NO17G00140, NO17G00140 (gene) Nannochloropsis oceanica

Overview
NameNO17G00140
Unique NameNO17G00140
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2301
Alignment locationchr17:48505..50805 -

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr17genomechr17:48505..50805 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0001227DNA-binding transcription repressor activity, RNA polymerase II-specific
Vocabulary: Biological Process
TermDefinition
GO:0000122negative regulation of transcription by RNA polymerase II
Homology
BLAST of NO17G00140 vs. NCBI_GenBank
Match: EWM20509.1 (hypothetical protein Naga_100235g13 [Nannochloropsis gaditana])

HSP 1 Score: 234.2 bits (596), Expect = 5.900e-58
Identity = 138/266 (51.88%), Postives = 170/266 (63.91%), Query Frame = 0
Query:   30 DAPLGGRTQTVKTSANASSIFNYKTQVDFHRVKSTEQALMRRHATFTVMRTTGGLLGYFAKEEPVAQGQLDLAPLLDHCEISEARVPLSKEGRRRPVVGSLTISLRLRQPLKKVEMTTEETKTLVVGAWPEASNGRLSATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRFMEDLTELERNDPLNVSLLVSNDVLEYEISLLNSQNPERLDESEKTIRDAELNMKLNLLVLRVQREEITMEQYVSLLIERVKRDQL 296
            DAP  G T TV+T    ++ FN++ ++   R+ STE A  RR   F V R   GLL ++ +EE +  GQL LAPLL  C++ E  VPL+KEGRRRP+ GSLT+SLRL  PLK+ E+  EE +TLVVG W   S GRLS T                                       RF E+LTELER DPLN SLLVSNDVLE+E+SLL + NPE+L ESE+ IR+AELNMKLNLLVLRVQREEIT++QYVS L+ERVKRD++
Sbjct:   29 DAPHVGNTATVRTGLGHAADFNHRAKLPLPRLGSTEHACRRRSLNFLVRRRKKGLLKWWDEEETITHGQLSLAPLLSQCDLLEVSVPLAKEGRRRPMGGSLTVSLRLHHPLKEKEIAREEGRTLVVGPW---STGRLSPT------------------AASKEESQGLPEKERKDALAARFAEELTELEREDPLNASLLVSNDVLEHELSLLAASNPEKLLESERVIREAELNMKLNLLVLRVQREEITIDQYVSTLVERVKRDKV 273          
BLAST of NO17G00140 vs. NCBI_GenBank
Match: ETI38418.1 (hypothetical protein F443_15820 [Phytophthora parasitica P1569] >ETM38451.1 hypothetical protein L914_15229 [Phytophthora parasitica] >ETP08302.1 hypothetical protein F441_15653 [Phytophthora parasitica CJ01A1] >KUF77719.1 Coiled-coil and C2 domain-containing protein 1B [Phytophthora nicotianae])

HSP 1 Score: 78.2 bits (191), Expect = 5.400e-11
Identity = 83/308 (26.95%), Postives = 137/308 (44.48%), Query Frame = 0
Query:   32 PLGGRTQTVKTSAN---ASSIFNYKTQVDFH--RVKSTEQALMRRHATFTVMRTTGGLLGYFAKEEPVAQGQLDLAPLLDHCEISEARVPLSKEGRRRPVVGSLTISLRLRQPLKKVEMTTEETKTLVVGAWPEASNGRLSATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRFMEDLTELERNDPLNVSLLVSNDVLEYEISLLNSQNPERLDESEKTIRDA--ELNMKLNLLVLRVQREEITMEQYVSLLIERVKRDQLLALYQSKLGRRAQALRVMRRIKIMEEELKGAEGVEEE 333
            P  G+T   + + N   A+ I + +T+  F   R + T +    + A F V ++  G L  F   E VA+   +L PLL  CEI+  ++P      R+P  G + +++++R+PLK+ E   E  + LV+G +PE        +                                             T  E +DP ++ L+VS DV+  E+  + ++ P     +   + D    L +K  LL + +Q  ++T+E YV  L +R+  D++L        RR  A RV+ RIKIME+EL GA+G   E
Sbjct:  678 PHEGQTAEFQINPNAPFATKISSGQTEFVFKLARSRGTMRLFEIKKAVFEVWKS--GTL--FRNPELVARTYQELTPLLTCCEIN-TQLPF-LGSNRKPCGGDIEVAIQMRRPLKEKEFRQEAVEDLVIGDYPEP-----MVSTSEHLTMPSVTLEPSPTEANSLSSKNAAPNSDSSRSMMKEDQPASTTAELDDPHHLDLIVSYDVINEELEKVGTKLPSLTGPATIELNDRYDSLALKKQLLEIEMQTGKLTLEMYVERLHKRIAEDRILMSKLLSSNRRLDAARVLHRIKIMEKELVGADGDSAE 974          
BLAST of NO17G00140 vs. NCBI_GenBank
Match: ETK78620.1 (hypothetical protein L915_15376 [Phytophthora parasitica])

