLFVQHLCTLHPQFPPLVLLLKQVLLQRGLSDSYTGGLSSYALTLLVGAALQPFL------------CQ---SLHTPPSLGTLLLSFLQTYSTSNFDTSRLGVCLAA--------PPHGPLFELSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEYVP--MEPLVIQDPLRPSNNVG 1520
+L +I E L+ R A F AV ALWP+AQ YGSF TGLS+P+SD+D+VI CLP R P + + HLA +PWV SV + +A+IPII L+ P +++DIS + P H GL ++ V P PL+++LK +++RGL +YTGGLSSYAL LLV LQ F C S + GT+LL F+ Y + D G+ +A +GP+ + +Y P +P+ I+DPLRP+NNVG
Sbjct: 686 KLHWDICEFVSQLQAETQHRLAAHTAVSRFCVSAVQALWPRAQVRPYGSFVTGLSLPSSDLDLVI-CLPKVRRDEPAEAPGVLEGRNAIKETWQQHLARKLRTEPWVVPESVKTIPNASIPIITLLTTSP--------------YNVRLDISFEGPG------------HNGLSTNDLVHSFVHELPALTPLMVVLKTFIIERGLGVAYTGGLSSYALLLLVTRFLQEFAGGNGFDATVATQCNQSVSSQSASDFGTMLLGFMDFYG-NKLDPRATGISVATRSFLSREHHQYGPV----AAGWHAVQMDQFENLNLSSPGSRRQHLHHRDNWATYDYDPHKFDPVYIEDPLRPANNVG 1012
BLAST of NO18G00580 vs. NCBI_GenBank
Match: OQR95991.1 (hypothetical protein ACHHYP_17382 [Achlya hypogyna]) HSP 1 Score: 113.2 bits (282), Expect = 7.000e-21 Identity = 109/359 (30.36%), Postives = 149/359 (41.50%), Query Frame = 0
Query: 1203 RLSREIDEMALGLRNVAAFRRARQLTTLHFLELAVTALWPQAQCEVYGSFTTGLSVPTSDVDVVISCLPWQRVPSP-----------LLLSSLNDHLA----AQPWV--ASVHCVRHAAIPIIKLVAKDPCLTEGQQQGILNNAAVIKIDISLDVPPLDAHLAYQPGGVHYGLQSSLFVQHLCTLHPQFPPLVLLLKQVLLQRGLSDSYTGGLSSYALTLLVGAALQPF--------------LCQSLHTPPSLGTLLLSFLQTYSTSNFDTSRLGVCLAA-------PPH--GPLFELSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEYVP--MEPLVIQDPLRPSNNVG 1520
+L +I E L+ R A F AV ALWP+AQ YGSF TGLS+P+SD+D+VI CLP R P + + HLA ++PWV SV + +A+IPII L+ P +++DIS + P H GL ++ V L P PL+L+LK +++RGL +YTGGLSSYAL LLV LQ F L + + G +LL F+ + T FD G+ +A PH P +Y P +P+ I+DPLRP+NNVG
Sbjct: 696 KLHWDICEFVSQLQAETQQRMAAHTAVSRFCVSAVQALWPRAQVRPYGSFVTGLSLPSSDLDLVI-CLPKVRRDEPAEAPGVLEGRNAIKETWQQHLARKLRSEPWVLPESVKTIPNASIPIITLLTTAP--------------YHVRLDISFEGPG------------HNGLATNDLVLSLVHELPALTPLMLVLKTFVIERGLGVAYTGGLSSYALLLLVTRFLQEFHGGGFDASVATQCNLAVAAQSRADFGAMLLGFMDFFGT-KFDPRATGISVATRSFLSRDHPHCGPPSTSGWHPVQMEHVQFENMNLSSPGSRRQHLHRDSWSHLPPFDYDPHKFDPVYIEDPLRPANNVG 1026
BLAST of NO18G00580 vs. NCBI_GenBank
Match: XP_022799784.1 (non-canonical poly(A) RNA polymerase PAPD5-like [Stylophora pistillata] >PFX19810.1 Non-canonical poly(A) RNA polymerase PAPD5 [Stylophora pistillata]) HSP 1 Score: 112.8 bits (281), Expect = 9.100e-21 Identity = 76/213 (35.68%), Postives = 116/213 (54.46%), Query Frame = 0
Query: 1237 VTALWPQAQCEVYGSFTTGLSVPTSDVDVVISCLPWQRVPSPLLLSSLNDHLAAQPWVASVHCVRHAAIPIIKLVAKDPCLTEGQQQGILNNAAVIKIDISLDVPPLDAHLAYQPGGVHYGLQSSLFVQHLCTLHPQFPPLVLLLKQVLLQRGLSDSYTGGLSSYALTLLVGAALQPFLCQSLHTPPS-LGTLLLSFLQTYSTSNFDTSRLGV 1449
