NO16G01400, NO16G01400 (gene) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO16G01400
Unique Name	NO16G01400
Type	gene
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	4763
Alignment location	chr16:430065..434827 +

Link to JBrowse

Properties


Property Name	Value
Description	CCT domain containing protein

Mutants

Expression

Analysis:

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Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr16	genome	chr16:430065..434827 +

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
PRJNA769958	2024-08-13
GSE178672	2023-12-15
PRJNA933693	2023-10-26
PRJNA943449	2023-07-19
PXD016699	2021-01-08
GSE149904	2020-10-10
NoIMET1_WT_HS	2020-09-29
GSE139615	2020-03-11
PRJNA241382	2020-03-11
BLASTP analysis of N. oceanica IMET1 genes	2019-07-11
InterPro analysis for N. oceanica IMET1 genes	2019-07-11
PRJNA182180	2019-04-25
Gene prediction for N. oceanica IMET1	2017-10-24

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

Vocabulary: **INTERPRO**
Term	Definition
IPR010402	CCT_domain

Homology

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BLAST of NO16G01400 vs. NCBI_GenBank
Match: EWM23952.1 (CCT domain containing protein [Nannochloropsis gaditana])

HSP 1 Score: 350.1 bits (897), Expect = 1.400e-92
Identity = 326/625 (52.16%), Postives = 363/625 (58.08%), Query Frame = 0

Query:    1 MSTVAMSNQNRSKIGGGSGQDLLDGEFLGLSHSPPQFTPSSYETSHMHKRIRSGSISGRLRSASELEDKGIIDRMQKGALKNLIMSGDEHLLSALDKFSVEGDSTELHALLKSGALEGQPGLDLDLLMDDLDMNFLHLTSGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAENYQFDMDDMASFIAGDH----GVGAGSLVDD--LNLLVGGGVXXXXXGRSMSPGHGGSLSGLGFSPFGLDGGTGGGGSGTYFVTVKEDVPLQQGGRKGVGGGLGGKG-KVVKGPGLALSIKTKPPSXXXXXXXXXXXXXXXXXXXXPAGIQGLAIPRQS-QPSQTKGXXXXXXXXXXXXXXXXXXXXXXXXXLANKSHGAGAVKGINSNTNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPVPRASPSPSLSQAS-------ERDVNKHYIGAYSPESRRMRLEKFWDKKKNRIWDRKVKYDVRKNFADSRVRVKGRFVKKEDEAILIEVNTLTSKEGAMDAAPVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDLEEVEDGSEVAAGMEDLEDLLAPLEGL 611
            MS VAMS QNRSKI  GSGQD LDGEFLGLSHSPPQFTPSSYE SHM KRIRSGSISGRLRSASELE+KG+IDRMQKG LKNLIMSGDEHLL  LDKF  EGD++EL +LLKSG LEG+P LDL+LLMDDLDMNFL L+SG+                                  E+ QFDMDDMAS IAGD      VGAGS +++  L+ +VG        GRSMSP H  S    G SPF  +  +G GG   + V VK++ P    G        GGKG  V++G             XXXXXXXXXXXXXXXXXX    G+     PR S        XXXXXXXXXXXXXXXXXXXXXXXXX                   XXXXXXX                     XXXXXXXXXXXX        P +SP+ S++ ++       +RD NKHYIGAYSPESRR+RLEKFW+KKKNRIWDRKVKYDVRKNFADSRVRVKGRFVKKEDEAILIEVNTLTS+EGAM   P                                                          V     EDG  +A G+E+LEDLLAPL+GL
Sbjct:    1 MSAVAMSAQNRSKI--GSGQDTLDGEFLGLSHSPPQFTPSSYEASHMQKRIRSGSISGRLRSASELEEKGLIDRMQKGVLKNLIMSGDEHLLPVLDKFREEGDTSELRSLLKSGVLEGRPSLDLELLMDDLDMNFLQLSSGV-----------------------MGMGGALGGDGEHCQFDMDDMASLIAGDQAGQGSVGAGSFMEEELLSSMVG------VLGRSMSPSHSAS---FGLSPFAEE--SGSGGLPAFLVAVKDEAPPTLVGE-------GGKGAPVMRGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLSVGVPP---PRGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLASDALGPQSQPGAINPSEASXXXXXXXXXXXXMPVLQGNSPHSSPTGSINISTGAGGAEEKRDANKHYIGAYSPESRRLRLEKFWEKKKNRIWDRKVKYDVRKNFADSRVRVKGRFVKKEDEAILIEVNTLTSREGAM--TPGGGQENSSCLASGTAPSDSLATEGLHMGVGEGAILPGRGRKGSSSDLLPGLLLGKDELVLGGHEEDG--IAVGVEELEDLLAPLDGL 575

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BLAST of NO16G01400 vs. NCBI_GenBank
Match: CCI47728.1 (unnamed protein product [Albugo candida])

HSP 1 Score: 127.1 bits (318), Expect = 1.900e-25
Identity = 157/513 (30.60%), Postives = 208/513 (40.55%), Query Frame = 0

