NO16G01640, NO16G01640 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO16G01640 vs. NCBI_GenBank
Match: EWM23964.1 (ribosomal protein l14 [Nannochloropsis gaditana]) HSP 1 Score: 233.8 bits (595), Expect = 3.000e-58 Identity = 117/130 (90.00%), Postives = 125/130 (96.15%), Query Frame = 0 Query: 1 MVQLFTRFVEVGRVVLVNYGPDYGKLATVIDVVDGNKVLVEGPDSNVTRQVIPLKRVYLTDLKVKIPRNARAKTLKKAWATDKIVARWEQTTWCKKLEAKAKRAALTDFDRFKLMVARKEKAAIIKKHLK 131 MV+LFTRFVE+GRVVLVNYGPDYGKLAT+IDVVDGNK+LV+GPDS V RQVIPLKRV LTDLKVKIPRNAR KTLKKAWAT+KIVARWEQTTWCKKL AKAKRAALTDFDRFKLMVARKEK+AIIKKH+K Sbjct: 63 MVKLFTRFVEIGRVVLVNYGPDYGKLATIIDVVDGNKILVDGPDSGVLRQVIPLKRVSLTDLKVKIPRNAREKTLKKAWATEKIVARWEQTTWCKKLVAKAKRAALTDFDRFKLMVARKEKSAIIKKHVK 192
BLAST of NO16G01640 vs. NCBI_GenBank
Match: XP_009038235.1 (hypothetical protein AURANDRAFT_28296, partial [Aureococcus anophagefferens] >EGB06995.1 hypothetical protein AURANDRAFT_28296, partial [Aureococcus anophagefferens]) HSP 1 Score: 166.8 bits (421), Expect = 4.600e-38 Identity = 83/128 (64.84%), Postives = 104/128 (81.25%), Query Frame = 0 Query: 5 FTRFVEVGRVVLVNYGPDYGKLATVIDVVDGNKVLVEGP--DSNVTRQVIPLKRVYLTDLKVKIPRNARAKTLKKAWATDKIVARWEQTTWCKKLEAKAKRAALTDFDRFKLMVARKEKAAIIKKHLK 131 F+RFVEVGRVVL+NYGPD GKLAT+ID+VDGNK LV+GP + V RQVIP KRV LTD+ VKIP+NAR KTL KAW ++A+W+ ++W KKL AK KRA+LTDF RF+LMVARK+++AI+ +K Sbjct: 1 FSRFVEVGRVVLINYGPDEGKLATIIDIVDGNKCLVDGPATKTGVARQVIPFKRVALTDIVVKIPKNARQKTLNKAWDEADVLAKWDASSWAKKLAAKKKRASLTDFQRFQLMVARKQRSAIVAAKVK 128
BLAST of NO16G01640 vs. NCBI_GenBank
Match: XP_002287284.1 (RL14, ribosomal protein 14 60S large ribosomal subunit [Thalassiosira pseudonana CCMP1335] >EED94727.1 RL14, ribosomal protein 14 60S large ribosomal subunit [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 160.6 bits (405), Expect = 3.300e-36 Identity = 82/128 (64.06%), Postives = 104/128 (81.25%), Query Frame = 0 Query: 5 FTRFVEVGRVVLVNYGPDYGKLATVIDVVDGNKVLVEGPD--SNVTRQVIPLKRVYLTDLKVKIPRNARAKTLKKAWATDKIVARWEQTTWCKKLEAKAKRAALTDFDRFKLMVARKEKAAIIKKHLK 131 F+R+VEVGRVVL+ YGPD GKLATVIDVVD NK LV+GP+ + V RQVIP +R+ LTDL VKI R+ARAK LK AWA +A+WE ++W KKL+ K+KRAAL+DFDRFK+MVA+K+K+ II + +K Sbjct: 3 FSRYVEVGRVVLITYGPDAGKLATVIDVVDQNKCLVQGPEEITGVKRQVIPYRRIALTDLTVKIQRSARAKQLKAAWAEGDTLAKWEGSSWAKKLDGKSKRAALSDFDRFKVMVAKKQKSRIIAQKIK 130
BLAST of NO16G01640 vs. NCBI_GenBank
Match: CBJ28696.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 155.2 bits (391), Expect = 1.400e-34 Identity = 77/123 (62.60%), Postives = 94/123 (76.42%), Query Frame = 0 Query: 5 FTRFVEVGRVVLVNYGPDYGKLATVIDVVDGNKVLVEGPDSNVTRQVIPLKRVYLTDLKVKIPRNARAKTLKKAWATDKIVARWEQTTWCKKLEAKAKRAALTDFDRFKLMVARKEKAAIIKK 128 FTRFVE+GRVVLVNYGPD GKLA ++DV D NK L+EGPD+ V RQ+IP KR+ LTD K+ I RNAR T+K A + A+WE ++W KK K KRA +TDFDRFK+MVARK+K+AII K Sbjct: 3 FTRFVEIGRVVLVNYGPDEGKLAVILDVADNNKALIEGPDTGVPRQLIPFKRLALTDFKLPIQRNARIGTIKAAAKEADLYAKWEASSWAKKKAKKVKRAQMTDFDRFKVMVARKQKSAIIAK 125
