NO17G02850, NO17G02850 (gene) Nannochloropsis oceanica

Overview
NameNO17G02850
Unique NameNO17G02850
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length894
Alignment locationchr17:833453..834346 -

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Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr17genomechr17:833453..834346 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
BLAST of NO17G02850 vs. NCBI_GenBank
Match: WP_096385932.1 (hypothetical protein [Stanieria sp. NIES-3757] >BAU66670.1 hypothetical protein STA3757_40750 [Stanieria sp. NIES-3757])

HSP 1 Score: 95.9 bits (237), Expect = 2.300e-16
Identity = 61/193 (31.61%), Postives = 92/193 (47.67%), Query Frame = 0
Query:   83 TLLLEALQACTFAAAFWECPPISYRLLTNTQIPFECMLLASPALERMAAQEDADDYPFREYFERQHRWREEKKKNGKGENGDSICVFDNLGRDATLVVPCYLGQGDKGSYSHFLSYLRAPSVPTSQKLALLQRVAQVTLDSCMHKKNADGEEVGVDNEELVWVSTSGMGVAWLHVRVEAQPKYYCWQEYVARG 276
            +  +  L +  F+A FWE PPI++  +      FE +L+ SP L ++  +  +    F+EYFE                  + +  F NL +DA LVVPC + +    +Y H  +++R    P SQ+ AL Q V  V   +               N+   WVSTSG+GV WLHVR+++ PKYY +  Y   G
Sbjct:   43 SFFISLLASAPFSAYFWETPPITHSTVNQ---EFEFVLVDSPQLTKVEPELSS----FKEYFE---------------STSEDVITFPNLNQDALLVVPCPIAK--SSAYPHLATFVR--EAPKSQQHALWQTVGSVLEQNL--------------NDRSTWVSTSGLGVYWLHVRLDSYPKYYSFNPYKIAG 195          
BLAST of NO17G02850 vs. NCBI_GenBank
Match: CBN75995.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 94.4 bits (233), Expect = 6.600e-16
Identity = 64/188 (34.04%), Postives = 91/188 (48.40%), Query Frame = 0
Query:   86 LEALQACTFAAAFWECPPISYRLLTNTQIPFECMLLASPALERMAAQEDADDYPFREYFERQHRWREEKKKNGKGENGDSICVFDNLGRDATLVVPCYLGQGDKGSYSHFLSYLRAPSVPTSQKLALLQRVAQVTLDSCMHKKNADGEEVGVDNEELVWVSTSGMGVAWLHVRVEAQPKYYCWQEYVA 274
            LE+++   F A FWE  P++    T T  P+E +L+ SP L    A   AD  PF E+   +           KG N   +  F NL RDA LVVPC  GQ    +Y+H  ++LR  + P  Q +     V +            + E     +E  VW+STSG+GV WLH R+++ PKYY +  + A
Sbjct:  128 LESMKEANFEAVFWESAPVT---RTTTDKPYEYVLVDSPRL----AAVTADGRPFAEHIASR-----------KGTN--DVVSFRNLRRDARLVVPCRGGQQPGANYAHLAAFLR--TAPRDQVVQFFGAVGE----------GLEDEIASRADETPVWLSTSGLGVYWLHARLDSVPKYYTYAPFKA 283          
BLAST of NO17G02850 vs. NCBI_GenBank
Match: WP_006274640.1 (hypothetical protein [Asticcacaulis biprosthecium] >EGF89445.1 hypothetical protein ABI_38590 [Asticcacaulis biprosthecum C19])

