NO17G02570, NO17G02570 (gene) Nannochloropsis oceanica

Overview
NameNO17G02570
Unique NameNO17G02570
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2686
Alignment locationchr17:755531..758216 -

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Properties
Property NameValue
DescriptionRAB geranylgeranyl transferase beta subunit 1
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr17genomechr17:755531..758216 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0016740transferase activity
Vocabulary: INTERPRO
TermDefinition
IPR008930Terpenoid_cyclase/PrenylTrfase
IPR001330Prenyltrans
Homology
BLAST of NO17G02570 vs. NCBI_GenBank
Match: CBN76722.1 (putative Rab geranylgeranyl transferase type II beta subunit [Ectocarpus siliculosus])

HSP 1 Score: 266.2 bits (679), Expect = 1.600e-67
Identity = 170/259 (65.64%), Postives = 196/259 (75.68%), Query Frame = 0
Query:   49 TFYEAKHVAFIRGLMDKTDSFEHIVMEHLKMSAVYWALMGMALMGRDLEAEMKLSEIVEWVLLCQHPNGGFGGNTGHDPHLLYTLSAIQILAIAGQLHRVDQ--DXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCIPGAESHAGQVFTCVGTLAIGEGVKEYIDEELLGWWLCERQCDSGGLNGRPEKQADVCYSWWILSALSILGKIDWIDRARLKSFILAC 306
            +F+E  H  ++  + ++TD+FE  + EHL+MS VYW LMGMALMGRDL  EM   ++  WV+ CQH  GGFGGN GHDPH+LYTLSA+Q++A+ G+L RVD+   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                       CIPGAESHAGQ+FTCVG L+I   +   +DE LLGWWLCERQCDSGGLNGRPEKQADVCYSWWILS+L ILGK+DWID ARLK FIL C
Sbjct:   21 SFFEELHRQYVIRISEQTDTFEFCMTEHLRMSGVYWGLMGMALMGRDLRKEMGAEDLASWVMRCQHEGGGFGGNEGHDPHILYTLSALQVMALLGELDRVDKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGKIDVKKAAEFVGRCRNFDGGFGCIPGAESHAGQIFTCVGALSIARSL-HLVDEGLLGWWLCERQCDSGGLNGRPEKQADVCYSWWILSSLKILGKVDWIDGARLKGFILRC 278          
BLAST of NO17G02570 vs. NCBI_GenBank
Match: XP_009039326.1 (hypothetical protein AURANDRAFT_30070 [Aureococcus anophagefferens] >EGB06072.1 hypothetical protein AURANDRAFT_30070 [Aureococcus anophagefferens])

HSP 1 Score: 238.4 bits (607), Expect = 3.700e-59
Identity = 191/343 (55.69%), Postives = 226/343 (65.89%), Query Frame = 0
Query:   47 ESTFYEAKHVAFIRGLMDKTDSFEHIVMEHLKMSAVYWALMGMALMGRDLEAEMKLSEIVEWVLLCQHPNGGFGGNTGHDPHLLYTLSAIQILAIAGQL-----HRVDQDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCIPGAESHAGQVFTCVGTLAIGEGVKEYIDEELLGWWLCERQCDSGGLNGRPEKQADVCYSWWILSALSILGKIDWIDRARLKSFILACQDKEXXXXXXXXXXXXXXXXXXXXXXXXXLLHYFEDEDRRXXXXXXXXXXXXXARYRGIDPVFALPVDVVEALALKSEV 385
            E+ F++ KH +++  +   T++ E ++ E+++MS VYW L  MAL+GRD+  EM    +V WVL CQHP GGFGG  GHDPHLLYTLSA+QILA+ G L           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                               +PGAESHAGQ+F CVG LAI + + + +D  LLGWWL ERQCDSGGLNGRPEKQADVCYSWWILS+L+ILG+  WID A+L +FIL CQ   XXXXXXXXXXXXXXXXXXXXXXXXX L +F+                  A    IDPVFALP  +V  L L++ V
Sbjct:   17 EAVFHDEKHASYLVAVSKNTEAIEFVLTEYMRMSGVYWGLTAMALLGRDVHKEMDGDAVVAWVLRCQHPCGGFGGGEGHDPHLLYTLSALQILALLGALDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXELWNRSPPLIDVAKAVDFVDRCRNFDGGYGAVPGAESHAGQIFCCVGALAIAKRL-DLVDGTLLGWWLAERQCDSGGLNGRPEKQADVCYSWWILSSLTILGRSHWIDEAKLAAFILECQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSWFD--------------GTAYAGRPAIDPVFALPAPLVAELGLEASV 344          
BLAST of NO17G02570 vs. NCBI_GenBank
Match: XP_024585810.1 (geranylgeranyl transferase type-2 subunit beta [Plasmopara halstedii] >CEG49441.1 geranylgeranyl transferase type-2 subunit beta [Plasmopara halstedii])

