NO17G00810, NO17G00810 (gene) Nannochloropsis oceanica

Overview
NameNO17G00810
Unique NameNO17G00810
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1341
Alignment locationchr17:270952..272292 +

Link to JBrowse

Properties
Property NameValue
Description26s proteasome non-atpase regulatory subunit 12
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr17genomechr17:270952..272292 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR036390WH_DNA-bd_sf
IPR035297PSMD12
IPR000717PCI_dom
Vocabulary: Cellular Component
TermDefinition
GO:0005622intracellular
Homology
BLAST of NO17G00810 vs. NCBI_GenBank
Match: EWM21148.1 (26s proteasome non-atpase regulatory subunit 12 [Nannochloropsis gaditana])

HSP 1 Score: 748.8 bits (1932), Expect = 9.600e-213
Identity = 386/446 (86.55%), Postives = 418/446 (93.72%), Query Frame = 0
Query:    1 MDGQLIQKKDCSAAVATALPEAKSLADAGKLAEAVELLLGIEKQARMGNDVTSLKEVVLQTVRLVREHNDWEQLNATLTQLSKRRSQNKAAITAMVQEAMGPSYVDAAPDADTKKKLITTLRDITDGKIFVEAERARLTRTLAALLEAEGKVGEACDIIQDVHVETYGSLDKEEKLDFILEQIRLTLAKKDFVRTYIIAKKVTKKLLDGEDPALQALKLKFYRLMIEYHSLAEKEAFEIAQHYHSIYNTPVVRAEETQWKEALSSCVLFLIIAPHSNQQSDMLHRLVSEEEDRLADLPVYKEILKTYTTKEIILYPLPQLPEIEVHPALNQYGPELAKHWLAQLRTRVIQHNIRVLSGYYKKIRLTRAAELLSLAVPELETNIATLVSEGSMYARVDRPANQVCFAPPKVAEEALSDWAADISELLHLVERTTHLISKEMMIHKVV 447
            MDGQLI+KKDCSAAVA ALPEAKSLADAGKLAEAVELLLG+EKQARMGNDVTSLKEVVL T+RLVRE  DWEQ+NATLTQ+SKRRSQNKAAI+AMVQEAMGPSY+DA PD +TK+KLI TLRDITDGKIFVE ERARLTRTL+ LLEAEGKV EACDIIQDVHVETYGSLDK+EKL+FILEQIRLTLAKKDF+RTYIIAKKVTKKLL+GEDPALQALKLKFYRLMIEYHSLAEKEAFEIAQHYHSIYNTPVVRAEE++W+ ALS+CVLFLIIAPHSNQQSDMLHRLV +EED+LA LPVYKEILKTYTT+EII YPLPQLP+IE HPAL  YG ELA+HWL QLRTRVIQHNIRVLS YYKKIRL+RAA+LLSL V ELE NI+TLVSEG++YAR+DRPANQV FAP K+AEE LSDWAADISELL LVERTTHLI+KE M+HKVV
Sbjct:    1 MDGQLIEKKDCSAAVAAALPEAKSLADAGKLAEAVELLLGVEKQARMGNDVTSLKEVVLATIRLVREKKDWEQMNATLTQISKRRSQNKAAISAMVQEAMGPSYLDATPDVETKRKLIVTLRDITDGKIFVETERARLTRTLSHLLEAEGKVAEACDIIQDVHVETYGSLDKQEKLEFILEQIRLTLAKKDFIRTYIIAKKVTKKLLEGEDPALQALKLKFYRLMIEYHSLAEKEAFEIAQHYHSIYNTPVVRAEESEWRAALSACVLFLIIAPHSNQQSDMLHRLVRQEEDQLAQLPVYKEILKTYTTREIIQYPLPQLPDIESHPALTLYGHELAQHWLQQLRTRVIQHNIRVLSAYYKKIRLSRAADLLSLDVSELENNISTLVSEGALYARIDRPANQVSFAPTKIAEETLSDWAADISELLRLVERTTHLINKEQMLHKVV 446          
BLAST of NO17G00810 vs. NCBI_GenBank
Match: CBN74209.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 382.9 bits (982), Expect = 1.400e-102
Identity = 212/447 (47.43%), Postives = 299/447 (66.89%), Query Frame = 0
