NO17G00980, NO17G00980 (gene) Nannochloropsis oceanica

Overview
NameNO17G00980
Unique NameNO17G00980
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2529
Alignment locationchr17:312536..315064 +

Link to JBrowse

Properties
Property NameValue
DescriptionTryptophanyl-trna cytoplasmic
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr17genomechr17:312536..315064 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006418tRNA aminoacylation for protein translation
GO:0006412translation
Vocabulary: Molecular Function
TermDefinition
GO:0005524ATP binding
GO:0000166nucleotide binding
GO:0004812aminoacyl-tRNA ligase activity
GO:0003824catalytic activity
Vocabulary: INTERPRO
TermDefinition
IPR018163Thr/Ala-tRNA-synth_IIc_edit
IPR002305aa-tRNA-synth_Ic
Homology
BLAST of NO17G00980 vs. NCBI_GenBank
Match: EWM21129.1 (tryptophanyl-trna cytoplasmic [Nannochloropsis gaditana])

HSP 1 Score: 552.0 bits (1421), Expect = 1.900e-153
Identity = 311/480 (64.79%), Postives = 329/480 (68.54%), Query Frame = 0
Query:   32 MATPSELRTPQAVTSALIVKGALANVLGFPIGSTTIGTHYSEGHRVRLTVQIGKAPDPTEAQFIKVAETINALLAANQPVHVLKLPRSQAEETYKKAMYNRHAVPESVTELTIAYIEGLAFSCTGEAVVASTGLVGSITINKTKFRSAKKELEVQYTVE------EAVKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQVVTPWEVEGDQEIDYDRLIKSFGSMRITEDVVSRIERLTGVKCHRFLRRGLFFSHRDLTQLLDMYEKGTKFYLYTGRGPSSESLHLGHLIPFHFTRWLQAAFDVPLVIQLTDDEKFQFKQGLTLEECHRLAYENAKDIIACGFN----------------------------------------------------------------------------------DAYFRMTRDVAPRLGYKKPSLIHSKFFPGLEGKG 424
            MA+PSELRTPQAVTSALIVKGALANVLGFPIG TTIGTHYSEGHRVRLTVQIG+APDPTE QFI+VAETIN +LAANQPVHV KL R +A+ +YK AMYNRHAVPES+TELTIAYIE +AFSCT EAVVASTG+VG+ITINKTKFRSAKKELE+QYTV        AV                                       XXXXXXXX    QVVTPWEVEGDQEIDYD+LIKSFGSMRITE +VSRIERLT  KCHRFLRRGLFFSHRDLTQLLD+YEKGTKFYLYTGRGPSSESLHLGHLIPFHFTR+LQ AFDVPLVIQLTDDEKFQFKQGL LEECHRLAYENAKD+IACGF+                                                                                  DAYFRMTRDVAPRLG KKPSLIHSKFFPGLE  G
Sbjct:    1 MASPSELRTPQAVTSALIVKGALANVLGFPIGGTTIGTHYSEGHRVRLTVQIGQAPDPTETQFIQVAETINTILAANQPVHVFKLARHRAQTSYKNAMYNRHAVPESITELTIAYIEKIAFSCTAEAVVASTGMVGAITINKTKFRSAKKELEIQYTVSTPSESGPAVLAVAKEDDETLPSSEAISLLNSDTVRQASGGKGNEKGGNXXXXXXXXGEGGQVVTPWEVEGDQEIDYDKLIKSFGSMRITESLVSRIERLTNRKCHRFLRRGLFFSHRDLTQLLDLYEKGTKFYLYTGRGPSSESLHLGHLIPFHFTRYLQEAFDVPLVIQLTDDEKFQFKQGLALEECHRLAYENAKDVIACGFDVKKTFIFSDLDYIQHLYPTVLKIQKLVTFNQARGIFGFTESDSCGKIAFPAVQAAPSFPSSFPVPLKGCLDMPCLIPCAIDQDAYFRMTRDVAPRLGCKKPSLIHSKFFPGLEVSG 480          
BLAST of NO17G00980 vs. NCBI_GenBank
Match: CBN78295.1 (Tryptophan--tRNA ligase [Ectocarpus siliculosus])

HSP 1 Score: 466.8 bits (1200), Expect = 8.100e-128
Identity = 259/544 (47.61%), Postives = 318/544 (58.46%), Query Frame = 0
Query:   32 MATPSELRTPQAVTSALIVKGALANVLGFPIGSTTIGTHYSEGHRVRLTVQIGKAPDPTEAQFIKVAETINALLAANQPVHVLKLPRSQAEETYKKAMYNRHAVPESVTELTIAYIEGLAFSCTGEAVVASTGLVGSITINKTKFRSAKKELEVQYTVEEAV-KXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQVVTPWEVEGDQEIDYDRLIKSFGSMRITEDVVSRIERLTGVKCHRFLRRGLFFSHRDLTQLLDMYEKGTKFYLYTGRGPSSESLHLGHLIPFHFTRWLQAAFDVPLVIQLTDDEKFQFKQGLTLEECHRLAYENAKDIIACGFN----------------------------------------------------------------------------------DAYFRMTRDVAPRLGYKKPSLIHSKFFPGLEGKGGKMSASAESSAIYVTDTAKKIKQKIGRAFSGGQETADLQKELGADLEVDVAYQYLTFFLEDDEELLRLG 493
