NO17G01320, NO17G01320 (gene) Nannochloropsis oceanica

Overview
NameNO17G01320
Unique NameNO17G01320
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3128
Alignment locationchr17:407900..411027 +

Link to JBrowse

Properties
Property NameValue
DescriptionMajor facilitator superfamily mfs_1
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr17genomechr17:407900..411027 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
GO:0006810transport
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO:0016020membrane
Vocabulary: Molecular Function
TermDefinition
GO:0005215transporter activity
GO:0005215transporter activity
Vocabulary: INTERPRO
TermDefinition
IPR036259MFS_trans_sf
IPR020846MFS_dom
IPR011701MFS
IPR001958Tet-R_TetA/multi-R_MdtG
Homology
BLAST of NO17G01320 vs. NCBI_GenBank
Match: EWM24258.1 (major facilitator superfamily mfs_1 [Nannochloropsis gaditana])

HSP 1 Score: 936.4 bits (2419), Expect = 5.000e-269
Identity = 522/694 (75.22%), Postives = 557/694 (80.26%), Query Frame = 0
Query:    1 MTDSLRQRPSRRREESVSPLVKHYLPESAAVKDKXXXXXXXXXXXXXXXXXXXXXXXXXXXDFPPLLMSPHRSHSDGGDVFHGHGGNTTPCNGGGMKRSRSFLDLINEKIEQEPSTNPDTVSLYLKFIVSLDFLAVATVVPLLPQYLVRTGCCNEQLAFISSAYSLAQLVGGVLLGWVSDGIMTRKTILMTSLLGSAASYGMIGVSSSRPLLILSRIVVGLVKQTMTMTTALISDLPLDRSRRTKHMSHLTAAVTVSWIVGPALGGYLFWLSPCLPPLVAAVIFTIAALLCLIGVPNHPDPPPPGFSPLSTSISSPDLLGMSNGNSGSGFKSKSKSFGTFLSTLRSNFREAFNDPTIIRIVGIRLLYSFTIISLMPTNFVGYLEARYGLKSHEVAYLHSYRATLSFLAQTFLVSAVVKHHTFSEEATARAAIVFGVFLKYSEVLNRDRLVFLFVTTPAIVGVFSLFDCSLQGIYTDSIPAGHRGAALGSMSALQSLVKVAAPLYGGEIFQRVGHERRPEIIFIHYVVLATVVWLVFPPGRHRPKQHEQRLPPSVSTGSLSQIVEGKEEGNALYGNDDMSSXXXXXXXXXXXXXXXXGLVRRNVSAHPLHGNPSTASLSDAVPVMRPAHEL-TTLTDEAIASAPATISSSSRGGNSSREPVAIRRGGMTSLPSSERLHPIRGRFDRGSRVRIGQI 694
            M  SLRQRPSRRREE VSPLV HY+ ESA+ KD                            D PPLL SP RSHSDGG+    + G T    GGGMKRSRSFLDLINEKIEQEPSTNPDTVSLYLKFIV+LDFLAVATVVPLLPQYL RTGCCNEQLAFISSAYSLAQLVGGVLLGWVSDGIMTRKTILMTSLLGSAA+YGM+G SSSRPLLILSRIVVGLVKQTMTMTTALISDLPLDRSRRTKHMSHLTAAVTVSWI+GPALGGYLFWLSP LPPLVAA IFT+AAL+CLIGVPNHPD  PPG+SPLSTSISSPDLLGM    +GS +K KSKS   FL TL++NFREAFNDPTIIRIV IRLLYSFTIISLMPTNF+GYLEARYGLKSHEVAYLHSYRATLSFLAQTFLVSAVV+HHTFSEEATAR AIV GVFLKYSEVLNRDRLVFLF+TTPAIV +FSLFDCSLQGIYTDSIPAGHRGAALGSMSALQSLVK+AAPLYGGEIFQRVGHERRPEIIF HY+VLATVVWLVFPPGRHRPK+    L PS S GSLSQIVEGKEEG++         XXX              L  +++S    + N S+ S+S++ P   PA          A+ SA  T   + +  N       IRRGGMTSLPSSERLHPIRGRFDRGSRVRIGQI
Sbjct:    1 MNASLRQRPSRRREEGVSPLVAHYVSESASCKD----TTSPSQSTVDRKNSNTFGKVDVIEDSPPLLRSP-RSHSDGGE----NVGGTAYLYGGGMKRSRSFLDLINEKIEQEPSTNPDTVSLYLKFIVALDFLAVATVVPLLPQYLARTGCCNEQLAFISSAYSLAQLVGGVLLGWVSDGIMTRKTILMTSLLGSAAAYGMVGASSSRPLLILSRIVVGLVKQTMTMTTALISDLPLDRSRRTKHMSHLTAAVTVSWILGPALGGYLFWLSPRLPPLVAAFIFTLAALVCLIGVPNHPDRGPPGYSPLSTSISSPDLLGMIGQGNGSQYKPKSKSLHAFLFTLKNNFREAFNDPTIIRIVSIRLLYSFTIISLMPTNFIGYLEARYGLKSHEVAYLHSYRATLSFLAQTFLVSAVVRHHTFSEEATARVAIVLGVFLKYSEVLNRDRLVFLFLTTPAIVAIFSLFDCSLQGIYTDSIPAGHRGAALGSMSALQSLVKIAAPLYGGEIFQRVGHERRPEIIFFHYIVLATVVWLVFPPGRHRPKR--PPLAPSASAGSLSQIVEGKEEGSSXXXXXXXXXXXXKRDSSTNDREGKH-LHAQDMSVPTPYANLSSVSVSESAPFRGPAAAAEKAAAAPAVPSAALTDMGNPQAKNREEGSGVIRRGGMTSLPSSERLHPIRGRFDRGSRVRIGQI 682          