Query:    8 NQNRSKIGGGSGQDLLDGEFLG-LSHSPPQFTPSSYETSHMHKRIRSGSISGRLRSASELEDKGIIDRMQKGALKNLIMSGDEHLLSALDKFSVEGDSTELHALLKSGALEGQPGLDLDLLMDDLDMNFLHLTSGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAENYQFDMDDMASFIAGDHGVGAGSLVDDLNL-LVGGGVXXXXXGRSMSPGHGGSLSGLGFSP---FGLDGGTGGGGSGTYFVTVKEDVPLQQGGRKGVGGGLGGKGKVVKGPGLALSIKTKPPSXXXXXXXXXXXXXXXXXXXXPAGIQGLAIPRQSQPSQTKGXXXXXXXXXXXXXXXXXXXXXXXXXLANKSHGAGAVKGINSNTNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPVPRASPSPSLSQASERDVNK--HYIGAYSPESRRMRLEKFWDKKKNRIWDRKVKYDVRKNFADSRVRVKGRFVKKEDEAILIEVNTLT 514
            + NR    G  G D     FLG +SH+PP F+P S  T  M KR RSGSIS RL SAS+LE KG+ID  QKG +K+LI+SGDE L  AL+KF   GD+T L ALL SG L  +    +D+L DDLD+ FL++ S                                     N   D  D       + G+   S  D  +  L+ G       G S+S  +     GLG +P   FGL        S +     KE+  LQ+   +       G   V+K     L+                           P+  + + IP  S  S  +                            N    AGAV   N NT                                                V     S +++     D NK   ++GAYSPESR+ R++ F DK++ R+W ++VKYDVRKNFADSR+RVKGRFVKKEDE +L E+ + T
Sbjct:   60 HNNRKDTLGWIGDD-----FLGMISHTPPAFSPGSL-TMPMTKRGRSGSISSRLLSASDLEGKGLIDTKQKGVMKDLIISGDEALQKALEKFDA-GDTTSLEALLDSGRLNRRTS-SVDIL-DDLDLGFLNVGS---------------------LGDTPKHEDQFPPTTRNQTLDDWD-------ELGIFEPSFTDASSRDLMEGDFYGSSLGASLS--NSLPSLGLGITPPAVFGLGEEFLDSHSNSKKKIEKEE-RLQESKEQHRKRPQSGSKSVLKHGDTTLA--------SAMGNSLASMSLANSANNKPSSSRPIGIPGTSGGSSAR-----------------------THYAENSIAAAGAVPHANHNT------------------------------------------------VCNGITSVNVTGVRNNDTNKEQRFVGAYSPESRQKRIQNFLDKRQKRVWRKEVKYDVRKNFADSRLRVKGRFVKKEDEQLLRELMSFT 453

[Close]

BLAST of NO16G01400 vs. NCBI_GenBank
Match: CCI47729.1 (unnamed protein product [Albugo candida])

HSP 1 Score: 127.1 bits (318), Expect = 1.900e-25
Identity = 157/513 (30.60%), Postives = 208/513 (40.55%), Query Frame = 0

Query:    8 NQNRSKIGGGSGQDLLDGEFLG-LSHSPPQFTPSSYETSHMHKRIRSGSISGRLRSASELEDKGIIDRMQKGALKNLIMSGDEHLLSALDKFSVEGDSTELHALLKSGALEGQPGLDLDLLMDDLDMNFLHLTSGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAENYQFDMDDMASFIAGDHGVGAGSLVDDLNL-LVGGGVXXXXXGRSMSPGHGGSLSGLGFSP---FGLDGGTGGGGSGTYFVTVKEDVPLQQGGRKGVGGGLGGKGKVVKGPGLALSIKTKPPSXXXXXXXXXXXXXXXXXXXXPAGIQGLAIPRQSQPSQTKGXXXXXXXXXXXXXXXXXXXXXXXXXLANKSHGAGAVKGINSNTNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPVPRASPSPSLSQASERDVNK--HYIGAYSPESRRMRLEKFWDKKKNRIWDRKVKYDVRKNFADSRVRVKGRFVKKEDEAILIEVNTLT 514
            + NR    G  G D     FLG +SH+PP F+P S  T  M KR RSGSIS RL SAS+LE KG+ID  QKG +K+LI+SGDE L  AL+KF   GD+T L ALL SG L  +    +D+L DDLD+ FL++ S                                     N   D  D       + G+   S  D  +  L+ G       G S+S  +     GLG +P   FGL        S +     KE+  LQ+   +       G   V+K     L+                           P+  + + IP  S  S  +                            N    AGAV   N NT                                                V     S +++     D NK   ++GAYSPESR+ R++ F DK++ R+W ++VKYDVRKNFADSR+RVKGRFVKKEDE +L E+ + T
Sbjct:   51 HNNRKDTLGWIGDD-----FLGMISHTPPAFSPGSL-TMPMTKRGRSGSISSRLLSASDLEGKGLIDTKQKGVMKDLIISGDEALQKALEKFDA-GDTTSLEALLDSGRLNRRTS-SVDIL-DDLDLGFLNVGS---------------------LGDTPKHEDQFPPTTRNQTLDDWD-------ELGIFEPSFTDASSRDLMEGDFYGSSLGASLS--NSLPSLGLGITPPAVFGLGEEFLDSHSNSKKKIEKEE-RLQESKEQHRKRPQSGSKSVLKHGDTTLA--------SAMGNSLASMSLANSANNKPSSSRPIGIPGTSGGSSAR-----------------------THYAENSIAAAGAVPHANHNT------------------------------------------------VCNGITSVNVTGVRNNDTNKEQRFVGAYSPESRQKRIQNFLDKRQKRVWRKEVKYDVRKNFADSRLRVKGRFVKKEDEQLLRELMSFT 444

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BLAST of NO16G01400 vs. NCBI_GenBank
Match: XP_008613259.1 (hypothetical protein SDRG_09123 [Saprolegnia diclina VS20] >EQC33136.1 hypothetical protein SDRG_09123 [Saprolegnia diclina VS20])

HSP 1 Score: 121.3 bits (303), Expect = 1.000e-23
Identity = 146/495 (29.49%), Postives = 193/495 (38.99%), Query Frame = 0

