NO17G02490, NO17G02490 (gene) Nannochloropsis oceanica

Overview
NameNO17G02490
Unique NameNO17G02490
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1746
Alignment locationchr17:734916..736661 +

Link to JBrowse

Properties
Property NameValue
DescriptionDNA repair protein rhp41
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr17genomechr17:734916..736661 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003684damaged DNA binding
GO:0003677DNA binding
GO:0003684damaged DNA binding
GO:0003677DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006289nucleotide-excision repair
GO:0006289nucleotide-excision repair
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
GO:0005634nucleus
Vocabulary: INTERPRO
TermDefinition
IPR038765Papain_like_cys_pep_sf
IPR004583DNA_repair_Rad4
IPR018325Rad4/PNGase_transGLS-fold
IPR018328Rad4_beta-hairpin_dom3
IPR018327BHD_2
IPR018326Rad4_beta-hairpin_dom1
Homology
BLAST of NO17G02490 vs. NCBI_GenBank
Match: KNZ73151.1 (DNA repair protein rhp41 [Termitomyces sp. J132])

HSP 1 Score: 181.4 bits (459), Expect = 8.000e-42
Identity = 132/419 (31.50%), Postives = 204/419 (48.69%), Query Frame = 0
Query:  144 PQSLPPSIPS---SKGNDRWVALDVLRGRLDDPCSHERSLLSSRPSSLLPSSSTSQWLYVLGVDNEGWLTDVTRRYSTRWSRALRFRAG-------------EWWAGYLEQANSALAHRREARLLEKGDFRSFFEFETARDLERDELNEAETKEPMPTTWAGFEKHQKYVLERHLKRWEVIGVEDGEEGGKKGRRKVLGMFKGECVYDRRKVQEGATVRQWLQKHGRQVREGEKPCRIVESKSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPDALELYGFWQTERYQPPALLPNGRIPVNEHGNIEVWNHNPVFLPKGTAHVWGEGGGEWAVAQKLGVRYARAVVGWEVRQGRTLPVVEGVVVRKEDEGVLRDGLRAWQVGKEEKAAKAKEKRVVERWARFVKGLRIARDLQKKY 547
            P+  PP   +   S+ + RW+ +D +R  +     ++R +    P+S  P    ++ +YVLG++ +G+  DVTRRY+ ++S  +    G              WW   L          R  RL+               D+E +ELN A+  E MPTT +GF+ H  YVL RHLK+ +VI   D  E         LG F+GE VY R  V    T   W++  GR V+EG +P ++V+ ++                                     LY   QTE Y+P  ++ +G++P N  GNI++  + P  LP+G AHV  +G  +  +A+KLG  +A AV G+E ++ R  PVVEGVVV +E+E VL       +   EEKA   +++RV+++W R ++GLR+ R LQ +Y
Sbjct:  317 PRKTPPVFWTEVFSRPDGRWIPVDPIRSIV-----NKRKVFDPTPTS-APPPPENRMMYVLGLEEDGYARDVTRRYAKQFSAKIAKVQGGSSSIGGGGKARQAWWEAVLSIVT------RPYRLIRD-------------DVEDEELNAAQMTEGMPTTISGFKDHPIYVLARHLKQNQVIHPPDTPE---------LGRFRGEAVYSRSAVVSLKTAENWMRSEGRMVKEGSQPLKMVKVRAGTINRMRELEVMKDELREAGEPSMGVGETMQG-----LYARRQTELYKPDPVI-DGKVPKNNFGNIDL--YVPSMLPRGAAHVPFKGVAK--IAKKLGFDFAEAVTGFEFKKRRAFPVVEGVVVAQENEAVLLQVYWEAEQDAEEKARGKRKERVIKQWTRLIQGLRVRRRLQAQY 691          
BLAST of NO17G02490 vs. NCBI_GenBank
Match: GAT55865.1 (predicted protein [Mycena chlorophos])

HSP 1 Score: 179.5 bits (454), Expect = 3.000e-41