+ LWP A+ EVYGSF TGL +PTSD+D+V+ W+R+P L +L + A+ +S+ + A++PIIKL + +K+DIS +VP GL+++ FV+ + P PPLVL+LKQ LLQR L++ +TGG+SSY+L L+ + LQ + T S LG LL+ F + Y N + + +G+
Sbjct: 134 IRRLWPTAEVEVYGSFRTGLYLPTSDIDIVVFG-NWERLPLWTLEQALTANKIAE--ASSIKVLDKASVPIIKLT---------------DQKTNVKVDISFNVPA--------------GLKAAEFVKDQIEIFPCLPPLVLVLKQFLLQRELNEVFTGGMSSYSLILMAISFLQNHIRNDGRTQKSNLGVLLIEFFELYG-RNLNYTNVGI 313
BLAST of NO18G00580 vs. NCBI_GenBank
Match: XP_008875065.1 (hypothetical protein H310_10446 [Aphanomyces invadans] >ETV96273.1 hypothetical protein H310_10446 [Aphanomyces invadans]) HSP 1 Score: 112.1 bits (279), Expect = 1.500e-20 Identity = 111/366 (30.33%), Postives = 150/366 (40.98%), Query Frame = 0
Query: 1203 RLSREIDEMALGLRNVAAFRRARQLTTLHFLELAVTALWPQAQCEVYGSFTTGLSVPTSDVDVVISCLPWQRVPSP-----------LLLSSLNDHLA----AQPWVA--SVHCVRHAAIPIIKLVAKDPCLTEGQQQGILNNAAVIKIDISLDVPPLDAHLAYQPGGVHYGLQSSLFVQHLCTLHPQFPPLVLLLKQVLLQRGLSDSYTGGLSSYALTLLVGAALQPF-----------------LCQSLHTPPSLGTLLLSFLQTYSTSNFDTSRLGVCLAAPPHGPLFEL------SSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXG-------EYVP--MEPLVIQDPLRPSNNVG 1520
+L +I E L+ R A F AV ALWP+AQ YGSF TGLS+P+SD+D+VI CLP R P + + HLA ++ WV SV + +A+IPII L+ P +++DIS + P H GL ++ V P PL+L+LK ++ RGL +YTGGLSSYAL L+V LQ F L S + GT+LL FL Y S FD + G+ +A+ EL ++ G +Y P +P+ IQDPLRP NNVG
Sbjct: 742 KLHWDICEFVTHLQAETHSRLAAHTAVSRFCVSAVQALWPRAQVRPYGSFVTGLSLPSSDLDLVI-CLPKVRRDEPAEAPGVLEGRNAIKETWQQHLARKLRSESWVVPESVKTIPNASIPIITLLTTAP--------------YHVRLDISFEGPG------------HNGLATNDLVHSFLHELPALAPLMLVLKTFIIDRGLGVAYTGGLSSYALLLMVTRFLQEFEVGNRTCHPEAVSTQCNLIVSTQSRTDFGTMLLGFLNFYG-SKFDPRQTGISVASRCFLDRDELVQHSTAATTVWHNVPMEHVQFENLNLSSPGSKRQNLHRDHWTGPAPFKPCDYDPHKFDPIYIQDPLRPGNNVG 1079 The following BLAST results are available for this feature:
BLAST of NO18G00580 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO18G00580 ID=NO18G00580|Name=NO18G00580|organism=Nannochloropsis oceanica|type=gene|length=8575bpback to top protein sequence of NO18G00580.2 >NO18G00580.2-protein ID=NO18G00580.2-protein|Name=NO18G00580.2|organism=Nannochloropsis oceanica|type=polypeptide|length=1770bpback to top protein sequence of NO18G00580.1 >NO18G00580.1-protein ID=NO18G00580.1-protein|Name=NO18G00580.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1520bpback to top Synonyms
Publications
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