NO17G00280, NO17G00280 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO17G00280 vs. NCBI_GenBank
Match: XP_001418188.1 (Oxa1 family transporter: 60 KD inner membrane protein OxaA-like protein [Ostreococcus lucimarinus CCE9901] >ABO96481.1 Oxa1 family transporter: 60 KD inner membrane protein OxaA-like protein [Ostreococcus lucimarinus CCE9901]) HSP 1 Score: 187.2 bits (474), Expect = 1.300e-43 Identity = 100/254 (39.37%), Postives = 151/254 (59.45%), Query Frame = 0 Query: 216 ENWPSDHAIR-ILEFLHDTTGMPFWATIVGATLILRSTLFPLVIMTARNAAKMTIMRPEMDAITERIKAAPTGDRQAQQRYQKELYGLFDKYQCSPFRSFVGPLANIAVFVPMFFGLRKMGEYGIPGFNEGGLHWFTDLGAADPTYILPGLITLSFLAVTEIG-MDGVQMQVSPQIKMVFRVLPIVFVPFTAQMPVGCLLYWGSSNLFSIGQTLLLRNPALKRRFGIPDIPKKAQSMAADANPFQKLLDSFEEK 468 ++WP+ A+ +E+ H G+ +W IVGAT+ +R+ FPL++M RN AKM + +PE++A+ ++K+ P D + Y KE+ ++ KY +P +SF L N VF+ FF + KM + G+P F GG + DL ADPTY LP L +L+FLA E+G ++G+Q S Q+K R L + VP TA P G +YW +SN+FS QT + R A K GIPD+ A++ A+A + LD F++K Sbjct: 34 QSWPTTAALMYAMEYFHVAHGLEWWLAIVGATVFMRTITFPLIVMQMRNTAKMQLCKPELEALQAKMKSNPQQDPELANAYYKEMQKVWKKYDVNPVKSFAPILINAPVFISFFFAISKMAQ-GVPSFESGGPSMYPDLSMADPTYSLPILSSLTFLASVELGAVEGMQTSQSAQMKWFLRALAVAMVPLTASFPQGVFVYWITSNIFSGFQTSITRTKAFKSTMGIPDVSAVAEA-PAEAALGRVQLDRFQKK 285
BLAST of NO17G00280 vs. NCBI_GenBank
Match: XP_003079772.2 (Membrane insertase OXA1/ALB3/YidC [Ostreococcus tauri] >CEF98290.1 Membrane insertase OXA1/ALB3/YidC [Ostreococcus tauri]) HSP 1 Score: 185.7 bits (470), Expect = 3.800e-43 Identity = 99/255 (38.82%), Postives = 150/255 (58.82%), Query Frame = 0 Query: 215 LENWPSDHAIR-ILEFLHDTTGMPFWATIVGATLILRSTLFPLVIMTARNAAKMTIMRPEMDAITERIKAAPTGDRQAQQRYQKELYGLFDKYQCSPFRSFVGPLANIAVFVPMFFGLRKMGEYGIPGFNEGGLHWFTDLGAADPTYILPGLITLSFLAVTEIG-MDGVQMQVSPQIKMVFRVLPIVFVPFTAQMPVGCLLYWGSSNLFSIGQTLLLRNPALKRRFGIPDIPKKAQSMAADANPFQKLLDSFEEK 468 +++WP+ A+ +E+ H G+ +W IVGAT+ +R+ FPLV+M RN A+M + +PE++A+ ++K+ P+ D + Y E+ ++ KY +PF+SF L N VF+ +F + KM G+P F GG + DL ADPTY LP L +L+FLA E+G ++G+Q S Q+K R L + VP TA P G +YW +SN+FS QT + R K GIPD+ A + ADA + LD F++K Sbjct: 153 VQSWPTTAALMYAMEYFHVAHGLEWWLAIVGATVFMRTVTFPLVVMQMRNTARMQLCKPELEALQAKMKSNPSQDPELATAYYAEMQKVWKKYDVNPFKSFAPVLINAPVFISFYFAISKMAA-GVPSFETGGPSMYPDLSIADPTYSLPILSSLTFLASVELGTVEGMQTSQSAQMKWFLRALAVAMVPLTASFPQGVFVYWITSNMFSGVQTSITRTKGFKAAMGIPDVSAVADA-PADAALSRVQLDQFQKK 405