BLAST of NO17G01320 vs. NCBI_GenBank
Match: CBN78693.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 206.1 bits (523), Expect = 3.600e-49
Identity = 154/489 (31.49%), Postives = 242/489 (49.49%), Query Frame = 0
Query:  110 IEQEPSTNPDTVSL-----YLKFIVSLDFLAVATVVPLLPQYLVRTGCCNEQLAFISSAYSLAQLVGGVLLGWVSDGIMTRKTILMTSLLGSAASYGMIGVSSSRPLLILSRIVVGLVKQTMTMTTALISDLPLDRSRRTKHMSHLTAAVTVSWIVGPALGGYLFWLSPCLPPLVAAVIFTIAALLCLIGVPNHPDPPPPGFS--------------------PLSTSISSPDLLGMSNGNSGSGFKSKSKSFGTFLSTLRSNFREAFNDPTIIRIVGIRLLYSFTIISLMPTNFVGYLEARYGLKSHEVAYLHSYRATLSFLAQTFLVSAVVKHHTFSEEATARAAIVFGVFLKYSEVLNRDRLVFLFVTTPAIVGVFSLFDCSLQGIYTDSIPAGHRGAALGSMSALQSLVKVAAPLYGGEIFQRVGHERRPEIIFIHYVVLATVVWLVFPPGRHRPKQHE--QRLPPSVSTGSLSQIVEGKEEGNA 572
            +  E S  P ++S       +K ++ +D L+V  VVPLL  Y        EQ   + SAYSL+Q+VGG++LG +SD  ++R+T+L+ S LGSA SYG IG+SSS  +L++ R+VVGLVKQT+T++TA++S+    +  R+  +S L AA+T + IVG A G  L+      PPLVA  +F + A L LI +P+       G++                          ++P L G    ++  G    S SF +      +NF++A      +RI+  +L++ F   +L   NFVGY E R+G+ S  + Y+ SY A LSF  Q ++V  +    + +       A+V  + L            +L +  PA           LQ ++T  +P G  GAALG ++ L S   V AP YGG++   +G   RP +   HY     + W++       P + E   R P SV+ G + +      +G++
Sbjct:   23 VGMEGSRKPSSLSAIHITDVVKVLLFVDMLSVDLVVPLLSSYFRDLNISTEQYGLMFSAYSLSQIVGGLVLGALSDRALSRRTVLLISFLGSALSYGTIGLSSSLTMLLVGRVVVGLVKQTVTISTAIVSE-HTAKEERSAEISKLGAAMTFASIVGSACGSLLYQKRKTFPPLVACALFLLNAALALILLPSGNGREVGGWTXXXXXXXXXXXXXXXXXXXXXXXXXXATPALDGGVGKSAERG--EDSSSFSSATRRFLANFKKACRSGPTLRILAAKLIFGFLFRALGSQNFVGYYEERFGVASASLGYMSSYTAGLSFFVQLYVVGRLASLASETHLVAMSLAVVALMNLAEGAPSIIGFWGYLALLIPARTVAHGTLQACLQSMFTQRVPQGDLGAALGVLNVLSSASGVVAPAYGGKLIGYLGILARPTVNAAHYAAFFVLWWVMEVARGRAPAEGEGGSRKPESVADGPVGEAAVDAGDGDS 508          
BLAST of NO17G01320 vs. NCBI_GenBank
Match: GAX12238.1 (hypothetical protein FisN_1Hh168 [Fistulifera solaris])

HSP 1 Score: 156.8 bits (395), Expect = 2.500e-34
Identity = 128/416 (30.77%), Postives = 203/416 (48.80%), Query Frame = 0
Query:  100 RSFLDLINEKIEQEPSTNPDTVSLYLKFIVSLDFLAVATVVPLLPQYLVRTGCCNE-QLAFISSAYSLAQLVGGVLLGWVSDG-IMTRKTILMTSLLGSAASYGMIGVSSSRPLLILSRIVVGLVKQTMTMTTALISDLPLDRSRRTKHMSHLTAAVTVSWIVGPALGGYLF-WLSPCLPPLVAAVIFTIAALLCLIGVPNHPDPPPPGFSPLSTSISSPDLLGMSNGNSGSGFKSKSKSFGTFLSTLRSNFREAFNDPTIIRIVGIRLLYSFTIISLMPTNFVGYLEARYGLKSHEVAYLHSYRATLSFLAQTFLVSAVVKHHTFSEEATA--RAAIVFGVFLKYSEVLNRDRLVFLFVTTPAIVGVFSLFDCSLQGIYTDSIPAGHRGAALGSMSALQSLVKVAAPLYGGEIFQ 511
            R F+ L++     E  + P T+ L    +V +D  AV+ VVPLL QY    G  N  Q   +SS +S +Q+VGG+L+G V+D   + RK++L  S  GSA SY +I        L+ SR++VGLVKQTMT+TTA+++     R+ R  +M  L+AA TV+WIVGP++G  L+ ++ P  P L+A V+F    LL    +P   +  PP     S  I                             T+    +  F   T+  +V  RL++++   +   +    + E  YGL+ H+  Y+ SY+  L FL Q+ +V+AV++      +      A + F   L+  + L     +FL V  P +   F +   SLQ + T  +P     + L ++  LQ+ V V+ P Y   +F+