Query:    1 MDGQLIQKKDCSAAVATALPEAKSLADAGKLAEAVELLLGIEKQARMGNDVTSLKEVVLQTVRLVREHNDWEQLNATLTQLSKRRSQNKAAITAMVQEAMGPSYVDAAPDADTKKKLITTLRDITDGKIFVEAERARLTRTLAALLEAEGKVGEACDIIQDVHVETYGSLDKEEKLDFILEQIRLTLAKKDFVRTYIIAKKVTKKLLDGEDPALQALKLKFYRLMIEYHSLAEKEAFEIAQHYHSIYNTPVVRAEE-TQWKEALSSCVLFLIIAPHSNQQSDMLHRLVSEEEDRLADLPVYKEILKTYTTKEIILYPLPQLPEIEVHPALNQYGPELAKHWLAQLRTRVIQHNIRVLSGYYKKIRLTRAAELLSLAVPELETNIATLVSEGSM-YARVDRPANQVCFAPPKVAEEALSDWAADISELLHLVERTTHLISKEMMIHKV 446
            M  +L ++KD +A V   LPEAK LA+     + +++++ +E+  R+GND  +LK                   N TLT +SKRR Q+  A+TAMVQEA+G  ++D  PD DT+  L+  LRDITDGKI+VEAERA+LTR LA + E +G V  A +++Q+VHVETYG+L K+EK DFILEQIRLTLAKKDFVR  I ++K+ +K+L  ED  +Q +K++FY+LMIEY +  EK  F++ Q +HSIY+TP VR +E  +WK+ L + VLFL+++P+ N Q DML R+   E  +L +LP YK ++K +TT EII YP+     +E  P L   GPEL   W   L+ R++QHNIR ++ YYK+I   R A+LL L   + E  +A +VS+GS+ YA++DRP   + F   K +EE LS+W +DI +LL LVER+ HLI+KE M+HK+
Sbjct:    1 MGDRLEERKDFTAEVTAKLPEAKKLAEXXXXXDGLDIIMSLERLCRVGNDFPNLKXXXXXXXXXXXXXXXXXXXNTTLTLISKRRGQHSKAVTAMVQEAVG--WLDETPDKDTRVLLLVALRDITDGKIYVEAERAKLTRMLAKIKEEDGDVAGAAEVLQEVHVETYGALTKKEKADFILEQIRLTLAKKDFVRALIQSRKINRKVLLDED--MQDIKVRFYKLMIEYDT-HEKATFDLCQDFHSIYDTPSVRDKEGEEWKQYLQAAVLFLVLSPNGNHQQDMLFRVA--EYKKLEELPAYKMLVKLFTTPEIIGYPVENQEALESDPCLAAGGPELLAKWKEDLKLRIVQHNIRTVASYYKQINTKRLADLLGLDENQAERKVADMVSDGSLAYAKIDRPKGIINFDKRKPSEEILSEWNSDIGQLLQLVERSCHLINKENMLHKI 440          
BLAST of NO17G00810 vs. NCBI_GenBank
Match: XP_002176845.1 (regulatory proteasome non-atpase subunit 5 [Phaeodactylum tricornutum CCAP 1055/1] >EEC51308.1 regulatory proteasome non-atpase subunit 5 [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 369.4 bits (947), Expect = 1.600e-98
Identity = 208/447 (46.53%), Postives = 295/447 (66.00%), Query Frame = 0
Query:    3 GQLIQKKDCSAAVATALPEAKSLADAGKLAEAVELLLGIEKQARMGNDVTSLKEVVLQTVRLVREHNDWEQLNATLTQLSKRRSQNKAAITAMVQEAM--------GPSYVDAAPDADTKKKLITTLRDITDGKIFVEAERARLTRTLAALLEAEGKVGEACDIIQDVHVETYGSLDKEEKLDFILEQIRLTLAKKDFVRTYIIAKKVTKKLLDGEDPALQALKLKFYRLMIEYHSLAEKEAFEIAQHYHSIYNTPVVRAEETQWKEALSSCVLFLIIAPHSNQQSDMLHRLVSEEEDRLADLPVYKEILKTYTTKEIILYPLPQLPEIEVHPALNQYGPELAKHWLAQLRTRVIQHNIRVLSGYYKKIRLTRAAELLSLAVPELETNIATLVSEGSMYARVDRPANQVCFAPPKVAEEALSDWAADISELLHLVERTTHLISKEMM 442
            GQL +K D S      + +A++L +AG+L EA+ LL  +EKQ R+GND  SL  V  ++++L R+  D + +  T+  L  RRSQ  +A+ A+VQ A+         P  V    +   + +L+  LRD+TDGK+F+E ERA+LTR LA + E +G + EA +++QDVHVETYGSL K++K++FILEQ+RLTLAKKDFVR  I+A KV+KK L  E+  ++  K++FY LM  YH   +K A ++A+ YH+IY TP + A+  +W+EAL + V+FL ++P+ N+Q DML+R+  EE   L  LP  K+ +     KEII YP+    E+E  P  ++ G +LA HW      R+IQHNIRV+S YYK+I   R A+LL L    +E  IA++VSEGS+YA++DRP + V F+ PK AE  LSDWA+DI +LL+LVE TTHLI KE M