Query:   23 LDGEFLG-LSHSPPQFTPSSYETSHMHKRIRSGSISGRLRSASELEDKGIIDRMQKGALKNLIMSGDEHLLSALDKFSVEGDSTELHALLKSGALEGQPGLDLDLLMDDLDMNFLHLTSGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAENYQFDMDDMASFIAGDHGVGAGSLVDDLNLLVGGGVXXXXXGRSMSPGHGGSLSGLGFSP---FGLDGGTGGGGSGTYFVTVKEDVPLQQGGRKGVGGGLGGKGKVVKGPGLALSIKTKPPSXXXXXXXXXXXXXXXXXXXXPAGIQGLAIPRQSQPSQTKGXXXXXXXXXXXXXXXXXXXXXXXXXLANKSHGAGAVKGINSNTNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPVPRASPSPSLSQASERDVNKHYIGAYSPESRRMRLEKFWDKKKNRIWDRKVKYDVRKNFADSRVRVKGRFVKKEDEAILIEVNTLT 514
            +  +F+G ++H+PP F+P S  T    KR RSGSISGRL SAS+LE+KG IDR QKG LK+LI+SGDE L  AL+ F  +GD T L ALL SGAL  +  +D   L+DDLD+ FL++ S                                   A     + D++        G    S +   +LL  G       G S+ P    S+ G+G +P   F          S     T  E+V  + G                       S+ T                        P GI G A    +QP                                  S   G + G+    N                                                            SE+   K ++GAYSPESRR R+EKF DK++ R+W ++VKYDVRKNFADSR+RVKGRFVKKEDE +L E+ + T
Sbjct:   42 ISDDFMGMINHTPPAFSPGSL-TLPSTKRNRSGSISGRLLSASDLEEKGFIDRYQKGVLKDLIISGDEKLQKALETFE-QGDPTALEALLDSGALNRKTSVD---LLDDLDLGFLNVGS-------------------------LGDTPKEEYTARQTLDEWDEI--------GFEPFSEITSRDLLEAGDFYSSSLGNSL-PNSLPSM-GMGITPPNAFSFADDFLDQSSKLSSPTSSENVKAEDGN---------------------ASMSTS----------------------RPIGIPGSA---ATQPR------------------------------LGASGFIGGMVGLGGGLND-----------------------------------------------------------SEK---KAFVGAYSPESRRKRVEKFLDKRQKRVWRKEVKYDVRKNFADSRLRVKGRFVKKEDEQLLRELLSFT 358

[Close]

BLAST of NO16G01400 vs. NCBI_GenBank
Match: XP_012200213.1 (hypothetical protein SPRG_06098 [Saprolegnia parasitica CBS 223.65] >KDO29043.1 hypothetical protein SPRG_06098 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 121.3 bits (303), Expect = 1.000e-23
Identity = 146/495 (29.49%), Postives = 194/495 (39.19%), Query Frame = 0

Query:   23 LDGEFLG-LSHSPPQFTPSSYETSHMHKRIRSGSISGRLRSASELEDKGIIDRMQKGALKNLIMSGDEHLLSALDKFSVEGDSTELHALLKSGALEGQPGLDLDLLMDDLDMNFLHLTSGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAENYQFDMDDMASFIAGDHGVGAGSLVDDLNLLVGGGVXXXXXGRSMSPGHGGSLSGLGFSP---FGLDGGTGGGGSGTYFVTVKEDVPLQQGGRKGVGGGLGGKGKVVKGPGLALSIKTKPPSXXXXXXXXXXXXXXXXXXXXPAGIQGLAIPRQSQPSQTKGXXXXXXXXXXXXXXXXXXXXXXXXXLANKSHGAGAVKGINSNTNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPVPRASPSPSLSQASERDVNKHYIGAYSPESRRMRLEKFWDKKKNRIWDRKVKYDVRKNFADSRVRVKGRFVKKEDEAILIEVNTLT 514
            +  +F+G ++H+PP F+P S  T    KR RSGSISGRL SAS+LE+KG IDR QKG LK+LI+SGDE L  AL+ F  +GD T L ALL SGAL  +  +D   L+DDLD+ FL++ S                                   A     + D++        G    S +   +LL  G       G S+ P    S+ G+G +P   F          S     T  E+V  + G                   G++ S                           P GI G A    +QP                                  S   G + G+    N                                                            SE+   K ++GAYSPESRR R+EKF DK++ R+W ++VKYDVRKNFADSR+RVKGRFVKKEDE +L E+ + T
Sbjct:   42 ISDDFMGMINHTPPAFSPGSL-TLPSTKRNRSGSISGRLLSASDLEEKGFIDRYQKGVLKDLIISGDEKLQKALETFE-QGDPTALEALLDSGALNRKTSVD---LLDDLDLGFLNVGS-------------------------LGDTPKEEYTARQTLDEWDEI--------GFEPFSEITSRDLLEAGDFYSSSLGNSL-PNSLPSM-GMGITPPNAFSFADDFLDQSSKLSSPTSSENVKAEDG-----------------SAGMSTS--------------------------RPIGIPGSA---ATQPR------------------------------LGASAFIGGMVGLGGGLND-----------------------------------------------------------SEK---KAFVGAYSPESRRKRVEKFLDKRQKRVWRKEVKYDVRKNFADSRLRVKGRFVKKEDEQLLRELLSFT 358

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BLAST of NO16G01400 vs. NCBI_GenBank
Match: OQR99859.1 (hypothetical protein THRCLA_06359 [Thraustotheca clavata])

HSP 1 Score: 120.9 bits (302), Expect = 1.300e-23
Identity = 142/492 (28.86%), Postives = 189/492 (38.41%), Query Frame = 0

Query:   23 LDGEFLG-LSHSPPQFTPSSYETSHMHKRIRSGSISGRLRSASELEDKGIIDRMQKGALKNLIMSGDEHLLSALDKFSVEGDSTELHALLKSGALEGQPGLDLDLLMDDLDMNFLHLTSGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAENYQFDMDDMASFIAGDHGVGAGSLVDDLNLLVGGGVXXXXXGRSMSPGHGGSLSGLGFSPFGLDGGTGGGGSGTYFVTVKEDVPLQQGGRKGVGGGLGGKGKVVKGPGLALSIKTKPPSXXXXXXXXXXXXXXXXXXXXPAGIQGLAIPRQSQPSQTKGXXXXXXXXXXXXXXXXXXXXXXXXXLANKSHGAGAVKGINSNTNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPVPRASPSPSLSQASERDVNKHYIGAYSPESRRMRLEKFWDKKKNRIWDRKVKYDVRKNFADSRVRVKGRFVKKEDEAILIEVNTLT 514
            +  +F+G +SH+PP F+P S  T    KR RSGSISGRL SAS+LE+KG IDR QKG LK+LI+SGDE L  AL+ F  +GD T L ALL SGAL  +  +D   L+DDLD+ FL++ S                                         + D+M        G    S +   +LL  G       G S+ P    S+ G+G +P             T F    + +                +   +  P  +  +KT+  +                    P GI G A    +QP                              L           GIN                                                                      K ++GAYSPESRR R+EKF DK++ R+W ++VKYDVRKNFADSR+RVKGRFVKKEDE +L E+ + T
Sbjct:   40 ISDDFMGMISHTPPAFSPGSL-TLPSTKRNRSGSISGRLLSASDLEEKGFIDRYQKGVLKDLIISGDEKLQKALETFE-QGDPTALEALLDSGALNRKTSVD---LLDDLDLGFLNVGS-------------------------LGDTPKEEYTTRQTLDEWDEM--------GFEPFSEITSRDLLEAGDFYSSSLGNSL-PNSLPSM-GMGITP------------PTAFSFADDFM---------------DQSNKLASPASSDKVKTEDHT--------------AVSTSRPIGIPGSA----AQP-----------------------------RLGTAFISGMVGLGINDTE------------------------------------------------------------------KKAFVGAYSPESRRKRVEKFLDKRQKRVWRKEVKYDVRKNFADSRLRVKGRFVKKEDEQLLRELLSFT 351

