NO17G02970, NO17G02970 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO17G02970 vs. NCBI_GenBank
Match: XP_005853965.1 (hypothetical protein NGA_0462100 [Nannochloropsis gaditana CCMP526] >EKU22399.1 hypothetical protein NGA_0462100 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 272.7 bits (696), Expect = 2.400e-69 Identity = 147/272 (54.04%), Postives = 162/272 (59.56%), Query Frame = 0 Query: 295 MGRRKTIEKRAWRALRRFYPEGKAFKVATTSECPQCSRKDR-----------------KRAP------GRGAKGPRRGAGGLPL---THHAFCAKDRLSPFLLXXXXXXXXXXXXXXXXXXXXXXXXXXXXAFLPPLDPGLYHLLPRCWLTTWRNYIRDPKAPRPRAPDLSLLLCEAHGFPLIPPHISSFLDGEKKGVLSSLNGRSGVVCEILSVEEWEELMKIFPTDYCLKFSVDPEDLSIAWSTPPCERCEPGVDDLSVTYRNRQRKWSF 541 MG+RK IEKRAW+ALRR+Y EGKAFKV+ T EC QCS+++ +P R G RG L H F A P FLPPLDPGLYHLLPRCWLT WRNY+RDP+APRPR PDLSLLLCEAHG PL+PPHISSFLDGEKKGVLSSLNGRSGVVCEI+SVEEW+ELMK +PTDYCL CEPGVDD+SVTYRNRQRKWSF Sbjct: 1 MGKRKIIEKRAWKALRRYYTEGKAFKVSATEECLQCSQREXXXXXXXXXXXXXRDLELSASPALTALYARRTGGQARGRRERKLDREDRHIFSALPHPRP------------PSGCPPSSFSLPPSSSSSALFLPPLDPGLYHLLPRCWLTVWRNYLRDPRAPRPRPPDLSLLLCEAHGLPLVPPHISSFLDGEKKGVLSSLNGRSGVVCEIVSVEEWDELMKHYPTDYCL-------------------NCEPGVDDMSVTYRNRQRKWSF 241
BLAST of NO17G02970 vs. NCBI_GenBank
Match: EWM24106.1 (hypothetical protein Naga_100286g2 [Nannochloropsis gaditana]) HSP 1 Score: 224.2 bits (570), Expect = 1.000e-54 Identity = 173/302 (57.28%), Postives = 191/302 (63.25%), Query Frame = 0 Query: 55 PPSALPLLALPREVLRDACSYLRAWDLSALVQTCRALGDEAESRVVEEVALHSLDLLS----------------SSSTSPSLPAYSSXXXASPGKDGSGQGLGVLLERLRFQEIQHVHRLLSLPEPLAGGYYVSKAWLSNHRRFAEALS------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSEVSVPWSEVNADITCIHGSLMPLQRQPSSSPSXXXXXXXXXXXXXXXXXXXXXXXXXPLSLSGSGLLMGRRKTIEKRAWRALRRFYPEGKAFKVATTSECPQCSRKD 335 PPS+LPL+ALPREVLR ACSYLRAWDLSALVQTCR + E +VEE+ALHS+DLLS XXX LG LLE LRFQE+QH+HRLLSLPEP +GGYYVSKAWLSNHRRFAEALS XXXXXXXXXXXXXXXXXXXXXXX SEVSVPW EVNADITC HG LMP+QR SPS XXXXXXXX +MG+RK IEKRAW+ALRR+Y EGKAFKV+ T EC QCS+++ Sbjct: 123 PPSSLPLIALPREVLRLACSYLRAWDLSALVQTCRHF-YQREGGIVEEIALHSMDLLSVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLGSLLEALRFQEVQHLHRLLSLPEPFSGGYYVSKAWLSNHRRFAEALSARRKXXXXXXXXXXXXXXXXXXXXXXXXXERSSSGRRRNSRERRESEVSVPWGEVNADITCAHGGLMPVQRPSPGSPS----------------SXXXXXXXXXXXXXXXXXVMGKRKIIEKRAWKALRRYYTEGKAFKVSATEECLQCSQRE 407
BLAST of NO17G02970 vs. NCBI_GenBank
