NO18G00460, NO18G00460 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO18G00460 vs. NCBI_GenBank
Match: EWM23267.1 (pre-mrna-splicing factor isy1 [Nannochloropsis gaditana]) HSP 1 Score: 363.6 bits (932), Expect = 5.400e-97 Identity = 244/276 (88.41%), Postives = 254/276 (92.03%), Query Frame = 0 Query: 1 MARNEEKAQAMLNKWLTMKKDLATGDKERRPFLSSDCHTLPEAERWRRQIIKEVSKKVTEIQNAGLGEHRLRDLNDQINKLLREKYHWQRRIKELGGPDYNRIEPRAFDADGRELPGGGGYKYFGAAKDLPGVKELFQKSAPKEMRRTRGDMYKGIDPDYYGYRDEDDGVLLKKEAEVEKIAVAAAVRAFKRPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKAHVPVPRQEDIQAALMEKKKRALMSKY 277 MARNEEKAQAMLNKWLTMKKDLATGDKERRPFLSSDCH L EAERWRRQIIKEV+KKV+E+QNAGLGEHRLRDLNDQINKLLREKYHWQ+RIKELGGPDYNRIEPRA+DADGRELPGGGGY+YFGAAKDLPGVKELFQKSAPKEMRRTRGDMYKGIDPDYYGYRDE+DG+LL+KE E XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKAHVPVP QEDI ALMEKKKRAL+SKY Sbjct: 1 MARNEEKAQAMLNKWLTMKKDLATGDKERRPFLSSDCHVLSEAERWRRQIIKEVTKKVSEVQNAGLGEHRLRDLNDQINKLLREKYHWQKRIKELGGPDYNRIEPRAYDADGRELPGGGGYRYFGAAKDLPGVKELFQKSAPKEMRRTRGDMYKGIDPDYYGYRDEEDGILLEKERE-----AXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKAHVPVPCQEDIMTALMEKKKRALLSKY 271
BLAST of NO18G00460 vs. NCBI_GenBank
Match: XP_009033703.1 (hypothetical protein AURANDRAFT_13578, partial [Aureococcus anophagefferens] >EGB11323.1 hypothetical protein AURANDRAFT_13578, partial [Aureococcus anophagefferens]) HSP 1 Score: 261.2 bits (666), Expect = 3.800e-66 Identity = 122/184 (66.30%), Postives = 152/184 (82.61%), Query Frame = 0 Query: 1 MARNEEKAQAMLNKWLTMKKDLATGD-KERRPFLSSDCHTLPEAERWRRQIIKEVSKKVTEIQNAGLGEHRLRDLNDQINKLLREKYHWQRRIKELGGPDYNRIEPRAFDADGRELPGGGGYKYFGAAKDLPGVKELFQKSAPKEMRRTRGDMYKGIDPDYYGYRDEDDGVLLKKEAEVEKIAV 184 MARNEEKAQ MLNKW+TMK++ G+ ERRPFL++DC +L + E+WR QI++E+++KV EIQN GLGEH++RDLND INKLLREK HWQ RI++LGGPDYN +EP+A DA+GR LPGGGGYKYFGAA+DLPGVKELF+ P + RRTRGDM+K + PDYYG+RD++D L KEA VE+ V Sbjct: 1 MARNEEKAQQMLNKWVTMKQEFNAGNIAERRPFLATDCKSLADCEKWRLQIMREITRKVAEIQNQGLGEHKIRDLNDTINKLLREKGHWQFRIRDLGGPDYNALEPKALDAEGRPLPGGGGYKYFGAARDLPGVKELFEAPPPVKKRRTRGDMFKHVTPDYYGFRDDNDPSLAAKEAVVEEATV 184
BLAST of NO18G00460 vs. NCBI_GenBank
