NO16G00620, NO16G00620 (gene) Nannochloropsis oceanica

Overview
NameNO16G00620
Unique NameNO16G00620
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3699
Alignment locationchr16:218443..222141 +

Link to JBrowse

Properties
Property NameValue
DescriptionRNA-dependent RNA polymerase
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr16genomechr16:218443..222141 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003968RNA-directed 5'-3' RNA polymerase activity
Vocabulary: INTERPRO
TermDefinition
IPR007855RNA-dep_RNA_pol_euk-typ
Homology
BLAST of NO16G00620 vs. NCBI_GenBank
Match: EWM24076.1 (Rna-dependent RNA polymerase [Nannochloropsis gaditana])

HSP 1 Score: 268.9 bits (686), Expect = 7.800e-68
Identity = 181/464 (39.01%), Postives = 234/464 (50.43%), Query Frame = 0
Query:  725 MDGDTYFVCMHKDIVSFARPIH----VQKMERSKSRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSEMLTVVGPFHFNAESVGLQVDAAVMKRCLESCMAHGKAHDIVASASDWWLRHADLRGACSSNCLILGEIAARALDSAKTGLLWSLPTVLKPAHRPSYLDRSGWSSSSXXXXXXXXXYHRVLSYSEVDTLLGRIHARVAPLLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAFISPADTLRLDSDLRVEGSAAFLEQAQSWLKAYRQSYARRMGRXXXXXXXXXXXXXXXXXXXG--EYQALKSEVLAPFKQAFLATARASGGDK----MTSA--NKRGDEEEGIGAGGEERRPLQLLADNTLPTKAEATVTVGDKNNENSRVPXXXXXXXXXXXXXXXXGNINSRFDRRRLAVASAIYEVTYMSGSTLSFVWDTVMHELNHVKKTALARRE 1177
            MDGDTYFVCMH+ IV FA PI      +K     ++                              G+E+LT +GPF  + E+VG ++DA VM+RCLESC+A  KA  I+ASASDWW+RHAD+RGA S +C ILGEIA  A++SAKTG LWSLP VL+P H P YL+R     ++           R +S    D+ LGR+++RV PL                                     ++P D ++LD DLR+EGSAAF E AQSWLKAYRQS ARR  R                      +YQA K+++L PF Q  L    A+  DK     T A  ++RG            R+PLQ LA N              +++++S++                  N N   + RRLA+ASAIYEVTYM GS L+FVWD VM ELN +KK ALARR+
Sbjct:    1 MDGDTYFVCMHEKIVEFACPIEDNGAPEKDTNICTKERHGKSKSDNEIFLSNQPDIPASKTIPPCPGAELLTQIGPFRLDPETVGHKIDAKVMRRCLESCVAQAKASQILASASDWWIRHADIRGALSRDCRILGEIAVGAVNSAKTGELWSLPRVLRPQHYPPYLNRYSAVDATSP--------SRPIS---ADSFLGRVYSRVLPLFLETSRQKSASLRSDDVGNT-----------------VAPLDPIKLDVDLRIEGSAAFFELAQSWLKAYRQSLARRARRSSRSTWRHHEKEQQRSQCDHNCQYQASKADILFPF-QKLLGAVAAARADKTNLTFTHAVLDRRGQ--------ARARQPLQALAANV-------------RSDDSSKIASQVPAARSRNDSITDIQNENCTLETRRLAMASAIYEVTYMGGSILNFVWDLVMPELNQLKKDALARRK 414          
BLAST of NO16G00620 vs. NCBI_GenBank
Match: XP_023641477.1 (probable RNA-dependent RNA polymerase 5 isoform X2 [Capsella rubella])

HSP 1 Score: 149.4 bits (376), Expect = 6.900e-32
Identity = 159/656 (24.24%), Postives = 271/656 (41.31%), Query Frame = 0
Query:  275 GPMGMRGSSTFIHRAVGHDRFMRVQFGN---RRHWWSERGRHALQVLAQEGIHFACRRYKYINHK-----------SDRNGVCYFVAEDSTGK-EETGFRVMSAQCMIAGLGNFFNFPCVPRL---VARVALGFSRSQSLSLEPRQI--ELINDIFASEDSA-----------VMTDGSGFISPDLVSHLPPHLYQGRALPAAPLIGPSLAVPPFAVIQVRVICHMGGFKGTLLVHPRLQNKIQLRRSSMLKFPPPNLSVTPLTRRPSLDVLTTFRVLKAS-----TRLSRELVLILQALEVPDTVFIKLVEDELSLLRSACTDAEQAAALLRRSSSTLIRSSAEWQVAEMLKAGHGVNEAYIRKTLLGLRSRALVKLQQGRVFCPSSLYVVGQPDPLGVLKPDEVYVSHGLPTGYEGLPEGGTEDGVYEGKVLLARHPIYNPAHVQAFQAVKQPALQAFLGPRAGVLFFSVQGTPSPASRLSEGDMDGDTYFVCMHKDIVSFARPIH--VQKMERSKSRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSEMLTVVGPFHFNAESVGLQVDAAVMKRCLESCMAHGKAHDIVASASDWWL----RHADLRGACSSNCLILGEIAARALDSAKTGLLWSLPTVLKPAHRPSYLDR 889
