NO17G00880, NO17G00880 (gene) Nannochloropsis oceanica

Overview
NameNO17G00880
Unique NameNO17G00880
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length6116
Alignment locationchr17:287499..293614 +

Link to JBrowse

Properties
Property NameValue
DescriptionIncenp-like protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr17genomechr17:287499..293614 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:1902412regulation of mitotic cytokinesis
GO:0000070mitotic sister chromatid segregation
Homology
BLAST of NO17G00880 vs. NCBI_GenBank
Match: EWM21134.1 (incenp-like protein [Nannochloropsis gaditana])

HSP 1 Score: 181.8 bits (460), Expect = 5.200e-42
Identity = 190/406 (46.80%), Postives = 226/406 (55.67%), Query Frame = 0
Query:    9 PFTPPSPIKEGKDLWHITRKLEGRGSEGKEALDSLHDNALVYMQSCFNTAKRRLAKDHSPCKDS-LRPGISAPQNTPNPSAASGNSSSTKKQRRSVVEAGKAAHVKQKVALFENLKG------QHVGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVFPGLNLGDASTM--TMARNFIITIPRISEEAEDEMVALGEFSHEEGE--EGDEVGEGKRMNQGVGTTTTARVLDMNDDEQFLPPSYGQWEGRQQKGKAGAAVXXXXXXXXXXXGLVTSTQ-----QITLALKDLRLNG-PSSDALQQQELQQDQPNGFKADVRVGGEENNQAAAGPAPIIECNRKLAIPCSHPQQQQQDIADSSCGSSSGPVGVLLGVFQKTLGLGKHHQRGSVPPVSPSS 398
            P TP SP KEG+ LW IT KLEGR SEGKEALDSLHDNA+ YM+SCFNTAKRRL +D S C+ S  R G +AP+NT  P++A+G+  S KKQRRSV EA + A VK KVALFE+ +            XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   AVFPGLNLG+  T+  T AR+F I++ RI EEAEDE    GE +  EG    G     GK     +  + T R        Q L PS G       K    A             G  T  Q      IT A+K L+L   P S +++  +         K  +  GGE       GPAPIIECN        HP +  +    S C S +G VG  LG+ QKTLGL    Q  ++PP   S+
Sbjct:   10 PATPASPFKEGRALWSITGKLEGRTSEGKEALDSLHDNAMEYMRSCFNTAKRRLTEDSSLCERSPQRKGTTAPENT--PTSATGSDWSIKKQRRSVAEAEQMALVKAKVALFESYRSATTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSYHAVFPGLNLGETMTLASTSARSFQISVSRIPEEAEDE--GAGEETSREGRGAAGATFNAGKPFRGALRESPTLR--------QSLQPSLGLPAHHAPKTLEAA---RGGPGPGGAGGRTTPDQPLTAHHITRAMKGLQLTEIPESSSIEPGK------GSDKGKLGEGGEGGGLIETGPAPIIECNGSGV----HPLEGTRPA--SHCSSGAGGVGGFLGIVQKTLGLS--WQCAALPPTHTSA 386          
The following BLAST results are available for this feature:
BLAST of NO17G00880 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 1
Match NameE-valueIdentityDescription
EWM21134.15.200e-4246.80incenp-like protein [Nannochloropsis gaditana][more]