Identity = 130/413 (31.48%), Postives = 204/413 (49.39%), Query Frame = 0
Query:  144 PQSLPPSIPS---SKGNDRWVALDVLRGRLDDPCSHERSLLSSRPSSLLPSSSTSQWLYVLGVDNEGWLTDVTRRYSTRWS-RALRF---RAGEWWAGYLEQANSALAHRREARLLEKGDFRSFFEFETARDLERDELNEAETKEPMPTTWAGFEKHQKYVLERHLKRWEVIGVEDGEEGGKKGRRKVLGMFKGECVYDRRKVQEGATVRQWLQKHGRQVREGEKPCRIVESKSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPDALELYGFWQTERYQPPALLPNGRIPVNEHGNIEVWNHNPVFLPKGTAHVWGEGGGEWAVAQKLGVRYARAVVGWEVRQGRTLPVVEGVVVRKEDEGVLRDGLRAWQVGKEEKAAKAKEK---RVVERWARFVKGLRIARDLQKKY 547
            P + PP   +   S+ + RW  +D +R R++ P   + +  S  P++L    + ++ +YVL  +++G+  DVTRRY+ R++ R ++    R   WWA  +E         R+                   D+E  EL+  +  E MPTT AGF+ H  YVL RHL + + I              + +G F+GE VY R  V    T   WL+  GR +REGE+P ++V++++                                     LY F QTE Y P  ++ +G IP N  GNI++  + P  LP G AH+  +G  +  +A++LG  YA AV+G+E R  R  PV+ G+VV +E+E  +   L A+   +++ AAKA+ K   RV++RW R V GLRI + LQ++Y
Sbjct:  316 PATTPPVFWTEVFSRPDGRWFPVDPIRNRVNQPKDFDPATASGDPATLKRIQAENRMVYVLAFEDDGFARDVTRRYAKRFTERVVKMQGARQAAWWARVVEGVTRPYRLNRD-------------------DVEDAELDTVQLLEGMPTTIAGFKDHPMYVLTRHLTQTQTI-------HPPPPLTREVGKFRGEPVYPRSAVVSLKTAENWLRSAGRSIREGEQPLKLVKARAATLGRMREVAVMKDGLRTAGEDDQGEVMTG-------LYAFSQTELYVPDPVV-DGVIPKNNFGNIDL--YVPSMLPAGAAHIPYKGTAK--LAKQLGFDYAEAVIGFEFRNRRATPVINGIVVAEENESAI---LEAYWEAEQDAAAKARAKKRDRVLKRWVRLVHGLRIRQSLQEEY 687          
BLAST of NO17G02490 vs. NCBI_GenBank
Match: EGN98589.1 (hypothetical protein SERLA73DRAFT_92039 [Serpula lacrymans var. lacrymans S7.3])

HSP 1 Score: 172.2 bits (435), Expect = 4.800e-39
Identity = 137/427 (32.08%), Postives = 210/427 (49.18%), Query Frame = 0
Query:  144 PQSLPPSIPS---SKGNDRWVALDVLRGRLDDPCSHERSLLSSRPS-SLLPSSST----SQWLYVLGVDNEGWLTDVTRRYSTRWSRALR----------FRAGEWWAGYLEQANSALAHRREARLLEKGDFRSFFEFETARDLERDELNEAETKEPMPTTWAGFEKHQKYVLERHLKRWEVIGVEDGEEGGKKGRRKVLGMFKGECVYDRRKVQEGATVRQWLQKHGRQVREGEKPCRIVESKSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPDALELYGFWQTERYQPPALLPNGRIPVNEHGNIEVWNHNPVFLPKGTAHVWGEGGGEWAVAQKLGVRYARAVVGWEVRQGRTLPVVEGVVVRKEDEGVLRDGLRAWQVGKEEKAAKAKEKRVVERWARFVKGLRIARDLQKKYGEGGRR 553
            P ++PP   +   S+ + RW+ +D +RG +     ++R +    PS S  P+S+T    ++ LYV+ ++ +G+  DVT RY+  ++  +            R  EWW              R  R++ +      +  E   DLE DEL+  +  E MPTT AGF+ H  YVL RHL+R EVI                LG F+GE VY R  V    T   W+ + GR+VREG +P ++V+ ++                                     +Y   QTE YQP  ++ +G+IP N+ GNI++  + P  LPKG AH+  +G  +  +A+KLG  YA AV G+E R+ R  PV+EG+VV  E+E VL +     +   EEKA   ++++V++RW R + GLRI + LQK+Y     R
