NO16G00620, NO16G00620 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO16G00620 vs. NCBI_GenBank
Match: EWM24076.1 (Rna-dependent RNA polymerase [Nannochloropsis gaditana]) HSP 1 Score: 268.9 bits (686), Expect = 7.800e-68 Identity = 181/464 (39.01%), Postives = 234/464 (50.43%), Query Frame = 0 Query: 725 MDGDTYFVCMHKDIVSFARPIH----VQKMERSKSRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSEMLTVVGPFHFNAESVGLQVDAAVMKRCLESCMAHGKAHDIVASASDWWLRHADLRGACSSNCLILGEIAARALDSAKTGLLWSLPTVLKPAHRPSYLDRSGWSSSSXXXXXXXXXYHRVLSYSEVDTLLGRIHARVAPLLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAFISPADTLRLDSDLRVEGSAAFLEQAQSWLKAYRQSYARRMGRXXXXXXXXXXXXXXXXXXXG--EYQALKSEVLAPFKQAFLATARASGGDK----MTSA--NKRGDEEEGIGAGGEERRPLQLLADNTLPTKAEATVTVGDKNNENSRVPXXXXXXXXXXXXXXXXGNINSRFDRRRLAVASAIYEVTYMSGSTLSFVWDTVMHELNHVKKTALARRE 1177 MDGDTYFVCMH+ IV FA PI +K ++ G+E+LT +GPF + E+VG ++DA VM+RCLESC+A KA I+ASASDWW+RHAD+RGA S +C ILGEIA A++SAKTG LWSLP VL+P H P YL+R ++ R +S D+ LGR+++RV PL ++P D ++LD DLR+EGSAAF E AQSWLKAYRQS ARR R +YQA K+++L PF Q L A+ DK T A ++RG R+PLQ LA N +++++S++ N N + RRLA+ASAIYEVTYM GS L+FVWD VM ELN +KK ALARR+ Sbjct: 1 MDGDTYFVCMHEKIVEFACPIEDNGAPEKDTNICTKERHGKSKSDNEIFLSNQPDIPASKTIPPCPGAELLTQIGPFRLDPETVGHKIDAKVMRRCLESCVAQAKASQILASASDWWIRHADIRGALSRDCRILGEIAVGAVNSAKTGELWSLPRVLRPQHYPPYLNRYSAVDATSP--------SRPIS---ADSFLGRVYSRVLPLFLETSRQKSASLRSDDVGNT-----------------VAPLDPIKLDVDLRIEGSAAFFELAQSWLKAYRQSLARRARRSSRSTWRHHEKEQQRSQCDHNCQYQASKADILFPF-QKLLGAVAAARADKTNLTFTHAVLDRRGQ--------ARARQPLQALAANV-------------RSDDSSKIASQVPAARSRNDSITDIQNENCTLETRRLAMASAIYEVTYMGGSILNFVWDLVMPELNQLKKDALARRK 414
BLAST of NO16G00620 vs. NCBI_GenBank
Match: XP_023641477.1 (probable RNA-dependent RNA polymerase 5 isoform X2 [Capsella rubella]) HSP 1 Score: 149.4 bits (376), Expect = 6.900e-32 Identity = 159/656 (24.24%), Postives = 271/656 (41.31%), Query Frame = 0 Query: 275 GPMGMRGSSTFIHRAVGHDRFMRVQFGN---RRHWWSERGRHALQVLAQEGIHFACRRYKYINHK-----------SDRNGVCYFVAEDSTGK-EETGFRVMSAQCMIAGLGNFFNFPCVPRL---VARVALGFSRSQSLSLEPRQI--ELINDIFASEDSA-----------VMTDGSGFISPDLVSHLPPHLYQGRALPAAPLIGPSLAVPPFAVIQVRVICHMGGFKGTLLVHPRLQNKIQLRRSSMLKFPPPNLSVTPLTRRPSLDVLTTFRVLKAS-----TRLSRELVLILQALEVPDTVFIKLVEDELSLLRSACTDAEQAAALLRRSSSTLIRSSAEWQVAEMLKAGHGVNEAYIRKTLLGLRSRALVKLQQGRVFCPSSLYVVGQPDPLGVLKPDEVYVSHGLPTGYEGLPEGGTEDGVYEGKVLLARHPIYNPAHVQAFQAVKQPALQAFLGPRAGVLFFSVQGTPSPASRLSEGDMDGDTYFVCMHKDIVSFARPIH--VQKMERSKSRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSEMLTVVGPFHFNAESVGLQVDAAVMKRCLESCMAHGKAHDIVASASDWWL----RHADLRGACSSNCLILGEIAARALDSAKTGLLWSLPTVLKPAHRPSYLDR 