HSP 1 Score: 221.5 bits (563), Expect = 4.600e-54
Identity = 172/243 (70.78%), Postives = 201/243 (82.72%), Query Frame = 0
Query:   50 FYEAKHVAFIRGLMDKTDSFEHIVMEHLKMSAVYWALMGMALMGRDLEAEMKLSEIVEWVLLCQHPNGGFGGNTGHDPHLLYTLSAIQILAIAGQLHRVDQDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCIPGAESHAGQVFTCVGTLAIGEGVKEYIDEELLGWWLCERQCDSGGLNGRPEKQADVCYSWWILSALSILGKIDW 293
            F  A HV ++ GL +KT+ FE  + EH+++S +YW +  MAL+ R  EA+M+ +EIV+WVL C+HP GGF GN GHD HLLYTL A+ +LA+ G L R    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX IPG ESH G +FT VG L++G  ++EY+DEELLGWWLCERQCDSGGLNGRPEKQADVCYSWW +S+L ++GKIDW
Sbjct:   14 FNLALHVKYLVGLKNKTEDFESCMTEHMRVSGLYWGVGAMALLNR--EADMEPAEIVDWVLQCEHPEGGFSGNVGHDRHLLYTLHALLVLAMLGALDRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIPGCESHGGHIFTAVGALSLGFALEEYVDEELLGWWLCERQCDSGGLNGRPEKQADVCYSWWNISSLIMIGKIDW 254          
BLAST of NO17G02570 vs. NCBI_GenBank
Match: KHG12070.1 (Geranylgeranyl transferase type-2 subunit beta [Gossypium arboreum])

HSP 1 Score: 220.7 bits (561), Expect = 7.900e-54
Identity = 137/329 (41.64%), Postives = 177/329 (53.80%), Query Frame = 0
Query:   54 KHVAFIRGLMDKTDSFEHIVMEHLKMSAVYWALMGMALMGRDLEAEMKLSEIVEWVLLCQHPNGGFGGNTGHDPHLLYTLSAIQILAIAGQLHRVDQD----XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCIPGAESHAGQVFTCVGTLAIGEGVKEYIDEELLGWWLCERQCDSGGLNGRPEKQADVCYSWWILSALSILGKIDWIDRARLKSFILACQDKEXXXXXXXXXXXXXXXXXXXXXXXXXLLHYFEDEDRRXXXXXXXXXXXXXARYRGIDPVFALPVDVVEAL 379
            KHV +I  +    DSFE +VM+HL+M+  YW L  + L+G+ L++ + + E++ W+L CQH +GGF GN GHDPH+LYTLSA+Q+LA+  +L  +D D                                                                     C PG ESHAGQ+F CVG LA+  G   Y+D++LLGWWLCERQ  SGGLNGRPEK  DVCYSWW+LS+L ++ ++ WID+ +L  FIL CQD  XXXXXXXXXXXXXXXXXX       LL+Y                       + IDP +ALPVDVV+ L
Sbjct:    8 KHVKYILSVEKNKDSFESVVMDHLRMNGAYWGLTALDLLGK-LDS-VNVDEVISWILKCQHESGGFSGNIGHDPHILYTLSAVQVLALFNKLDVLDIDKVATFSKLDITGLQNEDGSFSGDMWGEVDTRFSYIAICCLSILCCLDKINVEKAVSYILSCKNLDGGFGCTPGGESHAGQIFCCVGALAL-TGSLHYVDKDLLGWWLCERQVKSGGLNGRPEKLPDVCYSWWVLSSLIMIDRVHWIDKEKLVKFILDCQDVXXXXXXXXXXXXXXXXXXXFGVAGLSLLNY--------------------PGLKAIDPAYALPVDVVDVL 313          
BLAST of NO17G02570 vs. NCBI_GenBank
Match: KJB31780.1 (hypothetical protein B456_005G208400 [Gossypium raimondii])