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL158nonsL158Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL156nonsL156Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR035ncniR035Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR085ngnoR085Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR084ngnoR084Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR028ngnoR028Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO17G00880.1NO17G00880.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
Naga_100041g4gene9286Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO17G00880.1NO17G00880.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO17G00880 ID=NO17G00880|Name=NO17G00880|organism=Nannochloropsis oceanica|type=gene|length=6116bp
ATGCATAGACGAAGGCTTTTAGTTTTTCTTCTTGGTTGATGAGCATAGTC
ATCGATCTGCTCAAGGTCTCGGTGCACGTGGGCTCTAGTTTTCCCTCTCC
CCTCCCTCTTTCGCATTTCCCTGTTTCCTTCCTTGCTCCCTCTACATGTG
TCATGGCTTTTCCTTGCCTTCTTGCTTGGGGCTGGCGTGCAAATACAGGG
GGGGGGGGGGCAAAGACAGCAATGGAGTTGTGTGAGAGGTCGAGTGCTTT
GACTGCGGCATATCATCAGCGCATGAAAGCGTTCCACTACTCTTCCCTTC
GTATCCTTATTTGTTCGGCAGAACATATCTTATTTCTTATTCGCTTTCTC
ATTGCCTCTCTATTTCTTTCACTTTCCCGCCATTTACCCAAAGTTTCCTG
TGCGTGCAGACCGTCATAGGTCTCCCACACATACACAGGTACACACACCT
TCTCTCTGTTTCAGATCCACGTGGCTGACTATGTATTAACTTCATCGTTA
AATTGTGTTTTCTCTTTTCCATTCCTATGGGACGTTTTTTACACAAGATC
GGCTCCTCCTAGTGGACCGCCTCTCCCTCCTCCTCCTCCTCCTCCACCAG
ATCCTTCCTCTCCTAGATTTCTTCTTGCTGCCGCTGCTGCAGCTGCTGCT
GACGGGGAGGAAGAAGGATGTGGTGATTGCTCTTGCCTTCGCCTTGGCGA
GGCCGACGAAGGCAGGGAGGATGAGAACGAGGGCGAGGACGAGGACGGGA
GGGAGGAGGCAACAGGTTGCTGCATCTCGACAAGGGACATGTCGTGGTAC
GGAATCAAGCTGTCAGGTGGCTGGTACGAACCCGTCGCATGACCACTCTC
TCCTTCAGCGGCAGCAGCGGCAGCACCAGGGATCGCGCCGACAGCAGCAA
TAGAAATAGGCGCGGAGGACGAGGAGGGGAAGGACGAGGTGGGGAGGACG
GGCGCGGTGGAGCTGTCTGTCATGCTGGCCGTGCTGCTGTTGCGGTGGTC
AGCACCAGGAGTACTCGTAGTGGTCGAAGAGGAAACACGGTGTTGTATCC
TTGATTCTCGGAACGGATTAAGGCTTGACAGGAGAGAAGAGAACGCGTGA
GCGGTGGTACTAGTAGTGGTAGCACCCGTAGTGGCGGTAGAAGAGGGGTA
TAAGCCCGTGATTGACGAGGTGGAGGAGGAGGGGGAAGTGATGAGCGAGG
GAGAGGGAGGAGCGGTGACCCGGGCCTTGCACATGGGGCACGAGAGGCTG
CTGGCAGACCGGAACCATTGATCGACGCATTGCACGTGGAAACGATGCCC
GCACGGCAGCTCCCTCAACATCTCCTCCTCCACATAGTCCATCAAACAGA
TGGCGCACATGTCTCTGTTGTCGTCCGCTGGTGTTGACTCTCTGCCCCTT
TCCGCCCTTCCTCCCTCCATTGATGCCGGTCCACTATCCACCCCTCCTCC
TCTTTCTCCTCCAGCCCCTGCCACTGCTCCTGCTCCTGCTCCTCCATACT
CTCCACCGGCGCTACCATCACTCCTTCCATACTGCACAACCGGCAACGAC
CTCAGGGCCTCTTCCGTCACTCTTGCCCTCTCCTCCCTCCCCCTCGCCTC
CGCCTGCCCCATCCCTCCCTCGCCCACTGCCTCCCCCGCCGCCCCTCGTG
CCCTCAGCAACATCTGTCTTCTCATTCTCAACGACAAGAATGCTGAGCAC
ATACACATAAGTACCAAGCTCGACAAAATGAACATCATCCGTCCTGCAAA
AAGGGCGTTCAGCCCCTCCGCCGGCGCCTTGGTCAACTGCCCTTCCTCCA
TCCCTCCGGCATCGATCATCCAGACGTCGGCCACATCATTCACATCCTGA
TAACTGCCCCCGTAGAACACTAGCACACCCCCCTCATTACTCCCCTCCTT
TCTCCAGACAACTCCACGATGGTCGAATCTCGGGGCAGGCGCAGGCTTGC