            MAT  + RTP   T+  IVKGAL  V+GFPIG +TIG+  SEG++ R+TV+ GKA  PT AQ  KV + +N  +A +Q    L +PR  AE TY  AMY+    P  V EL++ YIEGL         + STG VG +++ K KFR  K+ELEV + VE +                                                     Q VTPWEVE D E+DY++L+KSFGS  ITED+V+R+ER+TG K HRFLRRGLFFSHRDLTQ+LD+YE G KF+LYTGRGPSS++LHLGHL+PFHFT++LQ AF VPLV+QLTDDEKF FK  L LEECHRLA+ENAKDIIACGF+                                                                                  DAYFRMTRDVAPR+  +KP+LIHS+FFPGL+G GGKMS+S ESSAI+VTDT KK+K+KI   FSGGQET +LQ+  GA++ VDV YQYLTFF+EDD+EL R+G
Sbjct:    1 MATTVDPRTPTMTTALEIVKGALCAVIGFPIGKSTIGSRISEGNKARITVKTGKAEAPTAAQMQKVVDVVNEAIAKDQACFRLTMPRKDAESTYGSAMYDVVEPPAQVEELSLLYIEGLVLHSQLHPCLPSTGPVGKVSVTKQKFRVNKQELEVMFDVEPSTDTPTDDTATPPQCVPPSAETVVLLNASEARVSADDGVEGGVEESGKAAAEGGQKVTPWEVEADGEVDYEKLVKSFGSSLITEDIVARVERVTGRKAHRFLRRGLFFSHRDLTQILDLYEAGKKFFLYTGRGPSSDALHLGHLVPFHFTKYLQEAFKVPLVVQLTDDEKFLFKPELKLEECHRLAFENAKDIIACGFDPESTFIFSDLDYIQHMYPVVLKIQKLVTYNQVRGIFGFTESHNIGCQAFPAVQAAPSFSSSFPIPLGGTPDRPCLIPCAIDQDAYFRMTRDVAPRMKLRKPALIHSRFFPGLQGPGGKMSSSTESSAIFVTDTPKKVKKKINGCFSGGQETKELQELHGANIHVDVPYQYLTFFMEDDDELKRIG 544          
BLAST of NO17G00980 vs. NCBI_GenBank
Match: CEM21761.1 (unnamed protein product [Vitrella brassicaformis CCMP3155])

HSP 1 Score: 372.9 bits (956), Expect = 1.600e-99
Identity = 251/564 (44.50%), Postives = 306/564 (54.26%), Query Frame = 0
Query:   39 RTPQAVTSALIVKGALANVLGFPIGSTTIGTHYSEGHRVRLTVQIGK-APDPTEAQFIKVAETINALLAANQPVHVLKLPRSQAEETYKKAMYNRHAVPESVTELTIAYIEGLAFSCTGEAVVASTGLVGSITINKTKFRSAKKELEVQY----------------TVEEAV--KXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQVVTPWEVEGDQE--IDYDRLIKSFGSMRITEDVVSRIERLTGVKCHRFLRRGLFFSHRDLTQLLDMYEKGTKFYLYTGRGPSSESLHLGHLIPFHFTRWLQAAFDVPLVIQLTDDEKFQFKQGLTLEECHRLAYENAKDIIACGFN----------------------------------------------------------------------------------DAYFRMTRDVAPRLGYKKPSLIHSKFFPGLEGKGGKMSASAESSAIYVTDTAKKIKQKIGR-AFSGGQETADLQKELGADLEVDVAYQYLTFFLEDDEELLRLGGSTKRG 499
            R P   T+  IVKGAL   L  P   +T    + +G  +R  + +G    +P E    ++ E +N  +AAN P+ V  + R  AE TY +AMY+   VP+SVTEL + +IE    +     V  STG  G I I K K  S K  LEV +                  EEA+                                 XXXXXXXXXXXXXXXXXX  Q VTPWEVE D+E  IDYD+LI  FG  +ITED +SRIERLT  + HRFLRRGLFFSHRDL  LL+ YE+G  FYLYTGRGPSSE+LHLGHL+PF FT+WLQ AF+VPLVIQLTDDEKF FK+ LT+EEC RLAYENAKDI+A GF+                                                                                  D YFRMTRDVAPRLG+ KP+LIHS+F P L+G   KM+ S  +S+I+VTDT K+IK KI + AFSGG+ T +  +ELGADL VDV+YQYLT+ +EDD+EL R+G     G
Sbjct:    7 RHPLLDTALHIVKGALVVALRIPTARSTKSVDFKKGLPLRGAITVGPVTSEPNEEDKRRIQELVNDKVAANVPIRVFAVARQLAETTYGEAMYDDFGVPKSVTELRLVFIEKWNINANIFPVAQSTGACGRIDITKWKHNSNKNSLEVSFDLTPTEAYTDEQNVPLATEEALANDQVPAREMVLPPADVAGTHGTDEATETNGNPXXXXXXXXXXXXXXXXXXGGQRVTPWEVEADEETGIDYDKLIIQFGCSKITEDHISRIERLTKQRAHRFLRRGLFFSHRDLDMLLNAYEQGEPFYLYTGRGPSSEALHLGHLVPFWFTKWLQDAFNVPLVIQLTDDEKFLFKENLTVEECKRLAYENAKDILAIGFDKDKTFIFSDLDYIQTMYPLVLQIQKKVTYNQSRGIFGFTESDNIGKSAFPAVQAAPAFPACFPAMFGNRKDIMCLIPQAIDQDPYFRMTRDVAPRLGFNKPALIHSRFVPALQGNQTKMAGSQVASSIFVTDTPKEIKTKINKYAFSGGRATVEEHRELGADLSVDVSYQYLTYLMEDDQELKRIGDDYAAG 570          
