NO17G02370, NO17G02370 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO17G02370 vs. NCBI_GenBank
Match: XP_005854557.1 (nmra-like family domain-containing 1-like protein [Nannochloropsis gaditana CCMP526] >EKU21804.1 nmra-like family domain-containing 1-like protein [Nannochloropsis gaditana CCMP526] >EWM22381.1 nmra-like family domain-containing protein 1 [Nannochloropsis gaditana]) HSP 1 Score: 375.6 bits (963), Expect = 1.400e-100 Identity = 183/255 (71.76%), Postives = 219/255 (85.88%), Query Frame = 0 Query: 20 LPLALVVGGTGLQGAGCLQDLRSSGRFRMRTITRNARSKPAVALAAQGVELYQGTLLDRPFLDKAMAGVDVLFLATFSDHDGTELRQGKNLGNAAVAAGVQRVVFSGGERIGVDTMDNKIKIEEYLRTLPLPHVVYLHTAFFFENVATKRGTKRVRVTRDPRQGHITQYTFSIPLLQDMRIPFISPTDIGRVAATVLLAPITQFPSGSILPIAGDVLSPREFVSAVARLTGAKATYTQLSLDFFRRLPIPGAELM 275 LPLAL++GGTGLQG+GC+QDL S R R+RT +RNARSK A+AL A GVELY+G+LLDRPF+ +AMAGV LFL TFSDHDG+E++QGKNLG+AA+AAGV+RVVFSGGERIGV MDNK +IEEYLRTL H+VYLHTAFF+EN+ TKRGTKRVR+ R+P G I++Y FSIPLL+DM IPFISP DIGRVAATVLLAP + PS +LPIAGDVLSP++FV VA LTG +++YTQL LDFF+RLPIPG+EL+ Sbjct: 17 LPLALIIGGTGLQGSGCIQDLIVSNRLRLRTTSRNARSKAALALTAHGVELYEGSLLDRPFVGRAMAGVHSLFLVTFSDHDGSEVQQGKNLGDAAIAAGVKRVVFSGGERIGVYAMDNKFQIEEYLRTLNFSHIVYLHTAFFYENIVTKRGTKRVRIERNPSSGRISRYFFSIPLLEDMAIPFISPKDIGRVAATVLLAPHSDIPSEIVLPIAGDVLSPKQFVEKVANLTGVESSYTQLPLDFFQRLPIPGSELI 271
BLAST of NO17G02370 vs. NCBI_GenBank
Match: CEM35089.1 (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 199.1 bits (505), Expect = 1.800e-47 Identity = 119/278 (42.81%), Postives = 159/278 (57.19%), Query Frame = 0 Query: 25 VVGGTGLQGAGCLQDLRSSGRFRMRTITRNARSKPAVALAAQGVELYQGTLLDRPFLDKAMAGVDVLFLATFSDHDGTELRQGKNLGNAAVAAGVQRVVFSGGERIGVDTMDNKIKIEEYLRTL------------PLPHVVYLHTAFFFENVATKRGTKRVRVTRDPRQGHITQYTFSIPLLQDMRIPFISPTDIGRVAATVLLAPITQ--------FPSGSILPIAGDVLSPREFVSAVARLTGAKAT--------YTQLSLDFFRRLPIPGAELM 275 V GGTG QG G + L +RT+TRNA+S A+ L ++GVE+ +G L D + +A++G + F +T+SDHDGTE + G+NL A + V VVFSGGERI V+ MDNK +IE+ + + P +V+LH+AFF ENV KRGTKRV+V D R Y FS+PL Q MR+P I DIG+VAA +L P FPS + IAGD ++P++FV RL + Y + SL FFR LPIPGA L+ Sbjct: 19 VCGGTGSQGGGAISLLLRHKNTVVRTLTRNAKSNAALQLMSRGVEVIEGDLKDEKPVCEALSGCEGCFASTYSDHDGTEGQCGRNLCAAIIKNQVSLVVFSGGERINVEGMDNKAEIEDLWKRMIAEARKEKGKGWVQPRIVFLHSAFFMENVVAKRGTKRVKVDHDRR-----HYEFSVPLKQHMRVPMIGGDDIGKVAAAILADPERSLHDTDKIPFPSMWEIKIAGDAVTPQQFVDTFLRLKNRNRSEQDKVTGEYREFSLQFFRSLPIPGARLI 291