889 GP+ + + T +H+ +G + + V+F N + + +A+ GI RRYK+ K S + CYF+ DST + + S + + +F + +P L +AR +L S+++ L ++ + E+I DI + + +DG+G+IS DL P ++Y+G+ L + + PP +IQ R+ + KGT L++ ++ ++ R SM+K P +L P++ T V+ S T+LSR LV +L +PD F+ ++ + L S + AAL S + +A A+M+ AG ++E +++ L R L+ GR+ S Y++G DP G LK DEV V E G G+VL+ R+P + + +A AL+ ++G +FF +G S ++ GD DGD YF+ + +++ +P V SKS + GP F+ E + ++ +K + G A D + D +L AD + L L +I ALD+ K G LP L+P P Y++R Sbjct: 234 GPL-LESTGTHLHKVLGDENVLTVKFANVQKNSSTYCSDSYFTYKGIAKNGIMVGLRRYKFFVFKDGGKDDKNKDVSTKRAKCYFIRTDSTASIDMEKPYIFSGKSIHEARMHFMHVHTLPSLANYMARFSLILSKTKKLEVDLTGVNFEIIKDIPCHDQDGKDVLDKNKKPRIHSDGTGYISEDLAQMCPVNIYKGKCLRSDKIKEACGQEPPL-LIQFRMFYNGYAIKGTFLLNKKIPSRTVQVRPSMIKVLPDSL--------PNISTFNTLEVVNTSFPPKRTKLSRNLVALLSYGGIPDEFFLDILHNTLE--ESKAIFYNKRAALNALSYGEMDDQNA----AQMILAGIPLDEPHLKTCLSSFLKREKNDLKAGRLPVTESYYLMGTVDPTGELKEDEVCVI--------------LESGQISGEVLVYRNPGLHFGDIHVLKATYVKALEEYVGNSKFAVFFPQKGPRSLGDEIAGGDFDGDIYFISRNPELLEHFKPSEPWVSLTPPSKSN-----------------------------------SARGPCQFSPEELEEELFEMFLKAGFHASNVIGMAADSWLTIMDRFLILGDESADEKAEMKQKMLELIDIYYDALDAPKKGAKVYLPNELRPDIFPHYMER 824
BLAST of NO16G00620 vs. NCBI_GenBank
Match: XP_006296906.1 (probable RNA-dependent RNA polymerase 5 isoform X1 [Capsella rubella] >EOA29804.1 hypothetical protein CARUB_v10012898mg [Capsella rubella]) HSP 1 Score: 149.1 bits (375), Expect = 9.000e-32 Identity = 157/656 (23.93%), Postives = 271/656 (41.31%), Query Frame = 0 Query: 275 GPMGMRGSSTFIHRAVGHDRFMRVQFGN---RRHWWSERGRHALQVLAQEGIHFACRRYKYINHK-----------SDRNGVCYFVAEDSTGK-EETGFRVMSAQCMIAGLGNFFNFPCVPRL---VARVALGFSRSQSLSLEPRQI--ELINDIFASEDSA-----------VMTDGSGFISPDLVSHLPPHLYQGRALPAAPLIGPSLAVPPFAVIQVRVICHMGGFKGTLLVHPRLQNKIQLRRSSMLKFPPPNLSVTPLTRRPSLDVLTTFRVLKAS-----TRLSRELVLILQALEVPDTVFIKLVEDELSLLRSACTDAEQAAALLRRSSSTLIRSSAEWQVAEMLKAGHGVNEAYIRKTLLGLRSRALVKLQQGRVFCPSSLYVVGQPDPLGVLKPDEVYVSHGLPTGYEGLPEGGTEDGVYEGKVLLARHPIYNPAHVQAFQAVKQPALQAFLGPRAGVLFFSVQGTPSPASRLSEGDMDGDTYFVCMHKDIVSFARPIH--VQKMERSKSRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSEMLTVVGPFHFNAESVGLQVDAAVMKRCLESCMAHGKAHDIVASASDWWL----RHADLRGACSSNCLILGEIAARALDSAKTGLLWSLPTVLKPAHRPSYLDR 