Sbjct:   13 GQLQEKLDLSKETDAKIEQARTLVNAGQLPEALALLSALEKQCRVGNDNPSLVRVCEESLKLCRQVGDEDAMVDTIQSLVTRRSQKTSAVKALVQTALPWCVEEPFAPLPVSTDSEIAFRDRLVVVLRDVTDGKLFLERERAQLTRALATIKEQQGDISEAANVLQDVHVETYGSLSKKDKIEFILEQMRLTLAKKDFVRAAIVAGKVSKKNLAEEN--MKTYKVQFYTLMTIYHR-HDKNALDLARDYHAIYLTPHILADGVKWREALQATVVFLALSPYDNEQQDMLNRIALEE--NLEKLPACKKTIDLLLKKEIINYPMTHQAELEALPVCHEGGEDLAAHWHEVFHRRIIQHNIRVVSVYYKRIHGARLAQLLQLEPARVEKEIASMVSEGSIYAKIDRPKDIVRFSQPKTAEAVLSDWASDIDKLLNLVETTTHLIDKENM 454          
BLAST of NO17G00810 vs. NCBI_GenBank
Match: GAY00131.1 (26S proteasome non-ATPase regulatory subunit 12, putative [Pythium insidiosum])

HSP 1 Score: 367.9 bits (943), Expect = 4.600e-98
Identity = 204/445 (45.84%), Postives = 297/445 (66.74%), Query Frame = 0
Query:    1 MDGQLIQKKDCSAAVATALPEAKSLADAGKLAEAVELLLGIEKQARMGNDVTSLKEVVLQTVRLVREHNDWEQLNATLTQLSKRRSQNKAAITAMVQEAMGPSYVDAAPDADTKKKLITTLRDITDGKIFVEAERARLTRTLAALLEAEGKVGEACDIIQDVHVETYGSLDKEEKLDFILEQIRLTLAKKDFVRTYIIAKKVTKKLLDGEDPALQALKLKFYRLMIEYHSLAEKEAFEIAQHYHSIYNTPVVRAEETQWKEALSSCVLFLIIAPHSNQQSDMLHRLVSEEEDRLADLPVYKEILKTYTTKEIILYPLPQLPEIEVHPALNQYGPELAKHWLAQLRTRVIQHNIRVLSGYYKKIRLTRAAELLSLAVPELETNIATLVSEGSMYARVDRPANQVCFAPPKVAEEALSDWAADISELLHLVERTTHLISKEMMIHKV 446
            M  ++ +K D SA     LP+A+S+A +G +  A ELLLG+EK AR+ ND+ +LK VV   ++L  ++  WE L   ++ ++KRR+Q   A+T +VQ++M   ++   P    K  LI  LR + +GKIF+E ERA LT+ L+ + EA G++ EA  ++Q+VHVETYGS+ K EK ++ILEQ+RLTLAKKDFVR  I+AKK+ ++ L  E+ A Q  KLKFY+LMIEY +  E +  E+ +H+ +I+NT  V+  E  W++AL    +F+I++ +SN QSD+LH L  E+   L  +P +  +++ +TTKEII YPLPQ   ++ HP L    PE    WL  L +RV +HNIRV++ +Y++IR+   A ++ L+    E +I+TLVSEGS+YA++DRPA  V F  P   EE LS W+ADIS+LL LVE T HLI+KE MIHK+
Sbjct:  918 MSEEIGKKADFSAEYQRVLPQAQSIAASGNVEAACELLLGLEKSARLANDIPTLKLVVAAVLQLCAQYKRWELLKDHISLIAKRRAQKSGAVTVVVQKSM--EFLVETPSEAVKMDLINALRQVAEGKIFLEKERAVLTQMLSRMKEARGEIDEAATVLQEVHVETYGSMTKLEKAEYILEQVRLTLAKKDFVRANILAKKILRRTL--EEEAFQDCKLKFYQLMIEYDT-HENKLLELGRHWMAIFNTKKVKENEDMWRKALQHAAIFVILSSYSNLQSDLLHTLAREK--LLEKIPEFHSMVQKFTTKEIIGYPLPQDALLKKHPILTH--PERGAEWLKTLHSRVTEHNIRVVAEHYERIRVPHLANMIGLSEDLTEASISTLVSEGSIYAKIDRPAKIVSFVRPMSPEEQLSTWSADISDLLRLVETTCHLINKENMIHKI 1353          
BLAST of NO17G00810 vs. NCBI_GenBank
Match: GAY00129.1 (26S proteasome non-ATPase regulatory subunit 12, putative [Pythium insidiosum])

HSP 1 Score: 364.8 bits (935), Expect = 3.900e-97
Identity = 203/445 (45.62%), Postives = 294/445 (66.07%), Query Frame = 0
Query:    1 MDGQLIQKKDCSAAVATALPEAKSLADAGKLAEAVELLLGIEKQARMGNDVTSLKEVVLQTVRLVREHNDWEQLNATLTQLSKRRSQNKAAITAMVQEAMGPSYVDAAPDADTKKKLITTLRDITDGKIFVEAERARLTRTLAALLEAEGKVGEACDIIQDVHVETYGSLDKEEKLDFILEQIRLTLAKKDFVRTYIIAKKVTKKLLDGEDPALQALKLKFYRLMIEYHSLAEKEAFEIAQHYHSIYNTPVVRAEETQWKEALSSCVLFLIIAPHSNQQSDMLHRLVSEEEDRLADLPVYKEILKTYTTKEIILYPLPQLPEIEVHPALNQYGPELAKHWLAQLRTRVIQHNIRVLSGYYKKIRLTRAAELLSLAVPELETNIATLVSEGSMYARVDRPANQVCFAPPKVAEEALSDWAADISELLHLVERTTHLISKEMMIHKV 446