HSP 1 Score: 94.4 bits (233), Expect = 6.600e-16
Identity = 61/185 (32.97%), Postives = 91/185 (49.19%), Query Frame = 0
Query:   87 EALQACTFAAAFWECPPISYRLLTNTQIPFECMLLASPALERMAAQEDADDYPFREYFERQHRWREEKKKNGKGENGDSICVFDNLGRDATLVVPCYLGQGDKGSYSHFLSYLRAPSVPTSQKLALLQRVAQVTLDSCMHKKNADGEEVGVDNEELVWVSTSGMGVAWLHVRVEAQPKYYCWQEY 272
            EAL    F A FWE P  S + +     PFEC++  +PAL    A+  A+   F   F+                 G ++ VF++LGRDA LVVPC + +G    Y+H  S+LR  + P  Q  AL   + +               +  +  +   W+STSG+GV+WLHVR++ +PKYY ++ Y
Sbjct:   41 EALAGIPFDAFFWETPVWSAKTVGQ---PFECVVTPAPAL----AKRKANPQSFAAQFDAI-------------PPGTNVIVFESLGRDADLVVPCDIAEG--AMYTHLASFLR--TAPMGQATALWHHIGETV-------------QGWLQCDRHFWLSTSGLGVSWLHVRIDQRPKYYTYEPY 188          
BLAST of NO17G02850 vs. NCBI_GenBank
Match: WP_015133968.1 (hypothetical protein [Leptolyngbya sp. PCC 7376] >AFY38201.1 hypothetical protein Lepto7376_1881 [Leptolyngbya sp. PCC 7376])

HSP 1 Score: 94.0 bits (232), Expect = 8.600e-16
Identity = 67/189 (35.45%), Postives = 90/189 (47.62%), Query Frame = 0
Query:   84 LLLEALQACTFAAAFWECPPISYRLLTNT-QIPFECMLLASPALERMAAQEDADDYPFREYFERQHRWREEKKKNGKGENGDSICVFDNLGRDATLVVPCYLGQGDKGSYSHFLSYLRAPSVPTSQKLALLQRVAQVTLDSCMHKKNADGEEVGVDNEELVWVSTSGMGVAWLHVRVEAQPKYYCWQEY 272
            L +E L    F A  WE PP    L  NT   PFEC++  SP L R       D   FR + E                  D I  F NLG DA L+VPC +   D  SY H  S++R    PT+QK  LL+R+++   +                +E+ +W+ST+G GVAWLHVR+++ PKYY +  Y
Sbjct:   43 LFIETLIEVPFQAFRWETPP----LTKNTGDRPFECVVSDSPGLSRR-----PDQRTFRSHLE--------------PPPSDQIAEFTNLGGDAWLIVPCAVAPPD--SYVHLASFIR--QAPTTQKHTLLKRMSKAVQEHL--------------SEKPLWLSTAGGGVAWLHVRLDSFPKYYRYAPY 190          
BLAST of NO17G02850 vs. NCBI_GenBank
Match: WP_006099925.1 (hypothetical protein [Coleofasciculus chthonoplastes] >EDX76968.1 hypothetical protein MC7420_1971 [Coleofasciculus chthonoplastes PCC 7420])

HSP 1 Score: 94.0 bits (232), Expect = 8.600e-16
Identity = 66/186 (35.48%), Postives = 90/186 (48.39%), Query Frame = 0
Query:   86 LEALQACTFAAAFWECPPISYRLLTNTQIPFECMLLASPALERMAAQEDADDYPFREYFERQHRWREEKKKNGKGENGDSICVFDNLGRDATLVVPCYLGQGDKGSYSHFLSYLRAPSVPTSQKLALLQRVAQVTLDSCMHKKNADGEEVGVDNEELVWVSTSGMGVAWLHVRVEAQPKYYCWQEY 272
            +  L    F+A FWE PPI+   +      FE +L+ SP+L    A   AD   F  +F            +  GEN  SI  F NLG+DA LVVPC   Q     Y H  +++R    P  Q+ AL Q V      S + ++          N    WVSTSG+GV WLH+R++++PKYY +Q Y
Sbjct:   46 ISLLADAPFSAFFWETPPITDATVNQV---FEFVLVNSPSL----ANVQADPSDFARHF------------SAAGEN-KSIVTFPNLGKDALLVVPC--PQASMSPYCHLAAFMR--DAPEHQQHALWQNVG-----SALEQRL---------NPRPTWVSTSGLGVYWLHIRLDSRPKYYTYQPY 193          
BLAST of NO17G02850 vs. NCBI_GenBank
Match: WP_002653793.1 (hypothetical protein [Blastopirellula marina] >EAQ77266.1 hypothetical protein DSM3645_29311 [Blastopirellula marina DSM 3645])