Sbjct:   56 RKFVHLLSHLRSIERVSPPTTLLL----LVLIDMFAVSLVVPLLFQYYKSAGVNNAGQRELLSSLFSTSQIVGGLLMGLVTDARCVRRKSLLFLSFAGSALSYALIAFGGF-TALVCSRVLVGLVKQTMTVTTAMLTSW-TSRTTRAHYMGRLSAASTVAWIVGPSVGAMLYRYVDPRAPALLACVLFVTNILLAAKCLPTDEESDPPDVDSPSQRI-----------------------------TVLQKLKSCFTSQTLGTVVLARLIFTWVAKATNYSQLGNFYEDMYGLEPHQRGYISSYQQFLQFLVQSTMVTAVMRWSGGERQTICFFTALLAFTFLLESFQSLP----LFLTVLCPVMSLCFGMTQLSLQSLLTHVVPLHSVFSVLAALDVLQNAVSVSVPFYRTFLFR 432          
BLAST of NO17G01320 vs. NCBI_GenBank
Match: GAX21332.1 (hypothetical protein FisN_1Lh168 [Fistulifera solaris])

HSP 1 Score: 145.2 bits (365), Expect = 7.500e-31
Identity = 119/391 (30.43%), Postives = 194/391 (49.62%), Query Frame = 0
Query:  125 LKFIVSLDFLAVATVVPLLPQYLVRTGCCNE-QLAFISSAYSLAQLVGGVLLGWVSDG-IMTRKTILMTSLLGSAASYGMIGVSSSRPLLILSRIVVGLVKQTMTMTTALISDLPLDRSRRTKHMSHLTAAVTVSWIVGPALGGYLF-WLSPCLPPLVAAVIFTIAALLCLIGVPNHPDPPPPGFSPLSTSISSPDLLGMSNGNSGSGFKSKSKSFGTFLSTLRSNFREAFNDPTIIRIVGIRLLYSFTIISLMPTNFVGYLEARYGLKSHEVAYLHSYRATLSFLAQTFLVSAVVKHHTFSEEATA--RAAIVFGVFLKYSEVLNRDRLVFLFVTTPAIVGVFSLFDCSLQGIYTDSIPAGHRGAALGSMSALQSLVKVAAPLYGGEIFQ 511
            L  +V +D  AV+ VVPLL QY    G  N  Q   +SS +S +Q+VGG+L+G+++D   + RK++L  S +GSA SY +I        L+ SR++VGLVKQTMT+TTA+++     R+ R  +M  L+AA TV+WIVGP++G  L+ ++ P  P  +A V+F    LL    +P              T   S  L  +  G+   G +           T+    +  F    +  +V  RL++++   +   +    + E  YGL+ H+  Y+ SY+  L FL Q+ LV+ +++      +      A + F   L+  + L     +FL V  P +   F +   SLQ + T  +P     + L ++  LQ+ V V+ P Y   +F+
Sbjct:   82 LLLLVLIDTFAVSLVVPLLFQYYKSAGVNNAGQRELLSSLFSTSQIVGGLLMGFITDAKWVRRKSLLFISFIGSALSYALIAYGGF-TALVCSRVLVGLVKQTMTVTTAMLTSC-TSRTTRAHYMGRLSAASTVAWIVGPSVGAMLYRYVDPRAPAWLACVLFVGNILLAAKSLP--------------TQEESHFLQDVGTGSPSQGQR----------ITMLQKLKSCFTSQNLGSVVLARLIFTWVAKATNYSQLGNFYEDMYGLEPHQRGYISSYQQFLQFLVQSTLVTTIMRWSGGERQTICFFTALLAFTFLLESFQSLP----LFLTVLCPVMSLCFGMTQLSLQSLLTHVVPLHSMFSVLAALDVLQNAVSVSVPFYRTFLFR 442          
BLAST of NO17G01320 vs. NCBI_GenBank
Match: XP_005837185.1 (hypothetical protein GUITHDRAFT_135376 [Guillardia theta CCMP2712] >EKX50205.1 hypothetical protein GUITHDRAFT_135376 [Guillardia theta CCMP2712])

HSP 1 Score: 139.8 bits (351), Expect = 3.200e-29
Identity = 109/319 (34.17%), Postives = 162/319 (50.78%), Query Frame = 0
Query:  123 LYLKFIVSLDFLAVATVVPLLPQYLVRTGCCNEQLAFISSAYSLAQLVGGVLLGWVSDGIMTRKTILMTSLLGSAASYGMIGVSSSRPL---LILSRIVVGLVKQTMTMTTALISDLPLDRSRRTKHMSHLTAAVTVSWIVGPALGGYLF-WLSPCLPPLVAAVIFTIAALLCLIGVPN----HPDPPPPGFSPLSTSISSPDLLGMSNGNSGSGFKSKSKSFGTFLSTLRSNFREAFNDPTIIRIVGIRLLYSFTIISLMPTNFVGYLEARYGLKSHEVAYLHSYRATLSFLAQTFLVSAVVKHHTFSEEATARAAIV 434