HSP 1 Score: 78.2 bits (191), Expect = 5.400e-11
Identity = 83/308 (26.95%), Postives = 137/308 (44.48%), Query Frame = 0
Query:   32 PLGGRTQTVKTSAN---ASSIFNYKTQVDFH--RVKSTEQALMRRHATFTVMRTTGGLLGYFAKEEPVAQGQLDLAPLLDHCEISEARVPLSKEGRRRPVVGSLTISLRLRQPLKKVEMTTEETKTLVVGAWPEASNGRLSATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRFMEDLTELERNDPLNVSLLVSNDVLEYEISLLNSQNPERLDESEKTIRDA--ELNMKLNLLVLRVQREEITMEQYVSLLIERVKRDQLLALYQSKLGRRAQALRVMRRIKIMEEELKGAEGVEEE 333
            P  G+T   + + N   A+ I + +T+  F   R + T +    + A F V ++  G L  F   E VA+   +L PLL  CEI+  ++P      R+P  G + +++++R+PLK+ E   E  + LV+G +PE        +                                             T  E +DP ++ L+VS DV+  E+  + ++ P     +   + D    L +K  LL + +Q  ++T+E YV  L +R+  D++L        RR  A RV+ RIKIME+EL GA+G   E
Sbjct:  678 PHEGQTAEFQINPNAPFATKISSGQTEFVFKLARSRGTMRLFEIKKAVFEVWKS--GTL--FRNPELVARTYQELTPLLTCCEIN-TQLPF-LGSNRKPCGGDIEVAIQMRRPLKEKEFRQEAVEDLVIGDYPEP-----MVSTSEHLTMPSVTLEPSPTEANSLSSKNAAPNSDSSRSMMKEDQPASTTAELDDPHHLDLIVSYDVINEELEKVGTKLPSLTGPATIELNDRYDSLALKKQLLEIEMQTGKLTLEMYVERLHKRIAEDRILMSKLLSSNRRLDAARVLHRIKIMEKELVGADGDSAE 974          
BLAST of NO17G00140 vs. NCBI_GenBank
Match: ETL32051.1 (hypothetical protein L916_15270 [Phytophthora parasitica] >ETO67191.1 hypothetical protein F444_15800 [Phytophthora parasitica P1976])