BLAST of NO17G00980 vs. NCBI_GenBank
Match: XP_002787529.1 (IFP53, putative [Perkinsus marinus ATCC 50983] >EER19325.1 IFP53, putative [Perkinsus marinus ATCC 50983])

HSP 1 Score: 364.0 bits (933), Expect = 7.400e-97
Identity = 223/545 (40.92%), Postives = 284/545 (52.11%), Query Frame = 0
Query:   39 RTPQAVTSALIVKGALANVLGFPIGSTTIGTHYSEGHRVRLTVQIGKAPDPTEAQFIKVAETINALLAANQPVHVLK-LPRSQAEETYKKAMYNRHAVPESVTELTIAYIEGLAFSCTGEAVVASTGLVGSITINKTKFRSAKKELEVQYTVEEAVKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQVVTPWEVEG-DQEIDYDRLIKSFGSMRITEDVVSRIERLTGVKCHRFLRRGLFFSHRDLTQLLDMYEKGTKFYLYTGRGPSSESLHLGHLIPFHFTRWLQAAFDVPLVIQLTDDEKFQFKQGLTLEECHRLAYENAKDIIACGFN----------------------------------------------------------------------------------DAYFRMTRDVAPRLGYKKPSLIHSKFFPGLEGKGGKMSASAESSAIYVTDTAKKIKQKIGR-AFSGGQETADLQKELGADLEVDVAYQYLTFFLEDDEELLRLGGSTKRG 499
            R+P    +  ++KGA+  VL  P G TT      EG   +LT+   K  +PTE Q   +   ++  +  N P  V   +PR  AE+ Y   MY+   VP+SV EL + Y+E    +C    +V STGL+G I + K K+ + K  LE+ +TV+                                                      Q VTPWEVEG D+ IDYD+LI+ FG   I + ++ R+E+LTG K HRFLRRGLFFSHRDL  LLD YE+G  FYLYTGRGPSSESLHLGHL+PF FT+WLQ  FDVPLVIQLTDDEKF FK  L+LEE HRLAYENAKDIIACGF+                                                                                  D YFR+TRDVAPR+G  KP+LIHSKFFP L+G   KMS S  ++ I VTD+ K+IK KI +  FSGGQ++A+ Q++ GA+LEVDVAY+YL + +EDDE+  ++G     G
Sbjct:    7 RSPAFDAALHVIKGAVCTVLRIPTGRTTDRVSPHEGGG-KLTLNAIK-DEPTEEQKELIVTNVHNKVEENAPFKVFTGVPRDLAEKKYFDTMYDSFKVPDSVKELRLVYLEQWNLNCNVHPIVKSTGLLGDINLTKWKYSAKKSTLEISFTVD----------PPCDVFEMAEEDSNVEDLPPLDIAVPYVPDEQLSQDGVLGVSEGQKVTPWEVEGSDEGIDYDKLIRDFGCSPIDQKLIDRMEKLTGKKAHRFLRRGLFFSHRDLGILLDKYERGIPFYLYTGRGPSSESLHLGHLVPFQFTKWLQDTFDVPLVIQLTDDEKFFFKDYLSLEEAHRLAYENAKDIIACGFDMDKTFIFSDLDYMGTMYPNVCKIQKLVTYNQARGAFGFTGSDSVAKSSFCAIQASPSFSTTFPSIFGDRKDIMCLIPQAIDQDPYFRVTRDVAPRMGMLKPALIHSKFFPALQGHKTKMSGSVGNTTIMVTDSPKEIKSKIMKYCFSGGQDSAEEQRKYGANLEVDVAYEYLRYIMEDDEKFEQIGEEYSSG 539          
BLAST of NO17G00980 vs. NCBI_GenBank
Match: XP_002766059.1 (IFP53, putative [Perkinsus marinus ATCC 50983] >EEQ98776.1 IFP53, putative [Perkinsus marinus ATCC 50983])

HSP 1 Score: 363.2 bits (931), Expect = 1.300e-96
Identity = 224/550 (40.73%), Postives = 284/550 (51.64%), Query Frame = 0
Query:   36 SELRTPQAVTSALIVKGALANVLGFPIGSTT--IGTHYSEGHRVRLTVQIGKAPDPTEAQFIKVAETINALLAANQPVHVLK-LPRSQAEETYKKAMYNRHAVPESVTELTIAYIEGLAFSCTGEAVVASTGLVGSITINKTKFRSAKKELEVQYTVEEAVKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQVVTPWEVEG-DQEIDYDRLIKSFGSMRITEDVVSRIERLTGVKCHRFLRRGLFFSHRDLTQLLDMYEKGTKFYLYTGRGPSSESLHLGHLIPFHFTRWLQAAFDVPLVIQLTDDEKFQFKQGLTLEECHRLAYENAKDIIACGFN----------------------------------------------------------------------------------DAYFRMTRDVAPRLGYKKPSLIHSKFFPGLEGKGGKMSASAESSAIYVTDTAKKIKQKIGR-AFSGGQETADLQKELGADLEVDVAYQYLTFFLEDDEELLRLGGSTKRG 499