889 GP+ + + T +H+ +G + + V+F N + + +A+ GI RRYK+ K S + CYF+ DST + + S + + +F + +P L +AR +L S+++ L ++ + E+I DI + + +DG+G+IS DL P ++Y+G+ L + + PP +IQ R+ + KGT L++ ++ ++ R SM+K P +L P++ T V+ S T+LSR LV +L +PD F+ ++ + L S + AAL +++ + A+M+ AG ++E +++ L R L+ GR+ S Y++G DP G LK DEV V E G G+VL+ R+P + + +A AL+ ++G +FF +G S ++ GD DGD YF+ + +++ +P V SKS + GP F+ E + ++ +K + G A D + D +L AD + L L +I ALD+ K G LP L+P P Y++R Sbjct: 233 GPL-LESTGTHLHKVLGDENVLTVKFANVQKNSSTYCSDSYFTYKGIAKNGIMVGLRRYKFFVFKDGGKDDKNKDVSTKRAKCYFIRTDSTASIDMEKPYIFSGKSIHEARMHFMHVHTLPSLANYMARFSLILSKTKKLEVDLTGVNFEIIKDIPCHDQDGKDVLDKNKKPRIHSDGTGYISEDLAQMCPVNIYKGKCLRSDKIKEACGQEPPL-LIQFRMFYNGYAIKGTFLLNKKIPSRTVQVRPSMIKVLPDSL--------PNISTFNTLEVVNTSFPPKRTKLSRNLVALLSYGGIPDEFFLDILHNTLE--ESKAIFYNKRAAL---NAALSYGEMDDQNAAQMILAGIPLDEPHLKTCLSSFLKREKNDLKAGRLPVTESYYLMGTVDPTGELKEDEVCVI--------------LESGQISGEVLVYRNPGLHFGDIHVLKATYVKALEEYVGNSKFAVFFPQKGPRSLGDEIAGGDFDGDIYFISRNPELLEHFKPSEPWVSLTPPSKSN-----------------------------------SARGPCQFSPEELEEELFEMFLKAGFHASNVIGMAADSWLTIMDRFLILGDESADEKAEMKQKMLELIDIYYDALDAPKKGAKVYLPNELRPDIFPHYMER 824
BLAST of NO16G00620 vs. NCBI_GenBank
Match: XP_023641478.1 (probable RNA-dependent RNA polymerase 5 isoform X3 [Capsella rubella]) HSP 1 Score: 149.1 bits (375), Expect = 9.000e-32 Identity = 157/656 (23.93%), Postives = 271/656 (41.31%), Query Frame = 0 Query: 275 GPMGMRGSSTFIHRAVGHDRFMRVQFGN---RRHWWSERGRHALQVLAQEGIHFACRRYKYINHK-----------SDRNGVCYFVAEDSTGK-EETGFRVMSAQCMIAGLGNFFNFPCVPRL---VARVALGFSRSQSLSLEPRQI--ELINDIFASEDSA-----------VMTDGSGFISPDLVSHLPPHLYQGRALPAAPLIGPSLAVPPFAVIQVRVICHMGGFKGTLLVHPRLQNKIQLRRSSMLKFPPPNLSVTPLTRRPSLDVLTTFRVLKAS-----TRLSRELVLILQALEVPDTVFIKLVEDELSLLRSACTDAEQAAALLRRSSSTLIRSSAEWQVAEMLKAGHGVNEAYIRKTLLGLRSRALVKLQQGRVFCPSSLYVVGQPDPLGVLKPDEVYVSHGLPTGYEGLPEGGTEDGVYEGKVLLARHPIYNPAHVQAFQAVKQPALQAFLGPRAGVLFFSVQGTPSPASRLSEGDMDGDTYFVCMHKDIVSFARPIH--VQKMERSKSRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSEMLTVVGPFHFNAESVGLQVDAAVMKRCLESCMAHGKAHDIVASASDWWL----RHADLRGACSSNCLILGEIAARALDSAKTGLLWSLPTVLKPAHRPSYLDR 889 GP+ + + T +H+ +G + + V+F N + + +A+ GI RRYK+ K S + CYF+ DST + + S + + +F + +P L +AR +L S+++ L ++ + E+I DI + + +DG+G+IS DL P ++Y+G+ L + + PP +IQ R+ + KGT L++ ++ ++ R SM+K P +L P++ T V+ S T+LSR