            M  ++ +K D SA     LP+A+S+A +G +  A ELLLG+EK AR+ ND+ +LK VV   ++L  ++  WE L   ++ ++KRR+Q   A+T +VQ++M   ++   P    K  LI  LR + +GKIF+E ERA LT+ L+ + EA G++ EA  ++Q+VHVETYGS+ K EK ++ILEQ+RLTLAKKDFVR  I+AKK+ ++ L  E+ A Q  KLKFY+LMIEY +  E    E+ +H+ +I+NT  V+  E  W++AL    +F+I++ +SN QSD+LH L    E  L  +P +  +++ +TTKEII YPLPQ   ++ HP      PE    WL  L +RV +HNIRV++ +Y++IR+   A ++ L+    E +I+TLVSEGS+YA++DRPA  V F  P   EE LS W+ADIS+LL LVE T HLI+KE MIHK+
Sbjct:    1 MSEEIGKKADFSAEYQRVLPQAQSIAASGNVEAACELLLGLEKSARLANDIPTLKLVVAAVLQLCAQYKRWELLKDHISLIAKRRAQKSGAVTVVVQKSM--EFLVETPSEAVKMDLINALRQVAEGKIFLEKERAVLTQMLSRMKEARGEIDEAATVLQEVHVETYGSMTKLEKAEYILEQVRLTLAKKDFVRANILAKKILRRTL--EEEAFQDCKLKFYQLMIEYDT-HENXLLELGRHWMAIFNTKKVKENEDMWRKALQHAAIFVILSSYSNLQSDLLHTLA--REXLLEKIPEFHSMVQKFTTKEIIGYPLPQDALLKKHPIFTH--PERGAEWLKTLHSRVTEHNIRVVAEHYERIRVPHLANMIGLSEDLTEASISTLVSEGSIYAKIDRPAKIVSFVRPMSPEEQLSTWSADISDLLRLVETTCHLINKENMIHKI 436          
BLAST of NO17G00810 vs. NCBI_GenBank
Match: OWZ22202.1 (26S proteasome non-ATPase regulatory protein [Phytophthora megakarya])

HSP 1 Score: 359.4 bits (921), Expect = 1.600e-95
Identity = 199/440 (45.23%), Postives = 292/440 (66.36%), Query Frame = 0
Query:    7 QKKDCSAAVATALPEAKSLADAGKLAEAVELLLGIEKQARMGNDVTSLKEVVLQTVRLVREHNDWEQLNATLTQLSKRRSQNKAAITAMVQEAMGPSYVDAAPDADTKKKLITTLRDITDGKIFVEAERARLTRTLAALLEAEGKVGEACDIIQDVHVETYGSLDKEEKLDFILEQIRLTLAKKDFVRTYIIAKKVTKKLLDGEDPALQALKLKFYRLMIEYHSLAEKEAFEIAQHYHSIYNTPVVRAEETQWKEALSSCVLFLIIAPHSNQQSDMLHRLVSEEEDRLAD-LPVYKEILKTYTTKEIILYPLPQLPEIEVHPALNQYGPELAKHWLAQLRTRVIQHNIRVLSGYYKKIRLTRAAELLSLAVPELETNIATLVSEGSMYARVDRPANQVCFAPPKVAEEALSDWAADISELLHLVERTTHLISKEMMIHKV 446
            +K D        LP+A+++A +G +  A E+LL +EKQAR+ NDV +LKE V   + L   H  WE L   +  L+KRR+Q   AIT +VQ AM   ++   P    K +LI  LR + +GKIF+E ERA LT+ L+ + EA G++ EA  I+Q+VHVETYG++ K EK ++ILEQ+RLTLAKKD+VR  I+AKK+ ++ L  E+   Q  KLKFY LMIEY +  E    E+ +H+ +I+NT +V+ +E  WK+AL    +F++++ +SN Q+D+LH+L S   D+LA+ +P +  +LK +TTKEII +P+ Q   ++ HP  N    E    W   L TRV++HNIR+++ +Y +IRL   A+++ L+    E++I+TLVS+GS+YA++DRPA  V F  P   EE LS+W+ADIS+LL LVE T HL++KE MIHK+
Sbjct:    8 KKADLGPEYQRVLPQAQAVAASGDVERACEMLLALEKQARLANDVATLKEAVGAILTLCALHKRWELLKDHVALLAKRRAQKSGAITVVVQRAM--EFLAETPSDAVKMELINALRTVAEGKIFLEKERATLTQMLSRMKEARGEIDEAATILQEVHVETYGAMTKLEKTEYILEQVRLTLAKKDYVRANILAKKILRRTL--EEDKFQECKLKFYHLMIEYDT-HENNTLELCRHWMAIFNTDMVKEKEEMWKKALEHATIFVVLSAYSNLQNDLLHKLAS---DKLAEKVPDFAAVLKKFTTKEIIAFPMEQDAVLKSHPIFNH--AERGAEWWKTLHTRVVEHNIRIVAEHYDRIRLPHLAKMIGLSEDLTESSISTLVSDGSIYAKIDRPAKLVSFHRPLSPEEQLSNWSADISQLLRLVETTCHLVNKENMIHKI 437          