Match: CBN77435.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 260.8 bits (665), Expect = 4.900e-66 Identity = 161/275 (58.55%), Postives = 194/275 (70.55%), Query Frame = 0 Query: 1 MARNEEKAQAMLNKWLTMKKDLATGDKERRPFLSSDCHTLPEAERWRRQIIKEVSKKVTEIQNAGLGEHRLRDLNDQINKLLREKYHWQRRIKELGGPDYNRIEPRAFDADGRELPGGGGYKYFGAAKDLPGVKELFQKSAPKEMRRTRGDMYKGIDPDYYGYRDEDDGVLLKKEAEVEKIAVAAAVRAFKRPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKAHVPVPRQEDIQAALMEKKKRALMSK 276 MARNEEKAQ M+NKW TMK+ +A ++ RRPFLSS+C L +AE WRR II+E SK V IQNAG GEH++RDLNDQINKLLRE+ HW +RI ELGGPDY P+++DADGRELPGGGGY YFGAAK LPGV+ELF KS + RRTR DMY+ I PDYYGYRDE+DGVL+ KEA +EK V +AV ++ XXXXXXXXXXXXXXXXXXXXXX +AHVPVP Q+ I+ A++++KK L+ + Sbjct: 1 MARNEEKAQMMMNKWTTMKEQMAKPERGRRPFLSSECDNLQDAELWRRDIIRETSKSVHLIQNAGAGEHKIRDLNDQINKLLRERTHWDKRILELGGPDYAANAPKSYDADGRELPGGGGYMYFGAAKGLPGVRELFHKSDVENPRRTRKDMYQFITPDYYGYRDEEDGVLVAKEAVMEKRKVQSAVSEWQ---------------AEKRRRLEDGEEEAGGDAXXXXXXXXXXXXXXXXXXXXXXEVRAHVPVPSQDAIKEAILKRKKLTLLKR 260
BLAST of NO18G00460 vs. NCBI_GenBank
Match: XP_022796527.1 (pre-mRNA-splicing factor ISY1 homolog [Stylophora pistillata]) HSP 1 Score: 259.6 bits (662), Expect = 1.100e-65 Identity = 157/277 (56.68%), Postives = 197/277 (71.12%), Query Frame = 0 Query: 1 MARNEEKAQAMLNKWLTM-KKDLATGDKERRPFLSSDCHTLPEAERWRRQIIKEVSKKVTEIQNAGLGEHRLRDLNDQINKLLREKYHWQRRIKELGGPDYNRIEPRAFDADGRELPGGGGYKYFGAAKDLPGVKELFQKSAPKEMRRTRGDMYKGIDPDYYGYRDEDDGVLLKKEAEVEKIAVAAAVRAFKRPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKAHVPVPRQEDIQAALMEKKKRALMSKY 277 MARN EKA ML +W + +K+ G KERRPFL+++C L EAE+WR+QII+EV+KKV +IQNAGLGE R+RDLND+INKLLREK HW+ RIKELGGPDY +I P+ D +G+E+PG GYKYFGAAKDLPGV+ELF++ P R+TRG++YK +D DYYGYRDEDDGVL+ E EVEK A+A A+ ++R XXXXXXXXXXXXXXXXXXXXXX AHVPVP Q++++ L+++KK L+ KY Sbjct: 1 MARNAEKAMTMLARWYDLQRKEAGKGIKERRPFLATECDNLQEAEKWRQQIIREVAKKVAQIQNAGLGEFRIRDLNDEINKLLREKRHWEDRIKELGGPDYAKIGPKMLDHEGKEVPGNRGYKYFGAAKDLPGVRELFEQEPPAPPRKTRGELYKDVDADYYGYRDEDDGVLVPLEQEVEKEAIARALDEWERKKEAGELVTEQDXXXXXXXXXXXXXXXXXXXXXXDQTEEGNQPFV------------AHVPVPSQKEVEEMLVQRKKMELLEKY 265
BLAST of NO18G00460 vs. NCBI_GenBank