Sbjct:  362 PLTIPPVFWTEVFSRADLRWLPVDPIRGIV-----NKRKIFDPLPSTSAGPASATGRQENRMLYVISLEEDGYGRDVTPRYARDYTAKVAKVQGVGSGAGGRRKEWW-------------ERVVRIITRP-----YRLE-RDDLEDDELHNHQLTEGMPTTIAGFKDHPLYVLARHLRREEVIDPP-----------TELGKFRGEPVYPRSSVISLKTAENWM-RQGRKVREGCQPMKMVKQRAATVNKRREIELALERAREDGSGGAGEEEMLQG-----MYARSQTELYQPEPII-DGKIPKNDFGNIDL--YVPTMLPKGGAHIPFKGVAK--IARKLGFDYAEAVTGFEFRKQRANPVIEGIVVASENEAVLLEAYWEAEQNAEEKARIKRQEQVLKRWTRLIHGLRIRQRLQKQYATDPER 742          
BLAST of NO17G02490 vs. NCBI_GenBank
Match: KDR82961.1 (hypothetical protein GALMADRAFT_238668 [Galerina marginata CBS 339.88])

HSP 1 Score: 171.8 bits (434), Expect = 6.300e-39
Identity = 130/444 (29.28%), Postives = 202/444 (45.50%), Query Frame = 0
Query:  140 ASVLPQSLPP---SIPSSKGNDRWVALDVLRGRLD-----DPCSHERSLLSSRPSSLLP--------------SSSTSQWLYVLGVDNEGWLTDVTRRYSTRW-SRALRFRAGE--------------WWAGYLEQANSALAHRREARLLEKGDFRSFFEFETARDLERDELNEAETKEPMPTTWAGFEKHQKYVLERHLKRWEVIGVEDGEEGGKKGRRKVLGMFKGECVYDRRKVQEGATVRQWLQKHGRQVREGEKPCRIVESKSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPDALELYGFWQTERYQPPALLPNGRIPVNEHGNIEVWNHNPVFLPKGTAHVWGEGGGEWAVAQKLGVRYARAVVGWEVRQGRTLPVVEGVVVRKEDEGVLRDGLRAWQVGKEEKAAKAKEKRVVERWARFVKGLRIARDLQKKY 547
            AS  P + PP   +   S+ + RW+ +D +RG ++     DP     S+ +  PSSL P              +   ++ +YV+  + +G+  DVTRRY+  + ++  + + G               WW   ++         R+                   DLE  EL  A+  E MPTT  GF+ H  Y L RHLK+ E I                LG F+GE VY R  +    T   W++  GR V++GE+P ++V+ ++                                     LY F QTE Y P  ++ NG++P N  GNI++  + P  LPKG  H+  +G  +  +A+KLG  YA AV G+E ++ R  P+VEGVVV  ++E  + +     +   EEKA   +E+RV+++W R V+GLRI + LQ+KY
Sbjct:  269 ASPDPLTTPPVYWTEVFSRPDSRWLPVDPIRGIVNKRKSFDPTPSTSSVNTPTPSSLFPPYTPAPQINRRIPNTRVENRMVYVIAFEEDGYARDVTRRYAKEFGAKVAKVQGGSSAPNMAGGGKGRQAWWEKVVKSIERPYRLNRD-------------------DLEDQELQAAQLMEGMPTTMTGFKDHPLYALARHLKQTETI-------HPPPPATPELGKFRGEPVYPRSSIVSLKTAENWMRNLGRSVKQGEQPMKMVKLRAGTVNRMRELEVLKDELTVAGRDEPNGEGSSTAEIMQGLYAFSQTEPYVPEPVI-NGKVPKNNFGNIDL--YVPSMLPKGAVHIPFKGVAK--IARKLGFDYAEAVTGFEFKKRRAFPIVEGVVVAAQNEATILEAYWEAERETEEKARIKREERVLKQWTRLVQGLRIRQRLQEKY 681          
BLAST of NO17G02490 vs. NCBI_GenBank
Match: KIO32977.1 (hypothetical protein M407DRAFT_18133 [Tulasnella calospora MUT 4182])

HSP 1 Score: 169.9 bits (429), Expect = 2.400e-38
Identity = 117/403 (29.03%), Postives = 191/403 (47.39%), Query Frame = 0
Query:  154 SKGNDRWVALDVLRGRLDDPCSHERSLLSSRPSSLLPSSSTSQWLYVLGVDNEGWLTDVTRRYSTRW-SRALRFR-----AGEWWAGYLEQANSALAHRREARLLEKGDFRSFFEFETARDLERDELNEAETKEPMPTTWAGFEKHQKYVLERHLKRWEVIGVEDGEEGGKKGRRKVLGMFKGECVYDRRKVQEGATVRQWLQKHGRQVREGEKPCRIVESKSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPDALELYGFWQTERYQPPALLPNGRIPVNEHGNIEVWNHNPVFLPKGTAHVWGEGGGEWAVAQKLGVRYARAVVGWEVRQGRTLPVVEGVVVRKEDEGVLRDGLRAWQVGKEEKAAKAKEKRVVERWARFVKGLRIARDLQKKYGEGG 551