            L LK  V LD + V   VPLLP Y    G   E L  ++S Y ++Q+V GV+LG+VSD +  RK IL+ S LGSA SY + G+S    L   L+LSR +VGLVKQTMT++ A+ + L  D   RT+ +SHL A  T++++VGP +GG L    +  +P   AA +F + AL+  I +PN    H  P        +                      +S S G          +E     T+I+ +    + +  + S        Y+  +Y L+ H + YL SY++ +S  +QT+LV+A+ K   F EE T +AA +
Sbjct:   22 LVLKLAVFLDMVGVGLYVPLLPFYWRELGVKTELLGLVASVYQISQIVSGVVLGYVSDHMSGRKNILLLSFLGSAVSYALAGLSYQNSLISTLVLSRFIVGLVKQTMTISRAITTSLTTDED-RTRSLSHLRACATLAFLVGPTMGGLLSKTFNKAVPAYAAAALFVLNALMVQIVLPNDISSHAHP--------AKXXXXXXXXXXXXXXXXXXXXVRSNSTGAVQGIRDLLEKEGLGSLTLIKFLNSVFVAACHVFSSK------YVTEKYELEPHHMGYLSSYQSLVSLASQTYLVAAISKR--FGEERTLQAAFL 323          
BLAST of NO17G01320 vs. NCBI_GenBank
Match: XP_002291984.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED90835.1 predicted protein [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 139.0 bits (349), Expect = 5.400e-29
Identity = 127/455 (27.91%), Postives = 216/455 (47.47%), Query Frame = 0
Query:  110 IEQEPSTNPDTVS--LYLKFIVSLDFLAVATVVPLLPQYLVRTGCCN-EQLAFISSAYSLAQLVGGVLLGWVSD-GIMTRKTILMTSLLGSAASYGMIGVSSSRPLLILSRIVVGLVKQTMTMTTALISDLPLD---RSRRTKHMSHLTAAVTVSWIVGPALGGYLFW-LSPCLPPLVAAVIFTIAALLCLIGVPNHPDPPPPGFSPLSTSISSPDLLGMSNGNSGSGFKSKSKSFGTFLSTLRSNFREAFNDPTIIRIVGIRLLYSFTIISLMPTNFVGYLEARYGLKSHEVAYLHSYRATLSFLAQTFLVSAVVKHHTFSEEATARAAIVFGVFLKYSEVLNRDRLVFLFVTTPAIVGVFSLFDCSLQGIYTDSIPAGHRGAALGSMSALQSLVKVAAPLYGGEIFQ---RVGHER----------RPEI----IFIHYVVLATVV-WLVFPP 539
            +++EP+T    +S    L  +V +D  +V+ VVPLL  Y    G  +  Q   +SS +S +Q++GG+L+G +SD G ++R+ IL+ S LGSA SY +I +      LI SR++VGLVKQTMT+++AL++    +    + R   M  L A+ TV+WI+GP+ G  L+  +    P   A  +F + ++L  + +P   D        +   I        SN +   G   K + +        +N +  F+  T+  +V   LLY +   +    N   + E +YG++ +   Y+ SY+  L+F+ Q+FLV  ++    F  E  A     F +       ++    +F  +  P +    ++   SL+ + T   P    G+ L ++  LQ+   V  P Y   +F+   RVG E            P++     FIH+V    V+ WL+  P
Sbjct:   46 MKREPTTRQSLISPPATLCVLVMIDMFSVSLVVPLLHTYYKSAGVHSANQREMLSSLFSTSQILGGLLIGALSDIGFLSRRHILLVSFLGSALSYALI-IGGGIQRLICSRVIVGLVKQTMTVSSALLAQYTSNSDATNDRAVWMGRLGASTTVAWILGPSFGSVLYQRVGEFAPAGAACGLFLLNSVLAAVLLPTEEDAKEDA-GAIKKDIKH------SNASERGG---KGRFY--------TNLKTCFSSSTLASVVTSLLLYGWVCRTTSYANMASFYEEKYGIEPYTRGYIKSYQQCLNFVVQSFLVRWLLSF--FGGERKAACIASFALAAATLCEIHASFQLFTILVCPIVAVSIAMISVSLRSLLTQVTPKESLGSVLAALDVLQNAASVTVPFYRTFLFELVTRVGSEEDVNADMKGDPSPKLWLFSSFIHWVGFTVVLCWLLVLP 479          
BLAST of NO17G01320 vs. NCBI_GenBank
Match: OEU15479.1 (MFS general substrate transporter [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 136.7 bits (343), Expect = 2.700e-28
Identity = 123/442 (27.83%), Postives = 214/442 (48.42%), Query Frame = 0
Query:  125 LKFIVSLDFLAVATVVPLLPQYLVRTGCCN-EQLAFISSAYSLAQLVGGVLLGWVSDG-IMTRKTILMTSLLGSAASYGMIGVSSSRPLLILSRIVVGLVKQTMTMTTALISDLPLDRSRRTKHMSHLTAAVTVSWIVGPALGGYLF-WLSPCLPPLVAAVIFT----IAALLCLIGVPNHPDPPPPGFSPLSTSISSPDLLGMSNGNSGSGFKSKSKSFGTFLSTLRSNFREAFNDPTIIRIVGIRLLYSFTIISLMPTNFVGYLEARYGLKSHEVAYLHSYRATLSFLAQTFLVSAVVKHHTFSEEAT--ARAAIVFGVFLKYSEVLNRDRLVFLFVTTPAIVGVFSLFDCSLQGIYTDSIPAGHRGAALGSMSALQSLVKVAAPLYGGEIFQRVGHER----------RPEII------FIHYVVLATVVWLVFPPGRH 542