HSP 1 Score: 220.3 bits (560), Expect = 1.000e-53
Identity = 136/325 (41.85%), Postives = 176/325 (54.15%), Query Frame = 0
Query:   54 KHVAFIRGLMDKTDSFEHIVMEHLKMSAVYWALMGMALMGRDLEAEMKLSEIVEWVLLCQHPNGGFGGNTGHDPHLLYTLSAIQILAIAGQLHRVDQDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCIPGAESHAGQVFTCVGTLAIGEGVKEYIDEELLGWWLCERQCDSGGLNGRPEKQADVCYSWWILSALSILGKIDWIDRARLKSFILACQDKEXXXXXXXXXXXXXXXXXXXXXXXXXLLHYFEDEDRRXXXXXXXXXXXXXARYRGIDPVFALPVDVVEAL 379
            KHV +I  +    DSFE +VM+HL+M+  YW L  + L+G+ L++ + + E++ W+L CQH +GGF GN GHDPH+LYTLSA+Q+LA+  +L  +D D                                                                 C PG ESHAGQ+F CVG LA+  G   Y+D++LLGWWLCERQ  SGGLNGRPEK  DVCYSWW+LS+L ++ ++ WID+ +L  FIL CQD  XXXXXXXXXXXXXXXXXX       LL+Y                       + IDP +ALPVDVV  +
Sbjct:    8 KHVKYILAVEKNKDSFESVVMDHLRMNGAYWGLTALDLLGK-LDS-VNVDEVISWILKCQHESGGFSGNIGHDPHILYTLSAVQVLALFNKLDVLDID--------KVATYGSFSGDMWGEVDTRFSYIAICCLSILCCLDKINVEKAVSYILSCKNLDGGFGCTPGGESHAGQIFCCVGALAL-TGSLHYVDKDLLGWWLCERQVKSGGLNGRPEKLPDVCYSWWVLSSLIMIDRVHWIDKEKLVKFILDCQDVXXXXXXXXXXXXXXXXXXXFGVAGLSLLNY--------------------PGLKAIDPAYALPVDVVNRI 301          
BLAST of NO17G02570 vs. NCBI_GenBank
Match: XP_008610476.1 (geranylgeranyl transferase type-2 subunit beta [Saprolegnia diclina VS20] >EQC36370.1 geranylgeranyl transferase type-2 subunit beta [Saprolegnia diclina VS20])

HSP 1 Score: 219.2 bits (557), Expect = 2.300e-53
Identity = 202/336 (60.12%), Postives = 247/336 (73.51%), Query Frame = 0
Query:   50 FYEAKHVAFIRGLMDKTDSFEHIVMEHLKMSAVYWALMGMALMGRDLEAEMKLSEIVEWVLLCQHPNGGFGGNTGHDPHLLYTLSAIQILAIAGQLHRVDQDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCIPGAESHAGQVFTCVGTLAIGEGVKEYIDEELLGWWLCERQCDSGGLNGRPEKQADVCYSWWILSALSILGKIDWIDRARLKSFILACQDKEXXXXXXXXXXXXXXXXXXXXXXXXXLLHYFEDEDRRXXXXXXXXXXXXXARYRGIDPVFALPVDVVEALALKSEVL 386
            F+   H+ ++  L  + +S E  + EH+++S  YWA+  +A +G++       + +++W++ CQHPNGGFGGN GHD HLLYT  A+  LA+ G+   V  D   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX IPG ESH G +FT VG LA+G+ + +Y+D   LGWWLCERQCDSGGLNGRPEKQADVCYSWW +S+L +LGK+ WI+R +L  FIL CQDKEXXXXXXXXXXXXXXXXXXXXXXXXX   YF+ ++                 ++ I PVFA+P   VE L L +++L
Sbjct:    9 FFLGAHLKYVANLSKQKESLESCMSEHMRVSGFYWAVGCLAALGKEAATP---APLIDWLIACQHPNGGFGGNLGHDRHLLYTCHAVLALAMLGRESVVLVDETAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIPGCESHGGHIFTAVGALAMGQQLHQYVDANGLGWWLCERQCDSGGLNGRPEKQADVCYSWWNISSLVLLGKLHWINREKLIQFILNCQDKEXXXXXXXXXXXXXXXXXXXXXXXXXXXXYFDGKE-------------DFGGFQRIHPVFAIPERDVERLQLTAQIL 328          
BLAST of NO17G02570 vs. NCBI_GenBank
Match: XP_016499560.1 (PREDICTED: geranylgeranyl transferase type-2 subunit beta-like isoform X2 [Nicotiana tabacum])

