NO17G00220, NO17G00220 (gene) Nannochloropsis oceanica

Overview
NameNO17G00220
Unique NameNO17G00220
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3190
Alignment locationchr17:77209..80398 +

Link to JBrowse

Properties
Property NameValue
DescriptionMajor intrinsic protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr17genomechr17:77209..80398 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
GO:0055085transmembrane transport
Vocabulary: Molecular Function
TermDefinition
GO:0015267channel activity
GO:0015267channel activity
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
GO:0016021integral component of membrane
GO:0016020membrane
Vocabulary: INTERPRO
TermDefinition
IPR023271Aquaporin-like
IPR034294Aquaporin_transptr
IPR000425MIP
Homology
BLAST of NO17G00220 vs. NCBI_GenBank
Match: EWM27571.1 (major intrinsic protein [Nannochloropsis gaditana])

HSP 1 Score: 208.0 bits (528), Expect = 8.000e-50
Identity = 139/370 (37.57%), Postives = 204/370 (55.14%), Query Frame = 0
Query:   99 VLAEGVGTSILTLVIALVGSSLAGLTAGMQGLGTGAALLALILAGRSSSGADYNPIVTTALVLLGKMSLGMGLAYFASQVIGGLVGGAMAKILLGPVGVLADPSFTLNPASIFARIFFSFAVVLTVLNAAMSKGGQDTWKHEEHFFAPALAVVVALASTMGICLNPAAAWGIFTAAGKSKGGVASWVLSLLGAFPAMAVFRLADPDEAEMPTEHVSYFPKTLVGKEATRSIGPYVSECVGTFILTAVVTMALATGRVAAPLAAGAMVISLTLSQGHLSGAHFNPAVTIGLFVRKGSKAKDRQRVVGYIVAQILGALMAARMGSLAFGNEVCHGKLLPLPVPGGSEGQAFGAEFLYTSLAIQTVLTLTGRT 469
            ++ E +GT+I+T+   L+G   A ++ G++ LG  A L+ LI AG   SGA+YNP ++ AL+LLGKM     L Y + Q++G L+GG + K+LL P G + DPS     A+      FSFA++LT L   +SK      +    FF  A+++VV L    G  +NPA A G+F  AG  KG +A  +L L+  FPA   FRL D DE       +   P   V     R+ GPY+ E VG+F+LT  + +AL T  +  PLAAG  +  L    G++SGAH NPAV++G+++R   + +  Q++ GY   Q+LGAL +  M     G     G+   +P    S GQAF  E L+T + + T+L +   T
Sbjct:   69 LIMETLGTTIITVTAGLLGK--ADMSPGLKALGVAAVLMPLIHAGARVSGANYNPSISVALLLLGKMPPAQCLFYISCQLVGALIGGVLTKVLL-PQGAM-DPSSVGTIATCVPEALFSFALILTALQTTVSKS-----QSRNSFFGSAISIVVFLGVAFGAGMNPAVAGGLFAGAGHQKGLLARTILPLIMTFPAAFFFRLTDIDETY--AREMGLVPS--VSAAFVRAYGPYLIELVGSFLLTTTIGLALVTKNLPIPLAAGLALTFLAFGSGYVSGAHLNPAVSLGVYLRNARRIR-MQKLAGYASIQVLGALASGAMLRYVVGAGALEGR-YSVPRAVISCGQAFAVEALFTCMMVSTILHINAST 423          
BLAST of NO17G00220 vs. NCBI_GenBank
Match: OLQ10684.1 (Chaperone protein dnaJ 2 [Symbiodinium microadriaticum])

HSP 1 Score: 111.3 bits (277), Expect = 1.000e-20
Identity = 120/429 (27.97%), Postives = 189/429 (44.06%), Query Frame = 0