CGTTTGGATTCACGAATTTCTGCCAGAACGGTTTCCTGGGATCCCAGACT
AACAAATCGTTGTAGACAACAGCCAGACCTGCCGAGGTGTAAATTACATA
TCCCGCAAATGCATACAAAACCTGAACACTAGTTGGAGGAGCAGCAGGGC
CGGCCGCCGCACCGTCAGCAGCAGCGGCGGCAGGAACAGCTAGAGGAGCT
TTGAGCATGGGTAGGGCGCTCCTTAGCAGGGCCACCTCCATCTTCTGCTG
CCTCCACGTCCGGTCTTTGATTGAAAACTCCCACACATCATCGAGCGCAA
ATAGCGAGTTCCCGAAAAACGTCAATCCCCCAAACACCACAATCTTCGCC
ACTTCCTCCCCCCCTTCCTCCTCAATCAATACCGACGATGCGTGCAGAAA
CCTCGCCGGTGGCCCTCCATCTTTCTCCCCTCCAGCATATAATAATGTCC
ACACCATCGTCTCCAAATCTAAGCTCCACATATCACCATAAACCTCCCTG
GCCATCTGACCCCCACTCCCTTTGCTGCGGCTGCTGCGGCTGCTTGTACT
ATTACTGCCAGCAGCGACTGCCACGCCTGATGGCTCTACCAACCTACCAC
CATAGACCAGGAAGTGTTCTTTGCCCGTTGCTGGGTTTTTGAACAGTATC
CCCGTGTGATCACTCCTTCCTACAGGCCCTGCAGAAAAGGCCGGGTCGGC
CGTTTCGGCGCTTGTCGTCGCTACCGGTATCCAATGCCCGCCCTCTTTCC
AGTCTTCTCCCCCCCCTTCCATCGGAGCTGCCATCACAAATTTCAGTAGC
TGGTTCGTTGCTTTCGTTGTTCCTAGCGCTGAGTCCCCCTCCGGCATCTC
TCGTCCCCCCCATACATATAGGCCCAATGTCGGAGCTTCCCCTTCCCCCG
CCCCTGCCTCCTCCCGGGCGAAAAATGAATGCGCTGCTCTGTAGTAAACT
GGATCGGCAGGTGTGACTTTCTGCGATACATTCTGCCAGACATGTGTGGT
CAAGTCAAATGCCCACAGATCGCTGAGGCCGACCCTGTTTGCGCCTACGC
CACCGTGGACCAGCATGGTGTCTTTCCACACTGTCATCCCGTGTGATTGC
CTATTCGGGGGCGCGGGCGTACTGGTATTGGTGCCCGGATTGGGGGAGGG
AGCAGCCCATAGTTTTTGCCATTCGGCCAAGCCGGAGGTCGGGAGGGGGT
TGGAGGCGAGGAAGAGGAGAAGGAGGAGGGGGAGGTGGCAGGGGGAAGGG
ATAGAGGCCCGCCTGTTGACGGGGGGGCTGCGGTGTTCCTGCCGCATTGA
TGGTGCGTGACGGGCTGGTTGACTGCTGGTTAAAAAATGGGGAGAGATTA
TGATCTCGAAGTCGACCCCATGGCTGCTGCCGCCGGCTGTCTTGTTTAGG
TGCTTTCGCCTGTTGTGAAATATGGGGATTGTCAGAAAGTGCTGATGATT
CAAGGAGTGTAGGCCTGGGAGGCAATCGACGAAAAGCAGCAAGGGCACCG
GGAAAAAGAGGGATCTCATTCGTGACACCATGTACATGGCGAAGAGAGGC
ATGGCTGAAACAAAGTCGTCCACGTCCTGTTCAAGGAGCATGACCGCCCG
TGTGCGCACATTGTTATTTGAGGAGAAGGCGAAGGGGATGCACTCCAGCT
GTTCGCTATCAGGACGGTGATGATGATGAGTCGATCCGTTACGTTTCCCA
GCCCATTTCATAATCATTCCACCACCTCTCCATTTACGAAGCACTTCACA
CGCAGACATCACCACCACAGGTCAATATGGCCAGTAGCGGTCGTCCTCCA
CCATTCACTCCGCCCTCACCCATTAAGGAAGGCAAGGACTTGTGGCATAT
CACCCGCAAACTGGAAGGCCGGGGCAGCGAGGGCAAGGAGGCTTTAGACT
CCTTGCACGATAACGCCCTGGTGTACATGCAATCCTGTTTCAACACGGCC
AAGCGACGgtacgcgatgtgtaaagaggttgtgggggggaaatggtcttg
aaagtgagaaaaagggacgaggaatccttcccgtctagcttggtgaccac
actcacgtatctgcagatgacgcctaccatgagccccgccatttcggata
ctttcttatgctttgacaatcacctacctcaactacagCCTGGCTAAAGA
CCACAGTCCCTGTAAGGACAGTCTGCGTCCCGGAATCAGCGCTCCTCAAA
ACACCCCCAACCCTTCCGCCGCCTCCGGCAACTCTAGCAGCACAAAGAAG
CAACGCCGGTCCGTTGTAGAAGCGGGAAAAGCGGCTCACGTGAAGCAAAA
GGTTGCGCTGTTTGAGAACTTAAAAGGCCAGCATGTAGGTAGTAACAGCA
GCAGTAGCACAAGCAGCATCACAACTATTGCCACCACCACGACTACTAGC
ACAACAAGTAACAGCAGCAGCAGCAGCAGTAGCAGCAGTAGCTACCACGC