            GP+ +  + T +H+ +G +  + V+F N       +        + +A+ GI    RRYK+   K           S +   CYF+  DST   +     + S + +     +F +   +P L   +AR +L  S+++ L ++   +  E+I DI   +              + +DG+G+IS DL    P ++Y+G+ L +  +       PP  +IQ R+  +    KGT L++ ++ ++    R SM+K  P +L        P++    T  V+  S     T+LSR LV +L    +PD  F+ ++ + L    S      + AAL   S   +   +A    A+M+ AG  ++E +++  L     R    L+ GR+    S Y++G  DP G LK DEV V                E G   G+VL+ R+P  +   +   +A    AL+ ++G     +FF  +G  S    ++ GD DGD YF+  + +++   +P    V     SKS                                    +  GP  F+ E +  ++    +K    +    G A D   +  D +L      AD +       L L +I   ALD+ K G    LP  L+P   P Y++R
Sbjct:  234 GPL-LESTGTHLHKVLGDENVLTVKFANVQKNSSTYCSDSYFTYKGIAKNGIMVGLRRYKFFVFKDGGKDDKNKDVSTKRAKCYFIRTDSTASIDMEKPYIFSGKSIHEARMHFMHVHTLPSLANYMARFSLILSKTKKLEVDLTGVNFEIIKDIPCHDQDGKDVLDKNKKPRIHSDGTGYISEDLAQMCPVNIYKGKCLRSDKIKEACGQEPPL-LIQFRMFYNGYAIKGTFLLNKKIPSRTVQVRPSMIKVLPDSL--------PNISTFNTLEVVNTSFPPKRTKLSRNLVALLSYGGIPDEFFLDILHNTLE--ESKAIFYNKRAALNALSYGEMDDQNA----AQMILAGIPLDEPHLKTCLSSFLKREKNDLKAGRLPVTESYYLMGTVDPTGELKEDEVCVI--------------LESGQISGEVLVYRNPGLHFGDIHVLKATYVKALEEYVGNSKFAVFFPQKGPRSLGDEIAGGDFDGDIYFISRNPELLEHFKPSEPWVSLTPPSKSN-----------------------------------SARGPCQFSPEELEEELFEMFLKAGFHASNVIGMAADSWLTIMDRFLILGDESADEKAEMKQKMLELIDIYYDALDAPKKGAKVYLPNELRPDIFPHYMER 824          
BLAST of NO16G00620 vs. NCBI_GenBank
Match: XP_006296906.1 (probable RNA-dependent RNA polymerase 5 isoform X1 [Capsella rubella] >EOA29804.1 hypothetical protein CARUB_v10012898mg [Capsella rubella])

HSP 1 Score: 149.1 bits (375), Expect = 9.000e-32
Identity = 157/656 (23.93%), Postives = 271/656 (41.31%), Query Frame = 0
Query:  275 GPMGMRGSSTFIHRAVGHDRFMRVQFGN---RRHWWSERGRHALQVLAQEGIHFACRRYKYINHK-----------SDRNGVCYFVAEDSTGK-EETGFRVMSAQCMIAGLGNFFNFPCVPRL---VARVALGFSRSQSLSLEPRQI--ELINDIFASEDSA-----------VMTDGSGFISPDLVSHLPPHLYQGRALPAAPLIGPSLAVPPFAVIQVRVICHMGGFKGTLLVHPRLQNKIQLRRSSMLKFPPPNLSVTPLTRRPSLDVLTTFRVLKAS-----TRLSRELVLILQALEVPDTVFIKLVEDELSLLRSACTDAEQAAALLRRSSSTLIRSSAEWQVAEMLKAGHGVNEAYIRKTLLGLRSRALVKLQQGRVFCPSSLYVVGQPDPLGVLKPDEVYVSHGLPTGYEGLPEGGTEDGVYEGKVLLARHPIYNPAHVQAFQAVKQPALQAFLGPRAGVLFFSVQGTPSPASRLSEGDMDGDTYFVCMHKDIVSFARPIH--VQKMERSKSRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSEMLTVVGPFHFNAESVGLQVDAAVMKRCLESCMAHGKAHDIVASASDWWL----RHADLRGACSSNCLILGEIAARALDSAKTGLLWSLPTVLKPAHRPSYLDR 889
            GP+ +  + T +H+ +G +  + V+F N       +        + +A+ GI    RRYK+   K           S +   CYF+  DST   +     + S + +     +F +   +P L   +AR +L  S+++ L ++   +  E+I DI   +              + +DG+G+IS DL    P ++Y+G+ L +  +       PP  +IQ R+  +    KGT L++ ++ ++    R SM+K  P +L        P++    T  V+  S     T+LSR LV +L    +PD  F+ ++ + L    S      + AAL   +++       +   A+M+ AG  ++E +++  L     R    L+ GR+    S Y++G  DP G LK DEV V                E G   G+VL+ R+P  +   +   +A    AL+ ++G     +FF  +G  S    ++ GD DGD YF+  + +++   +P    V     SKS                                    +  GP  F+ E +  ++    +K    +    G A D   +  D +L      AD +       L L +I   ALD+ K G    LP  L+P   P Y++R
Sbjct:  233 GPL-LESTGTHLHKVLGDENVLTVKFANVQKNSSTYCSDSYFTYKGIAKNGIMVGLRRYKFFVFKDGGKDDKNKDVSTKRAKCYFIRTDSTASIDMEKPYIFSGKSIHEARMHFMHVHTLPSLANYMARFSLILSKTKKLEVDLTGVNFEIIKDIPCHDQDGKDVLDKNKKPRIHSDGTGYISEDLAQMCPVNIYKGKCLRSDKIKEACGQEPPL-LIQFRMFYNGYAIKGTFLLNKKIPSRTVQVRPSMIKVLPDSL--------PNISTFNTLEVVNTSFPPKRTKLSRNLVALLSYGGIPDEFFLDILHNTLE--ESKAIFYNKRAAL---NAALSYGEMDDQNAAQMILAGIPLDEPHLKTCLSSFLKREKNDLKAGRLPVTESYYLMGTVDPTGELKEDEVCVI--------------LESGQISGEVLVYRNPGLHFGDIHVLKATYVKALEEYVGNSKFAVFFPQKGPRSLGDEIAGGDFDGDIYFISRNPELLEHFKPSEPWVSLTPPSKSN-----------------------------------SARGPCQFSPEELEEELFEMFLKAGFHASNVIGMAADSWLTIMDRFLILGDESADEKAEMKQKMLELIDIYYDALDAPKKGAKVYLPNELRPDIFPHYMER 824          