HSP 1 Score: 78.2 bits (191), Expect = 5.400e-11
Identity = 83/308 (26.95%), Postives = 137/308 (44.48%), Query Frame = 0
Query:   32 PLGGRTQTVKTSAN---ASSIFNYKTQVDFH--RVKSTEQALMRRHATFTVMRTTGGLLGYFAKEEPVAQGQLDLAPLLDHCEISEARVPLSKEGRRRPVVGSLTISLRLRQPLKKVEMTTEETKTLVVGAWPEASNGRLSATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRFMEDLTELERNDPLNVSLLVSNDVLEYEISLLNSQNPERLDESEKTIRDA--ELNMKLNLLVLRVQREEITMEQYVSLLIERVKRDQLLALYQSKLGRRAQALRVMRRIKIMEEELKGAEGVEEE 333
            P  G+T   + + N   A+ I + +T+  F   R + T +    + A F V ++  G L  F   E VA+   +L PLL  CEI+  ++P      R+P  G + +++++R+PLK+ E   E  + LV+G +PE        +                                             T  E +DP ++ L+VS DV+  E+  + ++ P     +   + D    L +K  LL + +Q  ++T+E YV  L +R+  D++L        RR  A RV+ RIKIME+EL GA+G   E
Sbjct:  678 PHEGQTAEFQINPNAPFATKISSGQTEFVFKLARSRGTMRLFEIKKAVFEVWKS--GTL--FRNPELVARTYQELTPLLTCCEIN-TQLPF-LGSNRKPCGGDIEVAIQMRRPLKEKEFRQEAVEDLVIGDYPEP-----MVSTSEHLTMPSVTLEPSPTEANSLSSKNAAPNSDSSRSMMKEDQPASTTAELDDPHHLDLIVSYDVINEELEKVGTKLPSLTGPATIELNDRYDSLALKKQLLEIEMQTGKLTLEMYVERLHKRIAEDRILMSKLLSSNRRLDAARVLHRIKIMEKELVGADGDSAE 974          
BLAST of NO17G00140 vs. NCBI_GenBank
Match: ETL85299.1 (hypothetical protein L917_15092 [Phytophthora parasitica])

HSP 1 Score: 78.2 bits (191), Expect = 5.400e-11
Identity = 83/308 (26.95%), Postives = 137/308 (44.48%), Query Frame = 0
Query:   32 PLGGRTQTVKTSAN---ASSIFNYKTQVDFH--RVKSTEQALMRRHATFTVMRTTGGLLGYFAKEEPVAQGQLDLAPLLDHCEISEARVPLSKEGRRRPVVGSLTISLRLRQPLKKVEMTTEETKTLVVGAWPEASNGRLSATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRFMEDLTELERNDPLNVSLLVSNDVLEYEISLLNSQNPERLDESEKTIRDA--ELNMKLNLLVLRVQREEITMEQYVSLLIERVKRDQLLALYQSKLGRRAQALRVMRRIKIMEEELKGAEGVEEE 333
            P  G+T   + + N   A+ I + +T+  F   R + T +    + A F V ++  G L  F   E VA+   +L PLL  CEI+  ++P      R+P  G + +++++R+PLK+ E   E  + LV+G +PE        +                                             T  E +DP ++ L+VS DV+  E+  + ++ P     +   + D    L +K  LL + +Q  ++T+E YV  L +R+  D++L        RR  A RV+ RIKIME+EL GA+G   E
Sbjct:  678 PHEGQTAEFQINPNAPFATKISSGQTEFVFKLARSRGTMRLFEIKKAVFEVWKS--GTL--FRNPELVARTYQELTPLLTCCEIN-TQLPF-LGSNRKPCGGDIEVAIQMRRPLKEKEFRQEAVEDLVIGDYPEP-----MVSTSEHLTMPSVTLEPSPTEANSLSSKNAAPNSDSSRSMMKEDQPASTTAELDDPHHLDLIVSYDVINEELEKVGTKLPSLTGPATIELNDRYDSLALKKQLLEIEMQTGKLTLEMYVERLHKRIAEDRILMSKLLSSNRRLDAARVLHRIKIMEKELVGADGDSAE 974          
BLAST of NO17G00140 vs. NCBI_GenBank
Match: ETP36356.1 (hypothetical protein F442_15662 [Phytophthora parasitica P10297])