[Close]

BLAST of NO16G01400 vs. NCBI_GenBank
Match: XP_009822622.1 (hypothetical protein H257_01227 [Aphanomyces astaci] >ETV87759.1 hypothetical protein H257_01227 [Aphanomyces astaci])

HSP 1 Score: 119.8 bits (299), Expect = 3.000e-23
Identity = 139/484 (28.72%), Postives = 184/484 (38.02%), Query Frame = 0

Query:   30 LSHSPPQFTPSSYETSHMHKRIRSGSISGRLRSASELEDKGIIDRMQKGALKNLIMSGDEHLLSALDKFSVEGDSTELHALLKSGALEGQPGLDLDLLMDDLDMNFLHLTSGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAENYQFDMDDMASFIAGDHGVGAGSLVDDLNLLVGGGVXXXXXGRSMSPGHGGSLSGLGFSPFGLDGGTGGGGSGTYFVTVKEDVPLQQGGRKGVGGGLGGKGKVVKGPGLALSIKTKPPSXXXXXXXXXXXXXXXXXXXXPAGIQGLAIPRQSQPSQTKGXXXXXXXXXXXXXXXXXXXXXXXXXLANKSHGAGAVKGINSNTNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPVPRASPSPSLSQASERDVNKHYIGAYSPESRRMRLEKFWDKKKNRIWDRKVKYDVRKNFADSRVRVKGRFVKKEDEAILIEVNTLT 514
            ++H+PP F+P S  T    KR RSGSISGRL SAS+LE+KG IDR QKG LK+LI+SGDE L  AL+ F  +GD T L ALL SGAL  +  +D   L+DDLD+ FL++ S                                         D  D   F +    + +  L++   L      XXXXX   M                    G GG    + F   + D  L Q  + G  G               + IK +P                      P GI G A                                        + + +  + G  + T                                                             S+ D    ++GAYSP+SRR R+EKF DK++ R+W ++VKYDVRKNFADSR+RVKGRFVKKEDE +L E+ + T
Sbjct:   51 ITHTPPAFSPGSL-TLPSTKRNRSGSISGRLLSASDLEEKGFIDRYQKGVLKDLIISGDEKLQKALETFE-QGDPTALEALLDSGALNRKSSVD---LLDDLDLGFLNVGS--------------------------LGDTPKEDYTSRQTLDEWDEIGFDSAFADISSRDLMEGEYLXXXXXXXXXXXXXXM--------------------GLGGMTPPSSFSFAEHDF-LDQSSKLGADG---------------VKIKHEPSD---------------GLTSRPIGIPGAA----------------------------------------RLNASAFLSGTLNTT---------------------------------------------------------AGGLSDADKKAAFVGAYSPDSRRKRVEKFLDKRQKRVWRKEVKYDVRKNFADSRLRVKGRFVKKEDEQLLRELLSFT 355

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BLAST of NO16G01400 vs. NCBI_GenBank
Match: CCA20713.1 (conserved hypothetical protein [Albugo laibachii Nc14])

HSP 1 Score: 119.0 bits (297), Expect = 5.100e-23
Identity = 146/494 (29.55%), Postives = 199/494 (40.28%), Query Frame = 0

Query:   26 EFLG-LSHSPPQFTPSSYETSHMHKRIRSGSISGRLRSASELEDKGIIDRMQKGALKNLIMSGDEHLLSALDKFSVEGDSTELHALLKSGALEGQPGLDLDLLMDDLDMNFLHLTSGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAENYQFDMDDMASFIAGDHGVGAGSLVDDLNLLVGGGVXXXXXGRSMSPGHGGSLSGLGFSP---FGLDGGTGGGGSGTYFVTVKEDVPLQQGGRKGVGGGLGGKGKVVKGPGLALSIKTKPPSXXXXXXXXXXXXXXXXXXXXPAGIQGLAIPRQSQPSQTKGXXXXXXXXXXXXXXXXXXXXXXXXXLANKSHGAGAVKGINSNTNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPVPRASPSPSLSQASERDVNK--HYIGAYSPESRRMRLEKFWDKKKNRIWDRKVKYDVRKNFADSRVRVKGRFVKKEDEAILIEVNTLT 514
            +FLG +SH+PP F+P S  T  M KR RSGSIS RL SAS+LE KG+ID  QKG +K+LI+SGDE L  AL+KF   GD++ L ALL SG L  +    +D+L DDLD+ FL++ S                                   A      +DD       + G+   S  D    L+ G       G S+S  +     GLG +P   FGL        S +     KE+  +Q+               V+K    +LS                           P+G + + IP  S     +                            N       +   N NT                                                V     S +++     D NK   ++GAYSPESR+ R++ F DK++ R+W ++VKYDVRKNFADSR+RVKGRFVKKEDE +L E+ + T
Sbjct:   73 DFLGMISHTPPAFSPGSL-TMPMTKRGRSGSISSRLLSASDLEGKGLIDTKQKGVMKDLIISGDEALQKALEKFDA-GDTSSLEALLDSGRL-NRKSSSVDIL-DDLDLGFLNVGS-----------------------LGDTPKHEDQFPATTRNQTLDDW-----DELGIFEPSFTDASRDLMEGDFYGSSLGASLS--NSLPSLGLGITPPAVFGLGEEFLDSHSNSKKQIEKEE-RMQECKDHHRKRSQSASKSVLKHGDTSLS--------SVMGSSFASMELANSASSKPSGSRPIGIPGTSGGLSVRPHYG-----------------------ENSIAAGSGMPHANHNT------------------------------------------------VLNGLTSVNVTGVRSNDTNKEQRFVGAYSPESRQKRIQNFLDKRQKRVWRKEVKYDVRKNFADSRLRVKGRFVKKEDEQLLRELMSFT 452