Match: XP_001637461.1 (predicted protein [Nematostella vectensis] >EDO45398.1 predicted protein [Nematostella vectensis]) HSP 1 Score: 258.8 bits (660), Expect = 1.900e-65 Identity = 165/277 (59.57%), Postives = 205/277 (74.01%), Query Frame = 0 Query: 1 MARNEEKAQAMLNKWL-TMKKDLATGDKERRPFLSSDCHTLPEAERWRRQIIKEVSKKVTEIQNAGLGEHRLRDLNDQINKLLREKYHWQRRIKELGGPDYNRIEPRAFDADGRELPGGGGYKYFGAAKDLPGVKELFQKSAPKEMRRTRGDMYKGIDPDYYGYRDEDDGVLLKKEAEVEKIAVAAAVRAFKRPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKAHVPVPRQEDIQAALMEKKKRALMSKY 277 MARN EKA ML++W +K+ G KERRPFL+++C L EAE+WR QII+EV+KKV +IQNAGLGE R+RDLND+INKLLREK HW+ RIKELGGPDY +I P+ D +G+E+PG GYKYFGAAK+LPGV+ELF++ P R+TRG++YK ID DYYGYRDEDDGVL+ E E E+ A++ A+ +KR XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX AHVPVP Q++++ L+++KKR L+ KY Sbjct: 1 MARNAEKAMTMLSRWYDVQRKEAGKGIKERRPFLATECDNLQEAEKWRHQIIREVAKKVAQIQNAGLGEFRIRDLNDEINKLLREKRHWEDRIKELGGPDYGKIGPKMLDHEGKEVPGNRGYKYFGAAKELPGVRELFEQEPPAPPRKTRGELYKDIDADYYGYRDEDDGVLVPIEQEAEEEAISRAMDEWKRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTEEGAEKEQSFV-------------AHVPVPSQKEVEELLVQRKKRELLDKY 264
BLAST of NO18G00460 vs. NCBI_GenBank
Match: XP_020894265.1 (pre-mRNA-splicing factor ISY1 homolog [Exaiptasia pallida]) HSP 1 Score: 253.8 bits (647), Expect = 6.000e-64 Identity = 149/277 (53.79%), Postives = 190/277 (68.59%), Query Frame = 0 Query: 1 MARNEEKAQAMLNKWLTMK-KDLATGDKERRPFLSSDCHTLPEAERWRRQIIKEVSKKVTEIQNAGLGEHRLRDLNDQINKLLREKYHWQRRIKELGGPDYNRIEPRAFDADGRELPGGGGYKYFGAAKDLPGVKELFQKSAPKEMRRTRGDMYKGIDPDYYGYRDEDDGVLLKKEAEVEKIAVAAAVRAFKRPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKAHVPVPRQEDIQAALMEKKKRALMSKY 277 MARN EKA ML++W +K K+ G ERRPFL+++C L EAE+WR QII+EV+KKV +IQNAGLGE R+RDLND+INKLLREK HW+ RI ELGGP+Y +I P+ D +G+E+PG GYKYFGAAK+LPGV+ELF++ PK R+TRG++YK +D DYYGYRDEDDGVL+ E EVEK A+A A+ ++ XXXXXXXXXXXXXXXXXX HVPVP Q++++ L+++KK L+ KY Sbjct: 1 MARNAEKAMTMLSRWYDVKRKEAGKGIPERRPFLATECDNLQEAEKWRHQIIREVAKKVAQIQNAGLGEFRIRDLNDEINKLLREKRHWEDRIVELGGPNYKKIGPKMLDHEGKEVPGNRGYKYFGAAKELPGVRELFEQEPPKAPRKTRGELYKDVDADYYGYRDEDDGVLVPIEQEVEKDAIARAIEEYQAXXXXXXXXXXXXXXXXXXXQPEQEGSDEEMATDEGGEGSQSFV--------------XHVPVPSQQEVEQMLVQRKKMELLDKY 263
BLAST of NO18G00460 vs. NCBI_GenBank