Query:   98 AVLAEGVGTSILTLVIALVGSSLAGLTAGMQGLGTGAALLALILAGRSSSGADYNPIVTTALVLLGKMSLGMGLAYFASQVIGGLVGGA-MAKILLGPVGVLADPSFTLNPASIFARIFFSFAVVLTVLNAAMSKGGQDTWKHEEHFFAPALAVVV-----ALASTMGICLNPAAAWGIFTAAGKSKGGVASWV-LSLLGAFPAMAVFRLADPDEAEMPTEHVSYFPKTLVGKEATRSIGPYVSECVGTFILTAVVTMALATGRVAAPLAAGAMVISLTLSQGHLSGAHFNPAVTIGLFVRKGSKAKDRQRVVGYIVAQILGALMAARMGSL----AFGNEVCH----GKLLPLPVPGGSEGQAFGAEFLYTSLAIQTVLTLTGRTAPPSLLTPIGVAAVFTASLMASQGLSGGSLNPAIATAMFLVNA 512
            A  AE  GT  L   +  VG  +A  +A          L+ ++ A    SG   NP VT AL L  K        Y A+Q++ G+  G+  A +L  P  +     FT + A I   I ++F +   VLN A S    +  K    FF  A+  V+     A     G C NPA A+G+  ++    G   +WV   ++GA  A   FR+  P++    +  +S +   L  K         VSE +G F+L   V + +  G  +   +A A ++ +  S G +SGAHFNPAV++ + +R      D   ++ YI  Q+L    A  + S+    + G +V H    GK   L   G +E   F     Y  LA  T+     +    +    + + +  TA  +AS  +SGG LNPA++T + + ++
Sbjct: 1244 AYAAEFAGTFAL---VFTVGCCVATGSAVWNATAIACVLMVMVYATGPISGGHLNPAVTLALALADKFDWEQVPVYCATQIVAGIAAGSCTASLLSAPEPLAPAGDFTWSYACIVETI-YTFMLCFVVLNCAASIRNNEA-KDGNQFFGLAIGFVIIAGGYAGGDVSGACFNPAVAFGVDFSSKAGLGWSFAWVGFEMVGAALAALAFRVVRPEDYGGDSSSLSPYEPPLYVK--------LVSEFLGVFMLVLTVGLNVVLGSASTAWSAAAALMCMIYSLGDVSGAHFNPAVSLAVCLRGKCSVPD---LLTYIPVQLLAGATAGAIVSMFHQRSSGKDVSHFLEPGKDHTLAQAGVAE-MIFTFVLCYVVLATATIAKPESQRTKQNFYFGLAIGSCVTAGGIASGAISGGELNPAVSTGLAMASS 1655          
BLAST of NO17G00220 vs. NCBI_GenBank
Match: OLQ14241.1 (Aquaporin NIP2-1 [Symbiodinium microadriaticum])

HSP 1 Score: 105.9 bits (263), Expect = 4.300e-19
Identity = 134/494 (27.13%), Postives = 216/494 (43.72%), Query Frame = 0
Query:   99 VLAEGVGTSILTLVIALVGSSLAGLTAGMQGLGTGAALLALILAGRSSSGADYNPIVTTALVLLGKMSLGMGLAYFASQVIGGLVGGAMAKILLGP-VGVLAD-PSFTLNPASIFARIFFSFAVVLTVLNAAMSKGGQDTWKHEEHFFAPALAVVV-----ALASTMGICLNPAAAWGIFTAAGKSKGGVASW-VLSLLGAFPAMAVFRLADPDEAEMPTEHVSYFPKTLVGKEATRSIGPYVSECVGTFILTAVVTMALATGRVAAPLAAGAMVISLTLSQGHLSGAHFNPAVTIGLFVRKGSKAKDRQRVVGYIVAQILGALMAARM-GSLAFGNEVCHGKLLPLPVPGGSEGQAFGAEFLYTSLAIQTVLTL-TGRTAPPSLLTPIGVAAVFTASLMASQGLSGGSLNPAIATAMFLVNAT-----GRQMQSLWVYWMAPVLASVVVGLGY------RKMVGEEGGVE---DAVEGAKKSWEMAVGEAKAA 569
            +LAE +GT  L   +  V +S     +        + L+ ++ A    SG   NP VT A+ L+GK S G  + Y+  Q  G  +  A+ KI+  P + V+A  P F+   A+    + ++  +V  VL  A++K           F+  A+  VV     A+    G  LNPA +  +   +GK       W    L GA  A  V+R+  P+E          F K+       R+    ++E  GTF+L   V + + +G  A   +A A ++ +  S G++SGAHFNPAVT+ + +  G +   R+    YIVAQ+ G L+A  +  +   G+ V    +  +P       QA  AE + T      VL + T R      L  + VA+  T    A   +SGG LNP++   + + N       G      W+ ++   LA  ++  G       ++ + E GG E   D V+G +K       + +AA
