NO17G00250, NO17G00250 (gene) Nannochloropsis oceanica
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Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO17G00250 vs. NCBI_GenBank
Match: EWM23168.1 (uncharacterized protein Naga_100043g43 [Nannochloropsis gaditana]) HSP 1 Score: 199.5 bits (506), Expect = 5.100e-47 Identity = 190/745 (25.50%), Postives = 317/745 (42.55%), Query Frame = 0
Query: 96 SRRCPSRKTVGISLIILGPVLIALGLGMHYGIRKAFPSQLHAMAVMDSTHHSRFKAWESNAGQGGATRQYAYTFQAVTNPQDVLEGQAPVFESKGPYVFDRTYKRVGVQFEDNGNAVTFSERYKSSFNAKASAGSADDKVTIFNPAWHQVMSMY--GSETGLSKGSGSLILLKLRRAFQQEFLFTSGVDALQTGLSESSFGFSLALKMLKYPEHSFETVWGGHCVTNDKGEQLCGIKDGSLLETSGLLKEKGSRLSVIAGDLCAVPDMA-AHPIAPEVSKRIWKATDKYSILNFEEEGATLTEQGIFHGLTTWVRAATNATARRELADWFKITDKQVNVVASHLAASVNNEALFAELKARYLTSLPEDKASKMEKEIQTREDMLWRQFYAADVIPALKKNPAA---SIKEEAHFEFGLFAQTGGR---TLEGTGVSMENLKCLFDYVHANRTDFELRLWGYQRAWYKHGQLDDLSGEFEAYEPVPEWDACFPDPAALASLKDYVNYLIDILFIP--EFEALTKTDGIIATKTARAWVLG-DGPLELFSEALLDEDDPR-INFALLSHDENTGGFQSDAAYCHQSSDAVNIYNSCHRNPEDKNRFYRGN-----------MTMYTGKDDVNKVGQWKRLYGMETL-NVWQ-APMPIDRGATRLHAAYPWERQPLLPGYIDGLSVPP-GLLHGAPLDTTYLSLFMESLNAPFPVIYEKDVRRWGIPLKRFVFHPDAFSQRRPDAAVF 814
SR+C G L + G +L+AL + +++ V+D+ +H FKAW + A Q Y Y +TNP++ L GQ P GP+ F + K++ V F D G V++ + + F D+ ++++ +++Y GSE+ L K L ++ + FL +A+ + + + L ++ P + T WGG C +N G ++CG S + T +K +++ + LC + A I +R+W TD YSI+N + A +G++ W+ + R +A F IT +Q N + ++L + L + +L SLP + A E+ D LWRQ+ DV+ LK A S++ E EF +A+ G T G ++ KC FD F+ + G D E ++ EP+ + CF A L+ Y+ YL + P + + L K G++ KT R + G P+ S L +DDPR + F+LL++D + G C S+D N + +C + + + G+ T +TG+DD + G + G ++ ++W +P G L + + GY DG+ PP G + G LS+F+ P + +DV G+ LKRF P+ FS R DA F
Sbjct: 251 SRQCRR----GFGLFVAGLLLMALAGVVDIEGNAYRHAKIREAIVVDAPNHPEFKAWATGA-QQKTPLFYTYHLYNITNPEEFLAGQPPQVHEVGPFSFQQRTKKINVTFSDEGRLVSYITQIQHEFTGDP---EELDRQSVYSLNLPYSVAIYTAGSESNLLKIGSQQGLAEVLFQMKTYFLPALKENAVVMAIQMAVDAMTQILNAMQAPSEATATRWGGGCTSNMFG-KICGF---STVATFFSAVDKRNKMDLNLLQLCINTKLTEAEQIPLATVRRLWDPTDVYSIMNVDRGSAAER-----YGISYWLWG--DVDVRDTIAMHFGITIRQYNALRAYLLDIYRSPMLEMAVVKIFLESLPPEDAG--TAEVAQWSDFLWRQWAVGDVVTRLKNESMARPESMQPELPPEFAWYAEKAGYKTFTYGGKRLNRTQAKCTFDLAKRPMVYFQTYVLGLPGPSISRPTFVDFGLE-DSGEPLIDPRDCFQSKNDWALLQGYLAYLAEYFVAPLLQEDVLDKNGGLVTRKTLRECLYGYSAPILQLS---LAKDDPRAMKFSLLANDPSLDG----PGRCLSSNDVENPFTACRFSSRNITQNMDGSEQVARIFDKVPNTYHTGRDDTVRAGAFYTYRGDRSIADIWPGGSIPFAGGTKDLPGSIQY-------GYSDGMQFPPFGAIDG---PNVVLSVFVPGFVLPLRFAFSEDVDVQGVKLKRFRLVPETFSSSRSDAKTF 956