BLAST of NO16G01640 vs. NCBI_GenBank
Match: GAX24814.1 (large subunit ribosomal protein L14e [Fistulifera solaris] >GAX17897.1 large subunit ribosomal protein L14e [Fistulifera solaris]) HSP 1 Score: 154.1 bits (388), Expect = 3.100e-34 Identity = 80/126 (63.49%), Postives = 97/126 (76.98%), Query Frame = 0 Query: 5 FTRFVEVGRVVLVNYGPDYGKLATVIDVVDGNKVLVEGPDSNVTRQVIPLKRVYLTDLKVKIPRNARAKTLKKAWATDKIVARWEQTTWCKKLEAKAKRAALTDFDRFKLMVARKEKAAIIKKHLK 131 F RF+EVGR+VL+NYGP+ GKLATVIDVVD NK L++GP + RQVI R+ LTDL VKI RNAR KTL KAW +A WE+++W KKL AK KRA+L DFDRFK+MVARK+K II+K +K Sbjct: 3 FQRFMEVGRIVLINYGPEAGKLATVIDVVDQNKCLIDGPQTG--RQVISFTRIALTDLTVKIQRNARPKTLAKAWEEAGTLAAWEKSSWAKKLIAKKKRASLNDFDRFKVMVARKQKREIIEKKMK 126
BLAST of NO16G01640 vs. NCBI_GenBank
Match: XP_008911987.1 (hypothetical protein PPTG_15525 [Phytophthora parasitica INRA-310] >ETI32112.1 hypothetical protein F443_20997 [Phytophthora parasitica P1569] >ETK72497.1 hypothetical protein L915_20399 [Phytophthora parasitica] >ETL25955.1 hypothetical protein L916_20259 [Phytophthora parasitica] >ETL79162.1 hypothetical protein L917_20132 [Phytophthora parasitica] >ETM37344.1 hypothetical protein L914_16090 [Phytophthora parasitica] >ETN02772.1 hypothetical protein PPTG_15525 [Phytophthora parasitica INRA-310] >ETO60854.1 hypothetical protein F444_21001 [Phytophthora parasitica P1976] >ETP01965.1 hypothetical protein F441_20864 [Phytophthora parasitica CJ01A1] >ETP30122.1 hypothetical protein F442_20805 [Phytophthora parasitica P10297] >KUF73668.1 60S ribosomal protein L14-2 [Phytophthora nicotianae]) HSP 1 Score: 152.5 bits (384), Expect = 8.900e-34 Identity = 79/125 (63.20%), Postives = 95/125 (76.00%), Query Frame = 0 Query: 5 FTRFVEVGRVVLVNYGPDYGKLATVIDVVDGNKVLVEGPDS--NVTRQVIPLKRVYLTDLKVKIPRNARAKTLKKAWATDKIVARWEQTTWCKKLEAKAKRAALTDFDRFKLMVARKEKAAIIKK 128 FTRFV +GRVVL+NYGPD GK+AT+IDVVD NK LV+GP S V R VI KR+ LTDL V IPR AR KTLKKA A +A+WE +TW KKL+ K RA L DFDRFK M+ARK+K++++KK Sbjct: 3 FTRFVSIGRVVLINYGPDAGKIATIIDVVDENKALVDGPFSVTGVNRHVINFKRLSLTDLTVDIPRQAREKTLKKALAKADTLAKWESSTWAKKLQNKKTRAELNDFDRFKAMIARKQKSSLVKK 127
BLAST of NO16G01640 vs. NCBI_GenBank
Match: XP_002186290.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >ACI65760.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 151.8 bits (382), Expect = 1.500e-33 Identity = 77/127 (60.63%), Postives = 98/127 (77.17%), Query Frame = 0 Query: 5 FTRFVEVGRVVLVNYGPDYGKLATVIDVVDGNKVLVEGPDS--NVTRQVIPLKRVYLTDLKVKIPRNARAKTLKKAWATDKIVARWEQTTWCKKLEAKAKRAALTDFDRFKLMVARKEKAAIIKKHL 130 F R+VE+GRVVL+NYGP+ GKLAT+ID+VD NK L++GP+S VTRQVI KR+ LTDLKV I RNAR K+L KAW + +WE ++W KKL A+ RA L+DFDRFK+MVA+K+K AII K + Sbjct: 3 FHRYVELGRVVLINYGPEAGKLATIIDIVDQNKCLIDGPESITGVTRQVISYKRLALTDLKVDIQRNARQKSLLKAWTEADTMNKWESSSWAKKLTARKTRAGLSDFDRFKVMVAKKQKTAIIAKKM 129