BLAST of NO17G02370 vs. NCBI_GenBank
Match: WP_052186046.1 (NmrA/HSCARG family protein [Chryseobacterium sp. YR460]) HSP 1 Score: 118.2 bits (295), Expect = 4.100e-23 Identity = 84/249 (33.73%), Postives = 120/249 (48.19%), Query Frame = 0 Query: 21 PLALVVGGTGLQGAGCLQDLRSSGRFRMRTITRNARSKPAVALAAQGVELYQGTL---LDRPFLDKAMAGVDVLFLATFSD-HDGTELRQGKNLGNAAVAAGVQRVVFSGGERIGVDT--------MDNKIKIEEYLRTLPLPHVVYLHTAFFFENVATKRGTKRVRVTRDPRQGHITQYTFSIPLLQDMRIPFISP-TDIGRVAATVLLAPITQFPSGSILPIAGDVLSPREFVSAVARLTGAKATYT 257 PL + G G QG L SGR+R+R ITR S A+ LA QG EL L + F++ V F+ +D + E G+ L +AAV AGV++++FS E + T +K +IE+Y+RTLPL +++ AFF+ N+ K + T F I L Q R PF+ P T G +L P F +G LP+ GD++SP+E V R+TG KA Y+ Sbjct: 17 PLVTIAGVLGKQGRSVASTLLESGRYRVRGITRRTDSPAAITLAKQGAELINLPLHMGYKKEFIEAFRGSESVFFMTPNTDPNQSQEFELGRELADAAVEAGVRQIIFSSLENVEEITKGKKFAPHFTDKARIEQYIRTLPLTS-SFIYMAFFYTNLLEFYNPKIINDT----------LVFPIYLPQHFRAPFVDPLTATGPAVLEILSHP--DFYAGKSLPVIGDIISPQEMVDTFERVTGKKAVYS 252
BLAST of NO17G02370 vs. NCBI_GenBank
Match: WP_090525849.1 (NmrA/HSCARG family protein [Mucilaginibacter sp. NFR10] >SCW48990.1 Nucleoside-diphosphate-sugar epimerase [Mucilaginibacter sp. NFR10]) HSP 1 Score: 117.5 bits (293), Expect = 7.000e-23 Identity = 93/263 (35.36%), Postives = 129/263 (49.05%), Query Frame = 0 Query: 19 LLPLALVVGGTGLQGAGCLQDLRSSGRFRMRTITRNARSKPAVALAAQGVELYQGTL--LDRPFLDKAMAGVDVLFLAT--FSDHDGTELRQGKNLGNAAVAAGVQRVVFSGGERIGVDT--------MDNKIKIEEYLRTLPLPHVVYLHTAFFFENVATKRGTKRVRVTRDPRQGHITQYTFSIPLLQDMRIPFISPTDIGRVAATVLLAPITQFPSGSILPIAGDVLSPREFVSAVARLTGAKATYTQL--SLDFFRRLP 268 L PL + G G QG Q L SGR+R+R ITR S A++L QG EL L + +A G +F+ T + D E GK L +AAV AGVQ V+FS E + T +K +IE Y+RTLP+ +++ AFF+ N+ + T VR G + F I L +D R PF+ P A L + Q+ +G LP+ GD++SPRE V+ +R+TG KA Y+ DF R P Sbjct: 10 LKPLITITGILGKQGYSAAQTLLQSGRYRVRGITRRTDSPNAISLKEQGAELVNLPLDIGHQKAYTEAFRGSQGVFMMTPGIAPPDTHEFELGKQLADAAVEAGVQHVIFSSLENVDEITRGKKFAPHFTDKARIEAYIRTLPVTS-SFIYMAFFYTNL-LEFYTPLVR-----EDGTL---VFPIYLPEDFRAPFVDPLTATGPAVLELFSDQQQY-AGQSLPVIGDIISPREMVATFSRVTGKKAVYSSAYSREDFLRHFP 261
BLAST of NO17G02370 vs. NCBI_GenBank