HSP 1 Score: 218.8 bits (556), Expect = 3.000e-53
Identity = 121/327 (37.00%), Postives = 159/327 (48.62%), Query Frame = 0
Query:   54 KHVAFIRGLMDKTDSFEHIVMEHLKMSAVYWALMGMALMGRDLEAEMKLSEIVEWVLLCQHPNGGFGGNTGHDPHLLYTLSAIQILAIAGQLHRVDQDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCIPGAESHAGQVFTCVGTLAIGEGVKEYIDEELLGWWLCERQCDSGGLNGRPEKQADVCYSWWILSALSILGKIDWIDRARLKSFILACQDKEXXXXXXXXXXXXXXXXXXXXXXXXXLLHYFEDEDRRXXXXXXXXXXXXXARYRGIDPVFALPVDVVEALAL 381
            +HVA+I  +  + D FE +VMEHL+++  YW L  + ++G+ L+A  K  E++ WV+ CQH +GGFGGN GHDPH+LYTLSAIQ+LA+       ++D                                                                 C PGAESHAGQ+F CVG LAI  G   ++D++LLGWWLCERQ  SGGLNGRPEK  DVCYSWW+LS+L ++ ++ WID+ +L  FIL CQDKE                         LL Y                       + IDP +ALPV VV  + L
Sbjct:   48 RHVAYILTVEKRKDDFESVVMEHLRLNGAYWGLTTLDILGK-LDAVDK-DEVISWVMQCQHESGGFGGNIGHDPHMLYTLSAIQVLALFDIAGLQNED-------------GSFSGDMWGEVDTRFSYIAICSLALLRQLDKIDVGKAVKYIVSCKNVDGGFGCTPGAESHAGQIFCCVGALAI-TGSLHHVDKDLLGWWLCERQVKSGGLNGRPEKLPDVCYSWWVLSSLIMIDRVHWIDKEKLAKFILDCQDKEKGGISDRPDDAVDVFHTYFGVAGLSLLEY--------------------PGLKPIDPAYALPVSVVNKVIL 338          
BLAST of NO17G02570 vs. NCBI_GenBank
Match: XP_009839296.1 (hypothetical protein H257_13475 [Aphanomyces astaci] >ETV71050.1 hypothetical protein H257_13475 [Aphanomyces astaci])

HSP 1 Score: 217.2 bits (552), Expect = 8.700e-53
Identity = 163/337 (48.37%), Postives = 207/337 (61.42%), Query Frame = 0
Query:   49 TFYEAKHVAFIRGLMDKTDSFEHIVMEHLKMSAVYWALMGMALMGRDLEAEMKLSEIVEWVLLCQHPNGGFGGNTGHDPHLLYTLSAIQILAIAGQLHRVDQDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCIPGAESHAGQVFTCVGTLAIGEGVKEYIDEELLGWWLCERQCDSGGLNGRPEKQADVCYSWWILSALSILGKIDWIDRARLKSFILACQDKEXXXXXXXXXXXXXXXXXXXXXXXXXLLHYFEDEDRRXXXXXXXXXXXXXARYRGIDPVFALPVDVVEALALKSEVL 386
            TF+ A H+ ++  L  + +S E  + EHL++SA YWA   +  +G+   A     E+++W+L CQHPNGGFGGN GHD HLLYT  A+  L + G+       XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX             XXX    IPG ESH G +FT VG L++G  + +Y+D + LGWWLCERQCDSGGLNGRPEKQADVCYSWW +S L ++GK+ WI++ +L  FIL CQDK+                         +L YF+D+                A  + + PVFA+P   V  L L ++++
Sbjct:   18 TFFLATHLKYLANLSKQKESLESCLSEHLRVSAFYWAAGSLCALGK---AHHIPDELIQWLLACQHPNGGFGGNVGHDRHLLYTCHAVLSLVMLGKEDHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMDAAMAHIKTCQNXXXGFGNIPGCESHGGHIFTAVGALSMGHQLDKYVDVDSLGWWLCERQCDSGGLNGRPEKQADVCYSWWNISCLVMMGKLHWINKDKLIQFILNCQDKDDGGIADRPGNVSDIFHTFFGICGLSMLGYFDDQ-------------PAFAAIKKVHPVFAIPDADVARLGLTAQII 338          
BLAST of NO17G02570 vs. NCBI_GenBank
Match: XP_008869508.1 (hypothetical protein H310_06282 [Aphanomyces invadans] >ETW01660.1 hypothetical protein H310_06282 [Aphanomyces invadans])