BLAST of NO17G00280 vs. NCBI_GenBank
Match: OUS48545.1 (putative cytochrome oxidase assembly protein [Ostreococcus tauri]) HSP 1 Score: 185.7 bits (470), Expect = 3.800e-43 Identity = 99/255 (38.82%), Postives = 150/255 (58.82%), Query Frame = 0 Query: 215 LENWPSDHAIR-ILEFLHDTTGMPFWATIVGATLILRSTLFPLVIMTARNAAKMTIMRPEMDAITERIKAAPTGDRQAQQRYQKELYGLFDKYQCSPFRSFVGPLANIAVFVPMFFGLRKMGEYGIPGFNEGGLHWFTDLGAADPTYILPGLITLSFLAVTEIG-MDGVQMQVSPQIKMVFRVLPIVFVPFTAQMPVGCLLYWGSSNLFSIGQTLLLRNPALKRRFGIPDIPKKAQSMAADANPFQKLLDSFEEK 468 +++WP+ A+ +E+ H G+ +W IVGAT+ +R+ FPLV+M RN A+M + +PE++A+ ++K+ P+ D + Y E+ ++ KY +PF+SF L N VF+ +F + KM G+P F GG + DL ADPTY LP L +L+FLA E+G ++G+Q S Q+K R L + VP TA P G +YW +SN+FS QT + R K GIPD+ A + ADA + LD F++K Sbjct: 153 VQSWPTTAALMYAMEYFHVAHGLEWWLAIVGATVFMRTVTFPLVVMQMRNTARMQLCKPELEALQAKMKSNPSQDPELATAYYAEMQKVWKKYDVNPFKSFAPVLINAPVFISFYFAISKMAA-GVPSFETGGPSMYPDLSIADPTYSLPILSSLTFLASVELGTVEGMQTSQSAQMKWFLRALAVAMVPLTASFPQGVFVYWITSNMFSGVQTSITRTKGFKAAMGIPDVSAVADA-PADAALSRVQLDQFQKK 405
BLAST of NO17G00280 vs. NCBI_GenBank
Match: ORX56936.1 (hypothetical protein DM01DRAFT_1334493 [Hesseltinella vesiculosa]) HSP 1 Score: 183.0 bits (463), Expect = 2.400e-42 Identity = 100/254 (39.37%), Postives = 148/254 (58.27%), Query Frame = 0 Query: 226 ILEFLHDTTGMPFWATIVGATLILRSTLFPLVIMTARNAAKMTIMRPEMDAITERIKAAPT-GDRQAQQRYQKELYGLFDKYQCSPFRSFVGPLANIAVFVPMFFGLRKMGEYGIPGFNEGGLHWFTDLGAADPTYILPGLITLSFLAVTEIGMD-GVQMQVSPQIKMVFRVLPIVFVPFTAQMPVGCLLYWGSSNLFSIGQTLLLRNPALKRRFGIPDIPKKAQSMAADANPFQKLLDSFEEKKRLKATAEAE 478 +LE +H + G+P+WATI AT+++R+ L PL+I RN A++ + P++ I +K A + GD A +Y EL LF K +C P +S PL + V + F LR M E +PG +GGL WFTDL A DP Y+LP + LAV E G + G S +K R + ++ VPFTA MP G +YW +SN++SIGQ L L+NPA+++ IP + K A+ + D+ F +D+F E++ L E + Sbjct: 104 MLEAVHVSMGLPWWATIATATVLVRTALLPLIIKLQRNNARLMNINPDVQRIMGNLKTAQSEGDTLATTKYSGELQELFKKNECHPMKSLGLPLIQMPVMISFFMALRAMAELPVPGMVDGGLAWFTDLTAKDPYYVLPAVSAAGMLAVLEAGTEAGSATPQSKGMKNFMRGVTVLMVPFTAWMPSGVFIYWLTSNVYSIGQILALKNPAIRKGLNIPQLIKPAKELQKDSKGF---MDNFREQQVLYERKEKD 354