            L  +V +D  +VA V+PLL QY  + G  +  Q   +SS +S +Q++GG+LLG+++D   + +KT+L  S  GSA +Y MI        LILSRI+VGLVKQTMT+TT++++        R+++M  L ++ T +WI+GP+ G  LF ++    P  VA+ +F     +A +L    + N+    P        S SS D       +S  G   + + F         N +  ++  ++  ++   LL+S+   +   ++   Y E  YG++ H   Y+ SY+  L F+ Q+ L+ +V++       A   A A +  G FL+  + L     VFL   +P+I    ++   SL+ + T   P     +   ++  LQ+   V+ P Y   +F+ +  E            P+ +        H+V+ A V+  +  PG++
Sbjct:   16 LPILVFIDNFSVALVIPLLFQYYKKAGVTSATQRELLSSVFSASQIIGGLLLGYLTDAKFLRKKTVLFLSFGGSAIAYLMIAYGGF-TALILSRILVGLVKQTMTVTTSMLTVCTAPEI-RSRNMGRLQSSSTAAWILGPSAGALLFKYIDHMAPVYVASFLFVLNMILAGVLLSDNIENNACLDPDSGKSKRDSTSSEDEYTYDKNHSNKG---RKRGFW-------ENLKSCYSSESLTSVIVGLLLFSWMYRATSYSSMGSYYEDMYGVEPHIRGYIQSYQRVLQFIVQSSLIQSVLERVGGERRAVFLACALLAGGTFLEARQNL----FVFLLAISPSIALSTTMISVSLRSLLTQLAPEDAIFSIFAALDVLQNATAVSVPFYRAFLFRLMTDENDNTGQTTMIGDPDPVSWVLCSAFHWVIAAIVMAYILRPGQN 441          
BLAST of NO17G01320 vs. NCBI_GenBank
Match: XP_002177818.1 (tetracycline resistance protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC50632.1 tetracycline resistance protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 131.7 bits (330), Expect = 8.600e-27
Identity = 117/396 (29.55%), Postives = 189/396 (47.73%), Query Frame = 0
Query:  118 PDTVSLYLKFIVSLDFLAVATVVPLLPQYLVRTGCCN-EQLAFISSAYSLAQLVGGVLLGWVSDG-IMTRKTILMTSLLGSAASYGMIGVSSSRPLLILSRIVVGLVKQTMTMTTALISDLPLDRSRRTKHMSHLTAAVTVSWIVGPALGGYLF-WLSPCLPPLVAAVIFTIAALLCLIGVPNHPDPPPPGFSPLSTSISSPDLLGMSNGNSGSGFKSKSKSFGTFLSTLRSNFREAFNDPTIIRIVGIRLLYSFTIISLMPTNFVGYLEARYGLKSHEVAYLHSYRATLSFLAQTFLVSAVVKHHTFSEEATARAAIVFGVFLKYSEVLNRDRLVFLFVTTPAIVGVFSLFDCSLQGIYTDSIPAGHRGAALGSMSALQSLVKVAAPLYGGEIFQ 511
            P TVSL L  +V LD LAV+ VVPLL QY    G     +   +S+ +S +Q++GG+L+G ++D  ++ RK+IL  S  GSA SY +I V    P LI SR++VGLVK TMT+ T ++S+    +  R KHM  LTA+ T +WIVGP++G   + ++    P L A  IF    +L  + +          F        +PD     + ++      K K+ G   +T+ +  +  F    +  +V  +L+ ++   +   +    + E  Y L S+   Y+ S++  L F AQ  LV  V++        T     V  V + +          FL    P +    ++   SLQ + T   P+    + L ++  LQ+ V V+ P Y   +F+
Sbjct:   60 PPTVSLPL--LVLLDMLAVSLVVPLLFQYYQTAGVTRAHERELLSALFSASQIIGGLLVGALTDAKLVRRKSILFLSFGGSALSYALI-VYGGLPALIFSRVLVGLVKHTMTVATTMLSNC-TTKDTRAKHMGRLTASSTAAWIVGPSIGALAYQYVDERAPALFACAIFATNMVLAAVLLEGDT------FESSHPKNDNPD---EQSDHTNVEHDEKKKAVGG--NTIFNRLKSCFTSKALSSVVLTQLVVTWVSKATSFSQLGSFYEDMYDLPSYHRGYISSFQQLLHFAAQATLVGPVMQQLGGERRTTCLCTAVLSVAVLFK--AQGSLWFFLIALCPVLALCSTMIHLSLQTLVTHVAPSESIFSVLAALDVLQNAVSVSVPFYRTILFR 438          
BLAST of NO17G01320 vs. NCBI_GenBank
Match: XP_004353172.1 (transporter, major facilitator subfamily protein [Acanthamoeba castellanii str. Neff] >ELR23644.1 transporter, major facilitator subfamily protein [Acanthamoeba castellanii str. Neff])

HSP 1 Score: 116.7 bits (291), Expect = 2.900e-22