Match: CBJ30332.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 148.7 bits (374), Expect = 5.300e-32 Identity = 143/433 (33.03%), Postives = 188/433 (43.42%), Query Frame = 0 Query: 64 LPREVLRDACSYLRAWDLSALVQTCRALGDEAESRVVEEVALHSLDLLSSSSTSPSLPAYSSXXXASPGKDGSGQGLGVLLERLRFQEIQHVHRLLSLPEPLAGGYYVSKAWLSNHRRFAEALSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSEVSVPWSEVNADITCIHGSLMPLQRQPSSSPSXXXXXXXXXXXXXXXXXXXXXXXXXPLSLSGSGLLMGRRKTIEKRAWRALRRFYPEGKAFKVATTSECPQC-SRKDRKRAPGRGAKGPRRGAGGLPLTHHAFCAKDRLSPFLLXXXXXXXXXXXXXXXXXXXXXXXXXXXXAFLPPLDPGLYHLLPRCWLTTWRNYIRDPKAPRPRAPDLSLLLCEAHGFPLIPPHISSFLDGEKKGVLSSLN-GRSGVVCEILSVEEWEELMKIFP 495 LP VL+ +L + DLSAL + E+ V E + SL +P+L + LE LR E+ HV L+ P+ GYY+SK+W N RR+ EA + XXXXXXXXXXXXXXXXXXXXXX S + PW +VNADI C H L+ S G +R+ ++KR WR L F+P F+ A + EC +C +R K R LP+ + K + L PL PG+YHLLPR WL WR Y+RDP+AP PR D +LLLCE HG L PPH+ FL GE++ +L L+ RSG VCE+++ EEW+ L +P Sbjct: 73 LPAVVLQSLFGWLLSTDLSAL-RASSVAASSPETAAVLETTVASLVKHRYGRANPTLREEDTGWRRD-------------LETLRHAELSHVASLVRGPQRPGKGYYLSKSWAGNLRRYVEAQA--RRRRSPSFASNXXXXXXXXXXXXXXXXXXXXXXERAESNLMPPWQDVNADIMCQHRG---------------------------------------LARSSQG-NRAKRQVVDKRVWRELVLFFPAAVPFR-AESVECSECRGLCANERKAEEAVKRQREQEIALPVLRALYGRKTGVPSAALSTPRGTPGSSAGPPSAARPAC-----------PLLPGIYHLLPRYWLNAWRAYVRDPRAPSPRTLDTALLLCEGHGLLLAPPHVEEFLSGERRALLGGLDPDRSGCVCEVVTPEEWDALTLCWP 437
BLAST of NO17G02970 vs. NCBI_GenBank
Match: XP_005854134.1 (hypothetical protein NGA_0244200, partial [Nannochloropsis gaditana CCMP526] >EKU22227.1 hypothetical protein NGA_0244200, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 119.8 bits (299), Expect = 2.600e-23 Identity = 85/183 (46.45%), Postives = 92/183 (50.27%), Query Frame = 0 Query: 62 LALPREVLRDACSYLRAWDLSALVQTCRALGDEAESRVVEEV-----------------------------------------ALHSLDLLSSSSTSPSLPAYSSXXXASPGKDGSGQG----------------LGVLLERLRFQEIQHVHRLLSLPEPLAGGYYVSKAWLSNHRRFAEALS 188 +ALPREVLR ACSYLRAWDLSALVQTCR + E +VEEV ALHS+DLLS S XXX LG LLE LRFQE+QH+HRLLSLPEP +GGYYVSKAWLSNHRRFAEALS Sbjct: 176 IALPREVLRLACSYLRAWDLSALVQTCRHF-YQREGGIVEEVRPAFPTAFTPSLSYSRLCARLNPLIISGLRLSPLPLPSFQIALHSMDLLSVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLGSLLEALRFQEVQHLHRLLSLPEPFSGGYYVSKAWLSNHRRFAEALS 357
BLAST of NO17G02970 vs. NCBI_GenBank