BLAST of NO16G00620 vs. NCBI_GenBank
Match: XP_023641478.1 (probable RNA-dependent RNA polymerase 5 isoform X3 [Capsella rubella])

HSP 1 Score: 149.1 bits (375), Expect = 9.000e-32
Identity = 157/656 (23.93%), Postives = 271/656 (41.31%), Query Frame = 0
Query:  275 GPMGMRGSSTFIHRAVGHDRFMRVQFGN---RRHWWSERGRHALQVLAQEGIHFACRRYKYINHK-----------SDRNGVCYFVAEDSTGK-EETGFRVMSAQCMIAGLGNFFNFPCVPRL---VARVALGFSRSQSLSLEPRQI--ELINDIFASEDSA-----------VMTDGSGFISPDLVSHLPPHLYQGRALPAAPLIGPSLAVPPFAVIQVRVICHMGGFKGTLLVHPRLQNKIQLRRSSMLKFPPPNLSVTPLTRRPSLDVLTTFRVLKAS-----TRLSRELVLILQALEVPDTVFIKLVEDELSLLRSACTDAEQAAALLRRSSSTLIRSSAEWQVAEMLKAGHGVNEAYIRKTLLGLRSRALVKLQQGRVFCPSSLYVVGQPDPLGVLKPDEVYVSHGLPTGYEGLPEGGTEDGVYEGKVLLARHPIYNPAHVQAFQAVKQPALQAFLGPRAGVLFFSVQGTPSPASRLSEGDMDGDTYFVCMHKDIVSFARPIH--VQKMERSKSRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSEMLTVVGPFHFNAESVGLQVDAAVMKRCLESCMAHGKAHDIVASASDWWL----RHADLRGACSSNCLILGEIAARALDSAKTGLLWSLPTVLKPAHRPSYLDR 889
            GP+ +  + T +H+ +G +  + V+F N       +        + +A+ GI    RRYK+   K           S +   CYF+  DST   +     + S + +     +F +   +P L   +AR +L  S+++ L ++   +  E+I DI   +              + +DG+G+IS DL    P ++Y+G+ L +  +       PP  +IQ R+  +    KGT L++ ++ ++    R SM+K  P +L        P++    T  V+  S     T+LSR LV +L    +PD  F+ ++ + L    S      + AAL   +++       +   A+M+ AG  ++E +++  L     R    L+ GR+    S Y++G  DP G LK DEV V                E G   G+VL+ R+P  +   +   +A    AL+ ++G     +FF  +G  S    ++ GD DGD YF+  + +++   +P    V     SKS                                    +  GP  F+ E +  ++    +K    +    G A D   +  D +L      AD +       L L +I   ALD+ K G    LP  L+P   P Y++R
Sbjct:  209 GPL-LESTGTHLHKVLGDENVLTVKFANVQKNSSTYCSDSYFTYKGIAKNGIMVGLRRYKFFVFKDGGKDDKNKDVSTKRAKCYFIRTDSTASIDMEKPYIFSGKSIHEARMHFMHVHTLPSLANYMARFSLILSKTKKLEVDLTGVNFEIIKDIPCHDQDGKDVLDKNKKPRIHSDGTGYISEDLAQMCPVNIYKGKCLRSDKIKEACGQEPPL-LIQFRMFYNGYAIKGTFLLNKKIPSRTVQVRPSMIKVLPDSL--------PNISTFNTLEVVNTSFPPKRTKLSRNLVALLSYGGIPDEFFLDILHNTLE--ESKAIFYNKRAAL---NAALSYGEMDDQNAAQMILAGIPLDEPHLKTCLSSFLKREKNDLKAGRLPVTESYYLMGTVDPTGELKEDEVCVI--------------LESGQISGEVLVYRNPGLHFGDIHVLKATYVKALEEYVGNSKFAVFFPQKGPRSLGDEIAGGDFDGDIYFISRNPELLEHFKPSEPWVSLTPPSKSN-----------------------------------SARGPCQFSPEELEEELFEMFLKAGFHASNVIGMAADSWLTIMDRFLILGDESADEKAEMKQKMLELIDIYYDALDAPKKGAKVYLPNELRPDIFPHYMER 800          
BLAST of NO16G00620 vs. NCBI_GenBank
Match: PTQ38911.1 (hypothetical protein MARPO_0048s0033 [Marchantia polymorpha])

HSP 1 Score: 147.5 bits (371), Expect = 2.600e-31
Identity = 136/490 (27.76%), Postives = 225/490 (45.92%), Query Frame = 0
Query:  282 SSTFIHRAVGHDRFMRVQF-----GNRRHWWSERGRHALQVLAQEGIHFACRRYKYINHKS--------DRNGVCYFVAEDSTGKEETGFRVMSAQCMIAGLGNFF----NFPCVPRLVARVALGFSRSQSLSLEPRQIELINDIFASEDSAVMTDGSGFISPDLVSHLPPHLYQGR--ALPAAPLIGPSLAVPPFAVIQVRVICHMGGFKGTLLVHPRL-QNKIQLRRSSMLKFPPPNLSVTPLTRRPSLDVLTTF---RVLKA--STRLSRELVLILQALEVPDTVFIKLVEDELSLLRSACTDAEQAAALLRRSSSTLIRSSAEWQVAE------MLKAGHGVNEAYIRKTLLGLRSRALVKLQQGRVFCPSSLYVVGQPDPLGVLKPDEVYVSHGLPTGYEGLPEGGTEDGVYEGKVLLARHPIYNPAHVQAFQAVKQPALQAFLGPRAGVLFFSVQGTPSPASRLSEGDMDGDTYFVCMHKDIVS 741
            + + +HR +G D+ ++V F       +R   S+        LA+ GI   CRRY+Y  HK+        + N  C+FV  DS G+ +           IA     F        + + +AR+ L  S++ ++ L+  ++ +   +       + TDG+GFIS +L   +P  +  GR    P      PSL+       QVRV+     +KGTLL    L  N I+L + SM K    +  + P  +  SL++++T    R L+   + +LSR+L+++L    VP + FI LV       ++A  D      L+    +  +    EW+  +      M+ A   + E ++ ++LL +  R L     G+V  P S Y++G  DP G LK ++V +          L +G     VY  K+L+ R P  +P  +  F+A     LQ  +G    V++FS QG    A  + +GD+DGD Y+VC +  +VS