HSP 1 Score: 94.0 bits (232), Expect = 8.600e-16
Identity = 66/187 (35.29%), Postives = 91/187 (48.66%), Query Frame = 0
Query:   85 LLEALQACTFAAAFWECPPISYRLLTNTQIPFECMLLASPALERMAAQEDADDYPFREYFERQHRWREEKKKNGKGENGDSICVFDNLGRDATLVVPCYLGQGDKGSYSHFLSYLRAPSVPTSQKLALLQRVAQVTLDSCMHKKNADGEEVGVDNEELVWVSTSGMGVAWLHVRVEAQPKYYCWQEY 272
            L + L    FAA  WE PPI +     T  P+E +LL SP L R      ++ + F E+FE+                 D I  F NLGR+A LV P    Q  + +Y H  +++R    P  Q+LAL Q V +      M ++  D           VW+ST+G GV+WLHVR++ QPKYY +Q Y
Sbjct:   46 LSDELAEAPFAAFRWETPPIDH---ATTDRPWEFVLLNSPNLAR-----PSEPHLFAEHFEKA---------------ADPITTFANLGRNALLVAP--TPQAHESAYGHLAAFVR--KAPQQQRLALWQEVGE-----AMTRRLGD---------RPVWLSTAGAGVSWLHVRLDDQPKYYGYQPY 191          
BLAST of NO17G02850 vs. NCBI_GenBank
Match: OQS53519.1 (hypothetical protein EHP00_2479 [Enterocytozoon hepatopenaei])

HSP 1 Score: 91.3 bits (225), Expect = 5.500e-15
Identity = 53/179 (29.61%), Postives = 93/179 (51.96%), Query Frame = 0
Query:   94 FAAAFWECPPISYRLLTNTQIPFECMLLASPALERMAAQEDADDYPFREYFERQHRWREEKKKNGKGENGDSICVFDNLGRDATLVVPCYLGQGDKGSYSHFLSYLR-APSVPTSQKLALLQRVAQVTLDSCMHKKNADGEEVGVDNEELVWVSTSGMGVAWLHVRVEAQPKYYCWQEY 272
            F A ++E PP++Y  L     PFE +++ +P+L  +      D + F+++F                 NG+ +  FD+LG DA L+VPC +   +K +++H  +++R A     +   +L+ +  ++ L    +KK              VW+STSG GV WLH+R++ +PKYY ++EY
Sbjct:  108 FNAVYFEAPPVTYNELNKK--PFEFVIINAPSLYNIT----EDKHAFKDHF-----------------NGNDVVAFDSLGGDARLIVPCPVSGCNKNTFAHLANFIRHAKKKQIASFWSLVGKEMKIKLKKDKNKK--------------VWMSTSGNGVYWLHLRLDDRPKYYNYKEY 249          
BLAST of NO17G02850 vs. NCBI_GenBank
Match: WP_036482177.1 (hypothetical protein [Myxosarcina sp. GI1])