BLAST of NO17G00250 vs. NCBI_GenBank
Match: EWM24842.1 (scavenger receptor class member 2 [Nannochloropsis gaditana]) HSP 1 Score: 95.1 bits (235), Expect = 1.400e-15 Identity = 70/257 (27.24%), Postives = 120/257 (46.69%), Query Frame = 0
Query: 91 TPTCLSRRCPSRKTVGISLIILGPVLIALGLGM--HYGIRKAFPSQLHAMAVMDSTHHSRFKAWESNA-------GQGGATRQYAYTFQAVTNPQDVLEGQAPVFESKGPYVFDRTYKRVGVQFEDNGNAVTFSERYKSSFNAKASAG--SADDKVTIFNPAWHQVMSMYGSETGLSKGSGSLILLKLRRAFQQEFLFTSGVDALQTGLSESSFGFSLALKMLKYPEHSFETVWGGHCVTNDKGEQLCGIKDGSLLE 337
TP R SR T I L++L L+ALG + H + + + V+DS H + AW ++A G+G + + F + N + L+G+ P + KGPY F +T K+V V F + G V++ ++ ++ + S + D VT+ N A+ ++ +GSE+ L + L+++ RA++ FL T A+ ++ AL L Y E WGG C + +Q CG + + L+
Sbjct: 135 TPPPSRRVTVSRWTRNIGLLLLAIGLVALGSAIVSHTYLPEWRDKRALESLVVDSPDHPNYAAWVNHASPSSAGRGEGDSPTYQRFYFFHLVNSKGFLQGKKPFYLEKGPYTFRQTKKKVDVNFSEKGTLVSYVTLVQNKYSPEQSGKDVALSDTVTMLNLAYATAVATFGSESNLLRYGSRRALMEIERAWESTFLPTLKERAVAATAVKTLALIDEALTKLNYQEDGTAIRWGGGCASAGMVQQ-CGFEKAAFLK 390
BLAST of NO17G00250 vs. NCBI_GenBank
Match: EWM20340.1 (hypothetical protein Naga_101063g1, partial [Nannochloropsis gaditana]) HSP 1 Score: 85.1 bits (209), Expect = 1.400e-12 Identity = 39/61 (63.93%), Postives = 49/61 (80.33%), Query Frame = 0
Query: 951 GMTMRVNIVMQAYMSLLPHYLTHEVFSPTAYTGPRVPFFECRISQHASPSQRREFKMKVEG 1012
G++MRVN+V QAY+SLLP YL+H++F P+AY G RVPFF+CRISQ AS +Q EF KV G
Sbjct: 1 GLSMRVNVVTQAYLSLLPKYLSHDLFFPSAYKGARVPFFQCRISQRASRAQTAEFHRKVRG 61
BLAST of NO17G00250 vs. NCBI_GenBank
Match: XP_013758835.1 (lysosome membrane protein 2 [Thecamonas trahens ATCC 50062] >KNC48268.1 lysosome membrane protein 2 [Thecamonas trahens ATCC 50062]) HSP 1 Score: 80.5 bits (197), Expect = 3.500e-11 Identity = 55/159 (34.59%), Postives = 82/159 (51.57%), Query Frame = 0
Query: 102 RKTVGISLIILGPVLIALGLGMHYGIRKAFPSQLHAMAVMDSTHHSRFKAWESNAGQGGATRQYAYTFQAVTNPQDVLEGQAPVFESKGPYVFDRTYKRVGVQFEDNGNAVTFSERYKSSFNAKASAGSADDKVTIFN--PAWHQVMSMYGSETGLSKG 259
RK VGI+ + G +LIA ++ I +++ V+DS + S + W S+ G + Q +YTF +TN DVL G APVFE GP+V+ R ++ +F D G V+F E + SF + S DKV + N P + ++ GSE L G
Sbjct: 8 RKAVGITACVAGLLLIAAATTVYLLIPYLVQKKINDAVVIDSPNSSGYDNWVSSYHSGNSELQ-SYTFFNLTNAPDVLAGAAPVFEPVGPFVYRRNTVKLDPKFLDGGARVSFKEMSQYSFVPEQSIYDQLDKVLLTNYFPFYQAAVNKAGSEKNLLYG 165