HSP 1 Score: 217.2 bits (552), Expect = 8.700e-53
Identity = 183/338 (54.14%), Postives = 225/338 (66.57%), Query Frame = 0
Query:   49 TFYEAKHVAFIRGLMDKTDSFEHIVMEHLKMSAVYWALMGMALMGRDLEAEMKLSEIVEWVLLCQHPNGGFGGNTGHDPHLLYTLSAIQILAIAGQLHRVDQDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCIPGAESHAGQVFTCVGTLAIGEGVKEYIDEELLGWWLCERQCDSGGLNGRPEKQADVCYSWWILSALSILGKIDWIDRARLKSFILACQDKEXXXXXXXXXXXXXXXXXXXXXXXXXLLHYFED-EDRRXXXXXXXXXXXXXARYRGIDPVFALPVDVVEALALKSEVL 386
            TFY   H+ ++  L  + +S E  + EHL++SA YWA   +  +G+   A     E+++W+L CQHPNGGFGGN GHD HLLYT  A+  L + G+  +V   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX IPG ESH G +FT VG L++G+ + +Y+D + LGWWLCERQCDSGGLNGRPEKQADVCYSWW +S L ++GK+ WI+  +L  FIL CQDK+                         +L YF+  ED+              A  + I PVFA+P   V  L L +++L
Sbjct:    9 TFYLDTHLKYLANLSKQKESLESCLSEHLRVSAFYWAAGSLCALGK---AHHIPDELIQWLLACQHPNGGFGGNIGHDRHLLYTCHAVLSLVMLGKEDQVLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIPGCESHGGHIFTAVGALSMGQQLDKYVDVDTLGWWLCERQCDSGGLNGRPEKQADVCYSWWNISCLVMMGKLHWINTDKLIQFILNCQDKDDGGIADRPGNVSDIFHTFFGICGLSMLGYFDSCEDK-----------ARFAAIKKIHPVFAIPDADVARLGLTAQIL 332          
BLAST of NO17G02570 vs. NCBI_GenBank
Match: OQR87902.1 (geranylgeranyl transferase type-2 subunit beta [Achlya hypogyna])