LV +L +PD F+ ++ + L S + AAL +++ + A+M+ AG ++E +++ L R L+ GR+ S Y++G DP G LK DEV V E G G+VL+ R+P + + +A AL+ ++G +FF +G S ++ GD DGD YF+ + +++ +P V SKS + GP F+ E + ++ +K + G A D + D +L AD + L L +I ALD+ K G LP L+P P Y++R Sbjct: 209 GPL-LESTGTHLHKVLGDENVLTVKFANVQKNSSTYCSDSYFTYKGIAKNGIMVGLRRYKFFVFKDGGKDDKNKDVSTKRAKCYFIRTDSTASIDMEKPYIFSGKSIHEARMHFMHVHTLPSLANYMARFSLILSKTKKLEVDLTGVNFEIIKDIPCHDQDGKDVLDKNKKPRIHSDGTGYISEDLAQMCPVNIYKGKCLRSDKIKEACGQEPPL-LIQFRMFYNGYAIKGTFLLNKKIPSRTVQVRPSMIKVLPDSL--------PNISTFNTLEVVNTSFPPKRTKLSRNLVALLSYGGIPDEFFLDILHNTLE--ESKAIFYNKRAAL---NAALSYGEMDDQNAAQMILAGIPLDEPHLKTCLSSFLKREKNDLKAGRLPVTESYYLMGTVDPTGELKEDEVCVI--------------LESGQISGEVLVYRNPGLHFGDIHVLKATYVKALEEYVGNSKFAVFFPQKGPRSLGDEIAGGDFDGDIYFISRNPELLEHFKPSEPWVSLTPPSKSN-----------------------------------SARGPCQFSPEELEEELFEMFLKAGFHASNVIGMAADSWLTIMDRFLILGDESADEKAEMKQKMLELIDIYYDALDAPKKGAKVYLPNELRPDIFPHYMER 800
BLAST of NO16G00620 vs. NCBI_GenBank
Match: PTQ38911.1 (hypothetical protein MARPO_0048s0033 [Marchantia polymorpha]) HSP 1 Score: 147.5 bits (371), Expect = 2.600e-31 Identity = 136/490 (27.76%), Postives = 225/490 (45.92%), Query Frame = 0 Query: 282 SSTFIHRAVGHDRFMRVQF-----GNRRHWWSERGRHALQVLAQEGIHFACRRYKYINHKS--------DRNGVCYFVAEDSTGKEETGFRVMSAQCMIAGLGNFF----NFPCVPRLVARVALGFSRSQSLSLEPRQIELINDIFASEDSAVMTDGSGFISPDLVSHLPPHLYQGR--ALPAAPLIGPSLAVPPFAVIQVRVICHMGGFKGTLLVHPRL-QNKIQLRRSSMLKFPPPNLSVTPLTRRPSLDVLTTF---RVLKA--STRLSRELVLILQALEVPDTVFIKLVEDELSLLRSACTDAEQAAALLRRSSSTLIRSSAEWQVAE------MLKAGHGVNEAYIRKTLLGLRSRALVKLQQGRVFCPSSLYVVGQPDPLGVLKPDEVYVSHGLPTGYEGLPEGGTEDGVYEGKVLLARHPIYNPAHVQAFQAVKQPALQAFLGPRAGVLFFSVQGTPSPASRLSEGDMDGDTYFVCMHKDIVS 741 + + +HR +G D+ ++V F +R S+ LA+ GI CRRY+Y HK+ + N C+FV DS G+ + IA F + + +AR+ L S++ ++ L+ ++ + + + TDG+GFIS +L +P + GR P PSL+ QVRV+ +KGTLL L N I+L + SM K + + P + SL++++T R L+ + +LSR+L+++L VP + FI LV ++A D L+ + + EW+ + M+ A + E ++ ++LL + R L G+V P S Y++G DP G LK ++V + L +G VY K+L+ R P +P + F+A LQ +G V++FS QG A + +GD+DGD Y+VC + +VS Sbjct: 607 AKSLVHRTLGFDKVLKVAFEAEVEDGKRVPLSQDQYSMYCRLAKNGIFVGCRRYQYFAHKASDKFEKKMEGNVKCFFVCTDSRGEVDLRNPYFRRFNSIAEARTLFMHIHQTESIAKFIARMQLILSKTMTIDLDWTKVVVREKMDLQCQDGISTDGTGFISTNLARIIPTSILNGRQKTEPDRNEDYPSLS-------QVRVLYEGAAYKGTLLASEALPPNTIKLYK-SMKKVGRDDEVLLPSVK--SLEIVSTSQKPRKLQGVYTAKLSRDLIILLTTCGVPGSFFIDLV-------KAAIEDNH----LIFSDYNVAMNEVLEWETEKTEILLMMINARIPLTEPFLHRSLLDIVKRKLEDFTTGKVNLPESFYLMGTADPTGTLKRNQVAIV---------LSDG----PVYCPKLLVYRAPGKHPGDIHVFEATCNSVLQKVIGSGKYVIYFSTQGPRPIAEEIGKGDLDGDRYWVCKNTQLVS 1062