BLAST of NO17G00810 vs. NCBI_GenBank
Match: ORY01231.1 (PCI-domain-containing protein [Basidiobolus meristosporus CBS 931.73])

HSP 1 Score: 358.2 bits (918), Expect = 3.600e-95
Identity = 202/442 (45.70%), Postives = 296/442 (66.97%), Query Frame = 0
Query:    8 KKDCSAAVATALPEAKSLADAGKLAEAVELLLGIEKQARMGNDVTSLKEVVLQTVRLVREHNDWEQLNATLTQLSKRRSQNKAAITAMVQEAMGPSYVDAAPDADTKKKLITTLRDITDGKIFVEAERARLTRTLAALLEAEGKVGEACDIIQDVHVETYGSLDKEEKLDFILEQIRLTLAKKDFVRTYIIAKKVTKKLLDGEDPALQALKLKFYRLMIEYHSLAEKEAFEIAQHYHSIYNTPVVRAEETQWKEALSSCVLFLIIAPHSNQQSDMLHRLVSEEEDRLADLPVYKEILKTYTTKEIILYPLPQLPEIEVHPALNQYG----PELAKHWLAQLRTRVIQHNIRVLSGYYKKIRLTRAAELLSLAVPELETNIATLVSEGSMYARVDRPANQVCFAPPKVAEEALSDWAADISELLHLVERTTHLISKEMMIHKV 446
            +KD S  V   LPEA+ LA +G+L +A+E LL +EKQ R   D+ S   ++   V++  E NDW+ LN  +  LSK+  Q K AIT MVQEAM  SY+D  PD  TK +LI TLR++T+GKI+VE E+ARLTR L+ + E EG V EA DI+Q++ VET+GS++K EK DFILEQ+RL LAKKDF+RT +I++K++ K  +  +P    LKL++Y LMI+Y +L E E   I ++Y  IY+T  ++ +E++WKE L + VLF++++P  N+QSD+++R+   E+  LA LP+YKE+LK++ T E++ +  P++ EI   PAL         E        L  RVI+HNIRV++ YY +I   R  +LL L+  E E  ++ LV   ++YAR+DRPA  + F+ PK   + L+DW+ D++ LL L+E+TTHLI+KE M+HK+
Sbjct:    2 EKDYSDVVDVQLPEAEQLAKSGELRKALEQLLSLEKQTRTAGDLASTTRILTGIVKICYESNDWKTLNEYVVLLSKKHGQLKQAITKMVQEAM--SYLDKTPDMPTKLELIDTLRNVTEGKIYVEIEKARLTRMLSKIKEDEGNVAEAADILQELQVETFGSMEKREKTDFILEQMRLCLAKKDFIRTQLISRKISTKFFN--EPEQADLKLRYYDLMIQY-ALHEGEYLNICKYYRQIYDTESIKKDESKWKEVLQNVVLFIVLSPFDNEQSDLINRIA--EDPNLAKLPLYKELLKSFITIELMRW--PRVEEI-YGPALKSTAVFSQKETGNDRWNDLHKRVIEHNIRVVAKYYTRITTKRLTQLLDLSDRETEEFLSKLVVSKTIYARIDRPAGIISFSAPKDPNQVLNDWSHDVNSLLGLIEKTTHLINKEEMVHKI 433          
BLAST of NO17G00810 vs. NCBI_GenBank
Match: XP_024586552.1 (26s proteasome non-atpase regulatory subunit [Plasmopara halstedii] >CEG50183.1 26s proteasome non-atpase regulatory subunit [Plasmopara halstedii])

HSP 1 Score: 356.3 bits (913), Expect = 1.400e-94
Identity = 196/439 (44.65%), Postives = 286/439 (65.15%), Query Frame = 0
Query:    7 QKKDCSAAVATALPEAKSLADAGKLAEAVELLLGIEKQARMGNDVTSLKEVVLQTVRLVREHNDWEQLNATLTQLSKRRSQNKAAITAMVQEAMGPSYVDAAPDADTKKKLITTLRDITDGKIFVEAERARLTRTLAALLEAEGKVGEACDIIQDVHVETYGSLDKEEKLDFILEQIRLTLAKKDFVRTYIIAKKVTKKLLDGEDPALQALKLKFYRLMIEYHSLAEKEAFEIAQHYHSIYNTPVVRAEETQWKEALSSCVLFLIIAPHSNQQSDMLHRLVSEEEDRLADLPVYKEILKTYTTKEIILYPLPQLPEIEVHPALNQYGPELAKHWLAQLRTRVIQHNIRVLSGYYKKIRLTRAAELLSLAVPELETNIATLVSEGSMYARVDRPANQVCFAPPKVAEEALSDWAADISELLHLVERTTHLISKEMMIHKV 446