            S+ + RW+ +D  R  +       R  L   P    P+   ++ LYV+G + +G+  DVT RY+  + ++  + R      G WW G L          R+                   D E  E   ++  E MP + +GF+ H  YVLERHL+R +V+                +G F+GE VY R  V E  T   W++  GR+V+ GE+P ++V+ ++                                     LY  WQT+ Y+PP ++ +G++P N+ GNI++  + P  LP+G  H+  +G  +  +A+KLG+ +A AV G+E +Q R LP++ G+VV +E+   L +     +   EEK  + K++RV +RW + V+GLRI + L K+Y   G
Sbjct:  388 SRPDGRWIPVDPSRNLV------SRKKLFEPP----PNDRNNRMLYVVGFEEDGYARDVTLRYANEFGAKTAKLRIGGTGKGSWWDGILPMITRPYRLNRD-------------------DTEDAEFISSQMTEAMPNSMSGFKNHPLYVLERHLRREQVV-----------HPAITIGTFRGEPVYPRGNVVELKTAENWMRSQGREVKNGEQPMKMVKIRASTVRRKREVEVAMMEKADRGGGSGDENGVMQG-----LYAEWQTKFYEPPPVI-DGKVPKNDFGNIDL--YTPSMLPQGAIHLPYKGIAK--IARKLGIDHAEAVTGFEFKQRRALPILTGIVVAEEESEALLEAYWTSEHAAEEKERQKKQERVFKRWQKLVRGLRIRQRLLKEYSVNG 740          
BLAST of NO17G02490 vs. NCBI_GenBank
Match: OAQ31756.1 (Rad4-domain-containing protein [Mortierella elongata AG-77])

HSP 1 Score: 168.7 bits (426), Expect = 5.300e-38
Identity = 120/402 (29.85%), Postives = 198/402 (49.25%), Query Frame = 0
Query:  157 NDRWVALDVLRGRLDDPCSHERSLLSSRPSSLLPSSSTSQWLYVLGVDNEGWLTDVTRRYSTRW---SRALRFR----AG-EWWAGYLEQANSALAHRREARLLEKGDFRSFFEFETARDLERDELNEAETKEPMPTTWAGFEKHQKYVLERHLKRWEVIGVEDGEEGGKKGRRKVLGMFKGECVYDRRKVQEGATVRQWLQKHGRQVREGEK-PCRIVESK-SXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPDALELYGFWQTERYQPPALLPNGRIPVNEHGNIEVWNHNPVFLPKGTAHVWGEGGGEWAVAQKLGVRYARAVVGWEVRQGRTLPVVEGVVVRKEDEGVLRDGLRAWQVGKEEKAAKAKEKRVVERWARFVKGLRIARDLQKKYGE 549
            N +W+ +D +RG ++ P       L   P++   S +T+   YV+  D + ++TDVTRRY+++W   ++ LR +    AG +WWA    Q  + L +   +                  D+E  EL +AE  E MPT    F  H  Y LERHLK++EV+            +  VLG  +GE +Y R  V++  +   WL K  RQ++ GE  P + ++S+ +                                 D + L+G WQTE YQPP ++ +GR+P N++G  +V+   P  +P G  H+ G G G   VA++LGV +  AV G+E +  R++P+++G++V  E   ++ D  R      +++A K K   V+ RW + +KG+ +   L ++YGE
Sbjct:  392 NQKWITIDPVRGVVNCP-------LKMHPAA---SCTTNNLAYVVAYDEDNYVTDVTRRYTSQWTTVTKKLRVQPAGPAGFDWWA----QTMAVLTNPSPS---------------VEEDIEEAELQQAEASERMPTKLGDFNNHPIYALERHLKKFEVL----------HPKLPVLGHIRGEAIYPRSCVKQVRSKENWL-KRARQIKSGEVIPIKWIKSRPATIFQMRLQQQAALAGGNKMETDDDQGEASGENGDQVALFGEWQTEPYQPPWVV-DGRVPRNDYGRQDVF--TPDMVPIGGTHLKGRGIGR--VARQLGVDFVEAVTGFEFQSRRSVPIIQGIIVPTESAELVMDAYREVTHHADQEALKKKRAEVLRRWRKLIKGVVLRSRLMEEYGE 748          
BLAST of NO17G02490 vs. NCBI_GenBank
Match: SJL07798.1 (uncharacterized protein ARMOST_11150 [Armillaria ostoyae])