Sbjct:  607 AKSLVHRTLGFDKVLKVAFEAEVEDGKRVPLSQDQYSMYCRLAKNGIFVGCRRYQYFAHKASDKFEKKMEGNVKCFFVCTDSRGEVDLRNPYFRRFNSIAEARTLFMHIHQTESIAKFIARMQLILSKTMTIDLDWTKVVVREKMDLQCQDGISTDGTGFISTNLARIIPTSILNGRQKTEPDRNEDYPSLS-------QVRVLYEGAAYKGTLLASEALPPNTIKLYK-SMKKVGRDDEVLLPSVK--SLEIVSTSQKPRKLQGVYTAKLSRDLIILLTTCGVPGSFFIDLV-------KAAIEDNH----LIFSDYNVAMNEVLEWETEKTEILLMMINARIPLTEPFLHRSLLDIVKRKLEDFTTGKVNLPESFYLMGTADPTGTLKRNQVAIV---------LSDG----PVYCPKLLVYRAPGKHPGDIHVFEATCNSVLQKVIGSGKYVIYFSTQGPRPIAEEIGKGDLDGDRYWVCKNTQLVS 1062          
BLAST of NO16G00620 vs. NCBI_GenBank
Match: PTQ38912.1 (hypothetical protein MARPO_0048s0033 [Marchantia polymorpha])

HSP 1 Score: 147.5 bits (371), Expect = 2.600e-31
Identity = 136/490 (27.76%), Postives = 225/490 (45.92%), Query Frame = 0
Query:  282 SSTFIHRAVGHDRFMRVQF-----GNRRHWWSERGRHALQVLAQEGIHFACRRYKYINHKS--------DRNGVCYFVAEDSTGKEETGFRVMSAQCMIAGLGNFF----NFPCVPRLVARVALGFSRSQSLSLEPRQIELINDIFASEDSAVMTDGSGFISPDLVSHLPPHLYQGR--ALPAAPLIGPSLAVPPFAVIQVRVICHMGGFKGTLLVHPRL-QNKIQLRRSSMLKFPPPNLSVTPLTRRPSLDVLTTF---RVLKA--STRLSRELVLILQALEVPDTVFIKLVEDELSLLRSACTDAEQAAALLRRSSSTLIRSSAEWQVAE------MLKAGHGVNEAYIRKTLLGLRSRALVKLQQGRVFCPSSLYVVGQPDPLGVLKPDEVYVSHGLPTGYEGLPEGGTEDGVYEGKVLLARHPIYNPAHVQAFQAVKQPALQAFLGPRAGVLFFSVQGTPSPASRLSEGDMDGDTYFVCMHKDIVS 741
            + + +HR +G D+ ++V F       +R   S+        LA+ GI   CRRY+Y  HK+        + N  C+FV  DS G+ +           IA     F        + + +AR+ L  S++ ++ L+  ++ +   +       + TDG+GFIS +L   +P  +  GR    P      PSL+       QVRV+     +KGTLL    L  N I+L + SM K    +  + P  +  SL++++T    R L+   + +LSR+L+++L    VP + FI LV       ++A  D      L+    +  +    EW+  +      M+ A   + E ++ ++LL +  R L     G+V  P S Y++G  DP G LK ++V +          L +G     VY  K+L+ R P  +P  +  F+A     LQ  +G    V++FS QG    A  + +GD+DGD Y+VC +  +VS
Sbjct:  607 AKSLVHRTLGFDKVLKVAFEAEVEDGKRVPLSQDQYSMYCRLAKNGIFVGCRRYQYFAHKASDKFEKKMEGNVKCFFVCTDSRGEVDLRNPYFRRFNSIAEARTLFMHIHQTESIAKFIARMQLILSKTMTIDLDWTKVVVREKMDLQCQDGISTDGTGFISTNLARIIPTSILNGRQKTEPDRNEDYPSLS-------QVRVLYEGAAYKGTLLASEALPPNTIKLYK-SMKKVGRDDEVLLPSVK--SLEIVSTSQKPRKLQGVYTAKLSRDLIILLTTCGVPGSFFIDLV-------KAAIEDNH----LIFSDYNVAMNEVLEWETEKTEILLMMINARIPLTEPFLHRSLLDIVKRKLEDFTTGKVNLPESFYLMGTADPTGTLKRNQVAIV---------LSDG----PVYCPKLLVYRAPGKHPGDIHVFEATCNSVLQKVIGSGKYVIYFSTQGPRPIAEEIGKGDLDGDRYWVCKNTQLVS 1062          
BLAST of NO16G00620 vs. NCBI_GenBank
Match: PTQ38913.1 (hypothetical protein MARPO_0048s0033 [Marchantia polymorpha])

HSP 1 Score: 147.5 bits (371), Expect = 2.600e-31
Identity = 136/490 (27.76%), Postives = 225/490 (45.92%), Query Frame = 0
Query:  282 SSTFIHRAVGHDRFMRVQF-----GNRRHWWSERGRHALQVLAQEGIHFACRRYKYINHKS--------DRNGVCYFVAEDSTGKEETGFRVMSAQCMIAGLGNFF----NFPCVPRLVARVALGFSRSQSLSLEPRQIELINDIFASEDSAVMTDGSGFISPDLVSHLPPHLYQGR--ALPAAPLIGPSLAVPPFAVIQVRVICHMGGFKGTLLVHPRL-QNKIQLRRSSMLKFPPPNLSVTPLTRRPSLDVLTTF---RVLKA--STRLSRELVLILQALEVPDTVFIKLVEDELSLLRSACTDAEQAAALLRRSSSTLIRSSAEWQVAE------MLKAGHGVNEAYIRKTLLGLRSRALVKLQQGRVFCPSSLYVVGQPDPLGVLKPDEVYVSHGLPTGYEGLPEGGTEDGVYEGKVLLARHPIYNPAHVQAFQAVKQPALQAFLGPRAGVLFFSVQGTPSPASRLSEGDMDGDTYFVCMHKDIVS 741