BLAST of NO16G00620 vs. NCBI_GenBank
Match: PTQ38912.1 (hypothetical protein MARPO_0048s0033 [Marchantia polymorpha]) HSP 1 Score: 147.5 bits (371), Expect = 2.600e-31 Identity = 136/490 (27.76%), Postives = 225/490 (45.92%), Query Frame = 0 Query: 282 SSTFIHRAVGHDRFMRVQF-----GNRRHWWSERGRHALQVLAQEGIHFACRRYKYINHKS--------DRNGVCYFVAEDSTGKEETGFRVMSAQCMIAGLGNFF----NFPCVPRLVARVALGFSRSQSLSLEPRQIELINDIFASEDSAVMTDGSGFISPDLVSHLPPHLYQGR--ALPAAPLIGPSLAVPPFAVIQVRVICHMGGFKGTLLVHPRL-QNKIQLRRSSMLKFPPPNLSVTPLTRRPSLDVLTTF---RVLKA--STRLSRELVLILQALEVPDTVFIKLVEDELSLLRSACTDAEQAAALLRRSSSTLIRSSAEWQVAE------MLKAGHGVNEAYIRKTLLGLRSRALVKLQQGRVFCPSSLYVVGQPDPLGVLKPDEVYVSHGLPTGYEGLPEGGTEDGVYEGKVLLARHPIYNPAHVQAFQAVKQPALQAFLGPRAGVLFFSVQGTPSPASRLSEGDMDGDTYFVCMHKDIVS 741 + + +HR +G D+ ++V F +R S+ LA+ GI CRRY+Y HK+ + N C+FV DS G+ + IA F + + +AR+ L S++ ++ L+ ++ + + + TDG+GFIS +L +P + GR P PSL+ QVRV+ +KGTLL L N I+L + SM K + + P + SL++++T R L+ + +LSR+L+++L VP + FI LV ++A D L+ + + EW+ + M+ A + E ++ ++LL + R L G+V P S Y++G DP G LK ++V + L +G VY K+L+ R P +P + F+A LQ +G V++FS QG A + +GD+DGD Y+VC + +VS Sbjct: 607 AKSLVHRTLGFDKVLKVAFEAEVEDGKRVPLSQDQYSMYCRLAKNGIFVGCRRYQYFAHKASDKFEKKMEGNVKCFFVCTDSRGEVDLRNPYFRRFNSIAEARTLFMHIHQTESIAKFIARMQLILSKTMTIDLDWTKVVVREKMDLQCQDGISTDGTGFISTNLARIIPTSILNGRQKTEPDRNEDYPSLS-------QVRVLYEGAAYKGTLLASEALPPNTIKLYK-SMKKVGRDDEVLLPSVK--SLEIVSTSQKPRKLQGVYTAKLSRDLIILLTTCGVPGSFFIDLV-------KAAIEDNH----LIFSDYNVAMNEVLEWETEKTEILLMMINARIPLTEPFLHRSLLDIVKRKLEDFTTGKVNLPESFYLMGTADPTGTLKRNQVAIV---------LSDG----PVYCPKLLVYRAPGKHPGDIHVFEATCNSVLQKVIGSGKYVIYFSTQGPRPIAEEIGKGDLDGDRYWVCKNTQLVS 1062
BLAST of NO16G00620 vs. NCBI_GenBank
Match: PTQ38913.1 (hypothetical protein MARPO_0048s0033 [Marchantia polymorpha]) HSP 1 Score: 147.5 bits (371), Expect = 2.600e-31 Identity = 136/490 (27.76%), Postives = 225/490 (45.92%), Query Frame = 0 Query: 282 SSTFIHRAVGHDRFMRVQF-----GNRRHWWSERGRHALQVLAQEGIHFACRRYKYINHKS--------DRNGVCYFVAEDSTGKEETGFRVMSAQCMIAGLGNFF----NFPCVPRLVARVALGFSRSQSLSLEPRQIELINDIFASEDSAVMTDGSGFISPDLVSHLPPHLYQGR--ALPAAPLIGPSLAVPPFAVIQVRVICHMGGFKGTLLVHPRL-QNKIQLRRSSMLKFPPPNLSVTPLTRRPSLDVLTTF---RVLKA--STRLSRELVLILQALEVPDTVFIKLVEDELSLLRSACTDAEQAAALLRRSSSTLIRSSAEWQVAE------MLKAGHGVNEAYIRKTLLGLRSRALVKLQQGRVFCPSSLYVVGQPDPLGVLKPDEVYVSHGLPTGYEGLPEGGTEDGVYEGKVLLARHPIYNPAHVQAFQAVKQPALQAFLGPRAGVLFFSVQGTPSPASRLSEGDMDGDTYFVCMHKDIVS 