HSP 1 Score: 90.9 bits (224), Expect = 7.200e-15
Identity = 62/179 (34.64%), Postives = 88/179 (49.16%), Query Frame = 0
Query:   94 FAAAFWECPPISYRLLTNTQIPFECMLLASPALERMAAQEDADDYPFREYFERQHRWREEKKKNGKGENGDSICVFDNLGRDATLVVPCYLGQGDKGSYSHFLSYLRAPSVPTSQKLALLQRVAQVTLDSCMHKKNADGEEVGVD-NEELVWVSTSGMGVAWLHVRVEAQPKYYCWQEY 272
            FAA FWE  P++    +  +  FE +L  SP L    AQ + D   F  YF    +                I  F NLG DA L+VP  L   D+ +Y H  +++R    P SQ+  L Q +               G+E+    N++ VWVSTSG+GV+WLHVR+++ PKYYC++ Y
Sbjct:   54 FAAYFWETLPVT---KSTVERKFEFVLANSPQL----AQINPDPSDFERYFSSAEK---------------EIVTFPNLGNDALLIVP--LPIADRSAYPHLAAFIR--EAPKSQQHLLWQTI---------------GKELKQKLNQQPVWVSTSGLGVSWLHVRLDSSPKYYCFEPY 191          
BLAST of NO17G02850 vs. NCBI_GenBank
Match: WP_099151001.1 (hypothetical protein [Lewinella nigricans] >PHN05424.1 hypothetical protein CRP01_15620 [Lewinella nigricans DSM 23189 = NBRC 102662])

HSP 1 Score: 90.5 bits (223), Expect = 9.500e-15
Identity = 64/185 (34.59%), Postives = 89/185 (48.11%), Query Frame = 0
Query:   87 EALQACTFAAAFWECPPISYRLLTNTQIPFECMLLASPALERMAAQEDADDYPFREYFERQHRWREEKKKNGKGENGDSICVFDNLGRDATLVVPCYLGQGDKGSYSHFLSYLRAPSVPTSQKLALLQRVAQVTLDSCMHKKNADGEEVGVDNEELVWVSTSGMGVAWLHVRVEAQPKYYCWQEY 272
            + L A  F A FWE PPI   + ++   PFE +L+ S AL R++    A    FR YF  +                + + VFDNLG DATLVVP    +G K +Y H   ++R    P SQ  A  Q V +                    ++ ++W+STSG+GV WLHVR+++ PKYY    Y
Sbjct:   46 DLLAAAPFPAFFWELPPI---VRSDLDRPFEFVLVNSNALARVSPMGQA----FRSYFHTE----------------EPVVVFDNLGGDATLVVP--TPKGKKSAYPHLGQFVR--HGPESQVDAFWQEVGRTYRQKI--------------SDTVLWLSTSGLGVYWLHVRLDSYPKYYTHGPY 189          
BLAST of NO17G02850 vs. NCBI_GenBank
Match: WP_053232475.1 (hypothetical protein [Sandaracinus amylolyticus] >AKF05213.1 hypothetical protein DB32_002362 [Sandaracinus amylolyticus])