Match: XP_005846841.1 (hypothetical protein CHLNCDRAFT_31371 [Chlorella variabilis] >EFN54739.1 hypothetical protein CHLNCDRAFT_31371 [Chlorella variabilis]) HSP 1 Score: 251.5 bits (641), Expect = 3.000e-63 Identity = 113/183 (61.75%), Postives = 152/183 (83.06%), Query Frame = 0 Query: 1 MARNEEKAQAMLNKWLTMKKDLATGDKERRPFLSSDCHTLPEAERWRRQIIKEVSKKVTEIQNAGLGEHRLRDLNDQINKLLREKYHWQRRIKELGGPDYNRIEPRAFDADGREL----PGGGGYKYFGAAKDLPGVKELFQKSAPKEMRRTRGDMYKGIDPDYYGYRDEDDGVLLKKEAEVE 180 MARNEEKAQ+MLN+WL K+ GD+E+RP+L+S+CH L EA++WR+QI++E+ +KV +IQNAGLGEHR+RDLND+INKL+REK HW+RRI ELGGPDY+++ P+ D++GR L G GY+YFGAAK LPGV+ELF++ AP+++RRTR +M++ ID DYYG+RDE+DG+L K EAE E Sbjct: 1 MARNEEKAQSMLNRWLAGKQQEVKGDREKRPYLASECHDLNEADKWRQQILREIGRKVMDIQNAGLGEHRIRDLNDEINKLIREKGHWERRIVELGGPDYSKVGPKVTDSEGRSLVEAAGRGAGYRYFGAAKQLPGVRELFEREAPRQVRRTRAEMHRAIDADYYGFRDEEDGILEKVEAEAE 183
BLAST of NO18G00460 vs. NCBI_GenBank
Match: PFX21839.1 (Pre-mRNA-splicing factor ISY1-like [Stylophora pistillata]) HSP 1 Score: 250.0 bits (637), Expect = 8.700e-63 Identity = 118/181 (65.19%), Postives = 146/181 (80.66%), Query Frame = 0 Query: 1 MARNEEKAQAMLNKWLTM-KKDLATGDKERRPFLSSDCHTLPEAERWRRQIIKEVSKKVTEIQNAGLGEHRLRDLNDQINKLLREKYHWQRRIKELGGPDYNRIEPRAFDADGRELPGGGGYKYFGAAKDLPGVKELFQKSAPKEMRRTRGDMYKGIDPDYYGYRDEDDGVLLKKEAEVEK 181 MARN EKA ML +W + +K+ G KERRPFL+++C L EAE+WR+QII+EV+KKV +IQNAGLGE R+RDLND+INKLLREK HW+ RIKELGGPDY +I P+ D +G+E+PG GYKYFGAAKDLPGV+ELF++ P R+TRG++YK +D DYYGYRDEDDGVL+ E EVEK Sbjct: 1 MARNAEKAMTMLARWYDLQRKEAGKGIKERRPFLATECDNLQEAEKWRQQIIREVAKKVAQIQNAGLGEFRIRDLNDEINKLLREKRHWEDRIKELGGPDYAKIGPKMLDHEGKEVPGNRGYKYFGAAKDLPGVRELFEQEPPAPPRKTRGELYKDVDADYYGYRDEDDGVLVPLEQEVEK 181
BLAST of NO18G00460 vs. NCBI_GenBank
Match: PSC72254.1 (pre-mRNA-splicing factor ISY1-like protein [Micractinium conductrix]) HSP 1 Score: 250.0 bits (637), Expect = 8.700e-63 Identity = 153/281 (54.45%), Postives = 205/281 (72.95%), Query Frame = 0 Query: 1 MARNEEKAQAMLNKWLTMKKDLATGDKERRPFLSSDCHTLPEAERWRRQIIKEVSKKVTEIQNAGLGEHRLRDLNDQINKLLREKYHWQRRIKELGGPDYNRIEPRAFDADGRELPG----GGGYKYFGAAKDLPGVKELFQKSAPKEMRRTRGDMYKGIDPDYYGYRDEDDGVLLKKEAEVEKIAVAAAVRAFKRPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKAHVPVPRQEDIQAALMEKKKRALMSKYV 