            S  R+P    +  ++KGA+  VL  P G TT  +  H   G   +LT+   K  +PTE Q   +A  +   +  N P  V   +PR  AE  Y   MY+   VPESV EL + Y+E    +C    ++ STGL+G + +   K+ + K  LE+ +TVE +                                                    Q VTPWEVEG D+ IDYD+LI+ FG   I + ++ R+E+LTG K HRFLRRGLFFSHRDL  LLD YE+G  FYLYTGRGPSSESLHLGHL+PF FT+WLQ  FDVPLVIQLTDDEKF FK  L+LEE HRLAYENAKDIIACGF+                                                                                  D YFR+TRDVAPR+G  KP+LIHSKFFP L G   KMS S  ++ I VTD+ K+IK KI +  FSGGQ++A+ Q++ GA+LEVDVAY+YL + +EDDE+  ++G     G
Sbjct:    2 SVTRSPAFDAALHVIKGAVCTVLRIPTGRTTERVSPHLGGG---KLTLNSIK-EEPTEEQKELIATNVYNKVEENAPFKVFTGVPRDLAERKYFDTMYDSFKVPESVKELRLVYLEQWNLNCNVHPIIKSTGLLGEVNLTHWKYSAKKATLEISFTVEPS----------CDVFEMAEEDGNVEDLPSLDIAVPYVPDEQLDQNRVLGVSNCQKVTPWEVEGSDEGIDYDKLIRDFGCSPIDQKLIDRMEKLTGKKAHRFLRRGLFFSHRDLGILLDKYERGIPFYLYTGRGPSSESLHLGHLVPFQFTKWLQDTFDVPLVIQLTDDEKFFFKDYLSLEEAHRLAYENAKDIIACGFDMDKTFIFSDLDYMGTMYPNVCKIQKLVTYNQARGAFGFTGSDSVGKSSFCAIQASPSFSTTFPSIFGDRKDIMCLIPQAIDQDPYFRVTRDVAPRMGMLKPALIHSKFFPALRGHKTKMSGSVGNTTIMVTDSKKEIKNKIMKYCFSGGQDSAEEQRKYGANLEVDVAYEYLRYVMEDDEKFKQIGEDYSSG 537          
BLAST of NO17G00980 vs. NCBI_GenBank
Match: XP_002783213.1 (IFP53, putative [Perkinsus marinus ATCC 50983] >EER15009.1 IFP53, putative [Perkinsus marinus ATCC 50983])

HSP 1 Score: 363.2 bits (931), Expect = 1.300e-96
Identity = 224/556 (40.29%), Postives = 286/556 (51.44%), Query Frame = 0
Query:   36 SELRTPQAVTSALIVKGALANVLGFPIGSTT--IGTHYSEGHRVRLTVQIGKAPDPTEAQFIKVAETINALLAANQPVHVLK-LPRSQAEETYKKAMYNRHAVPESVTELTIAYIEGLAFSCTGEAVVASTGLVGSITINKTKFRSAKKELEVQYTVE------EAVKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQVVTPWEVEG-DQEIDYDRLIKSFGSMRITEDVVSRIERLTGVKCHRFLRRGLFFSHRDLTQLLDMYEKGTKFYLYTGRGPSSESLHLGHLIPFHFTRWLQAAFDVPLVIQLTDDEKFQFKQGLTLEECHRLAYENAKDIIACGFN----------------------------------------------------------------------------------DAYFRMTRDVAPRLGYKKPSLIHSKFFPGLEGKGGKMSASAESSAIYVTDTAKKIKQKIGR-AFSGGQETADLQKELGADLEVDVAYQYLTFFLEDDEELLRLGGSTKRG 499
            S  R+P    +  ++KGA+  VL  P G TT  +  H   G   +LT+   K  +PTE Q   +A  +   +  N P  V   +PR  AE  Y   MY+   VPESV EL + Y+E    +C    ++ STGL+G + +   K+ + K  LE+ +T+E      E  +                                                  Q VTPWEVEG D+ IDYD+LI+ FG   I + ++ R+E+LTG K HRFLRRGLFFSHRDL  LLD YE+G  FYLYTGRGPSSESLHLGHL+PF FT+WLQ  FDVPLVIQLTDDEKF FK  L+LEE HRLAYENAKDIIACGF+                                                                                  D YFR+TRDVAPR+G  KP+LIHSKFFP L+G   KMS S  ++ I VTD+ K+IK KI +  FSGGQ++A+ Q++ GA+LEVDVAY+YL + +EDDE+  ++G     G
Sbjct:    2 SVTRSPAFDAALHVIKGAVCTVLRIPTGRTTERVSPHLGGG---KLTLNSIK-EEPTEEQKELIATNVYNKVEENAPFKVFTGVPRDLAERKYFDTMYDSFKVPESVKELRLVYLEQWNLNCNVHPIIKSTGLLGEVNLTHWKYSAKKATLEISFTLEPSCDVFEMAEEDGNVEDLPSLDIAVPYVPDGTITYHFKGVIVVTLAEQLDQNRVLGVSNCQKVTPWEVEGSDEGIDYDKLIRDFGCSPIDQKLIDRMEKLTGKKAHRFLRRGLFFSHRDLGILLDKYERGIPFYLYTGRGPSSESLHLGHLVPFQFTKWLQDTFDVPLVIQLTDDEKFFFKDYLSLEEAHRLAYENAKDIIACGFDMDKTFIFSDLDYMGTMYPNVCKIQKLVTYNQARGAFGFTGSDSVGKSSFCAIQASPSFSTTFPSIFGDRKDIMCLIPQAIDQDPYFRVTRDVAPRMGMLKPALIHSKFFPALQGHKTKMSGSVGNTTIMVTDSKKEIKNKIMKYCFSGGQDSAEEQRKYGANLEVDVAYEYLRYVMEDDEKFKQIGEDYSSG 553          
BLAST of NO17G00980 vs. NCBI_GenBank
Match: PFH32209.1 (tryptophanyl-tRNA synthetase (TrpRS2) [Besnoitia besnoiti])