Match: XP_002182788.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC45524.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 100.9 bits (250), Expect = 1.300e-17 Identity = 120/429 (27.97%), Postives = 179/429 (41.72%), Query Frame = 0 Query: 56 PSALPLLALPREVLRDACSYLRAWDLSALVQTCRALGDEAESRVVEEVALHSLDLL-------------SSSSTSPSLPAYSSXXXASPGKDGSGQGLG-VLLERLRFQEIQHVHRLLSLPEPLAGGYYVSKAWLSNHRRFAEALSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSEVSVPWSEVNADITCIHGSLMPLQRQPSSSPSXXXXXXXXXXXXXXXXXXXXXXXXXPLSLSGSGLLMGRRKTIEKRAWRALRRFYPEGKAFKVATTSECPQC-SRKDRKRAPGRGAKGPRRGAGGLPLTHHAFCAKDRLSPFLLXXXXXXXXXXXXXXXXXXXXXXXXXXXXAFLPPLDPGLYHLLPRCWLTTWRNYIRDPKAPRPRAPDLSLLLCEAHGFPLIPPHISSFLDGEKKGVLSS 470 P+ LL LP E+ +YLRA+DL+A+ Q CR + +V + H+ + + + S LPA A + + E LR E+ V R+L+ PEP + GY VSK+W + ++ EA XXXXXXXXXXXXXXXXXXXXX S++S PW VN+D+ C H L S+ RR+ + K+AW+ L++ YP+ + ATT EC QC + + + R + R+ PL++ + + A PL G Y +LPR W WR Y++ + APD + LLC+AH PL+PPH+ ++L+G+ + +S Sbjct: 3 PNGNGLLTLPLELQVRLLTYLRAYDLAAVQQVCRCF---RQPELVHGIVAHAAEHVYPPSLTRGFDQQPTQSDPYRPLPATKDPPVAKSNAETDQRNKPCYTFEHLRNMELLVVARVLNSPEP-STGYIVSKSWCKSALKWLEA---------------QXXXXXXXXXXXXXXXXXXXXXQRRLSDISPPWPNVNSDLLCEHSCLSRCSNGKSA--------------------------------------RARRRYVNKQAWKILKKLYPDSTSLD-ATTGECLQCFAESEMNKKNQRDEEECRKLERKRPLSNPSLRRLYTRRTGVPLHAIRRAEVTVFSSTDSAVATPCEKIALATPCPLRDGKYFVLPRAWCHQWRRYMKTGEGGPCPAPDAAGLLCDAHRLPLLPPHLEAYLEGQATELFAS 373
BLAST of NO17G02970 vs. NCBI_GenBank
Match: XP_005853614.1 (hypothetical protein NGA_0476500 [Nannochloropsis gaditana CCMP526] >EKU22746.1 hypothetical protein NGA_0476500 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 82.8 bits (203), Expect = 3.600e-12 Identity = 37/44 (84.09%), Postives = 40/44 (90.91%), Query Frame = 0 Query: 140 LGVLLERLRFQEIQHVHRLLSLPEPLAGGYYVSKAWLSNHRRFA 184 LG LLE LRFQE+QH+HRLLSLPEP +GGYYVSKAWLSNHRR A Sbjct: 49 LGSLLEALRFQEVQHLHRLLSLPEPFSGGYYVSKAWLSNHRRCA 92
BLAST of NO17G02970 vs. NCBI_GenBank
Match: CCA16531.1 (conserved hypothetical protein [Albugo laibachii Nc14]) HSP 1 Score: 73.2 bits (178), Expect = 2.800e-9 Identity = 38/119 (31.93%), Postives = 63/119 (52.94%), Query Frame = 0 Query: 410 YHLLPRCWLTTWRNYIRDPKAPRPRAPDLSLLLCEAHGFPLIPPHISSFLDG----EKKGVLSSLNGRSGVVCEILSVEEWEELMKIFPTDYCLKFSVDPEDLSIAWSTPPCERCEPGV 525 Y+L+PR WL WRNY+R + P + L+C AH + P +++ FL G E S++ R+ + EI++ EEW+ L ++ ++ + F+VD + S W P C C G+ Sbjct: 288 YYLVPRSWLLKWRNYVRANEDTVPGPILNAELICVAHKNLIPPTYLTLFLSGFTMDEAIRATQSVDLRASCMYEIVTDEEWKALCNLYTCEFAVSFAVD--NGSFHWMIPECHICRYGM 404