BLAST of NO17G00250 vs. NCBI_GenBank
Match: ASS83012.1 (lysosome membrane protein 2-A, partial [Physarum polycephalum]) HSP 1 Score: 71.6 bits (174), Expect = 1.600e-8 Identity = 52/180 (28.89%), Postives = 83/180 (46.11%), Query Frame = 0
Query: 105 VGISLIILGPVLIALGLGMHYGIRKAFPSQLHAMAVMDSTHHSRFKAWESNAGQGGATRQYAYTFQAVTNPQDV-LEGQAPVFESKGPYVFDRTYKRVGVQFEDNGNAVTFSERYKSSFNAKASAGSADDKVTIFNPAWHQVMSMYGSETGLSKGSGSLILLKLRRAFQQEF--LFTSGV 282
VG+ ++ILG + I +G +G+ P Q V+DS +FK W Q + F +TN +V G P + + GPY++ R K + V F D G+ + F + + +N + S S D +T NP + ++ GSE + G+ + FQ EF L+TS V
Sbjct: 9 VGVVILILGLLFIFVGT---FGVDYVLPKQKTGYLVIDSEKSPQFKDWAGGYDQ-KVEYDMVFYFYNLTNADEVRYVGATPNYTTVGPYIYRRYRKSINVSFPDGGDQIKFVDFREYQYNQEKSNRSQYDLITNMNPVFLSALAQAGSEQQMLGGAAGGMFPNYTTYFQGEFISLYTSFV 184
BLAST of NO17G00250 vs. NCBI_GenBank
Match: KYR01451.1 (lysosomal integral membrane protein II [Tieghemostelium lacteum]) HSP 1 Score: 69.7 bits (169), Expect = 6.200e-8 Identity = 49/160 (30.63%), Postives = 80/160 (50.00%), Query Frame = 0
Query: 112 LGPVLIALGLGMHYGIRKAFPSQLH--AMAVMDSTHHSRFKAWESNAGQGGAT---RQYAYTFQAVTNPQDVLEGQAPVFESKGPYVFDRTYKRVGVQFEDNGNAVTFS--ERYKSSFNAKASAGSADDKVTIFNPAWHQVMSMYGSE--TGLSKGSGSL 263
+G VL+A+G+ + + + A +QL ++ + ++ W G T R Y Y +TNP +V +G PVFE GPY ++ Y+R+ D+ N VTF +R+ +A + D++ FN A+ ++ GSE GLS GSGS+
Sbjct: 15 IGLVLVAVGIIVWFTVDTAIHNQLENASITLPENDKSDLVNPWTRFVGNQNDTNNRRLYVYYVYNLTNPDEVTQGAYPVFEEVGPYHYNYIYERIIGNITDDENVVTFQMWKRFIPILDAPNTRNPLTDQIYHFNLAYAAIVKSSGSELNLGLSLGSGSV 174
BLAST of NO17G00250 vs. NCBI_GenBank
Match: ELT97370.1 (hypothetical protein CAPTEDRAFT_185197 [Capitella teleta]) HSP 1 Score: 68.6 bits (166), Expect = 1.400e-7 Identity = 46/166 (27.71%), Postives = 89/166 (53.61%), Query Frame = 0
Query: 98 RCPSRKTVGISLIILGPVLIALGLGMHYGIRKAFPSQLHAMAVMD----STHHSRFKAWESNAGQGGATRQYAYTFQAVTNPQDVL-EGQAPVFESKGPYVFDRTYKRVGVQFEDNGNAVTFSERYKSSFNAKASAG------SADDKVTIFNPAWHQVMSMYGSE 253
R S+K +G+ ++ G +++A+ L + G++ FPS ++ + D S H RF W N + ++ + + +TNP D L AP +GPYV+ + +++ V+F ++ + V+F + F+A+ +A + +D +TI NPA+ Q++S GS+
Sbjct: 10 RSMSKKILGVGIVATGALILAIALII--GLK--FPSYVYRRNLEDMCVLSVQHDRFSIWTHNKYRDQSSHIF---YWQITNPDDFLYHNAAPKVVEQGPYVYKQFEQKLNVEFPEDTHDVSFYLWVRQEFDAETTAEKCGSQCTENDNITILNPAYFQLLSRAGSD 168
BLAST of NO17G00250 vs. NCBI_GenBank