            + + +HR +G D+ ++V F       +R   S+        LA+ GI   CRRY+Y  HK+        + N  C+FV  DS G+ +           IA     F        + + +AR+ L  S++ ++ L+  ++ +   +       + TDG+GFIS +L   +P  +  GR    P      PSL+       QVRV+     +KGTLL    L  N I+L + SM K    +  + P  +  SL++++T    R L+   + +LSR+L+++L    VP + FI LV       ++A  D      L+    +  +    EW+  +      M+ A   + E ++ ++LL +  R L     G+V  P S Y++G  DP G LK ++V +          L +G     VY  K+L+ R P  +P  +  F+A     LQ  +G    V++FS QG    A  + +GD+DGD Y+VC +  +VS
Sbjct:  121 AKSLVHRTLGFDKVLKVAFEAEVEDGKRVPLSQDQYSMYCRLAKNGIFVGCRRYQYFAHKASDKFEKKMEGNVKCFFVCTDSRGEVDLRNPYFRRFNSIAEARTLFMHIHQTESIAKFIARMQLILSKTMTIDLDWTKVVVREKMDLQCQDGISTDGTGFISTNLARIIPTSILNGRQKTEPDRNEDYPSLS-------QVRVLYEGAAYKGTLLASEALPPNTIKLYK-SMKKVGRDDEVLLPSVK--SLEIVSTSQKPRKLQGVYTAKLSRDLIILLTTCGVPGSFFIDLV-------KAAIEDNH----LIFSDYNVAMNEVLEWETEKTEILLMMINARIPLTEPFLHRSLLDIVKRKLEDFTTGKVNLPESFYLMGTADPTGTLKRNQVAIV---------LSDG----PVYCPKLLVYRAPGKHPGDIHVFEATCNSVLQKVIGSGKYVIYFSTQGPRPIAEEIGKGDLDGDRYWVCKNTQLVS 576          
BLAST of NO16G00620 vs. NCBI_GenBank
Match: PTQ38910.1 (hypothetical protein MARPO_0048s0033 [Marchantia polymorpha])

HSP 1 Score: 147.5 bits (371), Expect = 2.600e-31
Identity = 136/490 (27.76%), Postives = 225/490 (45.92%), Query Frame = 0
Query:  282 SSTFIHRAVGHDRFMRVQF-----GNRRHWWSERGRHALQVLAQEGIHFACRRYKYINHKS--------DRNGVCYFVAEDSTGKEETGFRVMSAQCMIAGLGNFF----NFPCVPRLVARVALGFSRSQSLSLEPRQIELINDIFASEDSAVMTDGSGFISPDLVSHLPPHLYQGR--ALPAAPLIGPSLAVPPFAVIQVRVICHMGGFKGTLLVHPRL-QNKIQLRRSSMLKFPPPNLSVTPLTRRPSLDVLTTF---RVLKA--STRLSRELVLILQALEVPDTVFIKLVEDELSLLRSACTDAEQAAALLRRSSSTLIRSSAEWQVAE------MLKAGHGVNEAYIRKTLLGLRSRALVKLQQGRVFCPSSLYVVGQPDPLGVLKPDEVYVSHGLPTGYEGLPEGGTEDGVYEGKVLLARHPIYNPAHVQAFQAVKQPALQAFLGPRAGVLFFSVQGTPSPASRLSEGDMDGDTYFVCMHKDIVS 741
            + + +HR +G D+ ++V F       +R   S+        LA+ GI   CRRY+Y  HK+        + N  C+FV  DS G+ +           IA     F        + + +AR+ L  S++ ++ L+  ++ +   +       + TDG+GFIS +L   +P  +  GR    P      PSL+       QVRV+     +KGTLL    L  N I+L + SM K    +  + P  +  SL++++T    R L+   + +LSR+L+++L    VP + FI LV       ++A  D      L+    +  +    EW+  +      M+ A   + E ++ ++LL +  R L     G+V  P S Y++G  DP G LK ++V +          L +G     VY  K+L+ R P  +P  +  F+A     LQ  +G    V++FS QG    A  + +GD+DGD Y+VC +  +VS
Sbjct:  157 AKSLVHRTLGFDKVLKVAFEAEVEDGKRVPLSQDQYSMYCRLAKNGIFVGCRRYQYFAHKASDKFEKKMEGNVKCFFVCTDSRGEVDLRNPYFRRFNSIAEARTLFMHIHQTESIAKFIARMQLILSKTMTIDLDWTKVVVREKMDLQCQDGISTDGTGFISTNLARIIPTSILNGRQKTEPDRNEDYPSLS-------QVRVLYEGAAYKGTLLASEALPPNTIKLYK-SMKKVGRDDEVLLPSVK--SLEIVSTSQKPRKLQGVYTAKLSRDLIILLTTCGVPGSFFIDLV-------KAAIEDNH----LIFSDYNVAMNEVLEWETEKTEILLMMINARIPLTEPFLHRSLLDIVKRKLEDFTTGKVNLPESFYLMGTADPTGTLKRNQVAIV---------LSDG----PVYCPKLLVYRAPGKHPGDIHVFEATCNSVLQKVIGSGKYVIYFSTQGPRPIAEEIGKGDLDGDRYWVCKNTQLVS 612          
BLAST of NO16G00620 vs. NCBI_GenBank
Match: OAE30264.1 (hypothetical protein AXG93_2956s1150 [Marchantia polymorpha subsp. ruderalis])

HSP 1 Score: 141.7 bits (356), Expect = 1.400e-29
Identity = 136/504 (26.98%), Postives = 225/504 (44.64%), Query Frame = 0
Query:  282 SSTFIHRAVGHDRFMRVQF-----GNRRHWWSERGRHALQVLAQEGIHFACRRYKYINHKS--------DRNGVCYFVAEDSTGKEETGFRVMSAQCMIAGLGNFF----NFPCVPRLVARVALGFSRSQSLSLEPRQIELINDIFASEDSAVMTDGSGFISPDLVSHLPPHLYQGR--ALPAAPLIGPSLAVPPFAVIQVRVICHMGGFKGTLLVHPRL-QNKIQLRRSSMLKFPPPNLSVTPLTRRPSLDVLTTF-----------------RVLKA--STRLSRELVLILQALEVPDTVFIKLVEDELSLLRSACTDAEQAAALLRRSSSTLIRSSAEWQVAE------MLKAGHGVNEAYIRKTLLGLRSRALVKLQQGRVFCPSSLYVVGQPDPLGVLKPDEVYVSHGLPTGYEGLPEGGTEDGVYEGKVLLARHPIYNPAHVQAFQAVKQPALQAFLGPRAGVLFFSVQGTPSPASRLSEGDMDGDTYFVCMHKDIVS 741