Identity = 112/407 (27.52%), Postives = 186/407 (45.70%), Query Frame = 0
Query:  128 IVSLDFLAVATVVPLLPQYLVRTGCCNEQLAFISSAYSLAQLVGGVLLGWVSDGIMTRKTILMTSLLGSAASYGMIGVSSSRPLLILSRIVVGLVKQTMTMTTALISDLPLDRSRRTKHMSHLTAAVTVSWIVGPALGGYLFWLSPCLPPLVAAVIFTIAALLCLIGVPNHPDPPPPGFSPLSTSISSPDLLGMSNGNSGSGFK------SKSKSFGTFLSTLRSNFREAFNDPTIIRIVGIRLLYSFTIISLMPTNFVGYL-------------EARYGLKSHEVAYLHSYRATLSFLAQTFLVSAVVKHHTFSEEATARAAIVFGVFLKYSEVLNRDRLVFLFVTTPAIVGVFSLFDCSLQGIYTDSIPAGHRGAALGSMSALQSLVKVAAPLYGGEIFQRVGHE 516
            +V +D LAV  V+PLLP Y    G       ++ S Y ++QL+G  L+G +SD    R   L+ S L S  SY M+G++ S  +L LSRI VG++KQTM+++ A +SD+  D + R K++  L  AV V +I+GPALGG L  +S  LP LVA+ +F   ++   +            F P  ++I   +     +G+ G   +       +S+S    +   ++  R+ ++    +  V + +    +++ L+ T+F   L             + R+ L +    +L SY   LS   Q   V  + K   FSE    + A  FG+ +          L  L V    +V    +    +    T  +P    G  +G + ++QSL    +P  GG + +  G E
Sbjct:   29 LVFVDMLAVGLVIPLLPYYASNLGADAVTYGYLGSIYGISQLIGSPLMGSLSDR-YGRVNTLIVSFLASVVSYAMMGMAGSLAMLFLSRIPVGVLKQTMSISYAYVSDV-TDSTSRAKYLGFLGVAVGVGFIIGPALGGVLSEVSYTLPALVASAMFVFDSVFAYL------------FLPDGSTIMLDEEKERESGDEGLEGEIDVEKAKESQSEDEVVLPAQAKARQQWDIRAYLNWV-LCVFKDTSVLFLIATSFAATLAFTTYRVTFPMISQVRFDLDARANGFLLSYMGLLSVFVQGSAVGYLTKR--FSEGRLVQLA-SFGLGVSLCACALAFNLPMLAVALIPLVVCNGVLSTCILSTVTKKVPKADLGGVIGLLGSVQSLCSAVSPSLGGLLLKHGGAE 417          
BLAST of NO17G01320 vs. NCBI_GenBank
Match: PRP87326.1 (major facilitator transporter [Planoprotostelium fungivorum])

HSP 1 Score: 116.3 bits (290), Expect = 3.700e-22
Identity = 104/405 (25.68%), Postives = 175/405 (43.21%), Query Frame = 0
Query:  129 VSLDFLAVATVVPLLPQYLVRTGCCNEQLAFISSAYSLAQLVGGVLLGWVSDGIMTRKTILMTSLLGSAASYGMIGVSSSRPLLILSRIVVGLVKQTMTMTTALISDLPLDRSRRTKHMSHLTAAVTVSWIVGPALGGYLFWLSPCLPPLVAAVIFTIAALLCLIGVPNHPDPPPPGFSPLSTSISSPDLLGMSNGNSGSGFKSKSKSFGTFLSTLRSNFREAFNDPTIIRIVGIRLLYSFTIISLMPTNFVGYLEARYGLKSHEVAYLHSYRATLSFLAQTFLVSAVVKHHTFSEEATARAAIVFGVFLKYSEVLNRDRLVFLFVTTPAIVGVFSLFDCSLQGIYTDSIPAGHRGAALGSMSALQSLVKVAAPLYGGEIFQRVGHERRPEIIFIHYVVLATVVW 534
            V LDF  V  +VPLLP Y    G         S+ Y ++Q++GG ++G V D    R+T+L+ S  G+A  Y  +G+S+S   L+LSRI VGL+KQTM+++ A +++L    S R K + ++  A  + +I+GP L G         P   A+ +F +  +  LI            F P  +++ S         N+    K + K   +     +    + F  P    ++ I   ++        +N   Y + RYGL     +YL SY + L  ++QTF++    K   +SE+      I+      +  VL      +     P +   +S+    L  + T        G  +G   +L+S  ++ AP   G    ++GH   P +     + L   VW
Sbjct:   25 VLLDFTGVGIIVPLLPFYATSLGADATMFGIFSTVYGISQMLGGPIMGRVGDQ-FGRRTVLLLSFSGAAIGYLGVGLSTSLWWLMLSRIPVGLMKQTMSVSKAFVAEL-ASPSNRAKTLGYVRTAAGIGFIIGPILAGVFSKYDSKFPAFFASFLFIVDVIFVLI------------FIPQPSAVISV--------NTMEEEKPEPKPIFSLEVFSKKQLNDLFFGP--FGLLFIIHFWTHLAHIFFHSNLTLYTQTRYGLDPSTNSYLFSYMSLLDVISQTFIIGTATK--KYSEQTIVTRGILVNSVAFFLVVLFDPLWTYALALIP-LTASYSVSMTCLSSLITKVARKQELGVTVGLSDSLESFCRILAPAISGFFLSKLGHLSLPAVAGSMLLGLYVYVW 402          
The following BLAST results are available for this feature:
BLAST of NO17G01320 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM24258.15.000e-26975.22major facilitator superfamily mfs_1 [Nannochlorops... [more]
CBN78693.13.600e-4931.49conserved unknown protein [Ectocarpus siliculosus][more]
GAX12238.12.500e-3430.77hypothetical protein FisN_1Hh168 [Fistulifera sola... [more]
GAX21332.17.500e-3130.43hypothetical protein FisN_1Lh168 [Fistulifera sola... [more]
XP_005837185.13.200e-2934.17hypothetical protein GUITHDRAFT_135376 [Guillardia... [more]
XP_002291984.15.400e-2927.91predicted protein [Thalassiosira pseudonana CCMP13... [more]
OEU15479.12.700e-2827.83MFS general substrate transporter [Fragilariopsis ... [more]
XP_002177818.18.600e-2729.55tetracycline resistance protein [Phaeodactylum tri... [more]
XP_004353172.12.900e-2227.52transporter, major facilitator subfamily protein [... [more]
PRP87326.13.700e-2225.68major facilitator transporter [Planoprotostelium f... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL156nonsL156Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR035ncniR035Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR028ngnoR028Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK002921NSK002921Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO17G01320.1NO17G01320.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|599920gene_7758Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100020g70gene6194Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO17G01320.1NO17G01320.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO17G01320 ID=NO17G01320|Name=NO17G01320|organism=Nannochloropsis oceanica|type=gene|length=3128bp
AAAAGGGGCCGAGCACCGAGCATGTCGTGAAATCGCGGATACTGCCACAC
TGTCCCTCGAAGGACCATTATCCTTTTGCCAACACGCCACACCCCCACAT
GCCCTCCCGTATAAGCAGACAGGCTGCCAAGGTACCTAGCATCCTTGCCA
TTTTTGGGGGGACCCCTGATCTCCCCACCGCACGCATACCACTCAAACAC
AATCCACGTACGCTTCCGTGTGCTCAGCGAAGATCGTCGTCGTGTTTTTG
AGGACGTTGCTCCCTACTCCCAGTCAACGCACCCACGCATCCCTATTTCC
CACGAGACAGACGATTTCTTCCCAACCCAGCTGCAGGACGCCCGTGCTGC
TTGCCGCTGGCCGGCTAGTCCCGCGGTACTGTTTGTCTTCGCATCTCCTC
ATCAATCCCACCAGCCATGACCGACTCGCTTCGCCAGCGCCCCAGCCGGA
GACGAGAGGAAAGTGTGAGCCCCCTTGTGAAACATTACCTGCCTGAATCT
GCTGCTGTCAAAGgtacgtacgagaagaagcgaagaagagaaggggactt
gtgccattttgacatggtgtcagcatgccctttttggtctccgtccatct
cctcctatgacctcctacttctcctacctctcctcaacttatccatgata
tcccttccacacctgcgcacaatcttctctctcatcgccccgcgcatctc
accttgatttgattgctgagctccacctcgctgtcattatcaccaccttt
aaacaacaccaaacaatgatgcctccgcaatgacatgctccgccctttat
tgtgcaccttgtgcctcactgctcatttcttccctaaccaccctcaatcc
caccccacttgttattcttttaacaaacataatcagACAAAACATCACCT
CCAACCAGAAGCAGCAGCAGCAGCACCACCAGCAGCACCCATAGCACCGA
GCACGAAGATGACCGAAATGGCGACTTCCCACCCCTATTAATGAGCCCCC
ACCGCTCCCACAGCGACGGCGGTGACGTCTTCCACGGCCACGGCGGGAAC
ACAACCCCTTGCAACGGCGGAGGGATGAAACGCTCCCGCTCTTTCCTCGA
CTTGATAAATGAAAAAATCGAGCAAGAGCCAAGCACCAACCCGGACACCG
TCTCCCTATACCTCAAATTCATCGTTTCCTTGGACTTCCTCGCTGTTGCG
ACCGTCGTCCCCCTTCTCCCCCAATATTTGGTCCGAACGGGCTGTTGTAA