741 + + +HR +G D+ ++V F +R S+ LA+ GI CRRY+Y HK+ + N C+FV DS G+ + IA F + + +AR+ L S++ ++ L+ ++ + + + TDG+GFIS +L +P + GR P PSL+ QVRV+ +KGTLL L N I+L + SM K + + P + SL++++T R L+ + +LSR+L+++L VP + FI LV ++A D L+ + + EW+ + M+ A + E ++ ++LL + R L G+V P S Y++G DP G LK ++V + L +G VY K+L+ R P +P + F+A LQ +G V++FS QG A + +GD+DGD Y+VC + +VS Sbjct: 121 AKSLVHRTLGFDKVLKVAFEAEVEDGKRVPLSQDQYSMYCRLAKNGIFVGCRRYQYFAHKASDKFEKKMEGNVKCFFVCTDSRGEVDLRNPYFRRFNSIAEARTLFMHIHQTESIAKFIARMQLILSKTMTIDLDWTKVVVREKMDLQCQDGISTDGTGFISTNLARIIPTSILNGRQKTEPDRNEDYPSLS-------QVRVLYEGAAYKGTLLASEALPPNTIKLYK-SMKKVGRDDEVLLPSVK--SLEIVSTSQKPRKLQGVYTAKLSRDLIILLTTCGVPGSFFIDLV-------KAAIEDNH----LIFSDYNVAMNEVLEWETEKTEILLMMINARIPLTEPFLHRSLLDIVKRKLEDFTTGKVNLPESFYLMGTADPTGTLKRNQVAIV---------LSDG----PVYCPKLLVYRAPGKHPGDIHVFEATCNSVLQKVIGSGKYVIYFSTQGPRPIAEEIGKGDLDGDRYWVCKNTQLVS 576
BLAST of NO16G00620 vs. NCBI_GenBank
Match: PTQ38910.1 (hypothetical protein MARPO_0048s0033 [Marchantia polymorpha]) HSP 1 Score: 147.5 bits (371), Expect = 2.600e-31 Identity = 136/490 (27.76%), Postives = 225/490 (45.92%), Query Frame = 0 Query: 282 SSTFIHRAVGHDRFMRVQF-----GNRRHWWSERGRHALQVLAQEGIHFACRRYKYINHKS--------DRNGVCYFVAEDSTGKEETGFRVMSAQCMIAGLGNFF----NFPCVPRLVARVALGFSRSQSLSLEPRQIELINDIFASEDSAVMTDGSGFISPDLVSHLPPHLYQGR--ALPAAPLIGPSLAVPPFAVIQVRVICHMGGFKGTLLVHPRL-QNKIQLRRSSMLKFPPPNLSVTPLTRRPSLDVLTTF---RVLKA--STRLSRELVLILQALEVPDTVFIKLVEDELSLLRSACTDAEQAAALLRRSSSTLIRSSAEWQVAE------MLKAGHGVNEAYIRKTLLGLRSRALVKLQQGRVFCPSSLYVVGQPDPLGVLKPDEVYVSHGLPTGYEGLPEGGTEDGVYEGKVLLARHPIYNPAHVQAFQAVKQPALQAFLGPRAGVLFFSVQGTPSPASRLSEGDMDGDTYFVCMHKDIVS 741 + + +HR +G D+ ++V F +R S+ LA+ GI CRRY+Y HK+ + N C+FV DS G+ + IA F + + +AR+ L S++ ++ L+ ++ + + + TDG+GFIS +L +P + GR P PSL+ QVRV+ +KGTLL L N I+L + SM K + + P + SL++++T R L+ + +LSR+L+++L VP + FI LV ++A D L+ + + EW+ + M+ A + E ++ ++LL + R L G+V P S Y++G DP G LK ++V + L +G VY K+L+ R P +P + F+A LQ +G V++FS QG A + +GD+DGD Y+VC + +VS Sbjct: 157 