BLAST of NO17G00280 vs. NCBI_GenBank
Match: EPB90412.1 (hypothetical protein HMPREF1544_02778 [Mucor circinelloides f. circinelloides 1006PhL]) HSP 1 Score: 182.6 bits (462), Expect = 3.200e-42 Identity = 98/254 (38.58%), Postives = 147/254 (57.87%), Query Frame = 0 Query: 226 ILEFLHDTTGMPFWATIVGATLILRSTLFPLVIMTARNAAKMTIMRPEMDAITERIKAAPT-GDRQAQQRYQKELYGLFDKYQCSPFRSFVGPLANIAVFVPMFFGLRKMGEYGIPGFNEGGLHWFTDLGAADPTYILPGLITLSFLAVTEIGMD-GVQMQVSPQIKMVFRVLPIVFVPFTAQMPVGCLLYWGSSNLFSIGQTLLLRNPALKRRFGIPDIPKKAQSMAADANPFQKLLDSFEEKKRLKATAEAE 478 + E++H +G+P+W TI AT+ +R L PL+I RN A++ + P+++ I E +KAA GD A +Y +E+ LF K +C P +S PL + V + F +R M E +PG + GL WFTDL A DP Y+LP + +AV E G + G S +K VFR L +V VPFTA MP G +YW +SN FSIGQ L L+NPA++ IP + KK + + + F +++F+++++ E E Sbjct: 133 MFEYIHVYSGLPWWGTIAVATVAVRVALLPLMIKIQRNNARLMNINPDVNRIMENLKAAQAEGDSLATGKYTQEIQTLFKKNECHPMKSMGLPLIQMPVMISFFMAIRAMAEMPVPGLQDQGLFWFTDLAAKDPYYVLPVVSAAGVMAVLEAGTEAGAANPQSKGMKNVFRALTLVMVPFTAWMPSGVFVYWITSNFFSIGQILALKNPAVRNALSIPKLKKKPEELQKNTKGF---MENFKDQQKHHDKLEKE 383
BLAST of NO17G00280 vs. NCBI_GenBank
Match: GAN00829.1 (mitochondrial inner membrane protein OXA1L-like [Mucor ambiguus]) HSP 1 Score: 182.6 bits (462), Expect = 3.200e-42 Identity = 99/254 (38.98%), Postives = 146/254 (57.48%), Query Frame = 0 Query: 226 ILEFLHDTTGMPFWATIVGATLILRSTLFPLVIMTARNAAKMTIMRPEMDAITERIKAAPT-GDRQAQQRYQKELYGLFDKYQCSPFRSFVGPLANIAVFVPMFFGLRKMGEYGIPGFNEGGLHWFTDLGAADPTYILPGLITLSFLAVTEIGMD-GVQMQVSPQIKMVFRVLPIVFVPFTAQMPVGCLLYWGSSNLFSIGQTLLLRNPALKRRFGIPDIPKKAQSMAADANPFQKLLDSFEEKKRLKATAEAE 478 + E++H +G+P+W TI AT+ +R L PL+I RN A++ + P+++ I E +KAA GD A +Y +E+ LF K C P +S PL + V + F +R M E +PG + GL WFTDL A DP YILP + +AV E G + G S +K VFR L +V VPFTA MP G +YW +SN FSIGQ L L+NPA++ IP + KK + + + F +++F+++++ E E Sbjct: 133 MFEYIHVYSGLPWWGTIAVATIAVRVALLPLMIKIQRNNARLMNINPDVNRIMENLKAAQAEGDSLATGKYTQEIQTLFKKNDCHPMKSMGLPLIQMPVMISFFMAIRAMAEMPVPGLQDQGLFWFTDLAAKDPYYILPVVSAAGVMAVLEAGTEAGAANPQSKGMKNVFRALTLVMVPFTAWMPSGVFVYWVTSNFFSIGQILALKNPAVRSALSIPKLKKKPEELQKNTKGF---MENFKDQQKHHDKLEKE 383
BLAST of NO17G00280 vs. NCBI_GenBank