Match: WP_091168822.1 (NmrA/HSCARG family protein [Mucilaginibacter gossypii] >SDH19489.1 Uncharacterized conserved protein YbjT, contains NAD(P)-binding and DUF2867 domains [Mucilaginibacter gossypii]) HSP 1 Score: 116.3 bits (290), Expect = 1.600e-22 Identity = 92/263 (34.98%), Postives = 128/263 (48.67%), Query Frame = 0 Query: 19 LLPLALVVGGTGLQGAGCLQDLRSSGRFRMRTITRNARSKPAVALAAQGVELYQGTL--LDRPFLDKAMAGVDVLFLAT--FSDHDGTELRQGKNLGNAAVAAGVQRVVFSGGERIGVDT--------MDNKIKIEEYLRTLPLPHVVYLHTAFFFENVATKRGTKRVRVTRDPRQGHITQYTFSIPLLQDMRIPFISPTDIGRVAATVLLAPITQFPSGSILPIAGDVLSPREFVSAVARLTGAKATYTQL--SLDFFRRLP 268 L PL + G G QG Q L SGR+R+R ITR S A++L QG EL L + +A G +F+ T + D E GK L +AAV AGVQ V+FS E + T +K ++E Y+RTLP+ +++ AFF+ N+ + T VR G + F I L +D R PF+ P A L + Q+ +G LP+ GD++SPRE V+ R+TG KA Y+ DF R P Sbjct: 10 LKPLITITGILGKQGYSAAQTLLKSGRYRVRGITRRTDSPNAISLKEQGAELVNLPLDVGHQKAYTEAFRGSHGVFMMTPGIAPPDTHEFELGKQLADAAVEAGVQHVIFSSLENVDEITRGKKFAPHFTDKARVEAYIRTLPITS-SFIYMAFFYTNL-LEFYTPLVR-----EDGTL---VFPIYLPEDFRAPFVDPLTATGPAVLELFSDQQQY-AGQSLPVIGDIISPREMVATFIRVTGKKAVYSSAYSREDFLRHFP 261
BLAST of NO17G02370 vs. NCBI_GenBank
Match: AKU93722.1 (hypothetical protein AKJ09_00386 [Labilithrix luteola]) HSP 1 Score: 115.9 bits (289), Expect = 2.000e-22 Identity = 89/247 (36.03%), Postives = 117/247 (47.37%), Query Frame = 0 Query: 21 PLALVVGGTGLQGAGCLQDLRSSGRFRMRTITRNARSKPAVALAAQGVELYQGTLL--DRPFLDKAMAGVDVLFLAT--FSDHDGTELRQGKNLGNAAVAAGVQRVVFSGGERIGVDT--------MDNKIKIEEYLRTLPLPHVVYLHTAFFFENVATKRGTKRVRVTRDPRQGHITQYTFSIPLLQDMRIPFISPTDIGRVAATVLLAPITQFPSGSILPIAGDVLSPREFVSAVARLTGAKATY 256 PL +VG T QG Q L SGR+R+RT+TRN S A +LAAQG E+ L L +A G + FL T + E GK L +AAV AGV VVFS E + T +K ++EEY+R LP+ ++ AFF+ N+ + P + F I L D R PF+ P A +L+ Q+ +G LPI GD LSP E V R+TG KA Y Sbjct: 7 PLVTIVGATSKQGRSVAQTLLGSGRYRVRTLTRNPNSPEARSLAAQGAEVLAVPLEVGRTQELVRAFRGAEAAFLLTPPIAPPATHEFALGKQLADAAVEAGVGHVVFSSLENVDAITSGKKFAPHFTDKARVEEYIRGLPIKS-TFVQLAFFYTNL----------LEFYPPRMDGEALVFPIYLPGDFRAPFVDPRTATGPAVLEILSHPAQY-AGQSLPIVGDFLSPNEMVETFQRVTGRKAAY 241
BLAST of NO17G02370 vs. NCBI_GenBank