HSP 1 Score: 329.3 bits (843), Expect = 2.000e-86
Identity = 213/576 (36.98%), Postives = 277/576 (48.09%), Query Frame = 0
Query:   36 SELRTPQAVTSALIVKGALANVLGFPIGSTTIGTHYSEGHRVRLTV-QIGKAPDPTEAQFIKVAETINALLAANQPVHVLKLPRSQAEETYKKAMYNRHAVPESVTELTIAYIEGLAFSCTGEAVVASTGLVGSITINKTKFRSAKKELEVQYTVEEAVKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQVVTPWEVEG-DQEIDYDRLIKSFGSMRITEDVVSRIERLTGVKCHRFLRRGLFFSHRDLTQLLDMYEK----------------------------GTKFYLYTGRGPSSESLHLGHLIPFHFTRWLQAAFDVPLVIQLTDDEKFQFKQGLTLEECHRLAYENAKDIIACGFN----------------------------------------------------------------------------------DAYFRMTRDVAPRLGYKKPSLIHSKFFPGLEGKGGKMSASAESSAIYVTDTAKKIKQKIGR-AFSGGQETADLQKELGADLEVDVAYQYLTFFLEDDEELLRLGGSTKRG 499
            S  RTP    +  IVKGA    LG   G TT    +S+ ++  LT+  I  +P  TE + ++     +  +  N P  VL +PR  A+  YK++  +   +P SV  + +  ++    +      + STGL+  I   +  F   KK+L +   V  AV                                                   Q VTPWEV+G D+ IDY++L+K FG   IT ++V+RIE+LTG + H  LRRG+FFSHRDL  LLD  EK                            G  FYLYTGRGPSSE+LH+GHLIPF FT++LQ  FDVPLVIQLTDDEKF FK+ LTLEE HRLA+ENAKDIIACGF+                                                                                  D YFRMTRDVAPRLG  KP+LIHS+F P L+G   KMS S E+S+I+V+DT ++IK K+ + AFSGGQ T   Q+E GA+LE+DV YQYLTF L DD+ L  +G   ++G
Sbjct:    2 SSSRTPFQDAALAIVKGAACVALGLKTGRTTQNVKFSKDYKAVLTLGPIEASPSATEVELLQT--LTSQKIEENAPFRVLTVPRDVADRLYKESYLDEFGIPASVKSVRLVILDEWNINANIHPTLKSTGLISDIKFERFMFIEEKKQLSISIQVVPAV--------AADAADLCAEEQNVNGEELPSLSQVLPPSGVEDEEAGSSEGSDQTVTPWEVQGSDEGIDYNKLLKKFGCSAITPELVARIEKLTGKRAHHLLRRGIFFSHRDLNLLLDALEKRQNAEKLQASKREDGSAGEAAKGDKESEGPAFYLYTGRGPSSEALHIGHLIPFMFTKYLQDTFDVPLVIQLTDDEKFLFKENLTLEETHRLAFENAKDIIACGFDPDKTFIFSDLSYIQHLYPIILEIQKKVTYNQVRGLFGFCESDNVGKSAFPAVQAAPSFPTAFPMIFGGKKNVRCLIPQAIDQDPYFRMTRDVAPRLGLLKPALIHSRFIPALQGFRTKMSGSVETSSIFVSDTPEQIKTKVNKYAFSGGQATEAEQREKGANLEIDVPYQYLTFLLPDDDLLEEVGRKYQKG 567          
BLAST of NO17G00980 vs. NCBI_GenBank
Match: XP_003881044.1 (tryptophanyl-tRNAsynthetase,related [Neospora caninum Liverpool] >CBZ51011.1 tryptophanyl-tRNAsynthetase,related [Neospora caninum Liverpool] >CEL68316.1 TPA: Tryptophanyl-tRNA synthetase, related [Neospora caninum Liverpool])

HSP 1 Score: 314.3 bits (804), Expect = 6.800e-82
Identity = 204/565 (36.11%), Postives = 266/565 (47.08%), Query Frame = 0
Query:   39 RTPQAVTSALIVKGALANVLGFPIGSTTIGTHYSEGHRVRLTV-QIGKAPDPTEAQFIKVAETINALLAANQPVHVLKLPRSQAEETYKKAMYNRHAVPESVTELTIAYIEGLAFSCTGEAVVASTGLVGSITINKTKFRSAKKELEVQYTVEEAVKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQVVTPWEVEGDQ-EIDYDRLIKSFGSMRITEDVVSRIERLTGVKCHRFLRRGLFFSHRDLTQLLDMYEK--------------------GTKFYLYTGRGPSSESLHLGHLIPFHFTRWLQAAFDVPLVIQLTDDEKFQFKQGLTLEECHRLAYENAKDIIACGFN----------------------------------------------------------------------------------DAYFRMTRDVAPRLGYKKPSLIHSKFFPGLEGKGGKMSASAESSAIYVTDTAKKIKQKIGR-AFSGGQETADLQKELGADLEVDVAYQYLTFFLEDDEELLRLGGSTKRG 499