HSP 1 Score: 168.7 bits (426), Expect = 5.300e-38
Identity = 128/422 (30.33%), Postives = 201/422 (47.63%), Query Frame = 0
Query:  144 PQSLPPSIPS---SKGNDRWVALDVLRGRLDDPCSHERSLLSSRPSSLLPSSSTSQWLYVLGVDNEGWLTDVTRRYSTRW-SRALRFRAG-----------EWWAGYLEQANSALAHRREARLLEKGDFRSFFEFETARDLERDELNEAETKEPMPTTWAGFEKHQKYVLERHLKRWEVIGVEDGEEGGKKGRRKVLGMFKGECVYDRRKVQEGATVRQWLQKHGRQVREGEKPCRIVESKSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPDALELYGFWQTERYQPPALLPNGRIPVNEHGNIEVWNHNPVFLPKGTAHVWGEGGGEWAVAQKLGVRYARAVVGWEVRQGRTLPVVEGVVVRKEDEGVLRDGLRAWQVGKEEKAAKAKEKRVVERWARFVKGLRIARDLQKKYGEGG 551
            P S PP   +   S+ + RW+ +D LR  +     ++R++    P+ +   S  ++ +YVL ++ +G+  DVTR+Y+ ++ ++  + + G            WW   +          R+                   D+E  EL  A+ +E MPTT AGF+ H  YVL RHLK+ E I     +          +G F+GE VY R  V    T   WL+  GR VREG +P ++V+S+                                      LY   QTE Y P  ++ +G++P N+ GNI++  + P  LP+G  HV  +G  +  +A+KLG+ YA AV G+E ++ R  PV+EGVVV  E+E VL D     +   +EKA   +E++ ++RW R + GLRI + LQK+Y   G
Sbjct:  331 PTSTPPVFWTEVFSRPDGRWIPIDPLRAIV-----NKRNVFD--PTGI---SQQNRLVYVLAIEEDGYARDVTRKYARQYGAKVAKVQGGAVTGGGGKGREAWWERVVSTVTRPYRLNRD-------------------DVEDAELESAQIREGMPTTIAGFKDHPVYVLTRHLKQTEAIHPPPPD-------TPEMGKFRGEPVYPRSSVVSLKTAENWLRSEGRSVREGVQPMKMVKSRPGTIGRMRELEILKDSLREAGETADDQAQVMHG-----LYARSQTELYVPKPVV-DGKVPKNDFGNIDL--YVPTMLPRGAVHVPFKGVQK--LAKKLGLDYAEAVTGFEFKKRRAFPVLEGVVVTAENEQVLLDAYWESEQDAQEKARVKREEKAIKRWTRLIHGLRIRQRLQKQYAGRG 706          
BLAST of NO17G02490 vs. NCBI_GenBank
Match: PPQ71040.1 (hypothetical protein CVT24_011921 [Panaeolus cyanescens])

HSP 1 Score: 168.7 bits (426), Expect = 5.300e-38
Identity = 143/432 (33.10%), Postives = 206/432 (47.69%), Query Frame = 0
Query:  154 SKGNDRWVALDVLR-----GRLDDP-----CSHERSLLSSRPS----------SLLPSSSTSQWLYVLGVDNEGWLTDVTRRYSTRWSRALRFRAG----------EWWAGYLEQANSALAHRREARLLEKGDFRSFFEFETARDLERDELNEAETKEPMPTTWAGFEKHQKYVLERHLKRWEVIGVEDGEEGGKKGRRKVLGMFKGECVYDRRKVQEGATVRQWLQKHGRQVREGEKPCRIVESKSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPDALE----LYGFWQTERYQPPALLPNGRIPVNEHGNIEVWNHNPVFLPKGTAHVWGEGGGEWAVAQKLGVRYARAVVGWEVRQGRTLPVVEGVVVRKEDEGVLRDGLRAWQVGKE--EKAAKAKEKRVVERWARFVKGLRIARDLQKKYGEG 550
            SK + +W+ +D +R      ++ DP      SH+ +  SS  S           +  S   +Q LYVL  + +G+  DVTRRY+ ++S  +    G           WW   +          R+                   DLE  EL  A+  E MPTT  GF+ H  YVLERHLK+ E I   D          + +  FKGE VY R  +    T   WL+  GR ++ GE+P ++V+ ++                       XXXXXXXXX    E    LY F QT  Y P  ++ +GR+P N  GNI++  + P  LP+G  H+  +G  +  VA+KLG  +A AV G+E ++ R  PV+EG+VV  E E V+ +    W+  +E  EKA   KE+RV+++W R ++GLRI   LQKKYG G