Sbjct:  232 LLAEALGTFALVFTVGCVVTS--PTPSPWSATSIASVLMVMVYATGPISGGHLNPAVTFAMALVGKKSFGGVMIYWLFQFTGAFMAAAVYKIVCAPHLAVVAPVPPFSAGYAAA-GELLYTSMLVFVVLCCAVAKKNT-----PNQFYGLAIGFVVLAGGHAVGRISGAALNPAVSVALGLGSGKDPHWALVWFAAELAGAALAAGVYRILRPEE----------FGKSTGSPPDLRT--RCLAEAFGTFMLVVTVGLNIVSGSRATAYSAAAALMCMIYSLGNVSGAHFNPAVTLAV-LAAGRERISRRDAGAYIVAQLAGGLLAGLVYAAYHIGSAVADKSIKLVPGRDFDLTQACIAELITTMFLGYVVLCIATVREPYAKDLFGLVVASAVTGGSFAVGSVSGGELNPSVTLGLMIGNVVNPGKGGIGPLGSWLAFIVSELAGGLLAAGLFRLTHRKEFLEETGGDEKDDDGVKGLEKDATEGTKDVEAA 704          
BLAST of NO17G00220 vs. NCBI_GenBank
Match: OLP93687.1 (Aquaporin NIP2-1 [Symbiodinium microadriaticum])

HSP 1 Score: 103.2 bits (256), Expect = 2.800e-18
Identity = 122/430 (28.37%), Postives = 196/430 (45.58%), Query Frame = 0
Query:   99 VLAEGVGTSILTLVIALVGSSLAGLTAGMQGLGTGAALLALILAGRSSSGADYNPIVTTALVLLGKMSLGMGL------AYFASQVIGGLVGGAMAKILLGPVGVLADPSFTLNPASIF-------ARIFFSFAVVLTVLNAAMSKGGQDTWKHEEHFFAPALAVVVALA----STMGICLNPAAAWGI-FTAAGKSKGGVASWVL-SLLGAFPAMAVFRLADPDEAEMPTEHVSYFPKTLVGKEATRSIGPYVSECVGTFILTAVVTMALATGRVAAPLAAGAMVISLTLSQGHLSGAHFNPAVTIGLFVRKGSKAKDRQRVVGYIVAQILGALMAARMGSLAFGNEVCHGKLLPL-PVPGGSEGQAFGAEFLYTSLAIQTVL--TLTGRTAPPSLLTPIGVAAVFTASLMASQGLSGGSLNPAIATAM 507
            +++E VGT +L L    VG ++ G T+   G+     L+  I A  + SGA++NP V+  L +   M  G GL       Y A Q + G+       +L G        SF L P+  F           ++F +   VLN A ++  ++  +  E++      V++A A    +  G C NPA A  +  ++A +  G    +VL  L GA  A A+F+L  P++                G E +      +SE +GTF+L   V + +     A  L+  A + ++  + G +SGAHFNPAVT+ +     S      +   Y+ AQI G ++AA M +  +      G+  PL PV G +  Q   AE ++T L    VL   ++ RT   S +  + + +  T    A  G+SGGSLNPA++  +
Sbjct:   12 LVSEFVGTFLLVLT---VGCNVLGSTSTWGGVSIAFVLMVSIYAMGAISGANFNPAVSVTLGISKSMG-GPGLDWKTVGQYSAVQTLAGISAAVCYCLLYG-------RSFNLTPSEGFGWLNAGLCETLYTFVLTFVVLNVAAAR--KNAIERNEYYGMAIGLVIIAGAYGAGAVSGGCFNPAVALAVDVSSAARGFGWCVPYVLFELAGAAAASALFKLVRPED---------------FGGERSGQ-AELLSEFLGTFVLVLTVGLNVLAKSPAGALSIAAALTAMIYAVGDVSGAHFNPAVTLAILASGRSAQLTPVKASMYVAAQICGGIVAAAMYTFIY-----VGQTFPLGPVAGSTWSQVVVAEAIFTFLLSFVVLCVAVSSRT-KSSQMFGLLIGSCVTVGGFAIGGISGGSLNPAVSVGI 406          
BLAST of NO17G00220 vs. NCBI_GenBank
Match: OLQ14438.1 (Aquaporin NIP1-3 [Symbiodinium microadriaticum])

HSP 1 Score: 101.7 bits (252), Expect = 8.100e-18
Identity = 121/436 (27.75%), Postives = 185/436 (42.43%), Query Frame = 0
Query:   98 AVLAEGVGTSILTLVIA---LVGSSLAGLTAGMQGLGTGAALLALILAGRSSSGADYNPIVTTALVLLGKMSLGMGLAYFASQVIGGLVGGAMAKILLG--PVGVLADPSFTLNPASIFARIFFSFAVVLTVLNAAMSKGGQDTWKHEEHFFAPALAVVV-----ALASTMGICLNPAAAWGI-FTAAGKSKGGVASWV-LSLLGAFPAMAVFRLADPDEAEMPTEHVSYFPKTLVGKEATRSIGPYVSECVGTFILTAVVTMALATGRVAAPLAAGAMVISLTLSQGHLSGAHFNPAVTIGLFVRKGSKAKDRQRVVGYIVAQILGALMAARMGS----LAFGNEVCHGKLLPLPVPGGSEGQAFGAEFLYTSLAIQTVLTLTGRTAPPSLLTP------IGVAAVFTASLMASQGLSGGSLNPAIATAMFLVNA 512