[Close]

BLAST of NO16G01400 vs. NCBI_GenBank
Match: XP_008894362.1 (hypothetical protein PPTG_03439 [Phytophthora parasitica INRA-310] >XP_008894363.1 hypothetical protein, variant 1 [Phytophthora parasitica INRA-310] >XP_008894364.1 hypothetical protein, variant 2 [Phytophthora parasitica INRA-310] >ETI41309.1 hypothetical protein F443_13446 [Phytophthora parasitica P1569] >ETI41328.1 hypothetical protein F443_13439 [Phytophthora parasitica P1569] >ETI41329.1 hypothetical protein, variant 1 [Phytophthora parasitica P1569] >ETI41330.1 hypothetical protein, variant 2 [Phytophthora parasitica P1569] >ETK81370.1 hypothetical protein L915_13130 [Phytophthora parasitica] >ETK81371.1 hypothetical protein, variant 1 [Phytophthora parasitica] >ETK81372.1 hypothetical protein, variant 2 [Phytophthora parasitica] >ETL34799.1 hypothetical protein L916_13022 [Phytophthora parasitica] >ETL34800.1 hypothetical protein, variant 1 [Phytophthora parasitica] >ETL34801.1 hypothetical protein, variant 2 [Phytophthora parasitica] >ETL88046.1 hypothetical protein L917_12860 [Phytophthora parasitica] >ETL88047.1 hypothetical protein, variant 1 [Phytophthora parasitica] >ETL88048.1 hypothetical protein, variant 2 [Phytophthora parasitica] >ETM41293.1 hypothetical protein L914_12926 [Phytophthora parasitica] >ETM41294.1 hypothetical protein, variant 1 [Phytophthora parasitica] >ETM41295.1 hypothetical protein, variant 2 [Phytophthora parasitica] >ETN20425.1 hypothetical protein PPTG_03439 [Phytophthora parasitica INRA-310] >ETN20426.1 hypothetical protein, variant 1 [Phytophthora parasitica INRA-310] >ETN20427.1 hypothetical protein, variant 2 [Phytophthora parasitica INRA-310] >ETO69985.1 hypothetical protein F444_13508 [Phytophthora parasitica P1976] >ETO69986.1 hypothetical protein, variant 1 [Phytophthora parasitica P1976] >ETO69987.1 hypothetical protein, variant 2 [Phytophthora parasitica P1976] >ETP11081.1 hypothetical protein F441_13377 [Phytophthora parasitica CJ01A1] >ETP11082.1 hypothetical protein, variant 1 [Phytophthora parasitica CJ01A1] >ETP11083.1 hypothetical protein, variant 2 [Phytophthora parasitica CJ01A1] >ETP39226.1 hypothetical protein F442_13304 [Phytophthora parasitica P10297] >ETP39227.1 hypothetical protein, variant 1 [Phytophthora parasitica P10297] >ETP39228.1 hypothetical protein, variant 2 [Phytophthora parasitica P10297])

HSP 1 Score: 119.0 bits (297), Expect = 5.100e-23
Identity = 163/495 (32.93%), Postives = 206/495 (41.62%), Query Frame = 0

Query:   26 EFLG-LSHSPPQFTPSSYETSHMHKRIRSGSISGRLRSASELEDKGIIDRMQKGALKNLIMSGDEHLLSALDKFSVEGDSTELHALLKSGALEGQPGLDLDLLMDDLDMNFLHLTSGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAENYQFDMDDMASFIAGDHGVGAGSLVDDLNLLVGGGVXXXXXGRSMSPGHGGSL------SGLGFSPFGLDGGTGGGGSGTYFVTVKEDVPLQQGGRKGVGGGLGGKGKVVKGPGLALSIKTKPPSXXXXXXXXXXXXXXXXXXXXPAGIQGLAIPRQSQPSQTKGXXXXXXXXXXXXXXXXXXXXXXXXXLANKSHGAGAVKGINSNTNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPVPRASPSPSLSQASERDVNKHYIGAYSPESRRMRLEKFWDKKKNRIWDRKVKYDVRKNFADSRVRVKGRFVKKEDEAILIEVNTLT 514
            +FLG +SH+PP F+P S  T  M KR RSGSIS RL SAS+LE++G IDR QKG LK+LI+SGDE L  AL+KF   GD T L A+L SGAL  +    +DLL DDLD+ FL++ S                                     N   D  D   F +    V A  ++D               G   S   G SL       GLG +P           +G  F    ED                 + +V   PG+    K     XXXXXXXXXXXXXXXXXXXX        IP  +                                      GAGA                                                           A P   + +  +    ++++GAYSP+SRR R+EKF DK++ R+W ++VKYDVRKNFADSR+RVKGRFVKKEDE +L E+ + T
Sbjct:   51 DFLGMISHTPPAFSPGSL-TMPMTKRGRSGSISSRLLSASDLEERGYIDRYQKGVLKDLIISGDEALQKALEKFDA-GDPTTLEAMLDSGAL-NRKSSSIDLL-DDLDLGFLNVGS-----------------------LGDTPKDEFQSGGRNQSLDEWDELGFDSSFADVSARDILD---------------GEFYSSSLGASLPNSLPSMGLGITP----------PAGFSFA---EDFL---------------ENQVKTEPGIKSEGKNDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGIPGAA--------------------------------------GAGA-----------------------------------------------------------ARPFGGVDKGKDGQ-KQNFVGAYSPDSRRKRIEKFLDKRQKRVWRKEVKYDVRKNFADSRLRVKGRFVKKEDEQLLRELLSFT 377