BLAST of NO16G01640 vs. NCBI_GenBank
Match: XP_009527839.1 (hypothetical protein PHYSODRAFT_286116 [Phytophthora sojae] >EGZ18781.1 hypothetical protein PHYSODRAFT_286116 [Phytophthora sojae]) HSP 1 Score: 151.4 bits (381), Expect = 2.000e-33 Identity = 80/125 (64.00%), Postives = 94/125 (75.20%), Query Frame = 0 Query: 5 FTRFVEVGRVVLVNYGPDYGKLATVIDVVDGNKVLVEGPDS--NVTRQVIPLKRVYLTDLKVKIPRNARAKTLKKAWATDKIVARWEQTTWCKKLEAKAKRAALTDFDRFKLMVARKEKAAIIKK 128 FTRFV VGRVVL+NYGPD GK+AT+IDVVD NK LV+GP S V R VI KR+ LTDL V IP AR KTLKKA A +A+WE +TW KKL+ K RA L DFDRFK M+ARK+K+A++KK Sbjct: 3 FTRFVSVGRVVLINYGPDAGKIATIIDVVDENKALVDGPFSVTGVNRHVINFKRLSLTDLTVDIPLQAREKTLKKALAKADTLAKWESSTWAKKLQNKKTRAELNDFDRFKAMIARKQKSALVKK 127
BLAST of NO16G01640 vs. NCBI_GenBank
Match: CCA20885.1 (60S ribosomal protein L14 putative [Albugo laibachii Nc14]) HSP 1 Score: 150.2 bits (378), Expect = 4.400e-33 Identity = 76/127 (59.84%), Postives = 92/127 (72.44%), Query Frame = 0 Query: 5 FTRFVEVGRVVLVNYGPDYGKLATVIDVVDGNKVLVEGPDS--NVTRQVIPLKRVYLTDLKVKIPRNARAKTLKKAWATDKIVARWEQTTWCKKLEAKAKRAALTDFDRFKLMVARKEKAAIIKKHL 130 FTRFV +GRV LVNYGPD GK+AT+IDV+D NK L++GP+S V RQVIP KR+ LTDL V++PR R KTLK+A IV +W T W KKL K RA DFDRFK M+ARK+K+ +IKK L Sbjct: 3 FTRFVTIGRVALVNYGPDCGKIATIIDVLDENKALIDGPESVTGVRRQVIPFKRLALTDLVVQVPRQPREKTLKQALQKGSIVEKWNNTAWAKKLSKKVTRAQCNDFDRFKTMIARKQKSTLIKKSL 129
BLAST of NO16G01640 vs. NCBI_GenBank
Match: OQS03429.1 (60S ribosomal protein L14 [Thraustotheca clavata]) HSP 1 Score: 150.2 bits (378), Expect = 4.400e-33 Identity = 79/127 (62.20%), Postives = 94/127 (74.02%), Query Frame = 0 Query: 5 FTRFVEVGRVVLVNYGPDYGKLATVIDVVDGNKVLVEGPDS--NVTRQVIPLKRVYLTDLKVKIPRNARAKTLKKAWATDKIVARWEQTTWCKKLEAKAKRAALTDFDRFKLMVARKEKAAIIKKHL 130 F+RFV +GRV L+NYGPD GKLAT+IDVVD NK LVEGP S V R VI KR+ LTDL VKIPR AR TLKKA I+ +W T W KK++AK RA L+DFDRFK M+ARK+K+++IKK L Sbjct: 3 FSRFVTIGRVALINYGPDAGKLATIIDVVDENKCLVEGPYSVTGVNRHVISFKRLALTDLTVKIPRQAREATLKKALVKADILNKWAATAWSKKIQAKKTRAGLSDFDRFKAMIARKQKSSLIKKQL 129 The following BLAST results are available for this feature:
BLAST of NO16G01640 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO16G01640 ID=NO16G01640|Name=NO16G01640|organism=Nannochloropsis oceanica|type=gene|length=853bpback to top protein sequence of NO16G01640.1 >NO16G01640.1-protein ID=NO16G01640.1-protein|Name=NO16G01640.1|organism=Nannochloropsis oceanica|type=polypeptide|length=131bpback to top Synonyms
Publications
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