Sbjct:  347 SKTDAKWLPVDPIRCYVNKSKVFDPVQVPGVSHKATFGSSGLSHPHAAVGPVERVKASRLPNQLLYVLAFEEDGYARDVTRRYARQFSAKVAKAQGASGGRGNAHQNWWMSVVSCVTRPYRLNRD-------------------DLEDQELEAAQMSEGMPTTMTGFKDHAIYVLERHLKQTESIYPPDS---------RPVARFKGEPVYLRSSIVGLKTSENWLRSEGRMIKPGEQPMKMVKLRAGTINKMREVEALKDELKVAGEGNXXXXXXXXXVAVGEVMQGLYAFSQTTPYVPAPVI-DGRVPKNNFGNIDL--YVPSMLPQGAVHIPYKGVVK--VARKLGFDFAEAVTGFEFKKRRAFPVIEGIVVAAEHEAVILEAY--WETEREAAEKAKTQKEERVIKQWTRLIQGLRIRDRLQKKYGTG 743          
BLAST of NO17G02490 vs. NCBI_GenBank
Match: KIJ17554.1 (hypothetical protein PAXINDRAFT_175417 [Paxillus involutus ATCC 200175])

HSP 1 Score: 168.3 bits (425), Expect = 7.000e-38
Identity = 130/417 (31.18%), Postives = 200/417 (47.96%), Query Frame = 0
Query:  144 PQSLPPSIPS---SKGNDRWVALDVLRGRLDDPCSHERSLLSSRPSSLLPSSSTSQWLYVLGVDNEGWLTDVTRR----YSTRWSRALRFRAG------EWWAGYLEQANSALAHRREARLLEKGDFRSFFEFETARDLERDELNEAETKEPMPTTWAGFEKHQKYVLERHLKRWEVIGVEDGEEGGKKGRRKVLGMFKGECVYDRRKVQEGATVRQWLQKHGRQVREGEKPCRIVESKSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPDALE-LYGFWQTERYQPPALLPNGRIPVNEHGNIEVWNHNPVFLPKGTAHVWGEGGGEWAVAQKLGVRYARAVVGWEVRQGRTLPVVEGVVVRKEDEGVLRDGLRAWQVGKEEKAAKAKEKRVVERWARFVKGLRIARDLQKKY 547
            P + PP   +   S+ + RW+ +D +RG ++     + S +    SS       ++ LYV+G++ +G+  D+T R    Y+ + S+     AG      EWW+  +E        +R+                   DLE +EL+  +  E MPTT AGF+ H  Y L RHL+R +VI                LG F+GE VY R  V    T   W+ + GR +R+G +P ++V+ ++                                 D ++ LY   QTE Y+P   + NG+IP N+ GNI++  + P  LP+G  H+  +G  +  VA+KLG  YA AV G+E ++ R  PV+EG+VV  E+E V+ D     +   EEKA   + +RV +RW R V+GLRI   LQK+Y
Sbjct:  347 PTTTPPVFWTEVFSRADSRWLPVDPIRGIVNKRHLFDPS-IPPIGSSKTTVQQDNRMLYVIGLEEDGFGRDITARYARDYTAKVSKVQGVGAGPAGKRKEWWSRVVEMITRPYRLQRD-------------------DLEDEELHNHQLTEGMPTTIAGFKDHPLYALTRHLRRDQVIDPP-----------TELGKFRGEPVYPRSSVISLKTAENWM-RQGRVIRQGAQPMKMVKQRA-------ATVSRQREMELALERANVDGHAGPDEDVMQGLYARSQTELYKPEP-IQNGKIPKNDFGNIDL--YVPSMLPEGAVHIPFKGAAK--VAKKLGFDYAEAVTGFEFKKRRAFPVIEGIVVAAENENVIVDACLEAEQDAEEKARAKRLERVCKRWIRLVQGLRIRDRLQKQY 719          
BLAST of NO17G02490 vs. NCBI_GenBank
Match: ORX95525.1 (Rad4-domain-containing protein [Basidiobolus meristosporus CBS 931.73])

HSP 1 Score: 167.2 bits (422), Expect = 1.600e-37
Identity = 124/399 (31.08%), Postives = 196/399 (49.12%), Query Frame = 0
Query:  157 NDRWVALDVLRGRLDDPCSHERSLLSSRPSSLLPSSSTSQWL-YVLGVDNEGWLTDVTRRYSTRW---SRALRFRAG----EWWAGYLEQANSALAHRREARLLEKGDFRSFFEFETARDLERDELNEAETKEPMPTTWAGFEKHQKYVLERHLKRWEVIGVEDGEEGGKKGRRKVLGMFKGECVYDRRKVQEGATVRQWLQKHGRQVREGEKPCRIVESKSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPDALELYGFWQTERYQPPALLPNGRIPVNEHGNIEVWNHNPVFLPKGTAHVWGEGGGEWAVAQKLGVRYARAVVGWEVRQGRTLPVVEGVVVRKEDEGVLRDGLRAWQVGKEEKAAKAKEKRVVERWARFVKGLRIARDLQKKYG 548