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BLAST of NO16G01400 vs. NCBI_GenBank
Match: XP_008861661.1 (hypothetical protein H310_00600 [Aphanomyces invadans] >ETW10250.1 hypothetical protein H310_00600 [Aphanomyces invadans])

HSP 1 Score: 117.1 bits (292), Expect = 1.900e-22
Identity = 143/484 (29.55%), Postives = 182/484 (37.60%), Query Frame = 0

Query:   30 LSHSPPQFTPSSYETSHMHKRIRSGSISGRLRSASELEDKGIIDRMQKGALKNLIMSGDEHLLSALDKFSVEGDSTELHALLKSGALEGQPGLDLDLLMDDLDMNFLHLTSGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAENYQFDMDDMASFIAGDHGVGAGSLVDDLNLLVGGGVXXXXXGRSMSPGHGGSLSGLGFSPFGLDGGTGGGGSGTYFVTVKEDVPLQQGGRKGVGGGLGGKGKVVKGPGLALSIKTKPPSXXXXXXXXXXXXXXXXXXXXPAGIQGLAIPRQSQPSQTKGXXXXXXXXXXXXXXXXXXXXXXXXXLANKSHGAGAVKGINSNTNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPVPRASPSPSLSQASERDVNKHYIGAYSPESRRMRLEKFWDKKKNRIWDRKVKYDVRKNFADSRVRVKGRFVKKEDEAILIEVNTLT 514
            ++H+PP F+P S  T    KR RSGSISGRL SAS+LE+KG IDR QKG LK+LI+SGDE L  AL+ F  +GD T L ALL SGAL  +  +D   L+DDLD+ FL++ S                                         D  D   F +    +    L+D   L      XXXXX   M                    G GG    + F   + D  L Q  +   G   G K K     GL  + +                         P GI G A                                            A A      NT                                                        S    S+ +    ++GAYSP+SRR R+EKF DK++ R+W ++VKYDVRKNFADSR+RVKGRFVKKEDE +L E+ + T
Sbjct:   51 ITHTPPAFSPGSL-TLPSTKRNRSGSISGRLLSASDLEEKGFIDRYQKGVLKDLIISGDEKLQKALETFE-QGDPTALEALLDSGALNRKSSVD---LLDDLDLGFLNVGS--------------------------LGDTPKEDYTSRQTLDEWDEIGFDSAFADISNRDLMDGEYLXXXXXXXXXXXXXXM--------------------GLGGMTPPSSFSFAEHDF-LDQSSKLSTGAD-GVKVKAEPSDGLLSTTR-------------------------PIGIPGAA-----------------------------------------RLNASAFLSGTLNT--------------------------------------------------------SAGGLSDAEKKAAFVGAYSPDSRRKRVEKFLDKRQKRVWRKEVKYDVRKNFADSRLRVKGRFVKKEDEQLLRELLSFT 359

The following BLAST results are available for this feature:

BLAST of NO16G01400 vs. NCBI_GenBank

BLAST of NO16G01400 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20


Match Name	E-value	Identity	Description
EWM23952.1	1.400e-92	52.16	CCT domain containing protein [Nannochloropsis gad...	[more]
CCI47728.1	1.900e-25	30.60	unnamed protein product [Albugo candida]	[more]
CCI47729.1	1.900e-25	30.60	unnamed protein product [Albugo candida]	[more]
XP_008613259.1	1.000e-23	29.49	hypothetical protein SDRG_09123 [Saprolegnia dicli...	[more]
XP_012200213.1	1.000e-23	29.49	hypothetical protein SPRG_06098 [Saprolegnia paras...	[more]
OQR99859.1	1.300e-23	28.86	hypothetical protein THRCLA_06359 [Thraustotheca c...	[more]
XP_009822622.1	3.000e-23	28.72	hypothetical protein H257_01227 [Aphanomyces astac...	[more]
CCA20713.1	5.100e-23	29.55	conserved hypothetical protein [Albugo laibachii N...	[more]
XP_008894362.1	5.100e-23	32.93	hypothetical protein PPTG_03439 [Phytophthora para...	[more]
XP_008861661.1	1.900e-22	29.55	hypothetical protein H310_00600 [Aphanomyces invad...	[more]

Pages

Relationships

This gene is member of the following syntenic_region feature(s):


Feature Name	Unique Name	Species	Type
nonsL150	nonsL150	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ncniR018	ncniR018	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ngnoR031	ngnoR031	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region

This gene is orthologous to the following gene feature(s):


Feature Name	Unique Name	Species	Type
NSK003127	NSK003127	Nannochloropsis salina (N. salina CCMP1776)	gene

The following polypeptide feature(s) derives from this gene:


Feature Name	Unique Name	Species	Type
NO16G01400.1	NO16G01400.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following gene feature(s) are orthologous to this gene:


Feature Name	Unique Name	Species	Type
jgi.p\|Nanoce1779_2\|79913	gene_6022	Nannochloropsis oceanica (N. oceanica CCMP1779)	gene
Naga_100027g10	gene6482	Nannochloropsis gaditana (N. gaditana B-31)	gene

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
NO16G01400.1	NO16G01400.1	Nannochloropsis oceanica (N. oceanica IMET1)	mRNA