            + + +HR +G D+ ++V F       +R   S+        LA+ GI   CRRY+Y  HK+        + N  C+FV  DS G+ +           IA     F        + + +AR+ L  S++ ++ L+  ++ +   +       + TDG+GFIS +L   +P  +  GR    P      PSL+       QVRV+     +KGTLL    L  N I+L + SM K    +  + P  +  SL++++T                  R L+   + +LSR+L+++L    VP + FI LV       ++A  D      L+    +  +    EW+  +      M+ A   + E ++ ++LL +  R L     G+V  P S Y++G  DP G LK ++V +          L +G     VY  K+L+ R P  +P  +  F+A     LQ  +G    V++FS QG    A  + +GD+DGD Y+VC +  +VS
Sbjct:  565 AKSLVHRTLGFDKVLKVAFEAEVEDGKRVPLSQDQYSMYCRLAKNGIFVGCRRYQYFAHKASDKFEKKMEGNVKCFFVCTDSRGEVDLRNPYFRRFNSIAEARTLFMHIHQTESIAKFIARMQLILSKTMTIDLDWTKVVVREKMDLQCQDGISTDGTGFISTNLARIIPTSILNGRQKTEPDRNEDYPSLS-------QVRVLYEGAAYKGTLLASEALPPNTIKLYK-SMKKVGRDDEVLLPSVK--SLEIVSTRFYTALNIMICSWNSQKPRKLQGVYTAKLSRDLIILLTTCGVPGSFFIDLV-------KAAIEDNH----LIFSDYNVAMNEVLEWETEKTEILLMMINARIPLTEPFLHRSLLDIVKRKLEDFTTGKVNLPESFYLMGTADPTGTLKRNQVAIV---------LSDG----PVYCPKLLVYRAPGKHPGDIHVFEATCNSVLQKVIGSGKYVIYFSTQGPRPIAEEIGKGDLDGDRYWVCKNTQLVS 1034          
BLAST of NO16G00620 vs. NCBI_GenBank
Match: XP_006408908.1 (probable RNA-dependent RNA polymerase 5 isoform X1 [Eutrema salsugineum] >ESQ50361.1 hypothetical protein EUTSA_v10001897mg [Eutrema salsugineum])

HSP 1 Score: 139.8 bits (351), Expect = 5.500e-29
Identity = 160/651 (24.58%), Postives = 278/651 (42.70%), Query Frame = 0
Query:  275 GPMGMRGSSTFIHRAVGHDRFMRVQFGN---RRHWWSERGRHALQVLAQEGIHFACRRYKYINHKS----------DRNGV-CYFVAEDSTGKEETG-FRVMSAQCMIAGLGNFFN---FPCVPRLVARVALGFSRSQSLSLEPRQI--ELINDIFA-----------SEDSAVMTDGSGFISPDLVSHLPPHLYQGRALPAAPLIGPSLAVPPFAVIQVRVICHMGGFKGTLLVHPRLQNKIQLRRSSMLKFPPPNLSVTPLTRRPSLDVLTTFRVLKASTRLSRELVLILQALEVPDTVFIKLVEDELSLLRSACTDAEQAAALLRRSSSTLIRSSAEWQVAEMLKAGHGVNEAYIRKTLLGLRSRALVKLQQGRVFCPSSLYVVGQPDPLGVLKPDEVYVSHGLPTGYEGLPEGGTEDGVYEGKVLLARHPIYNPAHVQAFQAVKQPALQAFLGPRAGVLFFSVQGTPSPASRLSEGDMDGDTYFVCMHKDIVSFARPIH--VQKMERSKSRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSEMLTVVGPFHFNAESVGLQVDAAVMKRCLESCMAHGKAHDIVASASDWWL----RHADLRGACSSNCLILGEIAARALDSAKTGLLWSLPTVLKPAHRPSYLDR 889
            GP+ +  + T +H+ +G +  + V+F +       +S     A + +A+ GI    RRY++   K             NGV CYF+  DST   + G   + S + +     +F +    P + + +AR +L  S+++ L ++   I  + I +I             +++  + +DG+G+IS DL    P ++++G+ L +   I  S    P  +IQ R+       KGT L++ +L ++    R SM+K    + +++  +   SL+V+TT    K  T+LSR LV +L    VP+  F+ L+   L+ +    T      A L+ + +       +   A+M+  G  ++E +++  L  L +     L+ GR+    S Y++G  DP G LK DEV V                E G   G VL+ R+P  +   +   +A    AL+ ++G     +FF  +G  S    ++ GD DGD YF+  + +++   +P    V     SKS                                    +   P  F+ E +  ++    +K    S    G A D   +  D +L      A+ +       L L +I   ALD+AK G+  SLP  LKP   P Y++R
Sbjct:  237 GPL-LEPTGTHLHKVLGDENVLTVKFADVQKNSSTYSNDRYSAYKRIAKNGIMVGLRRYQFFVFKDVGKAEKKKDFSTNGVKCYFIRTDSTAANDMGKAYIFSGKTINEARMHFMHVHTLPSLAKYMARFSLILSKTKKLEVDMTGITYQEIKEIHCHDQNNNVVLDKNKEPRMHSDGTGYISEDLARMCPVNIFKGKCL-SKKNIQESCGQDPPLLIQFRMFYDGNAVKGTFLLNKKLPDRTVQVRPSMIKV-SKDRALSNFSTFNSLEVVTTSNPPK-RTKLSRNLVALLSYGGVPNEFFLDLL---LNTMEETKTIFNNKRAALKAALNH--GDMDDQNAAQMILVGIPLDEPHLKDRLSILSNIEKNDLKAGRLPVTESYYLMGTVDPTGELKEDEVCVI--------------LESGQISGDVLVYRNPGVHFGDIHVLKATYVKALEEYVGNSKYAVFFPQKGPRSLGDEIAGGDFDGDMYFISRNPELLEQFKPSEPWVSLSPPSKSN-----------------------------------STRKPIDFSPEELEEELFDMFLKARFHSSNVIGMAADSWLTIMDRFLTLGDERAEEKAEMKRKMLSLIDIYYDALDAAKKGVKVSLPDALKPDIFPHYMER 829          
The following BLAST results are available for this feature:
BLAST of NO16G00620 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM24076.17.800e-6839.01Rna-dependent RNA polymerase [Nannochloropsis gadi... [more]
XP_023641477.16.900e-3224.24probable RNA-dependent RNA polymerase 5 isoform X2... [more]
XP_006296906.19.000e-3223.93probable RNA-dependent RNA polymerase 5 isoform X1... [more]
XP_023641478.19.000e-3223.93probable RNA-dependent RNA polymerase 5 isoform X3... [more]
PTQ38911.12.600e-3127.76hypothetical protein MARPO_0048s0033 [Marchantia p... [more]
PTQ38912.12.600e-3127.76hypothetical protein MARPO_0048s0033 [Marchantia p... [more]
PTQ38913.12.600e-3127.76hypothetical protein MARPO_0048s0033 [Marchantia p... [more]
PTQ38910.12.600e-3127.76hypothetical protein MARPO_0048s0033 [Marchantia p... [more]
OAE30264.11.400e-2926.98hypothetical protein AXG93_2956s1150 [Marchantia p... [more]
XP_006408908.15.500e-2924.58probable RNA-dependent RNA polymerase 5 isoform X1... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL150nonsL150Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR018ncniR018Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR031ngnoR031Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK003051NSK003051Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO16G00620.1NO16G00620.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|593202gene_5940Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100063g28gene6407Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO16G00620.1NO16G00620.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO16G00620 ID=NO16G00620|Name=NO16G00620|organism=Nannochloropsis oceanica|type=gene|length=3699bp
AAATTACAGGCCGTAAACAAGCGCGTCTCCGGCAAATTGTCTTGCTCCTG
CTGCTTCAATTTGTTCCGTGGGACCGCAATATACACACGGACACACGCAA
TCATGATAGAAAACCCGGGCGGAAAAATCAGCAGCAATAGCTATAGTAGT
AGCTACAGCAATTCGAGCATGACTTCCAACCTCACAATCGCCGCCGATGC
TAGAGACGACACACAACCAAACCCTCGTCCACCATTGACACAAGAAGTGC
CCACCATTCAAATGGCGCGATTAGCATTGCAGACTCAGCTTACGCAGCAG
AAACAAGGTCAACAGCAGCACCAAGAATTCATGCTCAATCAACCTCAACC
CACACCGTCAGTCGTTTTCGTTCAAAAGCCCGCTCACCACGAGCAGCCCT
TCTACGTCCTGGTAGGGAGCCACAAACTCGGCTTCGCCTGCGGCCCCTAC
CTTATCAGTGCCTTATCTCAGCTTCCAATGGAACATAGGATAGAAGTCCT
ATCGTCGATGCAGGCGTGGGCGCAGCATTCCTCAGATGCCAAGGATGCGG
CCCACGTGAAGGCCCGGTTGACGCACACCCTTCAAAATCTAGTGGGGGCC
AGCAGCCTCTCGCCCACTTATGCACCCTTCCCTGAACATGACCCAGCGTG
GCCACTATTTCGCACCTTGCCCTTCCCTATGCGGGCGTTGGTTGAATATA
GCTTGACTCCTGAAATGTTGGTATCCCGCAAAGCTGCTCCTATCCTACGG
GACGTGCATCGTTCAGGCGGGCTACCACAGGCAGAGGCCGTGCTGACTCG
TTTTGTGGGCAAAGAAATGATGGAAGGAGTAGCAGAGGCATTTATAGGGG
GAGGAGTGGTGGATTGGGGGGTGCGGTTGACATTAGACAAGGAGGCGGGG
ACGGGGTTTGTGATAAAGCACATGGGCCCCATGGGGATGCGGGGTAGCTC
TACTTTTATACATCGTGCCGTGGGACATGATCGATTTATGCGCGTACAAT
TTGGTAACCGCCGACATTGGTGGAGTGAGCGGGGGAGACATGCCTTGCAA
GTGCTTGCACAGGAGGGGATTCATTTTGCTTGTCGACGCTATAAATACAT
CAACCACAAATCGGATAGGAATGGGGTGTGTTATTTTGTGGCAGAAGACT
CTACGGGTAAGGAAGAAACAGGATTTCGGGTCATGTCTGCCCAGTGCATG
ATTGCGGGACTGGGAAATTTCTTCAATTTTCCCTGTGTCCCGCGGCTGGT
GGCGCGGGTGGCGTTGGGGTTTAGTCGATCACAATCCTTGAGCTTGGAAC
CGAGGCAAATCGAGTTGATTAACGACATATTTGCAAGCGAGGATAGTGCT
GTCATGACAGACGGCTCGGGATTTATATCGCCCGATCTTGTCTCACACTT
GCCCCCGCATTTATACCAGGGGCGAGCCCTGCCTGCTGCCCCGCTCATCG
GGCCTTCCCTTGCTGTGCCTCCGTTTGCTGTTATCCAAGTGCGGGTCATA
TGCCACATGGGTGGGTTTAAAGGCACCCTCCTTGTTCACCCACGCCTTCA
AAACAAGATCCAGCTCCGACGTTCTTCCATGCTGAAATTTCCTCCTCCCA
ATCTGTCGGTTACTCCTTTGACTCGTCGGCCTAGCCTGGACGTGCTGACA
ACCTTTCGTGTATTGAAAGCAAGCACCCGTCTCTCCCGCGAATTGGTGCT
GATCCTGCAGGCGCTGGAAGTACCTGACACCGTATTTATCAAACTGGTGG
AGGACGAACTCAGCTTGCTGCGTTCTGCGTGCACTGATGCAGAGCAGGCC