CGTTTTTCCTGGCCTCAATCTTGGCGACGCATCAACAATGACAATGGCGC
GCAACTTCATCATAACTATCCCTCGTATTTCCGAGGAGGCGGAAGATGAG
ATGGTTGCCTTGGGTGAGTTTTCCCATGAGGAGGGAGAGGAGGGGGACGA
AGTGGGGGAAGGGAAAAGGATGAACCAGGGCGTGGGAACGACAACGACGG
CACGGGTGTTGGATATGAATGACGATGAGCAATTTCTGCCCCCATCCTAC
GGACAATGGGAGGGCCGACAGCAGAAAGGTAAAGCAGGAGCAGCAGTAGA
AGCTGCGGCAGCAGCAGCACCGTCAGCAGCCGGCCTCGTCACTTCCACCC
AGCAAATTACCTTGGCACTGAAAGATCTTCGACTCAATGGCCCCTCCTCC
GATGCTTTACAGCAGCAAGAGTTACAGCAAGATCAACCCAATGGTTTCAA
GGCGGACGTGCGCGTGGGAGGGGAAGAGAACAACCAAGCAGCTGCAGGCC
CGGCGCCTATAATTGAATGCAACCGTAAGCTCGCTATTCCTTGTTCTCAC
CCTCAGCAACAGCAGCAGGATATTGCTGACAGCAGCTGTGGCAGCAGCAG
TGGTCCAGTTGGTGTGCTTTTAGGCGTCTTTCAGAAGACGCTTGGGTTGG
GGAAGCACCACCAGCGTGGGAGCGTTCCCCCCGTCAGTCCCTCCTCTTCT
TTGGTGGGAACAGCAGCAGCAGCAGCAGTGTCCATGGCAGCGCCCACGAT
GACTACGGATGCGTTGGATTCTTTGCCTCCGATTGACGCCGAGGATACGT
ACCTTATGTCGGAGAGTGATGAGGAAGGTCGCAGTGGAGGAGGAGGGGGG
GAGGAAAGGGATTCAGTGACAGCGAGGAGGAGGAGGAGGAGGAGCTTAAT
CGGAAGCGGCGGGCGACCAAAAAGgtgcgtatgagtcgtgggggggggca
gggggccataactggaggagaagtcggtacggactcatttccccttggtt
tttgcatggaatggtggagattgtggagtggaggcgctgttacggaatgc
agggggaaagcaatttggctatcttttatccaccgacaccctgctcctcg
tgctaccagtgccggttccgcttcagtgtacgagtaaatgatttgattct
tacgtgttcgttttctcatcatcttcaatctagATTCCCGAATGGGCCCG
TGGCGCCGCCTTGGCCGCTGCTTTGGAAAAGCAGTTCACCACTGATCCTG
AGCTGTGGGTAGATCCAGACACGATTTTCCCGGAAGTGACGTCCACCTGC
AATTTGGAGGAGATCTTCAAGGTCCGCAAGAAACGGTACTACAAGCGGAC
GAGCAGTGGAATGTGGGAGAATGATGGGTTGACCCTTGGGGAGAAGATGA
CATACAGAAGAGCGATGAAGGAGGAGAGTGATGCGGGGAGCAGCTCAAGG
GGAAAGTATTACCTTGGTTGTGGTGGTGGGAAAATGGGGATTAATTAGTT
TGAGGGTGAGAAGGAAGACGATGCTGGTTGAAGTAGGAGATGGAGAGCAG
GCGGATGAGAGTGGGGGCTTCTGGAAGAAAAAGAAAGCAGTTAAATGTGC
TCGCGCGTCACAGGTACGAAGAGGTAAAAATATATGGCGTTAAAGTGCGA
TCGATATTGGTATCATACAGCCCTGCCGATTTTCAAAGTCTTAAAAGTAT
TTTGTATTGATGGTCG
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protein sequence of NO17G00880.1

>NO17G00880.1-protein ID=NO17G00880.1-protein|Name=NO17G00880.1|organism=Nannochloropsis oceanica|type=polypeptide|length=499bp
MASSGRPPPFTPPSPIKEGKDLWHITRKLEGRGSEGKEALDSLHDNALVY
MQSCFNTAKRRLAKDHSPCKDSLRPGISAPQNTPNPSAASGNSSSTKKQR
RSVVEAGKAAHVKQKVALFENLKGQHVGSNSSSSTSSITTIATTTTTSTT
SNSSSSSSSSSSYHAVFPGLNLGDASTMTMARNFIITIPRISEEAEDEMV
ALGEFSHEEGEEGDEVGEGKRMNQGVGTTTTARVLDMNDDEQFLPPSYGQ
WEGRQQKGKAGAAVEAAAAAAPSAAGLVTSTQQITLALKDLRLNGPSSDA
LQQQELQQDQPNGFKADVRVGGEENNQAAAGPAPIIECNRKLAIPCSHPQ
QQQQDIADSSCGSSSGPVGVLLGVFQKTLGLGKHHQRGSVPPVSPSSSLV
GTAAAAAVSMAAPTMTTDALDSLPPIDAEDTYLMSESDEEGRSGGGGGEE
RDSVTARRRRRRSLIGSGGRPKRFPNGPVAPPWPLLWKSSSPLILSCG*
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Synonyms
Publications