Sequences

The following sequences are available for this feature:

gene sequence
protein sequence

gene sequence

>NO16G01400 ID=NO16G01400|Name=NO16G01400|organism=Nannochloropsis oceanica|type=gene|length=4763bp
GAGAGGGAGGGAGGGAGGGAGGGAGGGAGGGTACCCAAATACCTGACTCA
AAATGACTTTGGGATCGATGATAAAGAGGCCTTGAAGAGCCACGTGGGTC
AACCATTTCATAGACGACATGTCGCACCACTCGCAAAATTTGACTGTCCG
TGAGATGGGTATCGTCCAATCGAACCACGCCCATGACCTTTTTCAGCAGG
AGCTCCGCGGCTTCGCCTTTCCCGTGGACGGTAGAGGGAACATACGTCGC
GGTGGGCATCTGATGAGTAAAAGGCGGCCGCAACAAGCCATGATAAAATC
ACGTGGTCTTTTCACTCACCACCGTCACGACAATGCTCCGGTCGTCGGGA
ACGATCGGAGCAGGTACATGGGGTTCCGTTTCGGAGGCGGTACCTGCTGG
AACGTTGGTGGCGTCCATTTCGCGGGAAACTTGGTGGCAAAAAAGCAAGG
TCCTCCGGCAATAAACAAACAATCAGCTAGGCTAGCACTACCAGGCTTTG
GCATTCTTGCGCTTTCATTCGAGTCCAACGGCATGTGCAAAAGCGCAATG
TTCTGTAGTAATGAGTGGGCCGGTCGCGCTTAAATTTCCCCAGAAATGGC
GTGAGAGAAAGTATCTTGATCTAATCTTGGCTGAGTGTGGTCTGTCGGCC
TTGAAGCATTACAAAGCGCGTGATGCGCATTTTTTAAATCTATTTAGTGG
GAGAGAGGAAATACTTCTACTCTGGACCAGAAGGCGCGGATTGGCGACGT
GCAGCACAAAAAACAGCAGAGTCCAACAGCGAGAGACTGACTTCTCTCCT
CGTGACGCCTCAGTGAAATAGGATTGGAGGGGCGCCCAGACCTGGAGAGC
GGTGTGTCATCTTTACTTTTCTTACTGATGTCCAACAAAGGTGTGGGACG
GCAGTAAAGAAAGAACGTAGCTTTAAGTAAGTTGGCCTTTTGGCTTGGAA
ACATACGAAGGGTCCATCAAATCACTGGGCAATCGCAATGTTTACACAGC
AGTCTTCACATCGAGAGCAAAGCGATGTGCTGCTCCTTCTTCCGTATGCG
TCATTATTTTCGCTTGGAAGACCTCAACCCGCACGGTCTCGTTCACTTGG
TCCTGCCAAGTCGCGTTTCTCACTTCCCTCTTTCCATCCTGTTTCTCAAC
CGCAAGCCTTTCCTAGGTACTGCCTTGTAGCCTCAGCGCCTCGCATTCGA
GGAGGAAAAGAGGGAGGAAGGAGCAAATCCCGAGCGACGAGCGAGACTAT
CAGTAAAACGAGGAGGACGCCGCTGCCCTCGTAAGTCGAAGATACCACCG
GTTTCCACCAGCAATCGCAGCCACGGCAAAATCTGCTTGGGGTACCACGT
ACGACCTGCGCCTCCCAGAACTTTCTTGCTGGAAATGTCGACGGTGGCCA
TGTCTAATCAAAACAGAAGCAAGATAGGAGGAGGCTCTGGGCAAGACCTC
CTCGATGGAGAATTCCTGGGCTTGAGTCATTCCCCACCCCAGTTTACGCC
CTCCAGTTACGAGACTTCGCACATGCACAAGgtaagcgaggaagggaggg
gggaaggaagggaggggaggaattggaggggattcagtgacggcggggtg
tgatgcgccagaggtaccgccggtgtacgatgcacaacattctgtcttat
ttgtcgtgtgcgtaagcgggaatgacagaggaagaaagagtgacagtttg
agtgccaattctgggttggaaaaacgtgcctcttttcatggatttcaggg
atcccatgggtcctgtgcggtgtgtggaaatatcgtatccggtctcatac
gttaaaagctctcgagcatcacgaaattttcatgcctagcatcttccaag
tctatcaagtgccagcacacacatcttaccaaagagatatttctgccacc
tcgcacattttctaaacccctctgtctctcctgccctccctccctccccc
ccctctccatctccccctccagCGCATCCGATCTGGCTCCATCTCCGGCC
GTCTACGCAGCGCCTCGGAGCTGGAGGACAAGGGCATCATTGATCGAATG
CAGAAAGGTGCACTCAAGAATTTGATCATGTCCGGCGACGAACACTTACT
CTCTGCCTTGGACAAATTTTCGGTGGAAGGCGACTCGACCGAGCTGCACG
CGTTGTTGAAATCTGGGGCATTGGAGGGACAGCCTGGCTTAGACCTTGAC
TTGTTGATGGACGACTTGGACATGAACTTTCTGCACCTTACCAGTGGCTT
GGGAGGGGGAGGGGGAGGAGTGGCTGGTGGTGCTGCGGGGACTGGAGGAG
TAGGAGGAGCGGGAGGGGGAGGGAGGGAGGGAGGGCATGGTGGGGGGGAG
GCGGAAAATTATCAGTTTGATATGGATGACATGGCGTCGTTCATCGCGGG
CGATCACGGGGTGGGTGCAGGGAGTTTGGTGGATGATCTGAACCTGTTGG
TGGGCGGAGGGGTTGGAGGAGGGATGGGGGGAAGGAGCATGAGCCCAGGA
CACGGGGGGTCCTTGTCGGGCTTGGGCTTCTCGCCGTTTGGATTGGATGG
CGGGACAGGGGGGGGAGGTTCGGGCACATATTTTGTGACAGTCAAGGAGG
ATGTGCCCCTGCAGCAGGGAGGAAGGAAGGGTGTGGGAGGAGGGCTGGGA
GGGAAGGGGAAGGTAGTGAAGGGGCCTGGGCTAGCGTTGTCGATCAAGAC
TAAGCCGCCATCAGGCTCGCCCTCCTCGTCCTCGTCCCCTTCCTCTATCC
CACCCTCCTCGTCTGCCTCAGGCCCGGCAGGTATTCAAGGCCTCGCCATC
CCTCGCCAATCCCAACCGTCACAAACGAAGGGACAGAAGAAGACAACTGC
CGCTGCTGCCGCTGCTGCTGCTTCGGTTGCCAACGTGGCAGCCACGGTTG
GTGCCGCGCTCGCCAACAAATCGCACGGTGCAGGCGCTGTCAAGGGCATC
AACAGCAACACCAACAGCAGCAATGGTGGTAAGATGAGCCCAACCCTTTC
AAACGCTGCAGGCATCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCT
CCTCCACGACCGCGTCCAGCGGTGGCGGCAATGGGGCGGCCTCCCTCCTC
ATGCCCGTCCCGCGTGCCAGTCCTTCTCCCTCTCTTTCCCAAGCCTCCGA
ACGGGACGTGAACAAGCACTATATTGGGGCTTACTCGCCCGAGTCCCGTC
GGATGCGCCTCGAGAAATTCTGGGACAAGAAGAAGAATCGCATTTGGGAT
CGAAAGGTGAAGTACGATGTGAGGAAAAATTTTGCGGATTCCCGGGTGCG
TGTGAAGGGCCGGTTTGTGAAGAAGGAGGATGAGGCTATTTTGATCGAGG
TAAATACGTTGACGAGCAAGGAGGGGGCGATGGACGCGGCGCCGGTGTCT
GCGGGGGGAGCAGGGGGAGGAGGGGGAGGAGTGGGGGACATGTCGGCAAG
CAGTTTGATGCCGGGGATGGGGGGGGGGAGGGAGGGAGCAGTGTTTCGGC
ATACGATGTTGCCGAGCAGTAGCAGTGGGGGTGGGGGAGGAAGTGGGATG
GTAATGCGGAAGGAGGAGGTAGATCTCGAGGAGGTCGAGGACGGGAGCGA
GGTGGCCGCGGGGATGGAGGACCTGGAAGACTTGCTGGCGCCACTGGAGG
GGCTGTAAAGGACGGAGGCAAGGGAGGAAGGGAGGAAGAGAGGGAGGGAT
ATTCAGAGGTGTGCAGTGAGTCATCAGCAGCGATTGTCTCGATCGTTGCG
CTTTTTGTTTTTACATACCCGGAAGACGCGCATTGCTTGCAATAGCAGCA
GCAGCAGCAGCATGAACATAGACAACATTTCAATCCATTTCCTTTAACAA
TTGACCTTTACATATGTTATATAAATATAAATATGCGTGGCTCTTTTTGA
GGAAGCGTACGTGTGTGCATGCGTGCTTACGTAAGCTAGTGGGTTGGGGT
CGAACTCTTTTCCCCTGTTCTCTTGTGTTAGGTTTGTGCATTCGGAAGGA
AGGATCATAATGAATGAGAGAGAAATAGAAAGAGAAGAGAGAGAAGAAGG
GGGGGTTACTTGAGGAAGAGACCAACCCCAGGAGGAGAAAATGTCGGCTG
TAGCCGGGTGGGAGGAAAAAGGCAGAAGCGAGAAGAGCAAGATCCCGCGA
TGGCGACCAGTTCAAGCAGCAAGTACGGGGAAGGCATTGCACTTTTACTC
ATTTCTCCATGCAACGCTTTTTATGATCCCCCATCCATTTACCCTTCCAA
ATAATTTCAATTTACTATTCAAATAATATTGAAAAAAAAGCCGCAAGTTA
AAAAACACTCAGATACGTGTGAGAGAAGAAAGAAGAGGAAAATTTCAATT
TCTTCTTTCACGGTAGGCGCCTTGAGTTGATTGAAGAGAAGAGAAGAGAA
AGAGACGAACAGCAAAGATTTGTGAGTAGAACTGCAAAGACGCAAGAATG
GAAAGGAACGCTGGGATGGCGAAGATCTACACAGAACAAGGAAGAGATGA
GAGTGGGCTCGGTGAGGAACAGGAGGACGGGCGACCGATAGAGGGCAAGC
AAGATATTTGAAATGACTATGACGATGAGGATGACAAGAGTAACAACAAC
GAGAAGCAGAACAAGAAGATCAAGACATCGGAAAATACGAAAAAGACGAG
TACGGAAAAAGAGGAACATTACGAAGAAGAAGACGACGAAGAAGAAAAGG
GAGAGGCAGAATTCGCTCACCAGTTGTGGACACTGATTCTCTTATCCCAT
CGCACCGAACAAG