Match: WP_069382595.1 (NmrA/HSCARG family protein [Pedobacter steynii] >AOM80941.1 NmrA family protein [Pedobacter steynii]) HSP 1 Score: 112.8 bits (281), Expect = 1.700e-21 Identity = 88/250 (35.20%), Postives = 127/250 (50.80%), Query Frame = 0 Query: 21 PLALVVGGTGLQGAGCLQDLRSSGRFRMRTITRNARSKPAVALAAQGVELYQGTL---LDRPFLDKAMAGVDVLFLAT--FSDHDGTELRQGKNLGNAAVAAGVQRVVFSGGERIGVDT--------MDNKIKIEEYLRTLPLPHVVYLHTAFFFENVATKRGTKRVRVTRDPRQGHITQYTFSIPLLQDMRIPFISP-TDIGRVAATVLLAPITQFPSGSILPIAGDVLSPREFVSAVARLTGAKATYT 257 PL +VG G QG+ + L SGR+R+R ITR S A++LA QGVEL L + F++ A G + +F+ T + + EL GK L +AAV AGVQ +VFS E + T +K +IEEY+RTLP+ +++ AFF+ N+ + +G F I L D R PF+ P T G + P + +G LP+ GD++SP+E V R+TG KA Y+ Sbjct: 7 PLITIVGILGKQGSSAARTLLKSGRYRVRGITRRIDSPEALSLAKQGVELRSVPLCLGYAKDFVE-AFRGSEGVFMMTPSIAPPETHELELGKQLADAAVEAGVQHLVFSSLENVDKITEGKKFAPHFTDKARIEEYIRTLPIKS-SFIYMAFFYTNL--------MEFYTPVIEG--DTLVFPIYLPSDFRAPFVDPLTATGPAVLEIFSNP--EKYAGKSLPVIGDMISPQEIVDTFVRVTGRKAKYS 242
BLAST of NO17G02370 vs. NCBI_GenBank
Match: WP_090496512.1 (NmrA/HSCARG family protein [Pedobacter terrae] >SDF79799.1 Uncharacterized conserved protein YbjT, contains NAD(P)-binding and DUF2867 domains [Pedobacter terrae]) HSP 1 Score: 112.8 bits (281), Expect = 1.700e-21 Identity = 85/248 (34.27%), Postives = 123/248 (49.60%), Query Frame = 0 Query: 21 PLALVVGGTGLQGAGCLQDLRSSGRFRMRTITRNARSKPAVALAAQGVELYQGTLLD--RPFLDKAMAGVDVLFLAT--FSDHDGTELRQGKNLGNAAVAAGVQRVVFSGGERIGVDT--------MDNKIKIEEYLRTLPLPHVVYLHTAFFFENVATKRGTKRVRVTRDPRQGHITQYTFSIPLLQDMRIPFISPTDIGRVAATVLLAPITQFPSGSILPIAGDVLSPREFVSAVARLTGAKATYT 257 PL ++VG G QG + L +SG +R+R ITR + A+ LA QGVEL L + +A G D +FL T + E GK L +AAV AGV++++FS E I T +K +IEEY+RTLP+ +++ AFFF N+ K T F I L +D PF+ P A +L+ Q+ +G LP+ GD++SP+E V ++TG KA Y+ Sbjct: 17 PLIVIVGILGKQGYSVARALLASGAYRIRGITRRLDAPEAIKLAEQGVELISLPLNPGYKKDFTQAFRGADSIFLMTPNIAPPANYEFDLGKELADAAVEAGVKQIIFSSLENIDKLTGGKLFAPHFTDKARIEEYIRTLPVKS-TFIYMAFFFTNLMEFYTPKLKGDT----------LIFPIYLPKDFAAPFVDPLTATGPAVLEILSNPDQY-AGKSLPVIGDIISPQEMVDTFTKVTGIKAAYS 252
BLAST of NO17G02370 vs. NCBI_GenBank
Match: WP_106636656.1 (NmrA/HSCARG family protein [Siphonobacter sp. BAB-5404] >PKK36849.1 NmrA family protein [Siphonobacter sp. BAB-5404]) HSP 1 Score: 112.8 bits (281), Expect = 1.700e-21 Identity = 90/249 (36.14%), Postives = 120/249 (48.19%), Query Frame = 0 Query: 21 PLALVVGGTGLQGAGCLQDLRSSGRFRMRTITRNARSKPAVALAAQGVELYQGTLLDRPFLDK---AMAGVDVLFLAT--FSDHDGTELRQGKNLGNAAVAAGVQRVVFS--------GGERIGVDTMDNKIKIEEYLRTLPLPHVVYLHTAFFFENVATKRGTKRVRVTRDPRQGHITQYTFSIPLLQDMRIPFISPTDIGRVAATVLLAPITQFPSGSILPIAGDVLSPREFVSAVARLTGAKATYT 