NO16G00030, NO16G00030 (gene) Nannochloropsis oceanica

Overview
NameNO16G00030
Unique NameNO16G00030
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1846
Alignment locationchr16:2824..4669 -

Link to JBrowse

Properties
Property NameValue
DescriptionMajor facilitator superfamily
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr16genomechr16:2824..4669 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO16G00030 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniR089ncniR089Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR058ngnoR058Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO16G00030.1NO16G00030.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO16G00030.1NO16G00030.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO16G00030 ID=NO16G00030|Name=NO16G00030|organism=Nannochloropsis oceanica|type=gene|length=1846bp
ATGGCCTGTGGTTTCTGTGTAGCAAGTAGCAAGGGCGGAAAGGAGAATCA
CGATGGCGCCAGGGGGGATTCTGCTGTACCACAGGACAAGTCTTCAAGGG
AACAATTTGCTTTGAATGCCTGGGACCAGCATCAAATAGAAGCCTACGAT
GTCAAGCACTTTCTGGATgtaggtgtactcaagtggtggctgcttaaccg
cggatagggaagggatgtatatatatatatataagggcattattcgtgtt
gagcccgatggctttagggaagttgggaaatggtttgtgtatatgttgtg
catgtatatattcaagtgtaagtaagatatagacgttgtgaatagaataa
tgattcccagcctgaggtagaggcagtgcttcatgaaggtagacagggag
tggggcaaggatacagaggcaataataatttgctgaatttgcttgctccc
actcgtttcccgcttttcaacttccatacctccctccctttttcgctcag
GCCGCCGATTCTCACTACCTTCCTCATGTGGAGCTTTTGTTTGTGTGCTT
GGCTATAGTGGGCGTCTTCTGTGGTCTACTACTCAACTTTCTGAATGCAC
Ggtatgtagcaagggaggggatggaaagagtggaggaacaggtagatcca
accgacctttggctgtgtcccgagcaactggtgaggacttctataccttc
ttcttcctctgcccctttcatctctcacctcattctttctaccgcagCGC
CTGTCAGATCCTGAACCGACCCCAGCCCGCTGGAGGAGGAGGATGGCGGG
GCGGGGAAGAAAGACCTGGAGCGAAGAGCAACAAGAAAAGGGAGCCATTG
CTCCATGAGgtagtggaaggagtgaaggtgccggtatcttcttcttctcc
ccccatctacgtgtaggatagcttgaatctgacttctgttaaaggaaagg
gctcttatgtatgtaaaacccagccatgcatgacaaaactgtgagtgtaa
ggtagagacatggataatagcagacgagggcaacagcgtaagcgcaggag
caaagggacggaagaagcgcatgaggatggaggaaccggttgtgacttgt
ccttcacattgacatatcacaaaacacaaggcagaggagcaaggagaaca
aagaaagagagttattacgacttgacttttgtttcctcctaagcaatagc
aatgtagtcatgtacctgtacattcagacgggatagacgggtgcagtgaa
gtgggtggccaggcctcttctccaaagtactaacagtacacaagtagcat
tgaatcccttgcctctccacttctccatctcttcctcttgcagttatcac
tttcccataaccttctttactggtagtatttggttcctttcggtcaatta
atggtggttttgctcgggggcgtcaagccatagcagataagagctgacat
gagcagccactcttcctcttgcttgagctcttgcgcataatgaacaagaa
aattccccttgcttttcctcgcccttgacgacaccctccctccccttgcg
cgctgcttcagCAACTCTGCGATTTGAGCCAGCCGGAAACTACCACGACA
TGTCCAGTTCTTGGGTTTGTCCTCCGAATAGTCTTTGCGCTGGTCCACGG
CGCCGCCCCCAGAGACCACCTCCGTCCCAGAGACGGAGGGAGGCAGGGAG
GTAAGGGCGGAAGGGACGGAGGAGTGGACGTGGAGATGCCTCGGGTGGTG
ACATCGACACGACCTCTGACGGCATTCGCCCTGCGGATATGGCAGCGCAA
GATCGGCCGGTTGGGGTTAACGCCGGGGGAGGAGGAGGGGAATTAG
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protein sequence of NO16G00030.1

>NO16G00030.1-protein ID=NO16G00030.1-protein|Name=NO16G00030.1|organism=Nannochloropsis oceanica|type=polypeptide|length=222bp
MACGFCVASSKGGKENHDGARGDSAVPQDKSSREQFALNAWDQHQIEAYD
VKHFLDAADSHYLPHVELLFVCLAIVGVFCGLLLNFLNARACQILNRPQP
AGGGGWRGGEERPGAKSNKKREPLLHEQLCDLSQPETTTTCPVLGFVLRI
VFALVHGAAPRDHLRPRDGGRQGGKGGRDGGVDVEMPRVVTSTRPLTAFA
LRIWQRKIGRLGLTPGEEEGN*
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Synonyms
Publications