CGAGCAGCTAGCCTTCATTTCCTCTGCCTACAGCCTCGCCCAGTTGGTAG
GAGGGGTACTCCTAGGCTGGGTCTCCGACGGGATCATGACGCGAAAAACA
ATCCTAATGACTTCCCTCTTGGGCTCCGCTGCATCCTATGGCATGATAGG
CGTGTCCTCCTCCCGCCCACTCCTTATACTGTCCCGTATCGTGGTTGGGT
TGGTCAAACAAACCATGACAATGACTACGGCCTTGATTTCCGACCTCCCC
CTCGACCGGTCCCGTCGGACCAAGCACATGTCCCACCTCACGGCCGCCGT
GACTGTCTCCTGGATTGTAGGCCCTGCCCTCGGGGGATACCTCTTCTGGC
TCTCCCCCTGCCTGCCCCCCCTCGTTGCTGCCGTCATATTCACCATTGCC
GCCTTGCTCTGCTTGATAGGTGTCCCCAACCACCCCGACCCCCCACCACC
TGGCTTTTCCCCGCTTTCCACCTCCATCTCCTCGCCAGACCTGCTCGGCA
TGTCTAATGGCAACAGTGGAAGTGGGTTTAAGTCCAAGAGTAAGAGCTTC
GGCACATTCTTGTCGACGCTTCGGAGCAACTTCAGGGAGGCGTTCAATGA
CCCAACCATTATTAGAATAGTGGGGATAAGACTCCTCTACAGCTTCACCA
TCATTTCCCTCATGCCCACCAATTTCGTGGGATATTTGGAGGCGAGATAT
GGGCTCAAGAGCCATGAAGTCGCCTACTTGCATTCTTACCGCGCAACGCT
GTCGTTTTTAGCACAGACGTTTTTGGTGTCGGCGGTGGTGAAACACCATA
CGTTTTCGGAGGAAGCGACCGCGAGGGCCGCGATTGTGTTTGGGGTTTTT
CTCAAGTACTCCGAGGTGCTGAACCGCGATCGGTTGGTTTTCTTATTTGT
GACCACCCCTGCTATAGTCGGTGTTTTTTCTCTGTTCGATTGTTCTTTGC
AGGGAATTTATACAGACAGTATTCCAGCAGGGCACAGGGGGGCTGCGCTA
GGATCAATGTCGGCGTTGCAGTCGCTGGTTAAGGTTGCGGCGCCTTTGTA
TGGGGGGGAGATTTTCCAACGAGTGGGTCATGAACGCCGACCGGAGATTA
TCTTCATTCATTATGTGGTGTTAGCGACGGTGGTCTGGCTTGTCTTTCCC
CCTGGCCGGCACCGACCAAAGCAACATGAACAGCGCCTGCCCCCGTCAGT
GTCGACCGGCTCGTTATCACAGATTGTGGAAGGGAAGGAGGAGGGAAATG
CGCTTTATGGGAATGATGACATGAGCAGTAGCAGTAGTAGTGAAGGTAGA
AGTAGAGGGAGCAGCAGTACCAGTACCGGACTCGTCAGACGGAATGTGTC
TGCCCATCCCCTCCACGGCAACCCCTCCACTGCCTCACTCTCTGACGCCG
TGCCGGTCATGCGTCCCGCCCACGAACTCACCACTTTGACTGATGAGGCT
ATTGCTTCTGCTCCTGCTACTATTTCTTCCTCTTCGCGAGGCGGCAACAG
CAGTAGGGAGCCGGTGGCGATCCGGAGGGGAGGAATGACCAGCCTTCCGA
GTTCGGAGAGGCTGCATCCGATTAGGGGCAGGTTTGACAGGGGAAGCAGG
GTTAGGATTGGGCAAATATAGATAGAAAGGAGAGACGAAGGAGGACGAGA
GAGTCGGCACATGGAGAGGTAGGTTGGGCCGCACCAACTGCAGCAACAGC
AGCAACTGCAGCAAGTGTTCTGCCAAAGACTAGAATTCCCACTTATTTTA
TTCCTCACCTCGCAATCGTCAAGTCGCTTTAGTCGGAAGGGGTAGGGAAT
AGGAGGGGAGGGAAAGATTATCTCACACACACTGTTTTCACCACAAAAAC
AAAGAAAGAAAGCGAAATCTAAACAAAG
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protein sequence of NO17G01320.1

>NO17G01320.1-protein ID=NO17G01320.1-protein|Name=NO17G01320.1|organism=Nannochloropsis oceanica|type=polypeptide|length=694bp
MTDSLRQRPSRRREESVSPLVKHYLPESAAVKDKTSPPTRSSSSSTTSST
HSTEHEDDRNGDFPPLLMSPHRSHSDGGDVFHGHGGNTTPCNGGGMKRSR
SFLDLINEKIEQEPSTNPDTVSLYLKFIVSLDFLAVATVVPLLPQYLVRT
GCCNEQLAFISSAYSLAQLVGGVLLGWVSDGIMTRKTILMTSLLGSAASY
GMIGVSSSRPLLILSRIVVGLVKQTMTMTTALISDLPLDRSRRTKHMSHL
TAAVTVSWIVGPALGGYLFWLSPCLPPLVAAVIFTIAALLCLIGVPNHPD
PPPPGFSPLSTSISSPDLLGMSNGNSGSGFKSKSKSFGTFLSTLRSNFRE
AFNDPTIIRIVGIRLLYSFTIISLMPTNFVGYLEARYGLKSHEVAYLHSY
RATLSFLAQTFLVSAVVKHHTFSEEATARAAIVFGVFLKYSEVLNRDRLV
FLFVTTPAIVGVFSLFDCSLQGIYTDSIPAGHRGAALGSMSALQSLVKVA
APLYGGEIFQRVGHERRPEIIFIHYVVLATVVWLVFPPGRHRPKQHEQRL
PPSVSTGSLSQIVEGKEEGNALYGNDDMSSSSSSEGRSRGSSSTSTGLVR
RNVSAHPLHGNPSTASLSDAVPVMRPAHELTTLTDEAIASAPATISSSSR
GGNSSREPVAIRRGGMTSLPSSERLHPIRGRFDRGSRVRIGQI*
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Synonyms
Publications