278 MARNEEKAQ+MLN+WL K++ A G+K RRP+L+S+CH L EA++WR+ I++++ +KV EIQNAGLGEH++RDLND+INKL+REK HW++RI ELGGPDY+++ P+ D++GR + G G GY+YFGAAK LPGVKELF+K AP+++RRTR +M++ ID DYYG+RDE+DGVL K E E AA+ ++ XXXXXXXXXXXXXXXXXXXXXXXXXX A+VP+P Q++I+A ++E KK AL+ +Y+ Sbjct: 1 MARNEEKAQSMLNRWLQGKQNEAKGEKARRPYLASECHDLNEADKWRQHILRDIGRKVMEIQNAGLGEHKIRDLNDEINKLIREKGHWEKRIVELGGPDYSKVGPKVTDSEGRAVEGASGRGPGYRYFGAAKQLPGVKELFEKEAPRQVRRTRAEMHRAIDADYYGFRDEEDGVLEKVETAAEGEMRRAAIEEWREKEAERQAAFXXXXXXXXXXXXXXXXXXXXXXXXXXAPQFV-----------------AYVPLPDQKEIEAKVLEGKKAALLRQYI 264
BLAST of NO18G00460 vs. NCBI_GenBank
Match: XP_019633873.1 (PREDICTED: pre-mRNA-splicing factor ISY1 homolog [Branchiostoma belcheri]) HSP 1 Score: 248.8 bits (634), Expect = 1.900e-62 Identity = 159/276 (57.61%), Postives = 195/276 (70.65%), Query Frame = 0 Query: 1 MARNEEKAQAMLNKWLTMKKDLATGDKERRPFLSSDCHTLPEAERWRRQIIKEVSKKVTEIQNAGLGEHRLRDLNDQINKLLREKYHWQRRIKELGGPDYNRIEPRAFDADGRELPGGGGYKYFGAAKDLPGVKELFQKSAPKEMRRTRGDMYKGIDPDYYGYRDEDDGVLLKKEAEVEKIAVAAAVRAFKRPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKAHVPVPRQEDIQAALMEKKKRALMSKY 277 MARN EKA L +W M+ D KERRPFL+S+ + L +AE+WR QII+EV+KKV++IQNAGLGE R+RDLND+INKLLREK HW+ RIKELGGPDY R+ P+ D +G+E+PG GYKYFGAAKDLPGV+ELF++ P RRTR ++YK +D DYYGYRDEDDGVL+ E ++EK VA AV +K XXXXXXXXXXXXXXXXXXXXXXXXXX AHVPVP Q++++ AL+ +KK L+ KY Sbjct: 1 MARNAEKAMTTLARWRNMQMDQGK-VKERRPFLASEENDLGKAEKWRHQIIREVAKKVSQIQNAGLGEFRIRDLNDEINKLLREKKHWEERIKELGGPDYERVGPKMLDQEGKEVPGNRGYKYFGAAKDLPGVRELFEQEPPAPPRRTRAELYKEVDADYYGYRDEDDGVLVPLEQDLEKEVVAEAVAEWKSQKEAGLLKDVEEXXXXXXXXXXXXXXXXXXXXXXXXXXQQQFI--------------AHVPVPSQKEVEEALLRRKKMELLQKY 261 The following BLAST results are available for this feature:
BLAST of NO18G00460 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO18G00460 ID=NO18G00460|Name=NO18G00460|organism=Nannochloropsis oceanica|type=gene|length=1960bpback to top protein sequence of NO18G00460.1 >NO18G00460.1-protein ID=NO18G00460.1-protein|Name=NO18G00460.1|organism=Nannochloropsis oceanica|type=polypeptide|length=278bpback to top Synonyms
Publications
|