Match: XP_003283517.1 (hypothetical protein DICPUDRAFT_147185 [Dictyostelium purpureum] >EGC40014.1 hypothetical protein DICPUDRAFT_147185 [Dictyostelium purpureum]) HSP 1 Score: 65.9 bits (159), Expect = 8.900e-7 Identity = 63/262 (24.05%), Postives = 106/262 (40.46%), Query Frame = 0
Query: 106 GISLIILGPVLIALGLGMHYG-IRKAFPSQLHAMAVMDSTHHSRFKAWESNAGQGGATRQYAYTFQAVTNPQDVLEGQAPVFESKGPYVFDRTYKRVGVQFEDNGNAVTFSERYKSSFNAKASAGSADDKVTIFNPAWHQVMSMYGSETGLSKGSGSLILLKLRRAFQQ----EFLFTSGVDALQTGLSESSF---GFSLALKMLKYPEHSFETVWGGHCVTNDKGEQLCGI--------KDGSLLETSGLLKEKGSRLSVI 352
GI L +LG VL L + I A + + V+DS + R+ WE QY Y + +TNP+ ++G+ P+F GP+ + Y+ V F DNGN V +++ K + + +T NPA+ +M + + L IL + Q E+L + + +S + ++ LK L + F W T KG G+ G LE++ + + + LS+I
Sbjct: 11 GIILSVLGTVLFILSFALFPSLINTATRNAVIDAVVVDSPNAQRYSDWEGQQSVENLYLQYYYAWN-LTNPEQFIQGKKPIFNQVGPFNYKYEYENDNVTFLDNGNLVEYTQVKKYIYLEDSPFDPTQVSITNINPAFLGLMFQMSAISSLIDLPAEDILFAIGGCGQMKLFLEYLNSDTFTEIAYFVSNPALYLNQYNAILKSLSNNQIYFFEQWANGTSTPTKGHGWNGMLVSFNSSEPSGITLESAQQIFNEANELSII 271
BLAST of NO17G00250 vs. NCBI_GenBank
Match: XP_001623676.1 (predicted protein [Nematostella vectensis] >EDO31576.1 predicted protein [Nematostella vectensis]) HSP 1 Score: 65.9 bits (159), Expect = 8.900e-7 Identity = 44/178 (24.72%), Postives = 86/178 (48.31%), Query Frame = 0
Query: 99 CPSRKTVGISLIILGPVLIALGLGMHYGIRKAFPSQLHAMAVMDSTHHSRFKAWESNAGQ--------------GGATRQYAYTFQAVTNPQDVL-EGQAPVFESKGPYVFDRTYKRVGVQFEDNGNAVTFSERYKSSFNAKASAGSA-----DDKVTIFNPAWHQVMSMYGSETGLS 257
C ++K GI L+I G V + +G+ + I + L ++S H+ + +W S + G + + F + N L +G+ P FE +GPYV+ T +++ V F+DNG+ VT+ + + +F+A A+A + D++T+ N + ++ G + G++
Sbjct: 2 CSNKKRTGIILVIFGIVAVVVGILVGQFITRRVKQGLDDQICINSKDHTGYDSWVSELLKAPDIWYHTIFRFQIGASESSASIYFWHIKNKNGFLHKGETPQFEERGPYVYKTTTEKIDVSFDDNGH-VTYKKYSQQTFDADATAQACPQCKESDQMTVLNLGYLGAVAQAGGDMGIA 178 The following BLAST results are available for this feature:
BLAST of NO17G00250 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 9
Relationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO17G00250 ID=NO17G00250|Name=NO17G00250|organism=Nannochloropsis oceanica|type=gene|length=8904bpback to top protein sequence of NO17G00250.1 >NO17G00250.1-protein ID=NO17G00250.1-protein|Name=NO17G00250.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1061bpback to top Synonyms
Publications
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