            A+ AE +GT  L   +A     GS++   TA          L+ ++      SG   NP VT AL    K        Y A+Q+  G+  G+ A  L G      LA       P + F    ++F +   VLN A SK   +     + FF  A+  V+     A     G C NPA A+G+ F++          W  + + GA  A   FR   P++  +    +S +  TL  K         VSE +GTF+L   V + +  G  +   +A A ++ +  + G +SGAHFNPAV++ + +R      D      YI  Q+L    A  + S    +  G +  H      P  G S  +A  AE ++T +    VL       P S LT       + +A+  TA   A+  LSGG LNPA++T + + ++
Sbjct:  255 AIFAEFLGTFALVFTVACCVATGSAVWNATA------IACVLMVMVYGTGPVSGGHLNPAVTLALAWSEKFPWEKVPVYCATQITAGIAAGSCAANLFGLETASPLAPVGEFTWPYAFFVEATYTFMLCFVVLNTAASKRNNEKGDGNQ-FFGLAIGFVIIAGGYASGDVSGACFNPAVAFGLDFSSINSGMSWGFGWTGMEIFGAGCAALAFRFVRPEDFSL--VELSTYEPTLPVK--------LVSEFLGTFMLVLTVGLNVVLGSASTAWSAAAALMCMIYALGDVSGAHFNPAVSLAVKLRGKCSWTD---FGTYIPVQLLAGASAGAIVSVFHKIGTGKDSAH---FLEPGKGHSVVEAGIAEMVFTFVLCYVVLATATIAKPGSQLTKQNFYFGLAIASCVTAGGFAAGALSGGELNPAVSTGLTVASS 667          
BLAST of NO17G00220 vs. NCBI_GenBank
Match: XP_022314459.1 (uncharacterized protein LOC111118999 [Crassostrea virginica])

HSP 1 Score: 101.7 bits (252), Expect = 8.100e-18
Identity = 149/498 (29.92%), Postives = 225/498 (45.18%), Query Frame = 0
Query:   96 MKAVLAEGVGTSILTLVIAL-VGSSLAGLTAGMQGLGTGAALLALILAGRSS-SGADYNPIVTTALVLLGKMSLGMGLAYFASQVIGGLVGGAMAKILLGPVGV---LADPSFTLNPA-----SIFARIFFSFAVVLTVLNAAMSKGGQDTWKHEEHFFAP-----ALAV-VVALASTMGICLNPAAAWGIFTAAGKS------KGGVASWVLSLLGAFPAMAVFRLADPDEAEMP-TEHVS-------YFPKTLVGKEAT-------RSIGPYVSECVGTFILTAVV-TMALATGRVAAPLAAGAMVISLTLSQGHLSGAHFNPAVTIGLFVRKGSKAKDRQRVVGYIVAQILG-----ALMAARMGSLAFGNEVCHGKLLPLPVPGGSE-GQAFGAEFLYTSLAIQTVLTLTGRTAPPSLLTP--IGVAAVFTASLMASQGLSGGSLNPAIA---TAMFLVNATGRQMQSLWVYWMAPVLASVVVGLGYRKMVGEE 545
            ++  LAE VG+++   V  + V ++  G  A   GL      +AL++AG    SG  +NP VT  + L G  S+   + YF SQ++GG+VG A A  +L P  V   +   + TL P      +I A    +F +V TVL  A+ +        E    AP     A+AV ++A A T G  +NPA + G   A  K       +     W     GA  A  V+++       M   E V             LVG + T         I P ++E VG+ IL  VV +M++    +   L  G  ++ L  S G++SG +FNPA+T+GL +   +        VGY VAQ+LG     AL+ A +    + N    G    L    G+E G    +E + T + + TVLT T        L P  IG + V T+S  A   L+GGS+NPA +      F V   G   +  ++YW+ P+L ++V  L ++ +   E