            RTP    +  IVKGA    L    G TT    +S+ ++  +T+  +   P  +E + +K        +  N P  V  +PR  A   Y+++  +   +P +V E+ +  +     +      + STG +  I     KF + K++L +   V  A                                                    Q VTPW+V+ ++  IDYD+L+K FG   IT  ++SRIE LTG + H  LRRG+FFSHRDL  LLD  EK                    G  FYLYTGRGPSSE+LH+GHL+PF FT++LQ  FDVPLVIQLTDDEKF FK+ LTLEE HRLA+ENAKDIIACGF+                                                                                  D YFRMTRDVAPRLG  KP+LIHS+F P L+G   KMS S E+S+IYV+DT ++IK KI + AFSGGQ T   Q+E GA+LE+DV YQYLTF L DD+ L  +G    +G
Sbjct:    4 RTPYQDAALAIVKGAACIALSLKTGRTTRNVKFSKDNKCSITLGPVDNQPTASEEELLKT--LTQQKIEENCPFRVFTIPREVATRMYQESYLDEFGIPANVKEVRLVVLPEWNINANIYPTLKSTGQIAEIRFETVKFVAEKRQLCLTLQVVPA---------DNGDAPAVAVEEKVAPEDLPTLSQVLPPSGVEGDDLGNDGQDDQTVTPWDVQANEGGIDYDKLLKKFGCSAITPQLISRIEALTGKRAHHLLRRGIFFSHRDLNLLLDAIEKRQANLASEKREDGAGADAFSGPAFYLYTGRGPSSEALHIGHLVPFMFTKYLQDVFDVPLVIQLTDDEKFLFKENLTLEETHRLAFENAKDIIACGFDPDKTFIFSDLSYIQHLYPVILEIQKKVTYNQVRGLFGFVESDNIGKSAFPAVQAAPSFPTAFPMIFGGKKDVRCLIPQAIDQDPYFRMTRDVAPRLGLLKPALIHSRFIPALQGFKTKMSGSVETSSIYVSDTPEQIKNKINKYAFSGGQATESEQREKGANLEIDVPYQYLTFILPDDDLLKEIGEKYAKG 557          
BLAST of NO17G00980 vs. NCBI_GenBank
Match: XP_002785946.1 (IFP53, putative [Perkinsus marinus ATCC 50983] >EER17742.1 IFP53, putative [Perkinsus marinus ATCC 50983])

HSP 1 Score: 312.0 bits (798), Expect = 3.400e-81
Identity = 170/338 (50.30%), Postives = 203/338 (60.06%), Query Frame = 0
Query:  245 QVVTPWEVEG-DQEIDYDRLIKSFGSMRITEDVVSRIERLTGVKCHRFLRRGLFFSHRDLTQLLDMYEKGTKFYLYTGRGPSSESLHLGHLIPFHFTRWLQAAFDVPLVIQLTDDEKFQFKQGLTLEECHRLAYENAKDIIACGFN----------------------------------------------------------------------------------DAYFRMTRDVAPRLGYKKPSLIHSKFFPGLEGKGGKMSASAESSAIYVTDTAKKIKQKIGR-AFSGGQETADLQKELGADLEVDVAYQYLTFFLEDDEELLRLGGSTKRG 499
            Q VTPWEVEG D+ IDYD+LI+ FG   I + ++ R+E+LTG K HRFLRRGLFFSHRDL  LLD YE+G  FYLYTGRGPSSESLHLGHL+PF FT+WLQ  FDVPLVIQLTDDEKF FK  L+LEE HRLAYENAKDIIACGF+                                                                                  D YFR+TRDVAPR+G  KP+LIHSKFFP L+G   KMS S  ++ I VTD  K+IK KI +  FSGGQ++A+ Q++ GA+LEVDVAY+YL + +EDDE+  ++G     G
Sbjct:   54 QKVTPWEVEGSDEGIDYDKLIRDFGCSPIDQKLIDRMEKLTGKKAHRFLRRGLFFSHRDLGILLDKYERGIPFYLYTGRGPSSESLHLGHLVPFQFTKWLQDTFDVPLVIQLTDDEKFFFKDYLSLEEAHRLAYENAKDIIACGFDMDKTFIFSDLDYMGTMYPNVCKIQKLVTYNQARGAFGFTGSDSVAKSSFCAIQASPSFSTTFPSIFGDRKDIMCLIPQAIDQDPYFRVTRDVAPRMGMLKPALIHSKFFPALQGHKTKMSGSVGNTTIMVTDKPKEIKNKIMKYCFSGGQDSAEEQRKYGANLEVDVAYEYLRYIMEDDEKFEQIGEEYSSG 391          
BLAST of NO17G00980 vs. NCBI_GenBank
Match: KFH12174.1 (tryptophanyl-tRNA synthetase [Toxoplasma gondii MAS] >PUA90027.1 tryptophanyl-tRNA synthetase (TrpRS2) [Toxoplasma gondii TgCATBr9])

HSP 1 Score: 310.1 bits (793), Expect = 1.300e-80
Identity = 201/564 (35.64%), Postives = 264/564 (46.81%), Query Frame = 0
Query:   39 RTPQAVTSALIVKGALANVLGFPIGSTTIGTHYSEGHRVRLTVQIGKAPDPTEAQFIKVAETINALLAANQPVHVLKLPRSQAEETYKKAMYNRHAVPESVTELTIAYIEGLAFSCTGEAVVASTGLVGSITINKTKFRSAKKELEVQYTVEEAVKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQVVTPWEVE-GDQEIDYDRLIKSFGSMRITEDVVSRIERLTGVKCHRFLRRGLFFSHRDLTQLLDMYEK--------------------GTKFYLYTGRGPSSESLHLGHLIPFHFTRWLQAAFDVPLVIQLTDDEKFQFKQGLTLEECHRLAYENAKDIIACGFN----------------------------------------------------------------------------------DAYFRMTRDVAPRLGYKKPSLIHSKFFPGLEGKGGKMSASAESSAIYVTDTAKKIKQKIGR-AFSGGQETADLQKELGADLEVDVAYQYLTFFLEDDEELLRLGGSTKRG 499
