NO16G00030.1, NO16G00030.1 (mRNA) Nannochloropsis oceanica

Overview
NameNO16G00030.1
Unique NameNO16G00030.1
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length666
Alignment locationchr16:2824..4669 -

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Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr16genomechr16:2824..4669 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO16G00030.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO16G00030NO16G00030Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO16G00030.1NO16G00030.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO16G00030.1.cds1NO16G00030.1.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO16G00030.1.cds2NO16G00030.1.cds2Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO16G00030.1.cds3NO16G00030.1.cds3Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO16G00030.1.cds4NO16G00030.1.cds4Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO16G00030.1 ID=NO16G00030.1|Name=NO16G00030.1|organism=Nannochloropsis oceanica|type=mRNA|length=666bp
ATGGCCTGTGGTTTCTGTGTAGCAAGTAGCAAGGGCGGAAAGGAGAATCA
CGATGGCGCCAGGGGGGATTCTGCTGTACCACAGGACAAGTCTTCAAGGG
AACAATTTGCTTTGAATGCCTGGGACCAGCATCAAATAGAAGCCTACGAT
GTCAAGCACTTTCTGGATGCCGCCGATTCTCACTACCTTCCTCATGTGGA
GCTTTTGTTTGTGTGCTTGGCTATAGTGGGCGTCTTCTGTGGTCTACTAC
TCAACTTTCTGAATGCACGCGCCTGTCAGATCCTGAACCGACCCCAGCCC
GCTGGAGGAGGAGGATGGCGGGGCGGGGAAGAAAGACCTGGAGCGAAGAG
CAACAAGAAAAGGGAGCCATTGCTCCATGAGCAACTCTGCGATTTGAGCC
AGCCGGAAACTACCACGACATGTCCAGTTCTTGGGTTTGTCCTCCGAATA
GTCTTTGCGCTGGTCCACGGCGCCGCCCCCAGAGACCACCTCCGTCCCAG
AGACGGAGGGAGGCAGGGAGGTAAGGGCGGAAGGGACGGAGGAGTGGACG
TGGAGATGCCTCGGGTGGTGACATCGACACGACCTCTGACGGCATTCGCC
CTGCGGATATGGCAGCGCAAGATCGGCCGGTTGGGGTTAACGCCGGGGGA
GGAGGAGGGGAATTAG
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protein sequence of NO16G00030.1