Sbjct:   20 IRPALAEFVGSTVFVFVGCMAVQTNDVGTIALAHGLA-----IALLIAGLGKISGGHFNPAVTLGVTLSGGCSIVASIFYFFSQILGGMVGAACALAVL-PESVYKGIQGGAHTLGPGVYPGWAILAEGILTFLLVFTVLLTAVDE--------ENSSLAPLAIGFAVAVDIIAGAKTTGASMNPARSLGPAVAYSKYLEVNVWEHHYVYWSGPTAGAIVAAVVYKILFASRRRMLFRERVQGRRGGKMAETDVLVGTQETGRFTFFESKIRPVLAEFVGSSILVFVVCSMSVNNFPLGDGLVYGFAMVFLIESLGNISGGYFNPAITLGLVI---TGPIGVCLAVGYFVAQVLGGMLGAALVRAVLPETQYKNLTFLGGCTVLNESNGAEPGWGVFSEAILTFILVLTVLT-TVANEKHCQLAPLCIGFSVVVTSS--AGSFLTGGSMNPARSFGPAVAFSVYDDGVVWKYHYIYWVGPLLGTLVACLLFKLVFAAE 497          
BLAST of NO17G00220 vs. NCBI_GenBank
Match: OLP87495.1 (Vacuolar amino acid transporter 3 [Symbiodinium microadriaticum])

HSP 1 Score: 99.4 bits (246), Expect = 4.000e-17
Identity = 116/408 (28.43%), Postives = 182/408 (44.61%), Query Frame = 0
Query:   99 VLAEGVGTSILTLVIALVGSSLAGLTAGMQGLGTGAALLALILAGRSSSGADYNPIVTTALVLLGKMSLGMGLAYFASQVIGGLVGGAMAKILLGP-VGVLAD-PSFTLNPASIFARIFFSFAVVLTVLNAAMSKGGQDTWKHEEHFFAPALAVVV-----ALASTMGICLNPAAAWGIFTAAGKSKGGVASW-VLSLLGAFPAMAVFRLADPDEAEMPTEHVSYFPKTLVGKEATRSIGPYVSECVGTFILTAVVTMALATGRVAAPLAAGAMVISLTLSQGHLSGAHFNPAVTIGLFVRKGSKAKDRQRVVGYIVAQILGALMAARM-GSLAFGNEVCHGKLLPLPVPGGSEGQAFGAEFLYTSLAIQTVLTL-TGRTAPPSLLTPIGVAAVFTASLMASQGLSGG 497
            + AEG+GT  L   +  V +S     +        + L+ +I A    SG   NP VT A+ LLGK S G  + Y+  Q +G     A+ KI+  P + V+A  P F    A+    + ++  +V  VL  A++K           F+  A+  VV     A+    G  LNPA +  +   +GK       W    L GA  A   +R+  P+E          F K+   +   ++    ++E  GTF+L   V + + +G  A   +A A ++ +  S G++SGAHFNPAVT+ + +  G +   R+   GYI AQI+G L+A  +  +   G+ V    +  +P  G    QA  AE + T      VL + T R      L  + +A+  T    A   +SGG
Sbjct:  520 LFAEGLGTFALVFTVGCVVTS--PTPSPWSATSIASVLMVMIYATGPISGGHLNPAVTFAMTLLGKKSFGGMVTYWLFQFMGAFTAAAVYKIVCAPHLAVVAPVPPFNAGYAA-GGELLYTAMLVFVVLCCAVAKKNT-----PNQFYGLAIGFVVLAGGHAVGRISGAALNPAVSLPLGLGSGKDPHWALVWFAAELAGAALAAGAYRVLRPEE----------FGKSTSDRPDLKT--RCLAEAFGTFMLVVTVGLNIVSGSRATAYSAAAALMCMIYSLGNVSGAHFNPAVTLAV-LAGGREKISRRDAGGYITAQIVGGLLAGCVYAAYHMGSAVADKSIKLVPGRGFDLAQASIAELITTMFLGYVVLCIATVREPYAKDLFGLVIASTVTGGSFAVGSVSGG 906          
BLAST of NO17G00220 vs. NCBI_GenBank
Match: WP_093577524.1 (MIP family channel protein [Geodermatophilus amargosae] >SFT33368.1 aquaporin Z [Geodermatophilus amargosae])

HSP 1 Score: 98.2 bits (243), Expect = 8.900e-17
Identity = 72/229 (31.44%), Postives = 118/229 (51.53%), Query Frame = 0
Query:  321 VGKEATR-SIGPYVSECVGTFILTAVVTMALATGR-----VAAPLAAGAMVISLTLSQGHLSGAHFNPAVTIGLFVRKGSKAKDRQRVVGYIVAQILGALMAARMGSLAFGNEVCHGKLLPLPVP--GGSEGQAFGAEFLYTSLAIQTVLTLTGRTAPPSLLTPIGVAAVFTASLMASQGLSGGSLNPAIATAMFLVNATGRQMQSLWVYWMAPVLASVVVGLGYRKMV 542
            +G+ A R ++  +V   +  F+ T+ V    ATG+     +   LA G  +++L  + GH+SG H NPAVT+GL V   ++         Y+VAQ+LG +  A     A+G+      +L    P  G S GQAF  E L T + +  V+++       S + P+ V     A++ A+  L+GG++NPA A   F  N    ++ SLW+Y +APV+  V+  L Y +++