            +K D        LPEA+++A +G +    E+LL +EKQAR+ NDV +LK VV   + L  +H  WE L   +  L+KRR+Q  +AIT +VQ AM    +   P    K +LI  LR + +GKIF+E ERA LT+ L+ + E  G++ EA  I+Q+VHVET+G++ K EK ++ILEQ+RLTLAKKD+VR  I+AKK+ ++ L+ +D   Q  KLKFY LMIEY +  E    E+ +H+ +IYNT +V+  E  WK+AL    +F++++ +SN Q+D+LH L  E+  R   +P +  +LK +TT+EII YP+ Q   ++ HP  N    E    W   L TR+++HNIRV++ +Y++IRL   A ++ L+    E +I+TLVS+GS+YA++DRPA  V F  P   EE LS+W+ADIS+LL LVE T HL++KE MIHK+
Sbjct:    9 KKADLGPEYQRVLPEAQAVAASGDVERGCEMLLVLEKQARLANDVATLKTVVDSILTLCAQHKRWEMLKDHVALLTKRRAQKSSAITVVVQRAM--ELLAETPSDAVKMELINALRTVAEGKIFLEKERATLTQMLSRMKEDRGEIDEAATILQEVHVETFGAMTKLEKTEYILEQVRLTLAKKDYVRANILAKKILRRTLEEKD--FQDCKLKFYHLMIEYDT-HENNTLELCRHWMAIYNTDIVKENEDMWKKALEHATIFVVLSAYSNLQNDLLHTLAKEK--RTEKVPDFAAVLKVFTTREIIAYPMEQDGVLKSHPIFNDV--ERGAEWWKTLHTRIVEHNIRVVAEHYERIRLPHLANMIGLSEDLTERSISTLVSDGSIYAKIDRPAKLVSFLRPLSPEEHLSNWSADISQLLRLVETTCHLVNKENMIHKI 438          
BLAST of NO17G00810 vs. NCBI_GenBank
Match: XP_002907277.1 (26S proteasome non-ATPase regulatory subunit 12, putative [Phytophthora infestans T30-4] >EEY63841.1 26S proteasome non-ATPase regulatory subunit 12, putative [Phytophthora infestans T30-4])

HSP 1 Score: 355.5 bits (911), Expect = 2.400e-94
Identity = 200/440 (45.45%), Postives = 289/440 (65.68%), Query Frame = 0
Query:    7 QKKDCSAAVATALPEAKSLADAGKLAEAVELLLGIEKQARMGNDVTSLKEVVLQTVRLVREHNDWEQLNATLTQLSKRRSQNKAAITAMVQEAMGPSYVDAAPDADTKKKLITTLRDITDGKIFVEAERARLTRTLAALLEAEGKVGEACDIIQDVHVETYGSLDKEEKLDFILEQIRLTLAKKDFVRTYIIAKKVTKKLLDGEDPALQALKLKFYRLMIEYHSLAEKEAFEIAQHYHSIYNTPVVRAEETQWKEALSSCVLFLIIAPHSNQQSDMLHRLVSEEEDRLAD-LPVYKEILKTYTTKEIILYPLPQLPEIEVHPALNQYGPELAKHWLAQLRTRVIQHNIRVLSGYYKKIRLTRAAELLSLAVPELETNIATLVSEGSMYARVDRPANQVCFAPPKVAEEALSDWAADISELLHLVERTTHLISKEMMIHKV 446
            +K D        LPEA+++A +G +  A E+LL +EKQAR+ NDV +LKE V   + L  +H  WE L   +  L+KRR+Q   AIT +VQ AM   ++   P    K +LI  LR + +GKIF+E ERA LT+ L+ + EA G++ EA  I+Q+VHVETYG++ K EK ++ILEQ+RLTLAKKD+VR  I+AKK+ ++ L  E+   Q  KLKFY LMIEY +  E    E+ +H+ +I+NT +V+ +E  WK+AL    +F++++ +SN Q D+L  L  E   +LA+ LP +  +LK +TT+EII +P+ Q   ++ HP  N    E    W   L TRV++HNIRV++ +Y +IRL   A+++ LA    E++I+TLVS+GS+YA++DRPA  V F  P   EE LS+W+ADIS+LL LVE T HL++KE MIHK+
Sbjct:    8 KKADLGPEFQRVLPEAQAVAASGDVERACEILLTLEKQARLANDVATLKEAVGSILTLCAQHKRWELLKDHVALLAKRRAQKSGAITVLVQRAM--EFLAETPSDAVKMELINALRTVAEGKIFLEKERATLTQMLSRMKEARGEIDEAATILQEVHVETYGAMTKLEKTEYILEQVRLTLAKKDYVRANILAKKILRRTL--EEKNFQECKLKFYHLMIEYDT-HENNTLELCRHWMAIFNTEMVKEKEEIWKKALEHATIFVVLSAYSNLQHDLLQNLARE---KLAEKLPDFAAVLKKFTTREIIAFPMEQDAVLKSHPIFNHV--ERGAEWWKSLHTRVVEHNIRVVAEHYDRIRLPHLAKMIGLAEDLTESSISTLVSDGSIYAKIDRPAKLVSFHRPLSPEEHLSNWSADISQLLRLVETTCHLVNKENMIHKI 437          
BLAST of NO17G00810 vs. NCBI_GenBank
Match: PIK57601.1 (putative 26S proteasome non-ATPase regulatory subunit 12-like isoform 1 [Apostichopus japonicus])