HSP 1 Score: 90.1 bits (222), Expect = 1.200e-14
Identity = 60/173 (34.68%), Postives = 90/173 (52.02%), Query Frame = 0
Query:   94 FAAAFWECPPISYRLLTNTQIPFECMLLASPALERMAAQEDADDYPFREYFERQHRWREEKKKNGKGENGDSICVFDNLGRDATLVVPCYLGQGDKGSYSHFLSYLRAPSVPTSQKLALLQRVAQVTLDSCMHKKNADGEEVGVDNEELVWVSTSGMGVAWLHVRVEAQPKYY 267
            + A FWE PP++   L  T   +E  ++ +PAL R+     AD   F E FE               +  D + VF NLGRDATLVVP    +    SY+H  +++R    P++Q  AL  ++A+  L             +G   +  +WVST+G+GV+WLH+R++A+PKYY
Sbjct:   55 YDAFFWETPPLTTSTLATT---YEHAVIDAPALARIT----ADPSDFAERFE--------------SKPSDDVLVFPNLGRDATLVVPA--PRAADASYAHLAAFVR--GAPSAQVDALFAKLARAIL-----------ARIG---DAPLWVSTAGLGVSWLHLRLDARPKYY 188          
The following BLAST results are available for this feature:
BLAST of NO17G02850 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
WP_096385932.12.300e-1631.61hypothetical protein [Stanieria sp. NIES-3757] >BA... [more]
CBN75995.16.600e-1634.04conserved unknown protein [Ectocarpus siliculosus][more]
WP_006274640.16.600e-1632.97hypothetical protein [Asticcacaulis biprosthecium]... [more]
WP_015133968.18.600e-1635.45hypothetical protein [Leptolyngbya sp. PCC 7376] >... [more]
WP_006099925.18.600e-1635.48hypothetical protein [Coleofasciculus chthonoplast... [more]
WP_002653793.18.600e-1635.29hypothetical protein [Blastopirellula marina] >EAQ... [more]
OQS53519.15.500e-1529.61hypothetical protein EHP00_2479 [Enterocytozoon he... [more]
WP_036482177.17.200e-1534.64hypothetical protein [Myxosarcina sp. GI1][more]
WP_099151001.19.500e-1534.59hypothetical protein [Lewinella nigricans] >PHN054... [more]
WP_053232475.11.200e-1434.68hypothetical protein [Sandaracinus amylolyticus] >... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL159nonsL159Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR053ncniR053Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR028ngnoR028Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO17G02850.1NO17G02850.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO17G02850.1NO17G02850.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO17G02850 ID=NO17G02850|Name=NO17G02850|organism=Nannochloropsis oceanica|type=gene|length=894bp
ATGATCTTCCAATCGTCCAACTCCTCGACGCATTATGGTCTTGTCGCCAT
TGACGAAGCCACCGGCACGCCCGTGTCCTTCCTCCATGTACTCCAAGCTC
TGGCTAAGCCCATTTCGCCTACTTCATCATCGTATTTTTCTTCTCCTTCA
CCATCACACCCCTCATCAGCACCCGCATCCTCCTTCTCCTCCTCCACCAA
CACCACCTCCTCCACTTCGTCTTCACCCAGCACGCCGCATGCGACCACTC
TTCTCCTCGAAGCTTTACAAGCCTGTACATTCGCCGCAGCATTTTGGGAG
TGTCCGCCCATCTCTTATCGGCTTCTAACCAACACACAAATACCCTTTGA
GTGCATGCTTCTTGCATCTCCGGCCCTGGAGCGCATGGCAGCGCAAGAGG
ATGCGGATGATTATCCCTTTCGCGAATACTTCGAGAGACAGCACAGATGG
AGAGAGGAGAAAAAGAAAAATGGCAAGGGGGAAAATGGAGACAGCATCTG
TGTCTTTGACAACTTGGGAAGAGATGCCACATTAGTTGTACCTTGTTACC
TGGGGCAAGGCGACAAGGGCAGTTACAGCCACTTTCTCTCGTACCTTCGT
GCACCCTCCGTCCCTACCAGTCAAAAGCTCGCGCTCTTGCAGCGCGTCGC
ACAGGTGACACTGGACAGCTGCATGCACAAGAAAAACGCGGATGGGGAAG
AAGTTGGTGTCGATAATGAGGAGTTGGTGTGGGTGTCGACAAGTGGGATG
GGCGTGGCCTGGTTACACGTGCGGGTGGAGGCTCAACCCAAGTACTACTG
CTGGCAAGAGTACGTGGCACGAGGAGGGACAGGGACAAGAGAAGAGGGAG
ATGTACATGAGGGTGGTGGACGAAAGAGTGGAAAGAAATATTGA
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protein sequence of NO17G02850.1

>NO17G02850.1-protein ID=NO17G02850.1-protein|Name=NO17G02850.1|organism=Nannochloropsis oceanica|type=polypeptide|length=298bp
MIFQSSNSSTHYGLVAIDEATGTPVSFLHVLQALAKPISPTSSSYFSSPS
PSHPSSAPASSFSSSTNTTSSTSSSPSTPHATTLLLEALQACTFAAAFWE
CPPISYRLLTNTQIPFECMLLASPALERMAAQEDADDYPFREYFERQHRW
REEKKKNGKGENGDSICVFDNLGRDATLVVPCYLGQGDKGSYSHFLSYLR
APSVPTSQKLALLQRVAQVTLDSCMHKKNADGEEVGVDNEELVWVSTSGM
GVAWLHVRVEAQPKYYCWQEYVARGGTGTREEGDVHEGGGRKSGKKY*
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Synonyms
Publications