AKSLVHRTLGFDKVLKVAFEAEVEDGKRVPLSQDQYSMYCRLAKNGIFVGCRRYQYFAHKASDKFEKKMEGNVKCFFVCTDSRGEVDLRNPYFRRFNSIAEARTLFMHIHQTESIAKFIARMQLILSKTMTIDLDWTKVVVREKMDLQCQDGISTDGTGFISTNLARIIPTSILNGRQKTEPDRNEDYPSLS-------QVRVLYEGAAYKGTLLASEALPPNTIKLYK-SMKKVGRDDEVLLPSVK--SLEIVSTSQKPRKLQGVYTAKLSRDLIILLTTCGVPGSFFIDLV-------KAAIEDNH----LIFSDYNVAMNEVLEWETEKTEILLMMINARIPLTEPFLHRSLLDIVKRKLEDFTTGKVNLPESFYLMGTADPTGTLKRNQVAIV---------LSDG----PVYCPKLLVYRAPGKHPGDIHVFEATCNSVLQKVIGSGKYVIYFSTQGPRPIAEEIGKGDLDGDRYWVCKNTQLVS 612
BLAST of NO16G00620 vs. NCBI_GenBank
Match: OAE30264.1 (hypothetical protein AXG93_2956s1150 [Marchantia polymorpha subsp. ruderalis]) HSP 1 Score: 141.7 bits (356), Expect = 1.400e-29 Identity = 136/504 (26.98%), Postives = 225/504 (44.64%), Query Frame = 0 Query: 282 SSTFIHRAVGHDRFMRVQF-----GNRRHWWSERGRHALQVLAQEGIHFACRRYKYINHKS--------DRNGVCYFVAEDSTGKEETGFRVMSAQCMIAGLGNFF----NFPCVPRLVARVALGFSRSQSLSLEPRQIELINDIFASEDSAVMTDGSGFISPDLVSHLPPHLYQGR--ALPAAPLIGPSLAVPPFAVIQVRVICHMGGFKGTLLVHPRL-QNKIQLRRSSMLKFPPPNLSVTPLTRRPSLDVLTTF-----------------RVLKA--STRLSRELVLILQALEVPDTVFIKLVEDELSLLRSACTDAEQAAALLRRSSSTLIRSSAEWQVAE------MLKAGHGVNEAYIRKTLLGLRSRALVKLQQGRVFCPSSLYVVGQPDPLGVLKPDEVYVSHGLPTGYEGLPEGGTEDGVYEGKVLLARHPIYNPAHVQAFQAVKQPALQAFLGPRAGVLFFSVQGTPSPASRLSEGDMDGDTYFVCMHKDIVS 741 + + +HR +G D+ ++V F +R S+ LA+ GI CRRY+Y HK+ + N C+FV DS G+ + IA F + + +AR+ L S++ ++ L+ ++ + + + TDG+GFIS +L +P + GR P PSL+ QVRV+ +KGTLL L N I+L + SM K + + P + SL++++T R L+ + +LSR+L+++L VP + FI LV ++A D L+ + + EW+ + M+ A + E ++ ++LL + R L G+V P S Y++G DP G LK ++V + L +G VY K+L+ R P +P + F+A LQ +G V++FS QG A + +GD+DGD Y+VC + +VS Sbjct: 565 AKSLVHRTLGFDKVLKVAFEAEVEDGKRVPLSQDQYSMYCRLAKNGIFVGCRRYQYFAHKASDKFEKKMEGNVKCFFVCTDSRGEVDLRNPYFRRFNSIAEARTLFMHIHQTESIAKFIARMQLILSKTMTIDLDWTKVVVREKMDLQCQDGISTDGTGFISTNLARIIPTSILNGRQKTEPDRNEDYPSLS-------QVRVLYEGAAYKGTLLASEALPPNTIKLYK-SMKKVGRDDEVLLPSVK--SLEIVSTRFYTALNIMICSWNSQKPRKLQGVYTAKLSRDLIILLTTCGVPGSFFIDLV-------KAAIEDNH----LIFSDYNVAMNEVLEWETEKTEILLMMINARIPLTEPFLHRSLLDIVKRKLEDFTTGKVNLPESFYLMGTADPTGTLKRNQVAIV---------LSDG----PVYCPKLLVYRAPGKHPGDIHVFEATCNSVLQKVIGSGKYVIYFSTQGPRPIAEEIGKGDLDGDRYWVCKNTQLVS 1034
BLAST of NO16G00620 vs. NCBI_GenBank