Sbjct:   20 IGQNAGRAALTEFVGTAILVFVGTSTVVAGPATGKTLYELLGVVLAFGLTLVALAAALGHVSGCHLNPAVTLGLAV---TRRFPWPAAGAYVVAQLLGGIAGAAATWAAYGSAARDEAVLGATTPQEGVSVGQAFLVEALVTFILVLVVVSVATDDRAESAIAPVAVGFALAAAIFAAGPLTGGAVNPARA---FGPNLLAGELSSLWIYLLAPVVGGVLAALVYDRLL 242          
BLAST of NO17G00220 vs. NCBI_GenBank
Match: WP_018162525.1 (hypothetical protein [Smaragdicoccus niigatensis])

HSP 1 Score: 97.8 bits (242), Expect = 1.200e-16
Identity = 68/214 (31.78%), Postives = 105/214 (49.07%), Query Frame = 0
Query:  328 SIGPYVSECVGTFILTAVVTMALATGRVAAPLAAGAMVISLTLSQGHLSGAHFNPAVTIGLFVRKGSKAKDRQRVVGYIVAQILGALMAARMGSLAFGNEVCHGKLLPLPVPGGSEGQAFGAEFLYT-SLAIQTVLTLTGRTAPPSLLTPIGVAAVFTASLMASQGLSGGSLNPAIATAMFLVNATGRQMQSLWVYWMAPVLASVVVGLGYRKM 541
            S+  YV+E +GTF L   V  A+++G   APL  GA+++ +  + GH+SGAH+NPAV+I  FVR    A D   +  YIV+Q +G L+AA  G   F               G + G A   E L+T +LA   +   T +  P +    + +     A  +A  G+SG   NPA+A  +     T      +WVY +A ++   + G  +R +
Sbjct:    3 SVRKYVTEAIGTFFLVFTVITAVSSGSPLAPLGIGAVLMVMIYAGGHISGAHYNPAVSIAAFVRGRLSAPD---LGIYIVSQFIGGLLAAGAGKYLFNLTGAKANF-----TGAAVGHALLVEILFTFALAYVVLNVATSKDHPNNSFYGLAIGFTVAAGAIAVGGISGAVFNPAVAVGISTAGITA--WADIWVYLVAQIIGGALAGFAFRAL 206          
BLAST of NO17G00220 vs. NCBI_GenBank
Match: WP_029368772.1 (porin [Mycobacterium sp. UM_WWY])

HSP 1 Score: 97.1 bits (240), Expect = 2.000e-16
Identity = 74/213 (34.74%), Postives = 108/213 (50.70%), Query Frame = 0
Query:  332 YVSECVGTFILTAVVTMALATGRVAAPLAAGAMVISLTLSQGHLSGAHFNPAVTIGLFVRKGSKAKDRQRVVGYIVAQILGALMAARMGSLAFGNEVCHGKLLPLPVPGGSEGQAFGAEFLYTSLAIQTVLTL-TGRTAPPSLLTPIGVAAVFTASLMASQGLSGGSLNPAI---ATAMFLVNATGRQMQSLWVYWMAPVLASVVVGLGYRKM 541
            Y  E +GTF L   V   +  G V APLA GA+++ +  + GH+SG H+NPAVT+ + VR+    +D     GY  AQ++  L AA +      +   HG  L L    G  G AF AE L+T      VL + T +  P +    + +     A  +A  G+SGG+ NPA+     AM L+      + +LWVY  A +LA+V  GL +R +
Sbjct:   21 YAVEAIGTFFLVFTVGACVRGGGVLAPLAIGAVLMVMVYAGGHISGGHYNPAVTLAVLVRRRIGLRD---ACGYWAAQLVAGLAAALVVPAVIAD---HGPALVLT---GHIGAAFCAELLFTFALCFVVLNVATSKDHPDNSFYGLAIGFTVAAGAIAVGGISGGAFNPAVVFGGAAMGLL-----ALPTLWVYLAAQLLAAVAAGLAFRAL 219          
The following BLAST results are available for this feature:
BLAST of NO17G00220 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM27571.18.000e-5037.57major intrinsic protein [Nannochloropsis gaditana][more]
OLQ10684.11.000e-2027.97Chaperone protein dnaJ 2 [Symbiodinium microadriat... [more]
OLQ14241.14.300e-1927.13Aquaporin NIP2-1 [Symbiodinium microadriaticum][more]
OLP93687.12.800e-1828.37Aquaporin NIP2-1 [Symbiodinium microadriaticum][more]