Match: ORX92401.1 (hypothetical protein K493DRAFT_285773 [Basidiobolus meristosporus CBS 931.73]) HSP 1 Score: 181.8 bits (460), Expect = 5.500e-42 Identity = 93/217 (42.86%), Postives = 130/217 (59.91%), Query Frame = 0 Query: 227 LEFLHDTTGMPFWATIVGATLILRSTLFPLVIMTARNAAKMTIMRPEMDAITERI-KAAPTGDRQAQQRYQKELYGLFDKYQCSPFRSFVGPLANIAVFVPMFFGLRKMGEYGIPGFNEGGLHWFTDLGAADPTYILPGLITLSFLAVTEIGMD-GVQMQVSPQIKMVFRVLPIVFVPFTAQMPVGCLLYWGSSNLFSIGQTLLLRNPALKRRFGIP 442 LEF+H +TG+P+W TIV TL++R LFP+V+ RNAA + ++PEMD +T + +A GD A +Y E LF+K+ +P + PL V + FF LR M + +P F GG WFTDL AADP YILP + L FLA+ E+G + G + + +K FR + + VP TA +YW +SN FSIGQ L L+NPA+++ GIP Sbjct: 154 LEFIHVSTGIPWWGTIVATTLLIRLALFPIVVKLQRNAAVLHNIKPEMDRLTAHLNRAKSDGDTVAIAQYSHEFRQLFEKHNANPLKMLALPLMQAPVMLSFFFALRDMAQLPVPQFQTGGTAWFTDLTAADPLYILPVVSGLGFLAILELGSEAGTNVGQTKNVKWFFRFMAVAMVPVTANFASSIFVYWVTSNAFSIGQVLTLKNPAIRKSMGIP 370
BLAST of NO17G00280 vs. NCBI_GenBank
Match: ORX77948.1 (hypothetical protein K493DRAFT_293697 [Basidiobolus meristosporus CBS 931.73] >ORY05234.1 hypothetical protein K493DRAFT_275232 [Basidiobolus meristosporus CBS 931.73]) HSP 1 Score: 180.6 bits (457), Expect = 1.200e-41 Identity = 92/232 (39.66%), Postives = 133/232 (57.33%), Query Frame = 0 Query: 227 LEFLHDTTGMPFWATIVGATLILRSTLFPLVIMTARNAAKMTIMRPEMDAITERI-KAAPTGDRQAQQRYQKELYGLFDKYQCSPFRSFVGPLANIAVFVPMFFGLRKMGEYGIPGFNEGGLHWFTDLGAADPTYILPGLITLSFLAVTEIGMD-GVQMQVSPQIKMVFRVLPIVFVPFTAQMPVGCLLYWGSSNLFSIGQTLLLRNPALKRRFGIPDIPKKAQSMAADANP 457 +EF+H +TG+P+W TI T+++R LFP V+ +NAA + ++PEMD +T ++ KA GD A +Y E LF+ ++ +P + PL V + FF LR M + +P F GG+ WFTDL AADP YILP L L FL + E+G + G + K +FR + + VP TA +YW +SN FSIGQ L L+NPAL+++ GIP + K +P Sbjct: 41 MEFIHVSTGIPWWGTIAATTILIRIALFPFVVKLQKNAATLHNIKPEMDRLTAQLNKAKAEGDSAAITQYAHEFKNLFETHKANPIKMLALPLMQAPVMLSFFFALRDMAQLPVPQFQTGGIAWFTDLTAADPYYILPVLSGLGFLTILELGSEAGTNVGQPNNAKWIFRFMSVAMVPLTASFSSSIFVYWVTSNFFSIGQVLALKNPALRKKLGIPLLMKHQVKAVKSGSP 272
BLAST of NO17G00280 vs. NCBI_GenBank