HSP 1 Score: 355.5 bits (911), Expect = 2.400e-94
Identity = 204/452 (45.13%), Postives = 299/452 (66.15%), Query Frame = 0
Query:    2 DGQLIQKK-DCSAAVATALPEAKSLADAGKLAEAVELLLGIEKQARMGNDVTSLKEVVLQTVRLVREHNDWEQLNATLTQLSKRRSQNKAAITAMVQEAMGPSYVDAAPDADTKKKLITTLRDITDGKIFVEAERARLTRTLAALLEAEGKVGEACDIIQDVHVETYGSLDKEEKLDFILEQIRLTLAKKDFVRTYIIAKKVTKKLLDGEDPALQALKLKFYRLMIEYHSLAEKEAFEIAQHYHSIYNTPVVRAEETQWKEALSSCVLFLIIAPHSNQQSDMLHRLVSEEEDRLADLPVYKEILKTYTTKEII-------LYPLPQLPEIEVHPALNQYGP-ELAKHWLAQLRTRVIQHNIRVLSGYYKKIRLTRAAELLSLAVPELETNIATLVSEGSMYARVDRPANQVCFAPPKVAEEALSDWAADISELLHLVERTTHLISKEMMIHK 445
            DG+L + + D S  V   +PE ++L   GKL+EAVE LL +EKQ RM  D+ S   V++  VRL  E  +WE LN  +  LSKRRSQ K A+  MVQEA   +Y+D  PD DTK KLI TLR +T GKI+VE ERARLT TLA + E +G+V EA  I+Q++ VET+GS++++EK++FILEQ+RL LAKKD++RT II+KK++ K  +     +QALKL+FY+LMIE     E    +I +HY +I++TP+ + +   WKEAL + VL+LI+AP+ N+QSD++HR+  E++  L ++ VYK++LK +TT E++       +Y        E +P    +   E  K     LR RV++HNIRV++ YY +I + R AELL L+  E E  ++TLV + +++A+VDR A  + F   +   E L+ W+ +++EL+ LV +TTHLI+KE M+H+
Sbjct:   21 DGRLQKMEVDYSETVDRRVPECEALVKDGKLSEAVESLLSLEKQTRMAADMQSTARVLVAIVRLCFEVKNWEALNENILVLSKRRSQLKQAVQKMVQEAY--TYLDKTPDLDTKLKLIDTLRTVTAGKIYVEIERARLTMTLAKIKENQGEVAEAATILQELQVETFGSMERKEKVEFILEQMRLCLAKKDYIRTQIISKKISLKFFESTAEEVQALKLRFYKLMIEIDE-HEGAYLDICKHYRAIFDTPITKEDSNSWKEALKNAVLYLILAPYDNEQSDLIHRVSLEKQ--LEEIQVYKDLLKNFTTVELMRWQQVCNIYEKELKEGSEGNPVTGVFSDLEKGKKRWVDLRNRVVEHNIRVMAKYYNRISMKRMAELLELSESEAEEFLSTLVVKKTVFAKVDRLAGIIDFTAHRDPNEVLNAWSNNLNELMQLVNKTTHLINKEEMLHQ 467          
The following BLAST results are available for this feature:
BLAST of NO17G00810 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM21148.19.600e-21386.5526s proteasome non-atpase regulatory subunit 12 [N... [more]
CBN74209.11.400e-10247.43conserved unknown protein [Ectocarpus siliculosus][more]
XP_002176845.11.600e-9846.53regulatory proteasome non-atpase subunit 5 [Phaeod... [more]
GAY00131.14.600e-9845.8426S proteasome non-ATPase regulatory subunit 12, p... [more]
GAY00129.13.900e-9745.6226S proteasome non-ATPase regulatory subunit 12, p... [more]
OWZ22202.11.600e-9545.2326S proteasome non-ATPase regulatory protein [Phyt... [more]
ORY01231.13.600e-9545.70PCI-domain-containing protein [Basidiobolus merist... [more]
XP_024586552.11.400e-9444.6526s proteasome non-atpase regulatory subunit [Plas... [more]
XP_002907277.12.400e-9445.4526S proteasome non-ATPase regulatory subunit 12, p... [more]