>NO16G00030.1-protein ID=NO16G00030.1-protein|Name=NO16G00030.1|organism=Nannochloropsis oceanica|type=polypeptide|length=222bp
MACGFCVASSKGGKENHDGARGDSAVPQDKSSREQFALNAWDQHQIEAYD
VKHFLDAADSHYLPHVELLFVCLAIVGVFCGLLLNFLNARACQILNRPQP
AGGGGWRGGEERPGAKSNKKREPLLHEQLCDLSQPETTTTCPVLGFVLRI
VFALVHGAAPRDHLRPRDGGRQGGKGGRDGGVDVEMPRVVTSTRPLTAFA
LRIWQRKIGRLGLTPGEEEGN*
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mRNA from alignment at chr16:2824..4669-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO16G00030.1 ID=NO16G00030.1|Name=NO16G00030.1|organism=Nannochloropsis oceanica|type=mRNA|length=1846bp|location=Sequence derived from alignment at chr16:2824..4669- (Nannochloropsis oceanica)
ATGGCCTGTGGTTTCTGTGTAGCAAGTAGCAAGGGCGGAAAGGAGAATCA
CGATGGCGCCAGGGGGGATTCTGCTGTACCACAGGACAAGTCTTCAAGGG
AACAATTTGCTTTGAATGCCTGGGACCAGCATCAAATAGAAGCCTACGAT
GTCAAGCACTTTCTGGATGTAGGTGTACTCAAGTGGTGGCTGCTTAACCG
CGGATAGGGAAGGGATGTATATATATATATATAAGGGCATTATTCGTGTT
GAGCCCGATGGCTTTAGGGAAGTTGGGAAATGGTTTGTGTATATGTTGTG
CATGTATATATTCAAGTGTAAGTAAGATATAGACGTTGTGAATAGAATAA
TGATTCCCAGCCTGAGGTAGAGGCAGTGCTTCATGAAGGTAGACAGGGAG
TGGGGCAAGGATACAGAGGCAATAATAATTTGCTGAATTTGCTTGCTCCC
ACTCGTTTCCCGCTTTTCAACTTCCATACCTCCCTCCCTTTTTCGCTCAG
GCCGCCGATTCTCACTACCTTCCTCATGTGGAGCTTTTGTTTGTGTGCTT
GGCTATAGTGGGCGTCTTCTGTGGTCTACTACTCAACTTTCTGAATGCAC
GGTATGTAGCAAGGGAGGGGATGGAAAGAGTGGAGGAACAGGTAGATCCA
ACCGACCTTTGGCTGTGTCCCGAGCAACTGGTGAGGACTTCTATACCTTC
TTCTTCCTCTGCCCCTTTCATCTCTCACCTCATTCTTTCTACCGCAGCGC
CTGTCAGATCCTGAACCGACCCCAGCCCGCTGGAGGAGGAGGATGGCGGG
GCGGGGAAGAAAGACCTGGAGCGAAGAGCAACAAGAAAAGGGAGCCATTG
CTCCATGAGGTAGTGGAAGGAGTGAAGGTGCCGGTATCTTCTTCTTCTCC
CCCCATCTACGTGTAGGATAGCTTGAATCTGACTTCTGTTAAAGGAAAGG
GCTCTTATGTATGTAAAACCCAGCCATGCATGACAAAACTGTGAGTGTAA
GGTAGAGACATGGATAATAGCAGACGAGGGCAACAGCGTAAGCGCAGGAG
CAAAGGGACGGAAGAAGCGCATGAGGATGGAGGAACCGGTTGTGACTTGT
CCTTCACATTGACATATCACAAAACACAAGGCAGAGGAGCAAGGAGAACA
AAGAAAGAGAGTTATTACGACTTGACTTTTGTTTCCTCCTAAGCAATAGC
AATGTAGTCATGTACCTGTACATTCAGACGGGATAGACGGGTGCAGTGAA
GTGGGTGGCCAGGCCTCTTCTCCAAAGTACTAACAGTACACAAGTAGCAT
TGAATCCCTTGCCTCTCCACTTCTCCATCTCTTCCTCTTGCAGTTATCAC
TTTCCCATAACCTTCTTTACTGGTAGTATTTGGTTCCTTTCGGTCAATTA
ATGGTGGTTTTGCTCGGGGGCGTCAAGCCATAGCAGATAAGAGCTGACAT
GAGCAGCCACTCTTCCTCTTGCTTGAGCTCTTGCGCATAATGAACAAGAA
AATTCCCCTTGCTTTTCCTCGCCCTTGACGACACCCTCCCTCCCCTTGCG
CGCTGCTTCAGCAACTCTGCGATTTGAGCCAGCCGGAAACTACCACGACA
TGTCCAGTTCTTGGGTTTGTCCTCCGAATAGTCTTTGCGCTGGTCCACGG
CGCCGCCCCCAGAGACCACCTCCGTCCCAGAGACGGAGGGAGGCAGGGAG
GTAAGGGCGGAAGGGACGGAGGAGTGGACGTGGAGATGCCTCGGGTGGTG
ACATCGACACGACCTCTGACGGCATTCGCCCTGCGGATATGGCAGCGCAA
GATCGGCCGGTTGGGGTTAACGCCGGGGGAGGAGGAGGGGAATTAG
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Coding sequence (CDS) from alignment at chr16:2824..4669-

>NO16G00030.1 ID=NO16G00030.1|Name=NO16G00030.1|organism=Nannochloropsis oceanica|type=CDS|length=666bp|location=Sequence derived from alignment at chr16:2824..4669- (Nannochloropsis oceanica)
ATGGCCTGTGGTTTCTGTGTAGCAAGTAGCAAGGGCGGAAAGGAGAATCA
CGATGGCGCCAGGGGGGATTCTGCTGTACCACAGGACAAGTCTTCAAGGG
AACAATTTGCTTTGAATGCCTGGGACCAGCATCAAATAGAAGCCTACGAT
GTCAAGCACTTTCTGGATGCCGCCGATTCTCACTACCTTCCTCATGTGGA
GCTTTTGTTTGTGTGCTTGGCTATAGTGGGCGTCTTCTGTGGTCTACTAC
TCAACTTTCTGAATGCACGCGCCTGTCAGATCCTGAACCGACCCCAGCCC
GCTGGAGGAGGAGGATGGCGGGGCGGGGAAGAAAGACCTGGAGCGAAGAG
CAACAAGAAAAGGGAGCCATTGCTCCATGAGCAACTCTGCGATTTGAGCC
AGCCGGAAACTACCACGACATGTCCAGTTCTTGGGTTTGTCCTCCGAATA
GTCTTTGCGCTGGTCCACGGCGCCGCCCCCAGAGACCACCTCCGTCCCAG
AGACGGAGGGAGGCAGGGAGGTAAGGGCGGAAGGGACGGAGGAGTGGACG
TGGAGATGCCTCGGGTGGTGACATCGACACGACCTCTGACGGCATTCGCC
CTGCGGATATGGCAGCGCAAGATCGGCCGGTTGGGGTTAACGCCGGGGGA
GGAGGAGGGGAATTAG
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Synonyms
Publications