            N++WV++D +RG            L S+ + + PS+     L YV+  + +G + DVTRRY+ +W   ++ LR        +WW   L    S  A R +++               A +LE  EL   E  E MPT+ A F  H  YVLERHLK++EV+  +            V+G  +GE +Y R  V+E  T   WL K GR V+ GE+P + V+++                                 P +  LYG WQTE Y+PP ++ +G+IP N+ GNI+++  +   LP+G  H+  +G     +A+KL V YA AVVG+E    R +PVV+G+VV  E + ++ +    ++  ++EK     E   + +W + + GLRI   L+++YG
Sbjct:  574 NNKWVSVDCVRG------------LVSKVAEMEPSADNPYSLAYVVAYEADGCIKDVTRRYTRQWGAKTKKLRVPVAKDGYDWWGETL----SFYARRYKSQ---------------ADELEDAELLSCEVSEAMPTSIAAFNNHPLYVLERHLKKFEVLHPQG----------PVIGHIRGEPIYPRSCVKETHTTETWL-KEGRTVKPGEEPVKYVKAR-----------VVTINKQRMHNMMAMDSGEAVDPQS-ALYGIWQTEEYRPPPVV-DGKIPKNKFGNIDLYKDS--MLPEGAVHLPFKGIAR--IAKKLEVDYAEAVVGFEFHCRRCIPVVKGIVVPVESKEIIMEAYEEFERNRQEKEFTKLEMAALAKWRKLITGLRIHHRLKEEYG 913          
The following BLAST results are available for this feature:
BLAST of NO17G02490 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
KNZ73151.18.000e-4231.50DNA repair protein rhp41 [Termitomyces sp. J132][more]
GAT55865.13.000e-4131.48predicted protein [Mycena chlorophos][more]
EGN98589.14.800e-3932.08hypothetical protein SERLA73DRAFT_92039 [Serpula l... [more]
KDR82961.16.300e-3929.28hypothetical protein GALMADRAFT_238668 [Galerina m... [more]
KIO32977.12.400e-3829.03hypothetical protein M407DRAFT_18133 [Tulasnella c... [more]
OAQ31756.15.300e-3829.85Rad4-domain-containing protein [Mortierella elonga... [more]
SJL07798.15.300e-3830.33uncharacterized protein ARMOST_11150 [Armillaria o... [more]
PPQ71040.15.300e-3833.10hypothetical protein CVT24_011921 [Panaeolus cyane... [more]
KIJ17554.17.000e-3831.18hypothetical protein PAXINDRAFT_175417 [Paxillus i... [more]
ORX95525.11.600e-3731.08Rad4-domain-containing protein [Basidiobolus meris... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL160nonsL160Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR053ncniR053Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR029ngnoR029Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR028ngnoR028Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO17G02490.1NO17G02490.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|533292gene_9318Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO17G02490.1NO17G02490.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO17G02490 ID=NO17G02490|Name=NO17G02490|organism=Nannochloropsis oceanica|type=gene|length=1746bp
ATGCCGGGATGTGGAGTGTGGGCGGAGGTGTTCGTGAAGGGAAAAGAAAA