HSP 1 Score: 78.2 bits (191), Expect = 5.400e-11
Identity = 83/308 (26.95%), Postives = 137/308 (44.48%), Query Frame = 0
Query:   32 PLGGRTQTVKTSAN---ASSIFNYKTQVDFH--RVKSTEQALMRRHATFTVMRTTGGLLGYFAKEEPVAQGQLDLAPLLDHCEISEARVPLSKEGRRRPVVGSLTISLRLRQPLKKVEMTTEETKTLVVGAWPEASNGRLSATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRFMEDLTELERNDPLNVSLLVSNDVLEYEISLLNSQNPERLDESEKTIRDA--ELNMKLNLLVLRVQREEITMEQYVSLLIERVKRDQLLALYQSKLGRRAQALRVMRRIKIMEEELKGAEGVEEE 333
            P  G+T   + + N   A+ I + +T+  F   R + T +    + A F V ++  G L  F   E VA+   +L PLL  CEI+  ++P      R+P  G + +++++R+PLK+ E   E  + LV+G +PE        +                                             T  E +DP ++ L+VS DV+  E+  + ++ P     +   + D    L +K  LL + +Q  ++T+E YV  L +R+  D++L        RR  A RV+ RIKIME+EL GA+G   E
Sbjct:  678 PHEGQTAEFQINPNAPFATKISSGQTEFVFKLARSRGTMRLFEIKKAVFEVWKS--GTL--FRNPELVARTYQELTPLLTCCEIN-TQLPF-LGSNRKPCGGDIEVAIQMRRPLKEKEFRQEAVEDLVIGDYPEP-----MVSTSEHLTMPSVTLEPSPTEANSLSSKNAAPNSDSSRSMMKEDQPASTTAELDDPHHLDLIVSYDVINEELEKVGTKLPSLTGPATIELNDRYDSLALKKQLLEIEMQTGKLTLEMYVERLHKRIAEDRILMSKLLSSNRRLDAARVLHRIKIMEKELVGADGDSAE 974          
BLAST of NO17G00140 vs. NCBI_GenBank
Match: XP_009538668.1 (hypothetical protein PHYSODRAFT_532802 [Phytophthora sojae] >EGZ05807.1 hypothetical protein PHYSODRAFT_532802 [Phytophthora sojae])

HSP 1 Score: 76.6 bits (187), Expect = 1.600e-10
Identity = 69/247 (27.94%), Postives = 107/247 (43.32%), Query Frame = 0
Query:   88 FAKEEPVAQGQLDLAPLLDHCEISEARVPLSKEGRRRPVVGSLTISLRLRQPLKKVEMTTEETKTLVVGAWPEASNGRLSATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRFMEDLTELERNDPLNVSLLVSNDVLEYEISLLNSQNPERLDES--EKTIRDAELNMKLNLLVLRVQREEITMEQYVSLLIERVKRDQLLALYQSKLGRRAQALRVMRRIKIMEEELKGAEGVEEE 333
            F   E VA+   +L PLL  CEI+   +P      R+P  G + I+L++R+PLK+ E   E  + LV+G + E      +                                                    +DP +V L+VS DV+  E+  L ++ P     +  E + R   L +K  LL + +Q  ++T+E YV  L  R+  D++L        RR  A RV+ R+KIME+EL+G EG  E+
Sbjct:  352 FRNPELVARAYQELTPLLTSCEIN-THIPF-LGSNRKPCGGDIEIALQMRRPLKERETRLETVEELVIGDYVEPVASSSNHVPMPSDQVAP------------------------------------PPASLDDPHHVDLIVSYDVMNEELEKLGAKLPSLTGPAAIELSDRHDSLTLKKQLLEIEMQTGKLTLEMYVERLHSRISADRVLVSQLLASNRRLDAARVLHRVKIMEKELEGTEGGSED 560          
BLAST of NO17G00140 vs. NCBI_GenBank
Match: POM71764.1 (Hypothetical protein PHPALM_11614 [Phytophthora palmivora var. palmivora])