257 PL VVG G QG L SGR+R+R ITR S A+ LA +GVEL LD + DK A G +FL T E GK L +AAV AGVQ +VFS G ++ +K ++E Y+RTLPL +++ AFFF N+ R+T D F I L +D R PF+ P A + + Q+ SG LP+ GD++SP E V ++TG KA Y+ Sbjct: 17 PLITVVGVLGKQGQSAAHALLESGRYRVRGITRRIHSPEALKLAEKGVELI-SLPLDLGYQDKFVQAFRGSAGVFLMTPNIVPPATHEFELGKQLADAAVEAGVQHIVFSSLENVDERSGGKLFAPHFTDKARVEAYIRTLPLTS-SFIYMAFFFTNLIE---FYTPRLTGD-------TLVFPIYLPKDFRAPFVDPLTATGPAVLEMFSNPDQY-SGKSLPVIGDLISPEELVETFTKVTGQKAEYS 252
BLAST of NO17G02370 vs. NCBI_GenBank
Match: WP_020808272.1 (NmrA/HSCARG family protein [Agrobacterium tumefaciens] >EPR23463.1 nitrogen metabolite repression regulator [Agrobacterium radiobacter DSM 30147] >KWT75465.1 NmrA family protein [Agrobacterium tumefaciens] >OOO33185.1 NmrA family protein [Agrobacterium tumefaciens]) HSP 1 Score: 112.1 bits (279), Expect = 2.900e-21 Identity = 85/247 (34.41%), Postives = 117/247 (47.37%), Query Frame = 0 Query: 21 PLALVVGGTGLQGAGCLQDLRSSGRFRMRTITRNARSKPAVALAAQGVELYQG--TLLDRPFLDKAMAGVDVLFLAT--FSDHDGTELRQGKNLGNAAVAAGVQRVVFSGGERIGVDT--------MDNKIKIEEYLRTLPLPHVVYLHTAFFFENVATKRGTKRVRVTRDPRQGHITQYTFSIPLLQDMRIPFISPTDIGRVAATVLLAPITQFPSGSILPIAGDVLSPREFVSAVARLTGAKATY 256 PL VVG T QG L S ++R+R +TRN S A +LA G E+ +L + L A G D +L T + D EL GK L +AAV AGV +VFS E + T +K + +Y+RTLP+ H ++ AFF+ N+ + QG +P +D R PF+ PT A +L+ F +G LPI GD++SPRE V R+TG KA Y Sbjct: 7 PLISVVGATSKQGRSVTMTLLKSNQYRVRALTRNPASAAARSLADLGAEIVVAPLSLGHQKELVTAFQGADGAYLMTPQLAPEDNAELALGKQLADAAVEAGVGHIVFSTLENVDKITAGKKFTPHFTDKALVADYIRTLPIAH-SFMSLAFFYTNL--------LEYYVPQMQGDTLLMPIYLP--EDFRAPFVDPTTATGPAVLSVLSDPDTF-NGKTLPIVGDIISPREMVETFQRVTGIKAEY 241 The following BLAST results are available for this feature:
BLAST of NO17G02370 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO17G02370 ID=NO17G02370|Name=NO17G02370|organism=Nannochloropsis oceanica|type=gene|length=1833bpback to top protein sequence of NO17G02370.2 >NO17G02370.2-protein ID=NO17G02370.2-protein|Name=NO17G02370.2|organism=Nannochloropsis oceanica|type=polypeptide|length=289bpback to top protein sequence of NO17G02370.1 >NO17G02370.1-protein ID=NO17G02370.1-protein|Name=NO17G02370.1|organism=Nannochloropsis oceanica|type=polypeptide|length=373bpback to top Synonyms
Publications
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