GGGTAGAGGGAGGGAGGGAAGGAAGGAGGAGGAGATGGTTGAGGTGGGTT
GCTCGGACGACGGGGAAGAGAAGGAGGACGAGAAGGAAGGGGAGGAGGAT
GGAGAGTCGACAGAGAGCGAGAATGAAGGGAAGGGTAGACAGGGAAATGG
CAAGAGAAAGGCGACAAAAACAGAGGAAAAGGATTGCGCCAGCAGCAACA
GCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAAGGAAAAAAGAAGGAAG
CTCTCCACCGAGCTATTTTCCCCCTCCTCTTCCTCCTCCTCTTCCTCTCT
CTCTGTCTCCACCTCCACCACCATTACCAAAACCACTGCCAACCATAGCA
ACAACCACGACCAAGCAGCCTCCGTTCTCCCTCAGTCCCTTCCTCCGTCC
ATCCCTTCTTCCAAAGGCAATGATCGCTGGGTAGCCCTCGACGTTCTCCG
AGGCCGACTCGACGACCCCTGCTCCCACGAACGTTCCCTCCTCTCCTCCC
GCCCTTCTTCCCTCCTGCCCTCCTCCTCCACCTCGCAATGGCTCTACGTC
CTGGGAGTGGACAATGAAGGGTGGTTGACGGACGTGACACGCAGGTACAG
CACGCGATGGTCGCGCGCACTCCGATTCCGAGCCGGGGAGTGGTGGGCAG
GCTATTTGGAACAAGCAAACTCGGCACTGGCGCACCGAAGGGAAGCGAGG
TTACTGGAGAAGGGGGACTTTCGATCGTTTTTTGAATTTGAAACGGCTCG
GGATTTAGAGAGGGATGAGTTGAATGAGGCGGAGACTAAGGAGCCAATGC
CAACTACATGGGCAGGATTCGAGAAACATCAGAAATATGTGTTGGAGAGG
CATTTGAAACGCTGGGAGGTGATTGGGGTGGAGGACGGGGAGGAAGGCGG
AAAGAAGGGGAGGAGGAAAGTGTTAGGGATGTTCAAGGGCGAATGTGTGT
ATGATAGGAGGAAGGTACAGGAGGGGGCGACAGTACGACAGTGGCTCCAA
AAGCATGGAAGGCAGGTGAGGGAGGGGGAGAAGCCGTGCAGAATCGTGGA
GAGCAAGAGTAAGAGCGATAAGAAGAAGAAAAAGAAGACGGGCAACCCGG
GGCAGGAAGAAGAGGAAGAAGACGGCAAGGAGGAGGGAGGAAAGGAGGGC
GGGAAGCCCGACGCACTGGAACTGTACGGATTTTGGCAAACGGAACGGTA
CCAGCCCCCGGCGCTCTTGCCCAATGGGAGGATCCCTGTGAATGAACACG
GTAATATAGAAGTCTGGAATCATAATCCCGTTTTCTTGCCAAAGGGGACG
GCGCACGTGTGGGGGGAGGGAGGAGGGGAGTGGGCCGTGGCTCAAAAGTT
GGGAGTGAGGTATGCACGGGCGGTGGTGGGGTGGGAGGTACGGCAAGGGC
GAACGTTGCCTGTAGTGGAGGGTGTCGTGGTTCGGAAGGAAGACGAGGGG
GTTCTACGGGATGGGTTGAGAGCTTGGCAGGTGGGGAAGGAGGAGAAGGC
GGCCAAGGCGAAGGAGAAGAGGGTGGTGGAGAGGTGGGCTCGATTTGTGA
AGGGTTTGCGGATTGCACGAGACTTGCAGAAGAAGTACGGGGAGGGGGGA
AGAAGGGGAGGAGGAGATACTGGCAGTGGGAACAGTGAGGGTGTAGGAGG
AGGGGGAGGATGGGGACGAATGGACAAGAAGGAAATGCCAAAATAG
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protein sequence of NO17G02490.1

>NO17G02490.1-protein ID=NO17G02490.1-protein|Name=NO17G02490.1|organism=Nannochloropsis oceanica|type=polypeptide|length=582bp
MPGCGVWAEVFVKGKEKGRGREGRKEEEMVEVGCSDDGEEKEDEKEGEED
GESTESENEGKGRQGNGKRKATKTEEKDCASSNSSSSSSSSSSSKEKRRK
LSTELFSPSSSSSSSSLSVSTSTTITKTTANHSNNHDQAASVLPQSLPPS
IPSSKGNDRWVALDVLRGRLDDPCSHERSLLSSRPSSLLPSSSTSQWLYV
LGVDNEGWLTDVTRRYSTRWSRALRFRAGEWWAGYLEQANSALAHRREAR
LLEKGDFRSFFEFETARDLERDELNEAETKEPMPTTWAGFEKHQKYVLER
HLKRWEVIGVEDGEEGGKKGRRKVLGMFKGECVYDRRKVQEGATVRQWLQ
KHGRQVREGEKPCRIVESKSKSDKKKKKKTGNPGQEEEEEDGKEEGGKEG
GKPDALELYGFWQTERYQPPALLPNGRIPVNEHGNIEVWNHNPVFLPKGT
AHVWGEGGGEWAVAQKLGVRYARAVVGWEVRQGRTLPVVEGVVVRKEDEG
VLRDGLRAWQVGKEEKAAKAKEKRVVERWARFVKGLRIARDLQKKYGEGG
RRGGGDTGSGNSEGVGGGGGWGRMDKKEMPK*
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Synonyms
Publications