HSP 1 Score: 75.5 bits (184), Expect = 3.500e-10
Identity = 84/315 (26.67%), Postives = 133/315 (42.22%), Query Frame = 0
Query:   40 VKTSANASSIFNYKTQVDFHRVKS-----TEQALMRRHATFTVMRTTGGLLGY---------------FAKEEPVAQGQLDLAPLLDHCEISEARVPLSKEGRRRPVVGSLTISLRLRQPLKKVEMTTEETKTLVVGAWPEASNGRLSATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRFMEDLTELERNDPLNVSLLVSNDVLEYEISLLNSQNPERLDES--EKTIRDAELNMKLNLLVLRVQREEITMEQYVSLLIERVKRDQLLALYQSKLGRRAQALRVMRRIKIMEEELKGAEGVEEE 333
            VK   N  S  +++ Q D   + S     TE    +R+ TF + R+ G +  +               F   E VA+   +L PLL  CEI    +P      R+P  G + I+L++R+PLK+ E+  E  + LV+G +PE      SA+                                             T    +DP ++ L+VS DV+  E+  + ++ P     +  E + R   L +K  LL + +Q  ++T++ YV  L +R+  D++L        RR  A RV+ RIKIME+EL G E    E
Sbjct:  642 VKFCLNFPSTSSHEGQTDEFTINSNASFATEIPPSQRNFTFKLARSRGTMRLFEIKKAIFEIWKPGTLFRNPELVARAYQELTPLLTCCEI-YTHIPF-LGSNRKPCGGDIEIALQMRRPLKEKELRVEVVEDLVIGDYPEPMT---SASQHVPMPNVVLDSMVKEDNSAS------------------------TTAALDDPHHIDLIVSYDVINEELEKVEAKLPSLTGSTAIEWSDRYDSLALKRQLLEIEMQTGKLTLDMYVERLHKRITEDRVLISQLLASNRRLDAARVLHRIKIMEKELVGTEDSSAE 927          
BLAST of NO17G00140 vs. NCBI_GenBank
Match: XP_008895398.1 (hypothetical protein PPTG_04841 [Phytophthora parasitica INRA-310] >ETN19565.1 hypothetical protein PPTG_04841 [Phytophthora parasitica INRA-310])

HSP 1 Score: 74.3 bits (181), Expect = 7.900e-10
Identity = 82/308 (26.62%), Postives = 136/308 (44.16%), Query Frame = 0
Query:   32 PLGGRTQTVKTSAN---ASSIFNYKTQVDFH--RVKSTEQALMRRHATFTVMRTTGGLLGYFAKEEPVAQGQLDLAPLLDHCEISEARVPLSKEGRRRPVVGSLTISLRLRQPLKKVEMTTEETKTLVVGAWPEASNGRLSATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRFMEDLTELERNDPLNVSLLVSNDVLEYEISLLNSQNPERLDESEKTIRDA--ELNMKLNLLVLRVQREEITMEQYVSLLIERVKRDQLLALYQSKLGRRAQALRVMRRIKIMEEELKGAEGVEEE 333
            P  G+T   + + N   A+ I + +T+  F   R + T +    + A F V ++  G L  F   E VA+   +L PLL  CEI+  ++P      R+P  G + +++++R+ LK+ E   E  + LV+G +PE        +                                             T  E +DP ++ L+VS DV+  E+  + ++ P     +   + D    L +K  LL + +Q  ++T+E YV  L +R+  D++L        RR  A RV+ RIKIME+EL GA+G   E
Sbjct:  678 PHEGQTAEFQINPNAPFATKISSGQTEFVFKLARSRGTMRLFEIKKAVFEVWKS--GTL--FRNPELVARTYQELTPLLTCCEIN-TQLPF-LGSNRKPCGGDIEVAIQMRRLLKEKEFRQEAVEDLVIGDYPEP-----MVSTSEHLTMPSVTLEPSPTEANSLSSKNAAPNSDSSRSMMKEDQPASTTAELDDPHHLDLIVSYDVINEELEKVGTKLPSLTGPATIELNDRYDSLALKKQLLEIEMQTGKLTLEMYVERLHKRIAEDRILMSKLLSSNRRLDAARVLHRIKIMEKELVGADGDSAE 974          
BLAST of NO17G00140 vs. NCBI_GenBank
Match: KFH69817.1 (hypothetical protein MVEG_04621 [Mortierella verticillata NRRL 6337])