GCGGCTCTGCTGCGGCGATCAAGTTCAACGCTTATCCGCTCGTCGGCGGA
GTGGCAGGTAGCAGAAATGTTGAAAGCAGGACATGGGGTAAACGAAGCAT
ACATCCGAAAAACCCTCTTAGGCCTTCGCAGTCGTGCACTGGTCAAGTTA
CAGCAGGGACGGGTCTTTTGTCCTTCTTCTCTTTATGTGGTGGGGCAGCC
GGACCCACTGGGTGTTCTCAAGCCTGACGAGGTATACGTAAGTCATGGGC
TACCGACAGGATATGAGGGCCTACCGGAAGGAGGGACGGAGGATGGGGTC
TACGAGGGGAAGGTGCTATTGGCAAGGCACCCCATTTATAATCCTGCACA
TGTACAAGCATTTCAGGCAGTGAAACAACCCGCGCTTCAAGCTTTCCTAG
GGCCACGGGCAGGAGTATTATTTTTCAGTGTTCAAGGCACACCAAGCCCG
GCCTCTCGATTATCGGAAGGGGATATGGACGGGGACACTTATTTTGTGTG
TATGCATAAGGATATTGTGTCATTTGCGCGTCCGATTCATGTACAGAAGA
TGGAGAGGAGCAAGAGCCGTGGTAGCAGTAGTAGCAGCATCAGTGGTGGC
TCCAGCGCTATCCCAGCAGCACCGTCAGCAGCACCATCATCACCACAACC
ACCGTGTCCAGGCTCCGAGATGCTGACGGTCGTTGGGCCTTTCCATTTCA
ATGCCGAGTCGGTCGGCCTCCAGGTGGATGCTGCGGTCATGAAACGGTGC
TTGGAGAGCTGCATGGCGCACGGTAAGGCCCACGATATCGTCGCCAGTGC
CAGTGATTGGTGGTTGAGGCATGCAGATCTCCGTGGGGCCTGCTCGTCGA
ATTGCTTGATTCTGGGAGAAATTGCGGCGAGGGCGCTTGATAGCGCCAAG
ACGGGGCTGCTGTGGTCCTTGCCTACCGTACTCAAGCCTGCTCATCGCCC
AAGTTATCTGGACCGAAGTGGATGGAGCTCATCCTCAGCCTTCTCCTCCT
CCTCATTATCCTCCTATCATCGCGTCTTGAGCTACTCCGAAGTCGACACG
CTGCTTGGCCGCATCCATGCCCGTGTTGCGCCCCTTTTGGCGGACGACAA
GAGCAGTAGCAGCAGCAGCACCACCACCAGCAGCAGTAGTAGTATGAGAG
GTGGCAAAAAGAATGTTACATACTCCAGCGGTGGTGGCAACGCCTTCATT
TCTCCAGCAGATACTCTTCGTTTGGACAGTGACTTGAGGGTAGAGGGCTC
GGCGGCCTTTCTCGAGCAAGCACAGTCATGGCTCAAGGCTTACCGACAGT
CGTATGCCCGAAGGATGGGACGGCGGTACCATGCGCAGCAGCAGCAGCGG
CAGCAGCAGCAGCAGCAAAATGATGACCCCGGAGAGTATCAGGCTCTCAA
GTCGGAGGTGCTGGCGCCTTTTAAGCAGGCCTTCCTTGCCACAGCTAGAG
CAAGTGGAGGGGACAAGATGACATCAGCGAACAAGAGAGGAGATGAAGAA
GAAGGAATTGGGGCAGGAGGAGAAGAGCGACGGCCCTTGCAGCTTCTGGC
GGACAATACACTTCCCACCAAGGCGGAAGCCACAGTGACAGTAGGTGATA
AAAATAACGAAAATAGCAGAGTACCAGCCACGACCGTGAAGACAACGACG
ACGACGACAACGAGCGGCGAAAGTGGAAACATCAACAGCAGATTTGACAG
GCGGCGCTTGGCTGTGGCCTCGGCGATCTACGAAGTGACATACATGAGTG
GAAGTACCTTGAGCTTCGTATGGGATACGGTCATGCACGAATTGAATCAC
GTCAAAAAGACGGCATTGGCAAGGAGGGAGGTGGCGGAAAAGGAGATTGG
AGAAGCGATCGTTGCGGTGAGGCAGGAGCAGTTGCAGGAACAGAGGTAG
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protein sequence of NO16G00620.1

>NO16G00620.1-protein ID=NO16G00620.1-protein|Name=NO16G00620.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1199bp
MIENPGGKISSNSYSSSYSNSSMTSNLTIAADARDDTQPNPRPPLTQEVP
TIQMARLALQTQLTQQKQGQQQHQEFMLNQPQPTPSVVFVQKPAHHEQPF
YVLVGSHKLGFACGPYLISALSQLPMEHRIEVLSSMQAWAQHSSDAKDAA
HVKARLTHTLQNLVGASSLSPTYAPFPEHDPAWPLFRTLPFPMRALVEYS
LTPEMLVSRKAAPILRDVHRSGGLPQAEAVLTRFVGKEMMEGVAEAFIGG
GVVDWGVRLTLDKEAGTGFVIKHMGPMGMRGSSTFIHRAVGHDRFMRVQF
GNRRHWWSERGRHALQVLAQEGIHFACRRYKYINHKSDRNGVCYFVAEDS
TGKEETGFRVMSAQCMIAGLGNFFNFPCVPRLVARVALGFSRSQSLSLEP
RQIELINDIFASEDSAVMTDGSGFISPDLVSHLPPHLYQGRALPAAPLIG
PSLAVPPFAVIQVRVICHMGGFKGTLLVHPRLQNKIQLRRSSMLKFPPPN
LSVTPLTRRPSLDVLTTFRVLKASTRLSRELVLILQALEVPDTVFIKLVE
DELSLLRSACTDAEQAAALLRRSSSTLIRSSAEWQVAEMLKAGHGVNEAY
IRKTLLGLRSRALVKLQQGRVFCPSSLYVVGQPDPLGVLKPDEVYVSHGL
PTGYEGLPEGGTEDGVYEGKVLLARHPIYNPAHVQAFQAVKQPALQAFLG
PRAGVLFFSVQGTPSPASRLSEGDMDGDTYFVCMHKDIVSFARPIHVQKM
ERSKSRGSSSSSISGGSSAIPAAPSAAPSSPQPPCPGSEMLTVVGPFHFN
AESVGLQVDAAVMKRCLESCMAHGKAHDIVASASDWWLRHADLRGACSSN
CLILGEIAARALDSAKTGLLWSLPTVLKPAHRPSYLDRSGWSSSSAFSSS
SLSSYHRVLSYSEVDTLLGRIHARVAPLLADDKSSSSSSTTTSSSSSMRG
GKKNVTYSSGGGNAFISPADTLRLDSDLRVEGSAAFLEQAQSWLKAYRQS
YARRMGRRYHAQQQQRQQQQQQNDDPGEYQALKSEVLAPFKQAFLATARA
SGGDKMTSANKRGDEEEGIGAGGEERRPLQLLADNTLPTKAEATVTVGDK
NNENSRVPATTVKTTTTTTTSGESGNINSRFDRRRLAVASAIYEVTYMSG
STLSFVWDTVMHELNHVKKTALARREVAEKEIGEAIVAVRQEQLQEQR*
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Synonyms
Publications