OLQ14438.18.100e-1827.75Aquaporin NIP1-3 [Symbiodinium microadriaticum][more]
XP_022314459.18.100e-1829.92uncharacterized protein LOC111118999 [Crassostrea ... [more]
OLP87495.14.000e-1728.43Vacuolar amino acid transporter 3 [Symbiodinium mi... [more]
WP_093577524.18.900e-1731.44MIP family channel protein [Geodermatophilus amarg... [more]
WP_018162525.11.200e-1631.78hypothetical protein [Smaragdicoccus niigatensis][more]
WP_029368772.12.000e-1634.74porin [Mycobacterium sp. UM_WWY][more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniR005ncniR005Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO17G00220.1NO17G00220.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|561313gene_11191Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO17G00220.1NO17G00220.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO17G00220 ID=NO17G00220|Name=NO17G00220|organism=Nannochloropsis oceanica|type=gene|length=3190bp
CCCTGCTTGTATGTTTGTGTTGCTTGACCTCCGTAACGTCCACCATCGCT
GTCTCCTACAGCAGGCCAAGATGCTGGTTTTATTTTTGAACAGCCAGACC
TGATCATCCCCAGCACCAGCAGTTTTACTATTGAAATAGTAGTTGTATAA
CAGGAGGTCCTACGGGTTCTCATGGGGGAAAGCTTGTTCTGTTTGACTGC
TTTCGAGACATAGGAGCAAAAGCTGGCACGCATTATCTCCGTCTGAGCCG
GATGCATATCGGTTCAACAGGGGGAACAACTCTTGCTTCTGCCCGCTTGT
GCTTTGTTTGCCTCAATATCAAGGATTTCGAGCATTTCTCTTTGTCCACT
TAATGCTCGCGGATGGTGCTCTCAACCTTTTTGCCTTCCCCGAACCAGCA
CACAACACAGAGGCTCCGTTTCGACCTCCCCGTCCCCCTCTTCAACCTCG
CCCGACATTGTCGCTCTTATCGTTTCGGCAGCACCTCTCCGAAGGATGCG
CACGCTCAACACGCCTTTGTACATCTTCCTTAATACCTTGGCCCTGGCCG
CAGCCTTTGCACCGGCTGGCAGGTACCTTCGCCCTTCCTCGCCCCTAAGG
CTCGTTGGGCGACCCAAGgtaacagcacgtggtttgtgaggtgaagcact
ctcccactgtcttctgttgttcctcttcaaagccacccctttcagcaatc
taaaccccatcccacgtcttcatcgtagGTATCCTTGCCCATAGTGACCC
ATGCGGCCACTACTGCCTCCCCTCCTCCTGCCCAGCAGCGTCGCTACTCC
CTCCCCCTGCCCCTACCCCGCGTTCCATTCTTCCTCCACCGCCGCGGAGG
GATGGCCGCTGACGAGCGACCCACCGTAAGTGAGGATACCATGAAGGCAG
TCTTGGCCGAGGGCGTGGGTACGAGCATCTTGACACTTGTAATTGCGTTG
GTGGGTTCGTCCCTCGCGGGCCTGACAGCGGGAATGCAAGGCTTGGGAAC
AGGTGCTGCCCTGCTGGCCTTGATTCTCGCGGGGCGTTCCAGCAGTGGCG
CAGACTACAACCCCATTGTGACGACGGCGTTGGTCTTGCTGGGTAAGATG
TCGCTTGGGATGGGCCTGGCGTATTTTGCGTCCCAGgtatgtgtttggaa
aaatgggagggagggaggaagggagggaggaagggagggaggaagggatg
gagggatgggggaaaaatacctgcgagagacggcgattgaggcttttgtt
gaataggaatggagactgaggcctttcacagcacatccacggaaccacct
catcctccctccctccctccctccctccctggctcccgccgtccttcgtc
tccagGTAATTGGCGGCCTTGTGGGTGGAGCGATGGCAAAGATCCTCCTA
GGGCCAGTGGGAGTATTAGCGGATCCAAGCTTCACGTTAAACCCTGCTTC
CATCTTTGCAAGGATTTTCTTCTCGTTCGCTGTGGTTCTGACGGTGCTCA
ACGCCGCGATGTCGAAGGGGGGGCAGGACACGTGGAAGCACGAGGAGCAT