HSP 1 Score: 73.6 bits (179), Expect = 1.300e-9
Identity = 125/345 (36.23%), Postives = 169/345 (48.99%), Query Frame = 0
Query:   35 GRTQTVKTSANASSIFNYKTQVDFHRVKSTEQALMRRHATFTVMRTTGGLLGYFAKEEPVAQGQLDLAPLLDHCEISEARVPLSKEGRRRPVVGSLTISLRLRQPLKKVEMTTEETKTLVV---------------GAWPEASN--------GRLSATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRFMEDL-----------------TELERN---DPLN-VSLLVSNDVLEYEISLLNSQ--------NPERLDESEKTIRDAELNMKLNLLVLRVQREEITMEQYVSLLIERVKRDQLLALYQSKLGRRAQALRVMRRIKIMEEELKGAE 328
            G T TVK ++     F +K  ++  R +  ++ + RR ATF V        G F     + + Q+ L PLLDH EI E   P+     RR   G + + + L++PL K E+  +E K LV+                + P+  N        GR +         XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                       T+ E++   D LN V LLVSN VLE EI     Q        N E  DE +  +   E+ MK  LLV++VQ  ++TME Y   +  RV +D+ LA+  ++LG R +A + M+R KIM  E+K  E
Sbjct:  574 GVTPTVKKTSQPD--FGFKKTLNIERTR-FQRFVERRKATFEVYH----YRGIFRASYLLGKVQVPLQPLLDHSEIHEV-FPIMDSNNRRSTGGKIELKITLQRPLLKPEIAVKEEKWLVIDEFNSGGLGFPSLLTASTPQPRNASATGSPLGRTTGAAAKSTRTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALVVKPEAVVAPSETQDEKDKALDELNSVELLVSNMVLEAEIQAAQDQIHNAKAVGNGEAADEYQDRLTQLEIKMK--LLVIQVQTGQLTMEAYCKTVNARVDKDKQLAIQLNRLGLRTEAAKAMKRFKIMAAEMKEVE 908          
The following BLAST results are available for this feature:
BLAST of NO17G00140 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 18
Match NameE-valueIdentityDescription
EWM20509.15.900e-5851.88hypothetical protein Naga_100235g13 [Nannochlorops... [more]
ETI38418.15.400e-1126.95hypothetical protein F443_15820 [Phytophthora para... [more]
ETK78620.15.400e-1126.95hypothetical protein L915_15376 [Phytophthora para... [more]
ETL32051.15.400e-1126.95hypothetical protein L916_15270 [Phytophthora para... [more]
ETL85299.15.400e-1126.95hypothetical protein L917_15092 [Phytophthora para... [more]
ETP36356.15.400e-1126.95hypothetical protein F442_15662 [Phytophthora para... [more]
XP_009538668.11.600e-1027.94hypothetical protein PHYSODRAFT_532802 [Phytophtho... [more]
POM71764.13.500e-1026.67Hypothetical protein PHPALM_11614 [Phytophthora pa... [more]
XP_008895398.17.900e-1026.62hypothetical protein PPTG_04841 [Phytophthora para... [more]
KFH69817.11.300e-936.23hypothetical protein MVEG_04621 [Mortierella verti... [more]