HSP 1 Score: 216.9 bits (551), Expect = 1.100e-52
Identity = 181/336 (53.87%), Postives = 219/336 (65.18%), Query Frame = 0
Query:   50 FYEAKHVAFIRGLMDKTDSFEHIVMEHLKMSAVYWALMGMALMGRDLEAEMKLSEIVEWVLLCQHPNGGFGGNTGHDPHLLYTLSAIQILAIAGQLHRVDQDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCIPGAESHAGQVFTCVGTLAIGEGVKEYIDEELLGWWLCERQCDSGGLNGRPEKQADVCYSWWILSALSILGKIDWIDRARLKSFILACQDKEXXXXXXXXXXXXXXXXXXXXXXXXXLLHYFEDEDRRXXXXXXXXXXXXXARYRGIDPVFALPVDVVEALALKSEVL 386
            F+   H+ ++  L  + +S E  + EH+++S  YWA+  +A +G++      L   V+WVL CQHPNGGFGGN GHD HLLYT  AI  L + G+ + V  D    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX IPG ESH G +FT VG L++G  + +Y D   LGWWLCERQCDSGGLNGRPEKQADVCYSWW +S+L  LGK+ WI++ +L  FIL CQDK                          LL YFE ++               A ++ I P+FA+P   VE L L ++VL
Sbjct:    8 FFLQAHLQYVANLSKQKESLESCMSEHMRVSGFYWAVGCLAALGKEAATPPAL---VDWVLACQHPNGGFGGNLGHDRHLLYTCHAILALVMLGKENAVLVDETAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNIPGCESHGGHIFTAVGALSMGHQLDKYADANGLGWWLCERQCDSGGLNGRPEKQADVCYSWWNISSLVALGKLHWINKDKLIQFILNCQDKADGGIADRPGNVADIYHTFFGICGLSLLGYFEGKEE-------------FAGFQRIHPIFAIPHRDVERLNLHAQVL 327          
The following BLAST results are available for this feature:
BLAST of NO17G02570 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
CBN76722.11.600e-6765.64putative Rab geranylgeranyl transferase type II be... [more]
XP_009039326.13.700e-5955.69hypothetical protein AURANDRAFT_30070 [Aureococcus... [more]
XP_024585810.14.600e-5470.78geranylgeranyl transferase type-2 subunit beta [Pl... [more]
KHG12070.17.900e-5441.64Geranylgeranyl transferase type-2 subunit beta [Go... [more]
KJB31780.11.000e-5341.85hypothetical protein B456_005G208400 [Gossypium ra... [more]
XP_008610476.12.300e-5360.12geranylgeranyl transferase type-2 subunit beta [Sa... [more]
XP_016499560.13.000e-5337.00PREDICTED: geranylgeranyl transferase type-2 subun... [more]
XP_009839296.18.700e-5348.37hypothetical protein H257_13475 [Aphanomyces astac... [more]
XP_008869508.18.700e-5354.14hypothetical protein H310_06282 [Aphanomyces invad... [more]
OQR87902.11.100e-5253.87geranylgeranyl transferase type-2 subunit beta [Ac... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL160nonsL160Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR053ncniR053Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR029ngnoR029Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR028ngnoR028Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK008426NSK008426Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO17G02570.1NO17G02570.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|674049gene_9324Nannochloropsis oceanica (N. oceanica CCMP1779)gene
RGTB2gene6330Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO17G02570.1NO17G02570.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO17G02570 ID=NO17G02570|Name=NO17G02570|organism=Nannochloropsis oceanica|type=gene|length=2686bp
TCTCGCTCCAATGATTAAAAAACTTCTTGACAAGGTAGAGGCGGACGTAA
ATACACACAGGGGTGGTCGGACTGAGTAGTTGGACTAGGACTAGGATGGT
GCTGCCTTCAGGCTGCTCACCTGCTTGCCGGCAGCTTGCATCAATCGCTG
TCATCACTCGGTCGACCGTTGCCCCACCTAACAGGTCCCCTCCCCCCCAT
CCGAAGCTAGACAGGCCTGACGAGGACAAGGTCAGCAATGAGCGAGGCGC