            RTP    +  IVKGA    L      TT    +S+ +R  +T+   +  +PT A+   +       +  N P  V  +PR  A   Y+++  +   +P +V E+ +  +     +     V+ STG +  I     KF   KK+L +   V                                                       Q +TPW+V+  +  IDY++L+K FG   IT D++SRIE LTG + H  LRRG+FFSHRDL  LLD  EK                    G  FYLYTGRGPSSE+LH+GHL+PF FT++LQ  FDVPLVIQLTDDEKF FK  LTLEE HRLA+ENAKDIIACGF+                                                                                  D YFRMTRDVAPRLG  KP+LIHS+F P L+G   KMS S E+S+IYV+DT ++IK KI + AFSGGQ T   Q+  GADL++D+ +QYLTF L DD++L  +G   ++G
Sbjct:   87 RTPFQDAALSIVKGAACIALSLKTARTTQNVKFSKDNRCSITLGPIEV-EPTAAEEALLKTLTKQKIEENCPFRVFTIPRDLATRMYQESYLDEFGIPANVKEVRLVVLPEWNINANMYPVLKSTGQIADIQFESVKFNEEKKQLCLSLHV----------VPGPDEQSPALAEEEKLGPEEIPSRAQVLPPSGVEGDDFGEGDDDQTITPWDVQAAEGGIDYNKLLKKFGCSSITPDLISRIEALTGKRAHHLLRRGIFFSHRDLNLLLDSLEKRQARLASGKREDGPGSEGLSGPGFYLYTGRGPSSEALHIGHLVPFMFTKYLQDVFDVPLVIQLTDDEKFLFKDSLTLEETHRLAFENAKDIIACGFDPDKTFIFSDLSYIQHLYPVILEIQKKVTYNQVRGLFGFVESDNVGKSAFPAVQAAPSFPTAFPMIFGGKKDVRCLIPQAIDQDPYFRMTRDVAPRLGLLKPALIHSRFIPALQGFKTKMSGSVETSSIYVSDTPEQIKNKINKYAFSGGQATEAEQRVKGADLDIDIPFQYLTFILNDDDQLKEIGEKYQKG 639          
The following BLAST results are available for this feature:
BLAST of NO17G00980 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM21129.11.900e-15364.79tryptophanyl-trna cytoplasmic [Nannochloropsis gad... [more]
CBN78295.18.100e-12847.61Tryptophan--tRNA ligase [Ectocarpus siliculosus][more]
CEM21761.11.600e-9944.50unnamed protein product [Vitrella brassicaformis C... [more]
XP_002787529.17.400e-9740.92IFP53, putative [Perkinsus marinus ATCC 50983] >EE... [more]
XP_002766059.11.300e-9640.73IFP53, putative [Perkinsus marinus ATCC 50983] >EE... [more]
XP_002783213.11.300e-9640.29IFP53, putative [Perkinsus marinus ATCC 50983] >EE... [more]
PFH32209.12.000e-8636.98tryptophanyl-tRNA synthetase (TrpRS2) [Besnoitia b... [more]
XP_003881044.16.800e-8236.11tryptophanyl-tRNAsynthetase,related [Neospora cani... [more]
XP_002785946.13.400e-8150.30IFP53, putative [Perkinsus marinus ATCC 50983] >EE... [more]
KFH12174.11.300e-8035.64tryptophanyl-tRNA synthetase [Toxoplasma gondii MA... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL158nonsL158Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL156nonsL156Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR035ncniR035Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR085ngnoR085Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR084ngnoR084Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR028ngnoR028Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO17G00980.1NO17G00980.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO17G00980.1NO17G00980.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO17G00980 ID=NO17G00980|Name=NO17G00980|organism=Nannochloropsis oceanica|type=gene|length=2529bp
ATGCATCACGATATTTCTATGTGCAATGGCAAGGGTTACCTAGTGATGCT
GAAGCGgtcagggtcatgccctccgtaaaacggagaccgtccacatgcag
tcctttcctaccgcacatgtatcatcatcgccatccgcatgacccgcccc
gccccgtctctcaattctcgataattcttctgtatgcaaacataaataca
gGGTAGCAGCAGCACCAGCAACAACAGCTGCAGCAAATATGGCGACGCCC