TTTTTTGCACCAGCCTTGGCGGTGGTGGTGGCGTTGGCTTCCACCATGGG
CATCTGCCTGAACCCGGCAGCGGCATGGGGTATCTTCACAGCCGCGGGAA
AGAGCAAGGGAGGCGTTGCCTCGTGGGTGCTCTCGCTCTTGGGAGCCTTC
CCCGCCATGGCGGTGTTTCGACTCGCAGACCCGGACGAGGCTGAGATGCC
GACAGAGCACGTGTCGTACTTTCCCAAGACGCTGGTGGGGAAGGAGGCGA
CCAGGTCCATCGGACCGTATGTGAGTGAATGCGTAGGCACCTTTATATTG
ACGGCCGTGGTGACTATGGCGCTGGCGACGGgtgagtaaaggagggaggg
agggagggagggcgggtatctcattttaccctgtttcgtatcatcgctgt
ctacactctcctgactgttttccccctctttcccccttcctcttctccct
ctcttctcgacctcgaacagGCCGAGTCGCGGCTCCCCTCGCCGCCGGTG
CGATGGTCATCTCCCTCACCCTCTCCCAAGGCCACCTGTCGGGGGCACAC
TTCAACCCCGCCGTGACCATCGGCCTGTTCGTAAGGAAAGGCTCTAAGGC
TAAGGATCGACAGAGGGTGGTCGGGTACATCGTGGCGCAGATCCTGGGAG
CGTTGATGGCAGCACGGATGGGTTCATTGGCCTTTGGAAACGAAGTGTGT
CATGGGAAGCTGTTGCCGCTGCCAGTGCCGGGCGGGAGTGAGGGACAAGC
GTTCGGAGCCGAGTTTCTCTATACATCATTAGCTATACAAACCGTCCTGA
CATTAACAGGACGGACGGCTCCCCCTTCTCTTCTCACGCCCATCGGGGTT
GCAGCGGTGTTCACCGCAAGCTTGATGGCATCGCAAGGCCTGAGCGGTGG
GTCGCTGAACCCAGCCATCGCCACTGCTATGTTCTTGGTGAACGCAACGG
GAAGGCAGATGCAGTCTTTGTGGGTGTATTGGATGGCGCCCGTGCTAGCC
TCGGTGGTGGTGGGCCTGGGGTATCGGAAGATGGTCGGGGAGGAGGGGGG
GGTGGAGGACGCAGTGGAGGGGGCGAAAAAATCGTGGGAAATGGCTGTGG
GGGAGGCCAAGGCGGCGTTTAAATCGACGGCAGTGTATAAGGAAGGGATA
AAAGGAGGGGAGGAGGGAGAGTAGACTGGATCTTGACACCGTCTTTAAGA
TTTCATTGTTAAATTTGTTTAAATTTGTCCAAGGTTGTTTATTTTTGAAT
GATTATGATTATTGGTCATTTGCTCTCCAGAGAAGAGGAGTGGCTCCATG
CGCCTCTTGGTCTTGAGGGTGGGTCGATGGGATAGCAAGGATTTACAGCG
GTTCGAGAAATGCCTGTTCAGTCATGGAAAGGGAGAAGAGGGCAAGAAAC
ACCGAGAGAGAGTGAGAGAGAAAGACAGAGAGAGAGAGAGATACCGAGAA
AGTATGCGAGAGAGAGGAAAGAGAAAGAGATAGAGAGACGAGAGAGAGGA
GGAGGAGAGAGAGAAAAAGAGCGGGGGAAAGAGATTTGAGGAAGAGAGAG
AGGATAATCAAAGGATGGTTAAAAAGGCTTGTGTGCAGAAAGAGGAGAGC
AGAGACTTCTCCAGTCGGCGACGCACACAGTACCGACGAC
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protein sequence of NO17G00220.1

>NO17G00220.1-protein ID=NO17G00220.1-protein|Name=NO17G00220.1|organism=Nannochloropsis oceanica|type=polypeptide|length=587bp
MRTLNTPLYIFLNTLALAAAFAPAGRYLRPSSPLRLVGRPKVSLPIVTHA
ATTASPPPAQQRRYSLPLPLPRVPFFLHRRGGMAADERPTVSEDTMKAVL
AEGVGTSILTLVIALVGSSLAGLTAGMQGLGTGAALLALILAGRSSSGAD
YNPIVTTALVLLGKMSLGMGLAYFASQVIGGLVGGAMAKILLGPVGVLAD
PSFTLNPASIFARIFFSFAVVLTVLNAAMSKGGQDTWKHEEHFFAPALAV
VVALASTMGICLNPAAAWGIFTAAGKSKGGVASWVLSLLGAFPAMAVFRL
ADPDEAEMPTEHVSYFPKTLVGKEATRSIGPYVSECVGTFILTAVVTMAL
ATGRVAAPLAAGAMVISLTLSQGHLSGAHFNPAVTIGLFVRKGSKAKDRQ
RVVGYIVAQILGALMAARMGSLAFGNEVCHGKLLPLPVPGGSEGQAFGAE
FLYTSLAIQTVLTLTGRTAPPSLLTPIGVAAVFTASLMASQGLSGGSLNP
AIATAMFLVNATGRQMQSLWVYWMAPVLASVVVGLGYRKMVGEEGGVEDA
VEGAKKSWEMAVGEAKAAFKSTAVYKEGIKGGEEGE*
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Synonyms
Publications