CGTCACCACCATCGCCTCCACAAGGAGGAGGCGATGGAGGGGGAAAAGGA
GCAGCAGGAACTGCAGAAGCAGAAGCAGCTGCAGGAAAGGCATCGCCACA
GGGAGAGGAGGAGGAGGGGGGGGCAGAGTCAACTTTCTACGAAGCGAAGC
ACGTGGCCTTCATCAGGGGATTAATGGACAAGACAGACTCTTTCGAGCAC
ATTGTCATGGAGCATCTCAAGgtatggtgagagggagggtcgaaacaatc
ggttggttgggcacgaacaacaggcgtctgcatggaccatcctcattccc
ctaaactccctccctccttccctccctccctccctccttgcccgcgtttc
ttagATGTCCGCCGTATATTGGGCTTTGATGGGCATGGCCCTTATGGGTC
GAGACCTAGAGGCTGAAATGAAGCTGAGTGAGATCGTAGAGTGGGTGCTT
CTGTGCCAGCACCCTAATGGCGGgtaggtcatgtcgacaagcttcccttc
ctttccttcctccctccctccctctattaatttaatagatcacatcggct
ggtttttgtacccacctcctcctttctgccttgcctttcctctttcgctg
tcttcatcgtcagggcattcccacagagtgtttgttcccaagcagtctca
cacccctccctccctccctcccctcctccctccctaaatcagCTTCGGAG
GCAACACCGGCCATGACCCCCACTTGCTTTACACGCTCTCAGCCATTCAA
ATCCTGGCCATCGCGGGGCAGTTGCATAGAGTAGACCAGGATAAAGTGGC
AGGATATGTGTTGGGATTGCAGCAGgtaggggcgaaggaagggggggagg
aagggagggagggtggagggggacatttcatataggctggctttggcagt
tgatatccctcccaccttcccacctcccctacttctttccctctcaccta
tcttgcagCCTGATGGTTCTTTCACGGGCGACGAGTGGGGGGAGGTTGAC
ACCCGCTTCTCTTACTGTGGCTTGTCGACGCTGGCCTTGCTGGGACGACT
GTCGATGGCGGgtgagggagggagaaagggagggaaggaggaagggtgag
gatagcgtgcaggacgaccggacacacacagacactcagcgtcccctccc
tccctccctccctccctccctccctccctccctccctccctcccttccct
ccctccctccctccctccctctccctatagACCTCCCCAAGGCCAAGGCC
TTTGTGGGCGCCTGTCGAAATTTCGACGGCGGCTTCGGCTGTATCCCGGG
CGCCGAGAGCCACGCAGGGCAGgtgatggagggaggaaggaagggaggga
gggagagagaagtgataaaaagagacgagggagggcgggaaggagagtgg
ctacgtgccaatccgtacgatgtcaccatttcccattgtcttttatttcc
tccctccctccctcgcctcccttcctccctagGTGTTCACCTGCGTAGGC
ACACTGGCCATAGGGGAGGGAGTGAAGGAGTACATAGACGAGGAGCTGCT
GGGATGGTGGTTGTGTGAGCGACAGTGCGACTCCGGAGGGCTCAATGGCC
GCCCCGAGAAACAGgtggggagggagggagggagggagggagggagggag
gcagggaggcagggagggaggaggggaggaggggagggagggagggaggg
accgacctgcgtaacggaaatctaacccatccacctaattaccctccctc
cctccctccctccctccctcccttatccccaaaagGCTGACGTCTGCTAC
TCCTGGTGGATCCTCTCGGCCCTGTCGATCCTTGGGAAGATCGATTGGAT
AGATCGGGCACGACTCAAGgtagggagggaaggaaggagggagggaggga
gggagggagggagggaggacggtcgtagtggtgttacctcttgcttgtct
ttttgcaattaataacggttattgacggatatctcgctccttctctctct
tccccacccctccctcccttcctccttccctcagTCCTTCATCCTCGCCT
GCCAGGACAAGGAAGACGGAGGCATCAGCGACCGACCCGGCAATGTAGCA
Ggtacgtccctccctccctccctccctccctccctccctccctccctccc
tccctctctccttcccctccttccttcctccctccctccctgagactctc
ccctccctccctcccttcctccatccctgcaagACGTCTTTCACACCTTT
TTTGGGATCGCGGGCTTGGCCCTCCTCCACTACTTCGAGGACGAGGACAG
GAGGGAGGGAGGGAGGGAGGGCGGGAGGGAGGGAGGGAGGTATGCGCGTT
ACAGGGGAATTGATCCTGTGTTTGCCTTACCAGTGGATGTGGTTGAGGCC
CTAGCGTTGAAGAGTGAAGTGTTAGGGGAGGGGTGA
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protein sequence of NO17G02570.1

>NO17G02570.1-protein ID=NO17G02570.1-protein|Name=NO17G02570.1|organism=Nannochloropsis oceanica|type=polypeptide|length=389bp
MSEAPSPPSPPQGGGDGGGKGAAGTAEAEAAAGKASPQGEEEEGGAESTF
YEAKHVAFIRGLMDKTDSFEHIVMEHLKMSAVYWALMGMALMGRDLEAEM
KLSEIVEWVLLCQHPNGGFGGNTGHDPHLLYTLSAIQILAIAGQLHRVDQ
DKVAGYVLGLQQPDGSFTGDEWGEVDTRFSYCGLSTLALLGRLSMADLPK
AKAFVGACRNFDGGFGCIPGAESHAGQVFTCVGTLAIGEGVKEYIDEELL
GWWLCERQCDSGGLNGRPEKQADVCYSWWILSALSILGKIDWIDRARLKS
FILACQDKEDGGISDRPGNVADVFHTFFGIAGLALLHYFEDEDRREGGRE
GGREGGRYARYRGIDPVFALPVDVVEALALKSEVLGEG*
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Synonyms
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