TCCGAGTTGCGGACTCCGCAGGCCGTCACCAGCGCCCTAATTGTCAAGgt
taaaaaaaaatactgtcccccttccccatccatagacctccccacccctc
cttccccctcacgccctcccaccgactatccacgcacatagGGTGCACTT
GCCAACGTTCTGGGATTTCCCATCGGCAGCACTACCATCGGAACGCATTA
TTCGGAGGGCCACCGCGTGCGCCTGACAGTCCAAATCGGCAAAGCCCCCG
ATCCGACCGAAGCCCAATTCATCAAGGTCGCCGAGACGATCAACGCTCTT
CTCGCCGCCAATCAGCCCGTGCACGTCCTCAAGCTACCCCGAAGCCAAGC
GGAAGAGACCTACAAAAAAGCCATGTACAATCGGCATGCCGTTCCTGAGA
GCGTGACCGAGCTGACCATCGCGTATATCGAAGGCCTCGCATTTTCGTGC
ACGGGCGAGGCTGTGGTAGCTAGTACGGGCCTTGTGGGCAGTATAACCAT
CAACAAGACCAAATTTCGTTCAGCCAAGAAGGAATTGGAGGTTCAGTACA
CAGTAGAGGAAGCAGTGAAAGGGTCGGTGGCGGTGGCCGAGGCGAATGGC
GTGGCTCTTCCCACGTCTGAAGCAATTGCGGTTTTGAATAGCGATTCTGT
CCGTGTTGCTGCGGACGGTCCTGTAGAAGGAGGGAACGGTGGAGGGGCTG
AGGGAGATGGGGCAGGGGGGCAAGTGGTGACCCCGTGGGAGGTGGAGGGC
GACCAGGAGATAGATTATGATAGATTGATTAAAAGCTTCGGGAGCATGCG
CATTACAGAGGATGTCGTCTCGCGGATTGAGCGGCTTACGGGAGTAAAGT
GCCACCGATTCCTGCGCAGGGGGTTATTTTTTTCTCATCGGGATTTGACT
CAATTGTTGGATATGTACGAAAAGGGGACGAAGTTTTACCTGTACACGGG
CCGTGGGCCGAGTTCTGAGAGTCTGCACCTGGGGCATTTGATTCCGTTTC
ACTTCACCAGGTGGCTGCAGGCGGCGTTCGACGTCCCCCTGGTGATCCAA
TTAACAGATGACGAGAAATTCCAGgtaccttgatagaaccctcccttcct
ccctccttccctcccttcactcctcctttaaccctcttagaaactgaccc
cgataacatcggcccctaaaccttccctccccctccctccctcctatcct
tcattcttactttcactgtcacagTTCAAGCAGGGCCTGACTCTAGAGGA
ATGTCACCGTCTGGCCTATGAAAACGCGAAGGACATTATCGCATGCGGCT
TCAACgtaaaaaaaaccttcatcttctccgaccttgattacatcgggcat
ttgtacccgacggttttaaaaaattcaaaaattggtcaccttcaatcaag
cccgtgggatctttggcttcactgaatcagattcttgcgggaagatagcc
tttcccgctgtgcaggctgcaccgagctttgtttcgagtttccctgtggt
gctgggaaggggaggaagggagggaaggggggagggaaggaggacatggc
gtgtttgattccgtgtgcgatcgaccagGATGCGTATTTCCGCATGACGA
GAGATGTGGCCCCACGATTAGGGTACAAAAAGCCGTCGTTGATTCACTCC
AAGTTTTTCCCGGGACTGGAGgtatgaaaagggggggagagaggaaggga
gggaggcaggatggcccggtgagaacgaaacgcacgcgatgggcttctct
cgcttctcactgttcttgattttacgtaaaccattagcattcagaaacac
gtacttacaaccccaccccccccccctactttcccttccttccatttggg
cctccttccctttagGGAAAAGGAGGCAAAATGTCTGCCTCTGCCGAGTC
AAGCGCCATCTACGTCACTGACACGGCCAAGAAAATCAAGCAAAAAATTG
GTCGTGCTTTCTCCGGAGGGCAAGAAACTGCAGACTTACAGAAGGAGTTA
GGAGCCGATTTGGAGGTGGACGTTGCGTATCAATATTTGACTTTTTTCCT
CGAAGATGACGAGGAGTTGCTGAGATTGGGAGGGAGTACAAAGCGGGGAG
GATGATGACGGGTCAGGTGAAAGGGCGGTTGATTGAGTTGCTCGGGGGAA
TGGTGGGTGAACATCAGGAGAGGAGGGCGGCAGTAACGGATGATATGCTG
GCGGAGTTCATGCGAGTGCGGGAGTTGGAGTTTTAGGGTGAGAGGGGGCC
AAAATGGAGGGAAGAATATACTCAGGGCC
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protein sequence of NO17G00980.1

>NO17G00980.1-protein ID=NO17G00980.1-protein|Name=NO17G00980.1|organism=Nannochloropsis oceanica|type=polypeptide|length=500bp
MHHDISMCNGKGYLVMLKRVAAAPATTAAANMATPSELRTPQAVTSALIV
KGALANVLGFPIGSTTIGTHYSEGHRVRLTVQIGKAPDPTEAQFIKVAET
INALLAANQPVHVLKLPRSQAEETYKKAMYNRHAVPESVTELTIAYIEGL
AFSCTGEAVVASTGLVGSITINKTKFRSAKKELEVQYTVEEAVKGSVAVA
EANGVALPTSEAIAVLNSDSVRVAADGPVEGGNGGGAEGDGAGGQVVTPW
EVEGDQEIDYDRLIKSFGSMRITEDVVSRIERLTGVKCHRFLRRGLFFSH
RDLTQLLDMYEKGTKFYLYTGRGPSSESLHLGHLIPFHFTRWLQAAFDVP
LVIQLTDDEKFQFKQGLTLEECHRLAYENAKDIIACGFNDAYFRMTRDVA
PRLGYKKPSLIHSKFFPGLEGKGGKMSASAESSAIYVTDTAKKIKQKIGR
AFSGGQETADLQKELGADLEVDVAYQYLTFFLEDDEELLRLGGSTKRGG*
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Synonyms
Publications