BLAST of NO17G02970 vs. NCBI_GenBank
Match: EJK69025.1 (hypothetical protein THAOC_09760 [Thalassiosira oceanica]) HSP 1 Score: 70.5 bits (171), Expect = 1.800e-8 Identity = 55/185 (29.73%), Postives = 73/185 (39.46%), Query Frame = 0 Query: 297 RRKTIEKRAWRALRRFYPEGKAFKVATTSECPQCSRKDR--KRA---PGRGAKGPRRGAGGLPLTHHAFCAKDRLSPFLLXXXXXXXXXXXXXXXXXXXXXXXXXXXXAFLP---------PLDPGLYHLLPRCWLTTWRNYIRDPKAPRPRAPDLSLLLCEAHGFPLIPPHISSFLDGEKKGVL 468 RR+ ++K+AW+ L+ FYP+ T C C +D K+A K R+ PL + R S F P PL PG+Y LPR W WR Y+++ P PD S LCEAH PL+PPH+ SFL GE +L Sbjct: 242 RRRVMDKQAWKILKSFYPDSHELSAEFTG-CLICRAEDETAKKAVIDRKEEEKANRKKPLSCPLVRGFY---TRASKGFPSHCLVPPKPLPLEMSEIGKVETSHDGFSMFSPIPLQYERTCPLKPGVYCALPRSWCYKWRKYMKN-GGDCPPPPDASECLCEAHSLPLVPPHLESFLRGETTTLL 421
BLAST of NO17G02970 vs. NCBI_GenBank
Match: GAX92898.1 (Hypothetical protein PINS_000817 [Pythium insidiosum]) HSP 1 Score: 68.9 bits (167), Expect = 5.400e-8 Identity = 43/137 (31.39%), Postives = 65/137 (47.45%), Query Frame = 0 Query: 406 DPGLYHLLPRCWLTTWRNYIRDPKAPRPRAPDLSLLLCEAHGFPLIPPHISSFLDGEKKGV----LSSLNGRSGVVCEILSVEEWEELMKIFPTDYCLKFSVDPEDLSIAWSTPPCERCEPGVDDLSVTYRNRQRKW 539 D Y+L+P+ WL+ WR ++R P + L+C+AH ++P +I+ FL G V +L S EI++ EWE L + DY + F D S W TP C C G+ + S R R+R + Sbjct: 277 DHHTYYLVPKKWLSHWRQFVRSLSDDAPGPILNAELVCDAHQSTIVPAYITMFLSGFSLEVSLQATQALGTCSSQQYEIVTSGEWEALADRYCPDYAVGF--DVLSGSYHWRTPECNVCHFGMQE-SGQRRPRRRNY 410
BLAST of NO17G02970 vs. NCBI_GenBank
Match: OEU16900.1 (hypothetical protein FRACYDRAFT_269139 [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 68.6 bits (166), Expect = 7.000e-8 Identity = 27/67 (40.30%), Postives = 40/67 (59.70%), Query Frame = 0 Query: 404 PLDPGLYHLLPRCWLTTWRNYIRDPKAPRPRAPDLSLLLCEAHGFPLIPPHISSFLDGEKKGVLSSL 471 PL G Y +LPR W WR Y++ +P PD S LLC+ H ++PPH+ +FL+GE + +S+ Sbjct: 81 PLTSGTYVILPRSWCHQWRRYMKTGDGCKPLPPDSSFLLCDTHKLAVLPPHLEAFLNGETTQLFASV 147 The following BLAST results are available for this feature:
BLAST of NO17G02970 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 11
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO17G02970 ID=NO17G02970|Name=NO17G02970|organism=Nannochloropsis oceanica|type=gene|length=5593bpback to top protein sequence of NO17G02970.1 >NO17G02970.1-protein ID=NO17G02970.1-protein|Name=NO17G02970.1|organism=Nannochloropsis oceanica|type=polypeptide|length=541bpback to top Synonyms
Publications
|