Match: CEP10829.1 (hypothetical protein [Parasitella parasitica]) HSP 1 Score: 179.5 bits (454), Expect = 2.700e-41 Identity = 95/243 (39.09%), Postives = 142/243 (58.44%), Query Frame = 0 Query: 226 ILEFLHDTTGMPFWATIVGATLILRSTLFPLVIMTARNAAKMTIMRPEMDAITERIKAAPT-GDRQAQQRYQKELYGLFDKYQCSPFRSFVGPLANIAVFVPMFFGLRKMGEYGIPGFNEGGLHWFTDLGAADPTYILPGLITLSFLAVTEIGMD-GVQMQVSPQIKMVFRVLPIVFVPFTAQMPVGCLLYWGSSNLFSIGQTLLLRNPALKRRFGIPDIPKKAQSMAADANPFQKLLDSFEE 467 + E++H +G+P+W TI AT+ +R L PL+I RN A++ + P++ I E +K+A + GD A +Y +E+ LF K +C P +S PL + V + F +R M E +PG + GL WFTDL A DP Y+LP + +AV E G + G S +K VFR L +V VPFTA MP G +YW +SN FSIGQ L L+NPA++ IP + K+ + + + F +++F+E Sbjct: 129 MFEYIHVYSGLPWWGTIAVATVAVRVALLPLMIKIQRNNARLMNINPDVTRIMENLKSAQSQGDSLATGKYTQEIQTLFKKNECHPMKSMGLPLIQMPVMISFFMAIRAMAEMPVPGLQDQGLFWFTDLAAKDPYYVLPVVSAAGVMAVLEAGTEAGAANPQSKGMKNVFRALTVVMVPFTAWMPSGVFVYWITSNFFSIGQILALKNPAVRNALNIPKLKKRPEELQKNTKGF---MENFKE 368
BLAST of NO17G00280 vs. NCBI_GenBank
Match: SAM06360.1 (hypothetical protein [Absidia glauca]) HSP 1 Score: 178.7 bits (452), Expect = 4.600e-41 Identity = 96/254 (37.80%), Postives = 145/254 (57.09%), Query Frame = 0 Query: 226 ILEFLHDTTGMPFWATIVGATLILRSTLFPLVIMTARNAAKMTIMRPEMDAITERIKAAPT-GDRQAQQRYQKELYGLFDKYQCSPFRSFVGPLANIAVFVPMFFGLRKMGEYGIPGFNEGGLHWFTDLGAADPTYILPGLITLSFLAVTEIGMD-GVQMQVSPQIKMVFRVLPIVFVPFTAQMPVGCLLYWGSSNLFSIGQTLLLRNPALKRRFGIPDIPKKAQSMAADANPFQKLLDSFEEKKRLKATAEAE 478 +LE +H T G+P+WA+I AT+I+R L PL++ RN A++ + PE+ I +K A GD A +Y E+ LF K +C P +S PL + V + F LR M E +PG EGG+ WFTDL A DP YILP + LAV E G + G S +K R + ++ VPFTA MP G +YW +SN FSI Q L L++P+++ IP + K A+ + ++ F +++F+++++L E + Sbjct: 109 MLEAVHVTMGLPWWASIAAATVIVRMALLPLIVKLQRNNARLMNINPEVTRIMNNLKTAQADGDAVATGKYSHEISDLFKKNKCHPMKSLGLPLVQMPVMISFFMALRAMAELPVPGMTEGGMSWFTDLAAKDPYYILPAVSAAGMLAVLEAGTEAGAATPQSKGMKNFMRGVTVLTVPFTAWMPSGVFIYWITSNAFSIAQILALKSPSVRSALDIPQLVKPAKELQKESKGF---MENFKDQQKLYEKKEKD 359 The following BLAST results are available for this feature:
BLAST of NO17G00280 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO17G00280 ID=NO17G00280|Name=NO17G00280|organism=Nannochloropsis oceanica|type=gene|length=3237bpback to top protein sequence of NO17G00280.1 >NO17G00280.1-protein ID=NO17G00280.1-protein|Name=NO17G00280.1|organism=Nannochloropsis oceanica|type=polypeptide|length=521bpback to top Synonyms
Publications
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