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Relationships

The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO17G00140.1NO17G00140.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO17G00140.1NO17G00140.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO17G00140 ID=NO17G00140|Name=NO17G00140|organism=Nannochloropsis oceanica|type=gene|length=2301bp
ATGGTTCCACCCAAGTTGCTCAGGGCGCTTCGATTGGTGGGAGGGAGGGA
GGGAGGGAGGGAGGGAGGGAGGGAGGGAGGAGGGGATgtaaggctgacag
gagaaaggtaggcgaagagggaggagaaaaggaagggagggaaggaagga
gggagggagggggggcatggaagagagggagggaaagaggaagagagaga
aggagggaaggagggttagagggggggagggagggagggagggagggaaa
gaggaagggaggaagggaagaagggagaggggaggaagggaggaaaggag
gagannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnccccagGACGCTCCTCTGGGCGGGCGCACGCAGACGGTCAAAACAA
GCGCCAATGCCTCGTCCATCTTCAACTACAAGACACAGgtatgcacctcc
ctccccccctccctcataccctgggaaaagaagagagacccactaccctt
cccccctccttccctccctccccgcagGTGGACTTCCACCGCGTCAAATC
GACGGAGCAAGCCCTGATGCGTCGGCATGCCACCTTCACCGTCATGAGGA
CCACGGGCGGCCTGCTCGGGTATTTCGCTAAGGAAGAACCCGTGGCACAG
GGACAGgtgcgtcctccctccctccctccctcgtttcctcccttcctcct
tccctaccgcctttcactcgccctttcttctgtaatccctccgtccatct
ggaggcagcaggtgacccatgtgcccctcctccctcccttcctccctccc
ttcctccctccctccctctctccctccctagCTGGATCTGGCCCCTCTAC
TCGACCATTGTGAGATCAGCGAAGCCCGAGTCCCGCTCTCCAAAGAAGGA
CGTCGAAGGCCCGTCGTCGGAAGTTTGACGgtaaggagggagggagggag
ggaaggagggaggggtcgacgctgcgcacgagagtcgcctgccgtattta
aactttctccctcccccttccttccttccttccttcccctccttcctttc
cttcctccctcccttcctccctctcttttctcagATTTCCCTCCGTCTGC
GCCAGCCCCTCAAGAAGGTCGAAATGACGACCGAGGAAACGAAGACTCTT
GTCGTGGGGGCATGGCCCGAGGCGAGgtagggagggagggagggatggag
ggatggagggagagaaggaagaccggaaggtcgtgccctaagcctgtaat
tactcaagcggttcctctcaattgacagTAATGGCCGACTTTCTGCAACC
GCAGCGCCCAAACAGGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGG
AGGAGGAGGAGGAGGAGGGGCCGGGGGAGGAAGCACAACAAGTGGCAAGG
AGGCAGCCATGATGAAGCGGTTCATGGAAGACCTGACAGAGCTGGAGCGG
AACGATCCACTCAAgtgcgtacatcctccctccctccctccctccctccc
ctccatccctccctccttccctcccctccctccctccctcccctcccatt
atttttacccaggacaatcgatactggtggtctgacccctccctccctcc
ctccctccctccctccctccctccctcgttctctcagTGTTTCCCTCCTG
GTCAGCAACGATGTACTCGAGTATGAAATCTCGCTCCTTAACTCCCAGAA
TCCCGAGCGGCTGGATGAGAGCGAGAAGACGATCAGAGACGCGGAGCTCA
ACATGAAGCTCAACCTGCTGgtaccaagggagggagggagggagggagga
aggaagggagggagggagggagggagggagggagggaggggtcagtgagt
acgttcccggtaatggtggcggttatgcctcccgtctcttcaggcttatt
cagatgctaccctttttcctccttcccctccctccttccctccctcagGT
CCTGCGGGTGCAGCGGGAGGAGATAACTATGGAGCAGTACGTGAGCTTGC
TCATCGAGAGGGTCAAACGCGACCAGgtctgcccgcccgccctccctccc
tctccccctccctccctccccccctcttgcccaaatgcatctccttttct
cactttctttcccccctccactcccactcagCTCCTCGCCCTTTACCAGA
GCAAGCTAGGCCGGAGAGCCCAAGCCCTCCGCGTTATGAGGAGGATCAAA
ATCATGGAGGAGGAGCTCAAGGGCGCAGAGGGAGTGGAGGAGGAGGGTTA
A
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protein sequence of NO17G00140.1

>NO17G00140.1-protein ID=NO17G00140.1-protein|Name=NO17G00140.1|organism=Nannochloropsis oceanica|type=polypeptide|length=334bp
MVPPKLLRALRLVGGREGGREGGREGGGDDAPLGGRTQTVKTSANASSIF
NYKTQVDFHRVKSTEQALMRRHATFTVMRTTGGLLGYFAKEEPVAQGQLD
LAPLLDHCEISEARVPLSKEGRRRPVVGSLTISLRLRQPLKKVEMTTEET
KTLVVGAWPEASNGRLSATAAPKQGGGGGGGGGGGGGGGGGGAGGGSTTS
GKEAAMMKRFMEDLTELERNDPLNVSLLVSNDVLEYEISLLNSQNPERLD
ESEKTIRDAELNMKLNLLVLRVQREEITMEQYVSLLIERVKRDQLLALYQ
SKLGRRAQALRVMRRIKIMEEELKGAEGVEEEG*
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Synonyms
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