Match: XP_006408908.1 (probable RNA-dependent RNA polymerase 5 isoform X1 [Eutrema salsugineum] >ESQ50361.1 hypothetical protein EUTSA_v10001897mg [Eutrema salsugineum]) HSP 1 Score: 139.8 bits (351), Expect = 5.500e-29 Identity = 160/651 (24.58%), Postives = 278/651 (42.70%), Query Frame = 0 Query: 275 GPMGMRGSSTFIHRAVGHDRFMRVQFGN---RRHWWSERGRHALQVLAQEGIHFACRRYKYINHKS----------DRNGV-CYFVAEDSTGKEETG-FRVMSAQCMIAGLGNFFN---FPCVPRLVARVALGFSRSQSLSLEPRQI--ELINDIFA-----------SEDSAVMTDGSGFISPDLVSHLPPHLYQGRALPAAPLIGPSLAVPPFAVIQVRVICHMGGFKGTLLVHPRLQNKIQLRRSSMLKFPPPNLSVTPLTRRPSLDVLTTFRVLKASTRLSRELVLILQALEVPDTVFIKLVEDELSLLRSACTDAEQAAALLRRSSSTLIRSSAEWQVAEMLKAGHGVNEAYIRKTLLGLRSRALVKLQQGRVFCPSSLYVVGQPDPLGVLKPDEVYVSHGLPTGYEGLPEGGTEDGVYEGKVLLARHPIYNPAHVQAFQAVKQPALQAFLGPRAGVLFFSVQGTPSPASRLSEGDMDGDTYFVCMHKDIVSFARPIH--VQKMERSKSRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSEMLTVVGPFHFNAESVGLQVDAAVMKRCLESCMAHGKAHDIVASASDWWL----RHADLRGACSSNCLILGEIAARALDSAKTGLLWSLPTVLKPAHRPSYLDR 889 GP+ + + T +H+ +G + + V+F + +S A + +A+ GI RRY++ K NGV CYF+ DST + G + S + + +F + P + + +AR +L S+++ L ++ I + I +I +++ + +DG+G+IS DL P ++++G+ L + I S P +IQ R+ KGT L++ +L ++ R SM+K + +++ + SL+V+TT K T+LSR LV +L VP+ F+ L+ L+ + T A L+ + + + A+M+ G ++E +++ L L + L+ GR+ S Y++G DP G LK DEV V E G G VL+ R+P + + +A AL+ ++G +FF +G S ++ GD DGD YF+ + +++ +P V SKS + P F+ E + ++ +K S G A D + D +L A+ + L L +I ALD+AK G+ SLP LKP P Y++R Sbjct: 237 GPL-LEPTGTHLHKVLGDENVLTVKFADVQKNSSTYSNDRYSAYKRIAKNGIMVGLRRYQFFVFKDVGKAEKKKDFSTNGVKCYFIRTDSTAANDMGKAYIFSGKTINEARMHFMHVHTLPSLAKYMARFSLILSKTKKLEVDMTGITYQEIKEIHCHDQNNNVVLDKNKEPRMHSDGTGYISEDLARMCPVNIFKGKCL-SKKNIQESCGQDPPLLIQFRMFYDGNAVKGTFLLNKKLPDRTVQVRPSMIKV-SKDRALSNFSTFNSLEVVTTSNPPK-RTKLSRNLVALLSYGGVPNEFFLDLL---LNTMEETKTIFNNKRAALKAALNH--GDMDDQNAAQMILVGIPLDEPHLKDRLSILSNIEKNDLKAGRLPVTESYYLMGTVDPTGELKEDEVCVI--------------LESGQISGDVLVYRNPGVHFGDIHVLKATYVKALEEYVGNSKYAVFFPQKGPRSLGDEIAGGDFDGDMYFISRNPELLEQFKPSEPWVSLSPPSKSN-----------------------------------STRKPIDFSPEELEEELFDMFLKARFHSSNVIGMAADSWLTIMDRFLTLGDERAEEKAEMKRKMLSLIDIYYDALDAAKKGVKVSLPDALKPDIFPHYMER 829 The following BLAST results are available for this feature:
BLAST of NO16G00620 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO16G00620 ID=NO16G00620|Name=NO16G00620|organism=Nannochloropsis oceanica|type=gene|length=3699bpback to top protein sequence of NO16G00620.1 >NO16G00620.1-protein ID=NO16G00620.1-protein|Name=NO16G00620.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1199bpback to top Synonyms
Publications
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