protein sequence of NO16G01400.1

>NO16G01400.1-protein ID=NO16G01400.1-protein|Name=NO16G01400.1|organism=Nannochloropsis oceanica|type=polypeptide|length=611bp
MSTVAMSNQNRSKIGGGSGQDLLDGEFLGLSHSPPQFTPSSYETSHMHKR
IRSGSISGRLRSASELEDKGIIDRMQKGALKNLIMSGDEHLLSALDKFSV
EGDSTELHALLKSGALEGQPGLDLDLLMDDLDMNFLHLTSGLGGGGGGVA
GGAAGTGGVGGAGGGGREGGHGGGEAENYQFDMDDMASFIAGDHGVGAGS
LVDDLNLLVGGGVGGGMGGRSMSPGHGGSLSGLGFSPFGLDGGTGGGGSG
TYFVTVKEDVPLQQGGRKGVGGGLGGKGKVVKGPGLALSIKTKPPSGSPS
SSSSPSSIPPSSSASGPAGIQGLAIPRQSQPSQTKGQKKTTAAAAAAAAS
VANVAATVGAALANKSHGAGAVKGINSNTNSSNGGKMSPTLSNAAGISSS
SSSSSSSSSSTTASSGGGNGAASLLMPVPRASPSPSLSQASERDVNKHYI
GAYSPESRRMRLEKFWDKKKNRIWDRKVKYDVRKNFADSRVRVKGRFVKK
EDEAILIEVNTLTSKEGAMDAAPVSAGGAGGGGGGVGDMSASSLMPGMGG
GREGAVFRHTMLPSSSSGGGGGSGMVMRKEEVDLEEVEDGSEVAAGMEDL
EDLLAPLEGL*

Synonyms

Publications