PIK57601.12.400e-9445.13putative 26S proteasome non-ATPase regulatory subu... [more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL158nonsL158Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR035ncniR035Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR084ngnoR084Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK004803NSK004803Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO17G00810.1NO17G00810.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|600088gene_7804Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100319g5gene9279Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO17G00810.1NO17G00810.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO17G00810 ID=NO17G00810|Name=NO17G00810|organism=Nannochloropsis oceanica|type=gene|length=1341bp
ATGGATGGGCAGCTAATCCAGAAGAAGGACTGCTCGGCTGCGGTGGCAAC
GGCGTTGCCGGAGGCCAAGTCGTTGGCGGACGCCGGCAAGCTGGCCGAGG
CTGTGGAGCTGCTGCTAGGCATTGAGAAGCAAGCGCGTATGGGCAATGAC
GTGACCAGTCTAAAGGAAGTGGTGCTGCAGACGGTGCGGCTGGTGCGGGA
GCATAATGATTGGGAACAGTTGAACGCGACATTGACGCAGCTGAGCAAGC
GGCGGTCGCAGAACAAGGCGGCCATCACTGCTATGGTACAAGAAGCAATG
GGACCTTCCTATGTGGATGCTGCCCCCGACGCCGACACCAAGAAGAAGCT
CATTACTACGTTGCGTGACATAACGGACGGCAAGATCTTCGTGGAAGCGG
AACGGGCGCGCTTGACTCGGACGTTGGCGGCCTTGCTTGAGGCAGAGGGG
AAAGTGGGGGAGGCGTGTGATATAATTCAGGATGTGCATGTGGAGACTTA
TGGGTCCTTGGACAAGGAGGAAAAGCTTGATTTTATCTTGGAACAGATTC
GACTGACGCTGGCTAAGAAGGATTTCGTCAGGACATATATTATTGCGAAG
AAGGTAACGAAGAAGCTTTTGGATGGGGAGGACCCTGCGTTGCAGGCACT
GAAGCTCAAGTTCTACCGATTGATGATAGAGTACCATTCGCTGGCGGAGA
AGGAGGCGTTTGAAATCGCCCAGCATTATCATTCCATTTATAACACGCCT
GTGGTGAGGGCGGAGGAGACCCAGTGGAAGGAGGCGTTGAGCAGCTGCGT
CTTGTTCTTGATAATCGCACCCCATTCGAACCAGCAGTCCGACATGCTGC
ACCGCCTCGTCTCCGAAGAAGAAGACCGCCTTGCCGATCTTCCCGTCTAC
AAAGAGATCCTTAAGACCTACACGACCAAAGAAATTATCCTTTACCCCTT
GCCGCAGCTCCCCGAGATTGAAGTCCACCCTGCTTTGAATCAGTACGGTC
CTGAGCTCGCCAAGCACTGGCTTGCCCAGTTGCGCACGCGTGTGATTCAA
CACAACATCCGGGTATTGTCTGGCTACTACAAGAAGATCCGTTTGACACG
CGCGGCGGAGTTGCTTTCGTTGGCCGTGCCGGAGTTGGAGACGAATATCG
CGACGCTCGTAAGTGAGGGCAGCATGTATGCCCGTGTGGATCGGCCGGCG
AATCAGGTGTGTTTTGCCCCGCCTAAGGTGGCAGAGGAAGCCTTGTCGGA
TTGGGCAGCGGATATTTCGGAATTGTTACACTTAGTGGAACGGACGACGC
ATTTGATTAGTAAGGAGATGATGATTCATAAGGTGGTTTAG
back to top

protein sequence of NO17G00810.1

>NO17G00810.1-protein ID=NO17G00810.1-protein|Name=NO17G00810.1|organism=Nannochloropsis oceanica|type=polypeptide|length=447bp
MDGQLIQKKDCSAAVATALPEAKSLADAGKLAEAVELLLGIEKQARMGND
VTSLKEVVLQTVRLVREHNDWEQLNATLTQLSKRRSQNKAAITAMVQEAM
GPSYVDAAPDADTKKKLITTLRDITDGKIFVEAERARLTRTLAALLEAEG
KVGEACDIIQDVHVETYGSLDKEEKLDFILEQIRLTLAKKDFVRTYIIAK
KVTKKLLDGEDPALQALKLKFYRLMIEYHSLAEKEAFEIAQHYHSIYNTP
VVRAEETQWKEALSSCVLFLIIAPHSNQQSDMLHRLVSEEEDRLADLPVY
KEILKTYTTKEIILYPLPQLPEIEVHPALNQYGPELAKHWLAQLRTRVIQ
HNIRVLSGYYKKIRLTRAAELLSLAVPELETNIATLVSEGSMYARVDRPA
NQVCFAPPKVAEEALSDWAADISELLHLVERTTHLISKEMMIHKVV*
back to top
Synonyms
Publications